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Search of human proteins with 221316566
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|221316566 cysteine and histidine-rich domain-containing
protein 1 isoform a [Homo sapiens]
(332 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|221316566 cysteine and histidine-rich domain-containing prote... 697 0.0
gi|221316570 cysteine and histidine-rich domain-containing prote... 644 0.0
gi|6912438 integrin beta 1 binding protein 2 [Homo sapiens] 302 2e-82
gi|5730041 suppressor of G2 allele of SKP1 isoform b [Homo sapiens] 48 1e-05
gi|195963398 suppressor of G2 allele of SKP1 isoform a [Homo sap... 46 5e-05
gi|57529246 ubiquitin thioesterase 19 [Homo sapiens] 41 0.001
gi|83281438 eukaryotic translation initiation factor 3, subunit ... 40 0.004
gi|164698498 septin 9 isoform b [Homo sapiens] 36 0.042
gi|164698494 septin 9 isoform a [Homo sapiens] 36 0.042
gi|116256489 septin 9 isoform c [Homo sapiens] 36 0.042
gi|194018433 KIAA1841 protein isoform a [Homo sapiens] 35 0.071
gi|194018431 KIAA1841 protein isoform b [Homo sapiens] 35 0.071
gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens] 34 0.16
gi|189491742 ataxin 7 isoform b [Homo sapiens] 33 0.27
gi|4506797 ataxin 7 isoform a [Homo sapiens] 33 0.27
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 33 0.46
gi|153251865 hypothetical protein LOC84226 [Homo sapiens] 33 0.46
gi|33859678 zinc finger protein 416 [Homo sapiens] 33 0.46
gi|164698500 septin 9 isoform e [Homo sapiens] 32 0.60
gi|164698496 septin 9 isoform e [Homo sapiens] 32 0.60
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 32 0.60
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 32 0.79
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 32 1.0
gi|20127519 TPX2, microtubule-associated protein homolog [Homo s... 31 1.3
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 31 1.8
gi|50312664 ubiquitin specific protease 16 isoform b [Homo sapiens] 30 2.3
gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens] 30 2.3
gi|118766347 zinc finger CCCH-type domain containing 6 [Homo sap... 30 2.3
gi|84875541 cytochrome b5 reductase 4 [Homo sapiens] 30 3.0
gi|110611228 utrophin [Homo sapiens] 30 3.0
>gi|221316566 cysteine and histidine-rich domain-containing protein
1 isoform a [Homo sapiens]
Length = 332
Score = 697 bits (1798), Expect = 0.0
Identities = 332/332 (100%), Positives = 332/332 (100%)
Query: 1 MALLCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCT 60
MALLCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCT
Sbjct: 1 MALLCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCT 60
Query: 61 KGRHNSEKPPEPVKPEVKTTEKKELCELKPKFQEHIIQAPKPVEAIKRPSPDEPMTNLEL 120
KGRHNSEKPPEPVKPEVKTTEKKELCELKPKFQEHIIQAPKPVEAIKRPSPDEPMTNLEL
Sbjct: 61 KGRHNSEKPPEPVKPEVKTTEKKELCELKPKFQEHIIQAPKPVEAIKRPSPDEPMTNLEL 120
Query: 121 KISASLKQALDKLKLSSGNEENKKEEDNDEIKIGTSCKNGGCSKTYQGLESLEEVCVYHS 180
KISASLKQALDKLKLSSGNEENKKEEDNDEIKIGTSCKNGGCSKTYQGLESLEEVCVYHS
Sbjct: 121 KISASLKQALDKLKLSSGNEENKKEEDNDEIKIGTSCKNGGCSKTYQGLESLEEVCVYHS 180
Query: 181 GVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTKGKHMWTKKDAGKKVVPCRHDWHQTGGE 240
GVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTKGKHMWTKKDAGKKVVPCRHDWHQTGGE
Sbjct: 181 GVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTKGKHMWTKKDAGKKVVPCRHDWHQTGGE 240
Query: 241 VTISVYAKNSLPELSRVEANSTLLNVHIVFEGEKEFDQNVKLWGVIDVKRSYVTMTATKI 300
VTISVYAKNSLPELSRVEANSTLLNVHIVFEGEKEFDQNVKLWGVIDVKRSYVTMTATKI
Sbjct: 241 VTISVYAKNSLPELSRVEANSTLLNVHIVFEGEKEFDQNVKLWGVIDVKRSYVTMTATKI 300
Query: 301 EITMRKAEPMQWASLELPAAKKQEKQKDATTD 332
EITMRKAEPMQWASLELPAAKKQEKQKDATTD
Sbjct: 301 EITMRKAEPMQWASLELPAAKKQEKQKDATTD 332
>gi|221316570 cysteine and histidine-rich domain-containing protein
1 isoform b [Homo sapiens]
Length = 313
Score = 644 bits (1660), Expect = 0.0
Identities = 313/332 (94%), Positives = 313/332 (94%), Gaps = 19/332 (5%)
Query: 1 MALLCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCT 60
MALLCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKG CT
Sbjct: 1 MALLCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKG-------------------CT 41
Query: 61 KGRHNSEKPPEPVKPEVKTTEKKELCELKPKFQEHIIQAPKPVEAIKRPSPDEPMTNLEL 120
KGRHNSEKPPEPVKPEVKTTEKKELCELKPKFQEHIIQAPKPVEAIKRPSPDEPMTNLEL
Sbjct: 42 KGRHNSEKPPEPVKPEVKTTEKKELCELKPKFQEHIIQAPKPVEAIKRPSPDEPMTNLEL 101
Query: 121 KISASLKQALDKLKLSSGNEENKKEEDNDEIKIGTSCKNGGCSKTYQGLESLEEVCVYHS 180
KISASLKQALDKLKLSSGNEENKKEEDNDEIKIGTSCKNGGCSKTYQGLESLEEVCVYHS
Sbjct: 102 KISASLKQALDKLKLSSGNEENKKEEDNDEIKIGTSCKNGGCSKTYQGLESLEEVCVYHS 161
Query: 181 GVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTKGKHMWTKKDAGKKVVPCRHDWHQTGGE 240
GVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTKGKHMWTKKDAGKKVVPCRHDWHQTGGE
Sbjct: 162 GVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTKGKHMWTKKDAGKKVVPCRHDWHQTGGE 221
Query: 241 VTISVYAKNSLPELSRVEANSTLLNVHIVFEGEKEFDQNVKLWGVIDVKRSYVTMTATKI 300
VTISVYAKNSLPELSRVEANSTLLNVHIVFEGEKEFDQNVKLWGVIDVKRSYVTMTATKI
Sbjct: 222 VTISVYAKNSLPELSRVEANSTLLNVHIVFEGEKEFDQNVKLWGVIDVKRSYVTMTATKI 281
Query: 301 EITMRKAEPMQWASLELPAAKKQEKQKDATTD 332
EITMRKAEPMQWASLELPAAKKQEKQKDATTD
Sbjct: 282 EITMRKAEPMQWASLELPAAKKQEKQKDATTD 313
>gi|6912438 integrin beta 1 binding protein 2 [Homo sapiens]
Length = 347
Score = 302 bits (774), Expect = 2e-82
Identities = 154/322 (47%), Positives = 204/322 (63%), Gaps = 16/322 (4%)
Query: 1 MALLCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCT 60
M+LLC N+GCGQ FDP TN D+C +HPGVP+FHDALKGWSCC++RT DFS+FL+I GCT
Sbjct: 1 MSLLCRNKGCGQHFDPNTNLPDSCCHHPGVPIFHDALKGWSCCRKRTVDFSEFLNIKGCT 60
Query: 61 KGRHNSEKPPEPVKPEVKTTEKKELCELKPKFQEHIIQAPKPVEAIK--RPSPDEPMTNL 118
G H +EK PE +PE T L E KP + PK E ++ RP + P+ L
Sbjct: 61 MGPHCAEKLPEAPQPEGPAT-SSSLQEQKP-----LNVIPKSAETLRRERPKSELPLKLL 114
Query: 119 ELKISASLKQALDKLKLSSGNEENKKEEDNDEIKIGTSCKNGGCSKTYQGLESLEEVCVY 178
L IS +L+ AL++ +L ++ + I+ G+SC+N GC YQG ES C Y
Sbjct: 115 PLNISQALEMALEQKEL----DQEPGAGLDSLIRTGSSCQNPGCDAVYQGPESDATPCTY 170
Query: 179 HSGVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTKGKHMWTKKDAGKKVVPCRHDWHQTG 238
H G P FHEGMK WSCC +T DF FLAQ GC G+H W K + CRHDWHQT
Sbjct: 171 HPGAPRFHEGMKSWSCCGIQTLDFGAFLAQPGCRVGRHDWGK----QLPASCRHDWHQTD 226
Query: 239 GEVTISVYAKNSLPELSRVEANSTLLNVHIVFEGEKEFDQNVKLWGVIDVKRSYVTMTAT 298
V ++VY + LP + V+A+ T L+VHIVF+G + F +KLWGVI+V++S V + +
Sbjct: 227 SLVVVTVYGQIPLPAFNWVKASQTELHVHIVFDGNRVFQAQMKLWGVINVEQSSVFLMPS 286
Query: 299 KIEITMRKAEPMQWASLELPAA 320
++EI++ KA+P WA LE P A
Sbjct: 287 RVEISLVKADPGSWAQLEHPDA 308
>gi|5730041 suppressor of G2 allele of SKP1 isoform b [Homo sapiens]
Length = 333
Score = 48.1 bits (113), Expect = 1e-05
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 175 VCVYH-----SGVPIFHEGMKYWSCCRRKTSDFNTFL-----AQEGCTKGKHMWTKKDAG 224
+C YH + + F EG K S ++F+ ++ AQ G +WT +
Sbjct: 87 ICEYHEKNYAAALETFTEGQKLDSA----DANFSVWIKRCQEAQNGSES--EVWTHQSKI 140
Query: 225 KKVVPCRHDWHQTGGEVTISVYAKNSLPELSRVEANSTLLNVHIVFEGEKEFDQNVKLWG 284
K +DW+QT +V I++ KN VE + L+ + ++++ ++L
Sbjct: 141 K------YDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLH 194
Query: 285 VIDVKRSYVTMTATKIEITMRKAEPMQWASLE 316
I ++S + +TKIEI ++K E ++W LE
Sbjct: 195 PIIPEQSTFKVLSTKIEIKLKKPEAVRWEKLE 226
>gi|195963398 suppressor of G2 allele of SKP1 isoform a [Homo
sapiens]
Length = 365
Score = 45.8 bits (107), Expect = 5e-05
Identities = 24/86 (27%), Positives = 47/86 (54%)
Query: 231 RHDWHQTGGEVTISVYAKNSLPELSRVEANSTLLNVHIVFEGEKEFDQNVKLWGVIDVKR 290
++DW+QT +V I++ KN VE + L+ + ++++ ++L I ++
Sbjct: 173 KYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIPEQ 232
Query: 291 SYVTMTATKIEITMRKAEPMQWASLE 316
S + +TKIEI ++K E ++W LE
Sbjct: 233 STFKVLSTKIEIKLKKPEAVRWEKLE 258
>gi|57529246 ubiquitin thioesterase 19 [Homo sapiens]
Length = 1318
Score = 41.2 bits (95), Expect = 0.001
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 13/104 (12%)
Query: 231 RHDWHQTGGE-VTISVYAKNSLPELSRV---EANSTL---------LNVHIVFEGEKEFD 277
++D ++ G + V + VY K + SRV E + TL L +H F
Sbjct: 286 KNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFR 345
Query: 278 QNVKLWGVIDVKRSYVTMTATKIEITMRKAEPMQWASLELPAAK 321
VKL +I+ ++ TA++I+I +RK + +W LE PAA+
Sbjct: 346 WQVKLRNLIEPEQCTFCFTASRIDICLRKRQSQRWGGLEAPAAR 389
>gi|83281438 eukaryotic translation initiation factor 3, subunit 1
alpha, 35kDa [Homo sapiens]
Length = 258
Score = 39.7 bits (91), Expect = 0.004
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 11/83 (13%)
Query: 65 NSEKPPEPVKPEVKTTEKKELCELKPKFQEHIIQAPKPVEAIKR--PSPDEPMTNLELKI 122
+ +K VKPEVK +EKK++ E K +E Q K E IK+ P+EP K+
Sbjct: 57 DEKKEEAEVKPEVKISEKKKIAE---KIKEKERQQKKRQEEIKKRLEEPEEP------KV 107
Query: 123 SASLKQALDKLKLSSGNEENKKE 145
+Q DKL+L EE+ E
Sbjct: 108 LTPEEQLADKLRLKKLQEESDLE 130
>gi|164698498 septin 9 isoform b [Homo sapiens]
Length = 579
Score = 36.2 bits (82), Expect = 0.042
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 54 LSIVGCTKGRHNSEKPPEPVKPEVKTTEKKELCELKPKFQEHIIQAPKPVEAIKRPSPDE 113
++IV + H +PP PEV T + PK E IQ PKP EA PSP +
Sbjct: 145 ITIVKPQESAHRRMEPPASKVPEVPTAPATDAA---PKRVE--IQMPKPAEAPTAPSPAQ 199
Query: 114 PMTNLELKISASLKQALD 131
+ N E + L+ L+
Sbjct: 200 TLENSEPAPVSQLQSRLE 217
>gi|164698494 septin 9 isoform a [Homo sapiens]
Length = 586
Score = 36.2 bits (82), Expect = 0.042
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 54 LSIVGCTKGRHNSEKPPEPVKPEVKTTEKKELCELKPKFQEHIIQAPKPVEAIKRPSPDE 113
++IV + H +PP PEV T + PK E IQ PKP EA PSP +
Sbjct: 152 ITIVKPQESAHRRMEPPASKVPEVPTAPATDAA---PKRVE--IQMPKPAEAPTAPSPAQ 206
Query: 114 PMTNLELKISASLKQALD 131
+ N E + L+ L+
Sbjct: 207 TLENSEPAPVSQLQSRLE 224
>gi|116256489 septin 9 isoform c [Homo sapiens]
Length = 568
Score = 36.2 bits (82), Expect = 0.042
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 54 LSIVGCTKGRHNSEKPPEPVKPEVKTTEKKELCELKPKFQEHIIQAPKPVEAIKRPSPDE 113
++IV + H +PP PEV T + PK E IQ PKP EA PSP +
Sbjct: 134 ITIVKPQESAHRRMEPPASKVPEVPTAPATDAA---PKRVE--IQMPKPAEAPTAPSPAQ 188
Query: 114 PMTNLELKISASLKQALD 131
+ N E + L+ L+
Sbjct: 189 TLENSEPAPVSQLQSRLE 206
>gi|194018433 KIAA1841 protein isoform a [Homo sapiens]
Length = 718
Score = 35.4 bits (80), Expect = 0.071
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 9/73 (12%)
Query: 162 CSKTYQGLESLE-EVCVYHSGVPIFHE--------GMKYWSCCRRKTSDFNTFLAQEGCT 212
CS+ YQ +E C YHS ++ G + CC +K F+ +GC
Sbjct: 399 CSRCYQAFLCIEFSHCQYHSETVVYPTAASSLNTVGTGIYPCCNQKVLRFDPTQLTKGCK 458
Query: 213 KGKHMWTKKDAGK 225
HM T +D G+
Sbjct: 459 VRDHMVTLRDQGE 471
>gi|194018431 KIAA1841 protein isoform b [Homo sapiens]
Length = 707
Score = 35.4 bits (80), Expect = 0.071
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 9/73 (12%)
Query: 162 CSKTYQGLESLE-EVCVYHSGVPIFHE--------GMKYWSCCRRKTSDFNTFLAQEGCT 212
CS+ YQ +E C YHS ++ G + CC +K F+ +GC
Sbjct: 399 CSRCYQAFLCIEFSHCQYHSETVVYPTAASSLNTVGTGIYPCCNQKVLRFDPTQLTKGCK 458
Query: 213 KGKHMWTKKDAGK 225
HM T +D G+
Sbjct: 459 VRDHMVTLRDQGE 471
>gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens]
Length = 1312
Score = 34.3 bits (77), Expect = 0.16
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 71 EPVKPEVKTTEKKELCELKPKF--QEHIIQAPKPVEAIKRPSPDEPMTNLELKISASLKQ 128
E +KP + + KK L E P QE + KP + D+ T ++ S ++K
Sbjct: 463 ENIKPSLGS--KKNLLESIPTHSDQEKEVNIKKPEDNENLDDKDDDTTRVDE--SLNIKV 518
Query: 129 ALDKLKLSSGNEENKKEEDNDE 150
++ K SG+E NK+E+++DE
Sbjct: 519 EAEEEKAKSGDETNKEEDEDDE 540
>gi|189491742 ataxin 7 isoform b [Homo sapiens]
Length = 945
Score = 33.5 bits (75), Expect = 0.27
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 20/88 (22%)
Query: 111 PDEPMTNL--ELKISASLKQALDKLKLSSGNEEN-------------KKEEDNDEIKIGT 155
P PM+ +LK S SL+ K SSGN N KK +++ + + +
Sbjct: 663 PSSPMSRKPQKLKSSKSLRP-----KESSGNSTNCQNASSSTSGGSGKKRKNSSPLLVHS 717
Query: 156 SCKNGGCSKTYQGLESLEEVCVYHSGVP 183
S + S + +ES + CV HSG P
Sbjct: 718 SSSSSSSSSSSHSMESFRKNCVAHSGPP 745
>gi|4506797 ataxin 7 isoform a [Homo sapiens]
Length = 892
Score = 33.5 bits (75), Expect = 0.27
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 20/88 (22%)
Query: 111 PDEPMTNL--ELKISASLKQALDKLKLSSGNEEN-------------KKEEDNDEIKIGT 155
P PM+ +LK S SL+ K SSGN N KK +++ + + +
Sbjct: 663 PSSPMSRKPQKLKSSKSLRP-----KESSGNSTNCQNASSSTSGGSGKKRKNSSPLLVHS 717
Query: 156 SCKNGGCSKTYQGLESLEEVCVYHSGVP 183
S + S + +ES + CV HSG P
Sbjct: 718 SSSSSSSSSSSHSMESFRKNCVAHSGPP 745
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 32.7 bits (73), Expect = 0.46
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 67 EKPPEPVKPEVKTTEKKELCELKPKFQEHIIQAPKPVEAIKRPSPDEPMTNLELKISASL 126
E PP+ VK EVK EKKE+ + + + ++ I + PK + P E K A+L
Sbjct: 703 ETPPKEVKKEVKKEEKKEVKKEEKEPKKEIKKLPKDAKKSSTPLS-------EAKKPAAL 755
Query: 127 KQALDKLKLSSGNEENKKEEDNDEIKIGTSCKNG 160
K + K + S + + ++ KI K G
Sbjct: 756 KPKVPKKEESVKKDSVAAGKPKEKGKIKVIKKEG 789
>gi|153251865 hypothetical protein LOC84226 [Homo sapiens]
Length = 1984
Score = 32.7 bits (73), Expect = 0.46
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 89 KPKFQEHIIQA---PKPVEAIKRPSPDEPMTN-LELKISASLKQALDKLKLSSGNEENKK 144
+P QE I+ A P P +K P T+ E + KQ L +K + E K
Sbjct: 637 RPHLQELIVPAELTPSPCTQVKSAELTSPQTSPFEEHTILTHKQGLQAVKSTVIKTEPPK 696
Query: 145 EEDNDEIKIGTSCKNGGCSK 164
+ +++ +G C+N C K
Sbjct: 697 VMETEDLNLGHVCQNRDCQK 716
>gi|33859678 zinc finger protein 416 [Homo sapiens]
Length = 594
Score = 32.7 bits (73), Expect = 0.46
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 185 FHEGMKY--WSCCRRKTSDFNTFLAQEGCTKGKHMWTKKDAGK 225
FH G+ + WS CRR++S +TF CT GK ++ GK
Sbjct: 208 FHVGISHYKWSQCRRESSHKHTFFHPRVCT-GKRLYESSKCGK 249
>gi|164698500 septin 9 isoform e [Homo sapiens]
Length = 422
Score = 32.3 bits (72), Expect = 0.60
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 68 KPPEPVKPEVKTTEKKELCELKPKFQEHIIQAPKPVEAIKRPSPDEPMTNLELKISASLK 127
+PP PEV T + PK E IQ PKP EA PSP + + N E + L+
Sbjct: 2 EPPASKVPEVPTAPATDAA---PKRVE--IQMPKPAEAPTAPSPAQTLENSEPAPVSQLQ 56
Query: 128 QALD 131
L+
Sbjct: 57 SRLE 60
>gi|164698496 septin 9 isoform e [Homo sapiens]
Length = 422
Score = 32.3 bits (72), Expect = 0.60
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 68 KPPEPVKPEVKTTEKKELCELKPKFQEHIIQAPKPVEAIKRPSPDEPMTNLELKISASLK 127
+PP PEV T + PK E IQ PKP EA PSP + + N E + L+
Sbjct: 2 EPPASKVPEVPTAPATDAA---PKRVE--IQMPKPAEAPTAPSPAQTLENSEPAPVSQLQ 56
Query: 128 QALD 131
L+
Sbjct: 57 SRLE 60
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 32.3 bits (72), Expect = 0.60
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 67 EKPPEPVKPEVKTTEKKELCELKPKFQEHIIQAPKPVEAIKRPSPDEPMTNLELKISASL 126
EK PVK EVK+ EK + LK + + PK E +K P +E E+K+
Sbjct: 783 EKAKSPVKEEVKSPEKAK-SPLKEDAKAPEKEIPKK-EEVKSPVKEEEKPQ-EVKVKEPP 839
Query: 127 KQALDKLKLSSGNEENKKEEDNDE 150
K+A ++ ++ E KK+ +E
Sbjct: 840 KKAEEEKAPATPKTEEKKDSKKEE 863
Score = 29.6 bits (65), Expect = 3.9
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 12/96 (12%)
Query: 60 TKGRHNSEKPPEPVK--PEVKTTEKKELCELKPKFQEHIIQAPKPVEAIKRPSPD-EPMT 116
T+ + +S+K P K P+ K EKKE KPK + + + + K P+P+ E
Sbjct: 853 TEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPA 912
Query: 117 NLELKISASLKQALDKLKLSSGNEENKKEEDNDEIK 152
+E+K A K+ E KKE D+ + K
Sbjct: 913 KVEVKEDAKPKEK---------TEVAKKEPDDAKAK 939
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 32.0 bits (71), Expect = 0.79
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 19/136 (13%)
Query: 58 GCTKGRHNSEK----------PPE-PVKPEVKTT--EKKELCELKP-----KFQEHIIQA 99
G +K R N E+ PPE P++P+ + T E+KE E K + +E + +
Sbjct: 1255 GLSKWRQNKERKTGFKLNLYTPPETPMEPDEQVTVEEQKETSEGKTSPSPIRIEEEVKET 1314
Query: 100 PKPVEAIKRPSPDEPMTNLELKISASLKQALDKLKLSSGNEENKKEEDNDEIKIGTSCKN 159
+ + + +E + S K D +K EE ++EE+ +E + G +
Sbjct: 1315 GEALLPQEENRREETCAPVSPNTSPGEKPEDDLIKPEEEEEEEEEEEEEEEEEEGEEEEG 1374
Query: 160 GG-CSKTYQGLESLEE 174
GG K G +S E+
Sbjct: 1375 GGNVEKDPDGAKSQEK 1390
Score = 29.6 bits (65), Expect = 3.9
Identities = 19/84 (22%), Positives = 40/84 (47%)
Query: 67 EKPPEPVKPEVKTTEKKELCELKPKFQEHIIQAPKPVEAIKRPSPDEPMTNLELKISASL 126
E+ PV P EK E +KP+ +E + + E + +E N+E +
Sbjct: 1327 EETCAPVSPNTSPGEKPEDDLIKPEEEEEEEEEEEEEEEEEEGEEEEGGGNVEKDPDGAK 1386
Query: 127 KQALDKLKLSSGNEENKKEEDNDE 150
Q ++ ++S+ E++ + +D++E
Sbjct: 1387 SQEKEEPEISTEKEDSARLDDHEE 1410
>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
Length = 1684
Score = 31.6 bits (70), Expect = 1.0
Identities = 24/88 (27%), Positives = 40/88 (45%)
Query: 66 SEKPPEPVKPEVKTTEKKELCELKPKFQEHIIQAPKPVEAIKRPSPDEPMTNLELKISAS 125
+EK + K + T EL EL+ + Q+ Q K ++ ++ D T L A
Sbjct: 1105 AEKLQKEQKIKEHATTVNELEELQVQLQKEKKQLQKTMQELELVKKDAQQTTLMNMEIAD 1164
Query: 126 LKQALDKLKLSSGNEENKKEEDNDEIKI 153
++ + +L N+ NK E+ EIKI
Sbjct: 1165 YERLMKELNQKLTNKNNKIEDLEQEIKI 1192
Score = 30.8 bits (68), Expect = 1.8
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 49 DFSDFLSIVGCTKGRHNSEKPPEPVKPEVKTTEKKELCELKPKFQEHIIQAPKPVEAIKR 108
D + L VG + + N EK + + K E ++ E+K +E ++Q + ++
Sbjct: 778 DVVNVLQAVGESLAKINEEKCNLAFQRDEKVLELEK--EIKCLQEESVVQCEELKSLLRD 835
Query: 109 PSPDEPMTNLELKISASLKQAL--DKLKLSSGNEENKKEEDNDEIKIGTSCKNGGCSKT 165
++ + EL+ S K+AL D L++ + NE+ + E N I++ + CSK+
Sbjct: 836 YEQEKVLLRKELEEIQSEKEALQSDLLEMKNANEKTRLENQNLLIQVEEVSQT--CSKS 892
>gi|20127519 TPX2, microtubule-associated protein homolog [Homo
sapiens]
Length = 747
Score = 31.2 bits (69), Expect = 1.3
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Query: 59 CTKGRHNSEKPPEPVKPEVKTTEKKELCELKPKFQEHIIQAPKPVEAIKRPSPDEPMTNL 118
C K R N+ EP P+ EKK + E ++Q P + KR + +
Sbjct: 624 CFKARPNTVISQEPFVPK---KEKKSVAE---GLSGSLVQEPFQLATEKRAKERQELEKR 677
Query: 119 ELKISASLKQALDKLKLSSGNEENKKEE 146
++ A Q L++ +L EE KKEE
Sbjct: 678 MAEVEAQKAQQLEEARLQ--EEEQKKEE 703
Score = 28.9 bits (63), Expect = 6.7
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 61 KGRHNSEKPPEPVKPEVKTTEKKELCELKPKFQEHIIQAPKPVEAIKR---PSPDEPMTN 117
KGRH P + +K+TE++EL E K Q+ +++ K E K+ +P+
Sbjct: 191 KGRHTVPCMPPAKQKFLKSTEEQEL-EKSMKMQQEVVEMRKKNEEFKKLALAGIGQPVKK 249
Query: 118 LELKISASLK---QALDKLKLSSGNEENKKE 145
+++ S+ + +++K N+E KE
Sbjct: 250 SVSQVTKSVDFHFRTDERIKQHPKNQEEYKE 280
>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
Length = 1411
Score = 30.8 bits (68), Expect = 1.8
Identities = 19/78 (24%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 76 EVKTTEKKELCELKPKFQEHIIQAPKPVEAIKRPSPDEPMTNLELKISA-SLKQALDKLK 134
E+K ++KE+ +L + + H +++ K + +K LEL+ A SLK A+++ K
Sbjct: 1131 EIKCRQEKEITKLNEELKSHKLESIKEITNLKDAKQLLIQQKLELQGKADSLKAAVEQEK 1190
Query: 135 LSSGNEENKKEEDNDEIK 152
+ +++ +++ +E+K
Sbjct: 1191 RNQQILKDQVKKEEEELK 1208
>gi|50312664 ubiquitin specific protease 16 isoform b [Homo sapiens]
Length = 822
Score = 30.4 bits (67), Expect = 2.3
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 16/92 (17%)
Query: 105 AIKRPSPDEPMTNLELKISASLKQALDKLKLSSGNEENKKEEDNDEIKIGTSCKNGGCSK 164
+I P P++ N+EL+ KL+ S NE+ +++++N + N C
Sbjct: 143 SITTPKPEKDNGNIELENK--------KLEKESKNEQEREKKEN--MAKENPPMNSPCQI 192
Query: 165 TYQGLESLEEVCVYH------SGVPIFHEGMK 190
T +GL +L C ++ S P+ E +K
Sbjct: 193 TVKGLSNLGNTCFFNAVMQNLSQTPVLRELLK 224
>gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens]
Length = 1946
Score = 30.4 bits (67), Expect = 2.3
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 92 FQEHIIQAPKPVEAIKRPSPDEPMTNLELKISA---SLKQALD---KLKLSSGNEENKKE 145
FQ +++A +E K DE + N K SL+ +LD K ++ + K E
Sbjct: 1573 FQLELLEAKAELER-KLSEKDEEIENFRRKQQCTIDSLQSSLDSEAKSRIEVTRLKKKME 1631
Query: 146 EDNDEIKIGTSCKNGGCSKTYQGLESLE 173
ED +E+++ SC N S+ + L L+
Sbjct: 1632 EDLNEMELQLSCANRQVSEATKSLGQLQ 1659
>gi|118766347 zinc finger CCCH-type domain containing 6 [Homo
sapiens]
Length = 1189
Score = 30.4 bits (67), Expect = 2.3
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 82 KKELCELKPKFQEHIIQAPKPVEAIKRPSPDEPMTNLELKI 122
K ++ KP F +HI+ AP+ + + P PD P++++ L +
Sbjct: 863 KMDITLTKPNFAKHIVWAPEDLLPVPLPKPD-PVSSINLPL 902
>gi|84875541 cytochrome b5 reductase 4 [Homo sapiens]
Length = 521
Score = 30.0 bits (66), Expect = 3.0
Identities = 26/100 (26%), Positives = 38/100 (38%), Gaps = 24/100 (24%)
Query: 232 HDWHQTGGEVTISVYAKNSLPELSRVEAN-------------STLLNVHIVFEGEKEFDQ 278
+DW QT VTI++Y K L + + L +HI E + D
Sbjct: 170 YDWFQTDSLVTIAIYTKQKDINLDSIIVDHQNDSFRAETIIKDCLYLIHIGLSHEVQEDF 229
Query: 279 NVKLWGVIDVKRSYVTMTATKIEITMRKAEPMQWASLELP 318
+V+ V + KIEI ++K E W L P
Sbjct: 230 SVR-----------VVESVGKIEIVLQKKENTSWDFLGHP 258
>gi|110611228 utrophin [Homo sapiens]
Length = 3433
Score = 30.0 bits (66), Expect = 3.0
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Query: 81 EKKELCELKPKFQEHIIQAPKPVEAIKRPSPDEPMTNLELKISASLKQALDKLKLSSGNE 140
++KE L Q + A +P+EA P+EP NL+ K + ++ K+ + +
Sbjct: 2610 KEKEYSVLNAVDQARVFLADQPIEA-----PEEPRRNLQSKTELTPEERAQKIAKAMRKQ 2664
Query: 141 ENKKEEDNDEIKIGTSCKNGGCSKTYQGLESLE 173
++ +E + + TS K + L L+
Sbjct: 2665 SSEVKEKWESLNAVTSNWQKQVDKALEKLRDLQ 2697
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.131 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,436,918
Number of Sequences: 37866
Number of extensions: 723418
Number of successful extensions: 1948
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 1895
Number of HSP's gapped (non-prelim): 91
length of query: 332
length of database: 18,247,518
effective HSP length: 103
effective length of query: 229
effective length of database: 14,347,320
effective search space: 3285536280
effective search space used: 3285536280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.