Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZNF416 Sequence: fasta or formatted (594aa) NCBI GI: 33859678
Description:

zinc finger protein 416

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         25           3
 C cysteine            6.7         40           3
 D aspartate           2.9         17           1
 E glutamate           8.2         49           2
 F phenylalanine       4.9         29           2
 G glycine             7.4         44           1
 H histidine           6.4         38           2
 I isoleucine          3.4         20           1
 K lysine              6.6         39           1
 L leucine             6.6         39           2
 M methionine          1.3          8           1
 N asparagine          1.2          7           1
 P proline             4.7         28           1
 Q glutamine           5.9         35           1
 R arginine            6.1         36           2
 S serine              9.1         54           2
 T threonine           5.7         34           2
 V valine              5.4         32           2
 W tryptophan          0.5          3           1
 Y tyrosine            2.9         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 416 
ZNF211                0.496   zinc finger protein 211 isoform 1 
ZNF418                0.493   zinc finger protein 418 
ZNF256                0.489   zinc finger protein 256 
ZNF551                0.488   zinc finger protein 551 
ZNF530                0.486   zinc finger protein 530 
ZNF211                0.483   zinc finger protein 211 isoform 2 
ZIK1                  0.477   zinc finger protein interacting with K protein 1 [Ho...
ZNF132                0.471   zinc finger protein 132 
ZNF304                0.457   zinc finger protein 304 
ZNF17                 0.457   zinc finger protein 17 
ZNF814                0.454   zinc finger protein 814 
ZNF587                0.430   zinc finger protein 587 
ZNF417                0.430   zinc finger protein 417 
LOC100293516          0.430   PREDICTED: similar to zinc finger protein 587 [Homo...
LOC100288322          0.428   PREDICTED: similar to zinc finger protein 587 [Homo...
LOC100288322          0.428   PREDICTED: hypothetical protein XP_002343703 
ZNF549                0.423   zinc finger protein 549 
ZNF792                0.413   zinc finger protein 792 
ZNF776                0.411   zinc finger protein 776 
ZNF749                0.396   zinc finger protein 749 
ZNF548                0.392   zinc finger protein 548 
ZNF569                0.386   zinc finger protein 569 
ZNF568                0.385   zinc finger protein 568 
ZNF420                0.377   zinc finger protein 420 
ZNF665                0.375   zinc finger protein 665 
ZNF30                 0.370   zinc finger protein 30 isoform a 
ZNF30                 0.370   zinc finger protein 30 isoform a 
ZNF30                 0.370   zinc finger protein 30 isoform b 
ZNF135                0.369   zinc finger protein 135 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press