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Search of human proteins with 221136753
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|221136753 chromodomain protein, Y chromosome-like isoform d
[Homo sapiens]
(412 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|221307494 chromodomain protein, Y chromosome-like isoform a [... 815 0.0
gi|221136756 chromodomain protein, Y chromosome-like isoform d [... 815 0.0
gi|221136753 chromodomain protein, Y chromosome-like isoform d [... 815 0.0
gi|25453481 Y chromosome chromodomain protein 1, telomeric isofo... 521 e-148
gi|51538573 chromodomain protein, Y-linked, 1B isoform a [Homo s... 521 e-148
gi|49355787 Y chromosome chromodomain protein 2B [Homo sapiens] 520 e-147
gi|4757968 Y chromosome chromodomain protein 2A [Homo sapiens] 520 e-147
gi|4757966 Y chromosome chromodomain protein 1, telomeric isofor... 508 e-144
gi|51538581 chromodomain protein, Y-linked, 1B isoform b [Homo s... 508 e-144
gi|116235487 chromodomain protein, Y-like 2 [Homo sapiens] 399 e-111
gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom... 189 4e-48
gi|45643121 peroxisomal D3,D2-enoyl-CoA isomerase isoform 2 [Hom... 172 7e-43
gi|70995211 peroxisomal enoyl-coenzyme A hydratase-like protein ... 88 2e-17
gi|194097323 mitochondrial short-chain enoyl-coenzyme A hydratas... 87 2e-17
gi|31542718 enoyl Coenzyme A hydratase domain containing 3 [Homo... 85 1e-16
gi|4502327 AU RNA binding protein/enoyl-Coenzyme A hydratase pre... 67 2e-11
gi|20127408 mitochondrial trifunctional protein, alpha subunit p... 67 4e-11
gi|68989263 enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A... 59 1e-08
gi|157694516 enoyl Coenzyme A hydratase domain containing 1 isof... 57 4e-08
gi|213417737 enoyl Coenzyme A hydratase domain containing 1 isof... 57 4e-08
gi|157694520 enoyl Coenzyme A hydratase domain containing 1 isof... 53 4e-07
gi|150378541 enoyl Coenzyme A hydratase domain containing 2 [Hom... 43 6e-04
gi|37594469 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2 [... 40 0.004
gi|37594471 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1 [... 40 0.004
gi|166235140 seizure related 6 homolog (mouse)-like 2 isoform 4 ... 33 0.36
gi|166235136 seizure related 6 homolog (mouse)-like 2 isoform 2 ... 33 0.36
gi|241982802 HMG box domain containing 3 [Homo sapiens] 32 1.1
gi|61743954 AHNAK nucleoprotein isoform 1 [Homo sapiens] 32 1.1
gi|55749678 ninein-like [Homo sapiens] 32 1.4
gi|20162554 Kruppel-like factor 14 [Homo sapiens] 31 2.3
>gi|221307494 chromodomain protein, Y chromosome-like isoform a
[Homo sapiens]
Length = 544
Score = 815 bits (2106), Expect = 0.0
Identities = 412/412 (100%), Positives = 412/412 (100%)
Query: 1 MDLAKSGIKILVPKSPVKSRTAVDGFQSESPEKLDPVEQGQEDTVAPEVAAEKPVGALLG 60
MDLAKSGIKILVPKSPVKSRTAVDGFQSESPEKLDPVEQGQEDTVAPEVAAEKPVGALLG
Sbjct: 133 MDLAKSGIKILVPKSPVKSRTAVDGFQSESPEKLDPVEQGQEDTVAPEVAAEKPVGALLG 192
Query: 61 PGAERARMGSRPRIHPLVPQVPGPVTAAMATGLAVNGKGTSPFMDALTANGTTNIQTSVT 120
PGAERARMGSRPRIHPLVPQVPGPVTAAMATGLAVNGKGTSPFMDALTANGTTNIQTSVT
Sbjct: 193 PGAERARMGSRPRIHPLVPQVPGPVTAAMATGLAVNGKGTSPFMDALTANGTTNIQTSVT 252
Query: 121 GVTASKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRKQDGFTHILLSTKSSENNS 180
GVTASKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRKQDGFTHILLSTKSSENNS
Sbjct: 253 GVTASKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRKQDGFTHILLSTKSSENNS 312
Query: 181 LNPEVMREVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAEA 240
LNPEVMREVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAEA
Sbjct: 313 LNPEVMREVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAEA 372
Query: 241 IRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCS 300
IRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCS
Sbjct: 373 IRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCS 432
Query: 301 TVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPV 360
TVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPV
Sbjct: 433 TVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPV 492
Query: 361 VLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDEF 412
VLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDEF
Sbjct: 493 VLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDEF 544
>gi|221136756 chromodomain protein, Y chromosome-like isoform d
[Homo sapiens]
Length = 412
Score = 815 bits (2106), Expect = 0.0
Identities = 412/412 (100%), Positives = 412/412 (100%)
Query: 1 MDLAKSGIKILVPKSPVKSRTAVDGFQSESPEKLDPVEQGQEDTVAPEVAAEKPVGALLG 60
MDLAKSGIKILVPKSPVKSRTAVDGFQSESPEKLDPVEQGQEDTVAPEVAAEKPVGALLG
Sbjct: 1 MDLAKSGIKILVPKSPVKSRTAVDGFQSESPEKLDPVEQGQEDTVAPEVAAEKPVGALLG 60
Query: 61 PGAERARMGSRPRIHPLVPQVPGPVTAAMATGLAVNGKGTSPFMDALTANGTTNIQTSVT 120
PGAERARMGSRPRIHPLVPQVPGPVTAAMATGLAVNGKGTSPFMDALTANGTTNIQTSVT
Sbjct: 61 PGAERARMGSRPRIHPLVPQVPGPVTAAMATGLAVNGKGTSPFMDALTANGTTNIQTSVT 120
Query: 121 GVTASKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRKQDGFTHILLSTKSSENNS 180
GVTASKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRKQDGFTHILLSTKSSENNS
Sbjct: 121 GVTASKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRKQDGFTHILLSTKSSENNS 180
Query: 181 LNPEVMREVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAEA 240
LNPEVMREVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAEA
Sbjct: 181 LNPEVMREVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAEA 240
Query: 241 IRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCS 300
IRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCS
Sbjct: 241 IRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCS 300
Query: 301 TVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPV 360
TVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPV
Sbjct: 301 TVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPV 360
Query: 361 VLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDEF 412
VLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDEF
Sbjct: 361 VLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDEF 412
>gi|221136753 chromodomain protein, Y chromosome-like isoform d
[Homo sapiens]
Length = 412
Score = 815 bits (2106), Expect = 0.0
Identities = 412/412 (100%), Positives = 412/412 (100%)
Query: 1 MDLAKSGIKILVPKSPVKSRTAVDGFQSESPEKLDPVEQGQEDTVAPEVAAEKPVGALLG 60
MDLAKSGIKILVPKSPVKSRTAVDGFQSESPEKLDPVEQGQEDTVAPEVAAEKPVGALLG
Sbjct: 1 MDLAKSGIKILVPKSPVKSRTAVDGFQSESPEKLDPVEQGQEDTVAPEVAAEKPVGALLG 60
Query: 61 PGAERARMGSRPRIHPLVPQVPGPVTAAMATGLAVNGKGTSPFMDALTANGTTNIQTSVT 120
PGAERARMGSRPRIHPLVPQVPGPVTAAMATGLAVNGKGTSPFMDALTANGTTNIQTSVT
Sbjct: 61 PGAERARMGSRPRIHPLVPQVPGPVTAAMATGLAVNGKGTSPFMDALTANGTTNIQTSVT 120
Query: 121 GVTASKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRKQDGFTHILLSTKSSENNS 180
GVTASKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRKQDGFTHILLSTKSSENNS
Sbjct: 121 GVTASKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRKQDGFTHILLSTKSSENNS 180
Query: 181 LNPEVMREVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAEA 240
LNPEVMREVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAEA
Sbjct: 181 LNPEVMREVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAEA 240
Query: 241 IRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCS 300
IRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCS
Sbjct: 241 IRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCS 300
Query: 301 TVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPV 360
TVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPV
Sbjct: 301 TVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPV 360
Query: 361 VLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDEF 412
VLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDEF
Sbjct: 361 VLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDEF 412
>gi|25453481 Y chromosome chromodomain protein 1, telomeric isoform
a [Homo sapiens]
Length = 540
Score = 521 bits (1343), Expect = e-148
Identities = 266/413 (64%), Positives = 328/413 (79%), Gaps = 5/413 (1%)
Query: 1 MDLAKSGIKILVPKSPVKSRTAVDGFQSESPEKLDPVEQGQEDTVAPEVAAEKPV-GALL 59
M++ S I+ L P SP +T V GFQ EKLDP+ Q+DTV +V K + L
Sbjct: 132 MEIINSTIETLAPDSPFDHKT-VSGFQKL--EKLDPIAADQQDTVVFKVTEGKLLRDPLS 188
Query: 60 GPGAERARMGSRPRIHPLVPQVPGPVTAAMATGLAVNGKGTSPFMDALTANGTTNIQTSV 119
PGAE+ + ++ +IHPL+ Q+ G VTA+MATG A KG +D L ANGTT++ TSV
Sbjct: 189 RPGAEQTGIQNKTQIHPLMSQMSGSVTASMATGSATR-KGIVVLIDPLAANGTTDMHTSV 247
Query: 120 TGVTASKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRKQDGFTHILLSTKSSENN 179
V +R DD RDQPF K++ F++R TESA YRDIVV+K+DGFT I+LST+S+E N
Sbjct: 248 PRVKGGQRNITDDSRDQPFIKKMHFTIRLTESASTYRDIVVKKEDGFTQIVLSTRSTEKN 307
Query: 180 SLNPEVMREVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAE 239
+LN EV++E+ +AL++AAADDSKLVL SA GSVFCCGLDF YF++ L ++R S +M +
Sbjct: 308 ALNTEVIKEIVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVD 367
Query: 240 AIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGC 299
I+NFVNTFIQFKKPI+V+VNGPAIGLGASILPLCD+VWANEKAWFQTPYTTFGQSPDGC
Sbjct: 368 TIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGC 427
Query: 300 STVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNP 359
S++ FPK+MG ASANEML++GRKLTA+EAC KGLVSQVF GTFTQEVM++IKELAS NP
Sbjct: 428 SSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNP 487
Query: 360 VVLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDEF 412
+VLEE KALVRCN+K+ELEQANERECEVL+KIW SAQG++SMLKY++ KIDEF
Sbjct: 488 IVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVENKIDEF 540
>gi|51538573 chromodomain protein, Y-linked, 1B isoform a [Homo
sapiens]
Length = 540
Score = 521 bits (1343), Expect = e-148
Identities = 266/413 (64%), Positives = 328/413 (79%), Gaps = 5/413 (1%)
Query: 1 MDLAKSGIKILVPKSPVKSRTAVDGFQSESPEKLDPVEQGQEDTVAPEVAAEKPV-GALL 59
M++ S I+ L P SP +T V GFQ EKLDP+ Q+DTV +V K + L
Sbjct: 132 MEIINSTIETLAPDSPFDHKT-VSGFQKL--EKLDPIAADQQDTVVFKVTEGKLLRDPLS 188
Query: 60 GPGAERARMGSRPRIHPLVPQVPGPVTAAMATGLAVNGKGTSPFMDALTANGTTNIQTSV 119
PGAE+ + ++ +IHPL+ Q+ G VTA+MATG A KG +D L ANGTT++ TSV
Sbjct: 189 RPGAEQTGIQNKTQIHPLMSQMSGSVTASMATGSATR-KGIVVLIDPLAANGTTDMHTSV 247
Query: 120 TGVTASKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRKQDGFTHILLSTKSSENN 179
V +R DD RDQPF K++ F++R TESA YRDIVV+K+DGFT I+LST+S+E N
Sbjct: 248 PRVKGGQRNITDDSRDQPFIKKMHFTIRLTESASTYRDIVVKKEDGFTQIVLSTRSTEKN 307
Query: 180 SLNPEVMREVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAE 239
+LN EV++E+ +AL++AAADDSKLVL SA GSVFCCGLDF YF++ L ++R S +M +
Sbjct: 308 ALNTEVIKEIVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVD 367
Query: 240 AIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGC 299
I+NFVNTFIQFKKPI+V+VNGPAIGLGASILPLCD+VWANEKAWFQTPYTTFGQSPDGC
Sbjct: 368 TIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGC 427
Query: 300 STVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNP 359
S++ FPK+MG ASANEML++GRKLTA+EAC KGLVSQVF GTFTQEVM++IKELAS NP
Sbjct: 428 SSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNP 487
Query: 360 VVLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDEF 412
+VLEE KALVRCN+K+ELEQANERECEVL+KIW SAQG++SMLKY++ KIDEF
Sbjct: 488 IVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVENKIDEF 540
>gi|49355787 Y chromosome chromodomain protein 2B [Homo sapiens]
Length = 541
Score = 520 bits (1338), Expect = e-147
Identities = 264/413 (63%), Positives = 325/413 (78%), Gaps = 4/413 (0%)
Query: 1 MDLAKSGIKILVPKSPVKSRTAVDGFQSESPEKLDPVEQGQEDTVAPEVAAEKPV-GALL 59
M++ S I+ L P SP + V GFQ EKLDP+ Q+DTV +V K + L
Sbjct: 132 MEIINSTIETLAPDSPFDHKKTVSGFQKL--EKLDPIAADQQDTVVFKVTEGKLLRDPLS 189
Query: 60 GPGAERARMGSRPRIHPLVPQVPGPVTAAMATGLAVNGKGTSPFMDALTANGTTNIQTSV 119
PGAE+ + ++ ++HPL+ Q+ G VTA+MATG A KG +D L ANGTT++ TSV
Sbjct: 190 HPGAEQTGIQNKTQMHPLMSQMSGSVTASMATGSATR-KGIVVLIDPLAANGTTDMHTSV 248
Query: 120 TGVTASKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRKQDGFTHILLSTKSSENN 179
V +R DD R QPF K++ F++R TESA YRDIVV+K+DGFT I+LST+S+E N
Sbjct: 249 PRVKGGQRNITDDSRGQPFIKKMHFTIRLTESAITYRDIVVKKEDGFTQIVLSTRSTEKN 308
Query: 180 SLNPEVMREVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAE 239
+LN EV++E+ +AL++AAADDSKLVL SA GSVFCCGLDF YF+R L +DR S +M +
Sbjct: 309 ALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVRHLRNDRNTASLEMVD 368
Query: 240 AIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGC 299
I+NFVNTFIQFKKPI+V+VNGPAIGLGASILPLCD+VWANEKAWFQTPYTTFGQSPDGC
Sbjct: 369 TIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGC 428
Query: 300 STVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNP 359
S++ FPK+MG ASANEML++GRKLTA+EAC KGLVSQVF GTFTQEVM++IKELAS N
Sbjct: 429 SSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNA 488
Query: 360 VVLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDEF 412
+VLEE KALVRCN+K+ELEQANERECEVL+KIW SAQG++SMLKY++ KIDEF
Sbjct: 489 IVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVENKIDEF 541
>gi|4757968 Y chromosome chromodomain protein 2A [Homo sapiens]
Length = 541
Score = 520 bits (1338), Expect = e-147
Identities = 264/413 (63%), Positives = 325/413 (78%), Gaps = 4/413 (0%)
Query: 1 MDLAKSGIKILVPKSPVKSRTAVDGFQSESPEKLDPVEQGQEDTVAPEVAAEKPV-GALL 59
M++ S I+ L P SP + V GFQ EKLDP+ Q+DTV +V K + L
Sbjct: 132 MEIINSTIETLAPDSPFDHKKTVSGFQKL--EKLDPIAADQQDTVVFKVTEGKLLRDPLS 189
Query: 60 GPGAERARMGSRPRIHPLVPQVPGPVTAAMATGLAVNGKGTSPFMDALTANGTTNIQTSV 119
PGAE+ + ++ ++HPL+ Q+ G VTA+MATG A KG +D L ANGTT++ TSV
Sbjct: 190 HPGAEQTGIQNKTQMHPLMSQMSGSVTASMATGSATR-KGIVVLIDPLAANGTTDMHTSV 248
Query: 120 TGVTASKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRKQDGFTHILLSTKSSENN 179
V +R DD R QPF K++ F++R TESA YRDIVV+K+DGFT I+LST+S+E N
Sbjct: 249 PRVKGGQRNITDDSRGQPFIKKMHFTIRLTESAITYRDIVVKKEDGFTQIVLSTRSTEKN 308
Query: 180 SLNPEVMREVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAE 239
+LN EV++E+ +AL++AAADDSKLVL SA GSVFCCGLDF YF+R L +DR S +M +
Sbjct: 309 ALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVRHLRNDRNTASLEMVD 368
Query: 240 AIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGC 299
I+NFVNTFIQFKKPI+V+VNGPAIGLGASILPLCD+VWANEKAWFQTPYTTFGQSPDGC
Sbjct: 369 TIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGC 428
Query: 300 STVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNP 359
S++ FPK+MG ASANEML++GRKLTA+EAC KGLVSQVF GTFTQEVM++IKELAS N
Sbjct: 429 SSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNA 488
Query: 360 VVLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDEF 412
+VLEE KALVRCN+K+ELEQANERECEVL+KIW SAQG++SMLKY++ KIDEF
Sbjct: 489 IVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVENKIDEF 541
>gi|4757966 Y chromosome chromodomain protein 1, telomeric isoform b
[Homo sapiens]
Length = 554
Score = 508 bits (1307), Expect = e-144
Identities = 260/404 (64%), Positives = 320/404 (79%), Gaps = 5/404 (1%)
Query: 1 MDLAKSGIKILVPKSPVKSRTAVDGFQSESPEKLDPVEQGQEDTVAPEVAAEKPV-GALL 59
M++ S I+ L P SP +T V GFQ EKLDP+ Q+DTV +V K + L
Sbjct: 132 MEIINSTIETLAPDSPFDHKT-VSGFQKL--EKLDPIAADQQDTVVFKVTEGKLLRDPLS 188
Query: 60 GPGAERARMGSRPRIHPLVPQVPGPVTAAMATGLAVNGKGTSPFMDALTANGTTNIQTSV 119
PGAE+ + ++ +IHPL+ Q+ G VTA+MATG A KG +D L ANGTT++ TSV
Sbjct: 189 RPGAEQTGIQNKTQIHPLMSQMSGSVTASMATGSATR-KGIVVLIDPLAANGTTDMHTSV 247
Query: 120 TGVTASKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRKQDGFTHILLSTKSSENN 179
V +R DD RDQPF K++ F++R TESA YRDIVV+K+DGFT I+LST+S+E N
Sbjct: 248 PRVKGGQRNITDDSRDQPFIKKMHFTIRLTESASTYRDIVVKKEDGFTQIVLSTRSTEKN 307
Query: 180 SLNPEVMREVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAE 239
+LN EV++E+ +AL++AAADDSKLVL SA GSVFCCGLDF YF++ L ++R S +M +
Sbjct: 308 ALNTEVIKEIVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVD 367
Query: 240 AIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGC 299
I+NFVNTFIQFKKPI+V+VNGPAIGLGASILPLCD+VWANEKAWFQTPYTTFGQSPDGC
Sbjct: 368 TIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGC 427
Query: 300 STVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNP 359
S++ FPK+MG ASANEML++GRKLTA+EAC KGLVSQVF GTFTQEVM++IKELAS NP
Sbjct: 428 SSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNP 487
Query: 360 VVLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLK 403
+VLEE KALVRCN+K+ELEQANERECEVL+KIW SAQG++SMLK
Sbjct: 488 IVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLK 531
>gi|51538581 chromodomain protein, Y-linked, 1B isoform b [Homo
sapiens]
Length = 554
Score = 508 bits (1307), Expect = e-144
Identities = 260/404 (64%), Positives = 320/404 (79%), Gaps = 5/404 (1%)
Query: 1 MDLAKSGIKILVPKSPVKSRTAVDGFQSESPEKLDPVEQGQEDTVAPEVAAEKPV-GALL 59
M++ S I+ L P SP +T V GFQ EKLDP+ Q+DTV +V K + L
Sbjct: 132 MEIINSTIETLAPDSPFDHKT-VSGFQKL--EKLDPIAADQQDTVVFKVTEGKLLRDPLS 188
Query: 60 GPGAERARMGSRPRIHPLVPQVPGPVTAAMATGLAVNGKGTSPFMDALTANGTTNIQTSV 119
PGAE+ + ++ +IHPL+ Q+ G VTA+MATG A KG +D L ANGTT++ TSV
Sbjct: 189 RPGAEQTGIQNKTQIHPLMSQMSGSVTASMATGSATR-KGIVVLIDPLAANGTTDMHTSV 247
Query: 120 TGVTASKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRKQDGFTHILLSTKSSENN 179
V +R DD RDQPF K++ F++R TESA YRDIVV+K+DGFT I+LST+S+E N
Sbjct: 248 PRVKGGQRNITDDSRDQPFIKKMHFTIRLTESASTYRDIVVKKEDGFTQIVLSTRSTEKN 307
Query: 180 SLNPEVMREVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAE 239
+LN EV++E+ +AL++AAADDSKLVL SA GSVFCCGLDF YF++ L ++R S +M +
Sbjct: 308 ALNTEVIKEIVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVD 367
Query: 240 AIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGC 299
I+NFVNTFIQFKKPI+V+VNGPAIGLGASILPLCD+VWANEKAWFQTPYTTFGQSPDGC
Sbjct: 368 TIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGC 427
Query: 300 STVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNP 359
S++ FPK+MG ASANEML++GRKLTA+EAC KGLVSQVF GTFTQEVM++IKELAS NP
Sbjct: 428 SSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNP 487
Query: 360 VVLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLK 403
+VLEE KALVRCN+K+ELEQANERECEVL+KIW SAQG++SMLK
Sbjct: 488 IVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLK 531
>gi|116235487 chromodomain protein, Y-like 2 [Homo sapiens]
Length = 506
Score = 399 bits (1026), Expect = e-111
Identities = 204/319 (63%), Positives = 254/319 (79%), Gaps = 13/319 (4%)
Query: 93 LAVNGKGTSPFMDALTANGTTNIQTSVTGVTASKRKFIDDRRDQPFDKRLRFSVRQTESA 152
LA NG G+ ALT NG N+ + V KRK ++ +D FDKRLR+SVRQ ES
Sbjct: 200 LAENGLGS-----ALT-NGGLNLHSPV------KRK-LEAEKDYVFDKRLRYSVRQNESN 246
Query: 153 YRYRDIVVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADDSKLVLLSAVGSV 212
R+RDIVVRK++GFTHILLS+++S+NN+L PE+M+EV+ AL AA DDSKL+LLSAVGSV
Sbjct: 247 CRFRDIVVRKEEGFTHILLSSQTSDNNALTPEIMKEVRRALCNAATDDSKLLLLSAVGSV 306
Query: 213 FCCGLDFIYFIRRLTDDRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILP 272
FC GLD+ Y I RL+ DR++EST++AEAIR+FV FIQFKKPI+VA+NGPA+GLGASILP
Sbjct: 307 FCSGLDYSYLIGRLSSDRRKESTRIAEAIRDFVKAFIQFKKPIVVAINGPALGLGASILP 366
Query: 273 LCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKG 332
LCD+VWA+EKAWFQTPY T +P GCS+ FP+I+G A ANEML GRKLTAQEAC +G
Sbjct: 367 LCDIVWASEKAWFQTPYATIRLTPAGCSSYTFPQILGVALANEMLFCGRKLTAQEACSRG 426
Query: 333 LVSQVFWPGTFTQEVMVRIKELASCNPVVLEESKALVRCNMKMELEQANERECEVLKKIW 392
LVSQVFWP TF+QEVM+R+KE+ASC+ VVLEESK LVR +K LE NE+EC +LK++W
Sbjct: 427 LVSQVFWPTTFSQEVMLRVKEMASCSAVVLEESKCLVRSFLKSVLEDVNEKECLMLKQLW 486
Query: 393 GSAQGMDSMLKYLQRKIDE 411
S++G+DS+ YLQ KI E
Sbjct: 487 SSSKGLDSLFSYLQDKIYE 505
>gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Homo
sapiens]
Length = 364
Score = 189 bits (480), Expect = 4e-48
Identities = 99/254 (38%), Positives = 150/254 (59%), Gaps = 1/254 (0%)
Query: 155 YRDIVVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADDSKLVLLSAVGSVFC 214
+ +VV +DG T I+ + + + N++N E+ E+ AL A+ DDS + +L+ G +
Sbjct: 109 FETLVVTSEDGITKIMFN-RPKKKNAINTEMYHEIMRALKAASKDDSIITVLTGNGDYYS 167
Query: 215 CGLDFIYFIRRLTDDRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLC 274
G D F + ++ A +R FV FI F KP+I VNGPA+G+ ++L L
Sbjct: 168 SGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLF 227
Query: 275 DVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLV 334
D V+A+++A F TP++ GQSP+GCS+ FPKIM A A EML+ G+KLTA EAC +GLV
Sbjct: 228 DAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLV 287
Query: 335 SQVFWPGTFTQEVMVRIKELASCNPVVLEESKALVRCNMKMELEQANERECEVLKKIWGS 394
++VF TF +EV R+K A P L SK ++R + +L N EC VL+ W S
Sbjct: 288 TEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLS 347
Query: 395 AQGMDSMLKYLQRK 408
+ ++++ +L RK
Sbjct: 348 DECTNAVVNFLSRK 361
>gi|45643121 peroxisomal D3,D2-enoyl-CoA isomerase isoform 2 [Homo
sapiens]
Length = 227
Score = 172 bits (435), Expect = 7e-43
Identities = 90/221 (40%), Positives = 131/221 (59%)
Query: 188 EVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAEAIRNFVNT 247
E+ AL A+ DDS + +L+ G + G D F + ++ A +R FV
Sbjct: 4 EIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGC 63
Query: 248 FIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKI 307
FI F KP+I VNGPA+G+ ++L L D V+A+++A F TP++ GQSP+GCS+ FPKI
Sbjct: 64 FIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKI 123
Query: 308 MGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPVVLEESKA 367
M A A EML+ G+KLTA EAC +GLV++VF TF +EV R+K A P L SK
Sbjct: 124 MSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKE 183
Query: 368 LVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRK 408
++R + +L N EC VL+ W S + ++++ +L RK
Sbjct: 184 VIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRK 224
>gi|70995211 peroxisomal enoyl-coenzyme A hydratase-like protein
[Homo sapiens]
Length = 328
Score = 87.8 bits (216), Expect = 2e-17
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 11/218 (5%)
Query: 159 VVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAAD-DSKLVLLSAVGSVFCCGL 217
V Q H+ L+ + ++ N++N RE+ + + D D + V++S G +F G+
Sbjct: 60 VTSAQKHVLHVQLN-RPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGI 118
Query: 218 DFIYFIRRLT----DDRKRESTKMAEAIRNFVNTFIQFK---KPIIVAVNGPAIGLGASI 270
D + + DD R S + + I + TF + KP+I AV+G IG G +
Sbjct: 119 DLMDMASDILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDL 178
Query: 271 LPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGAS-ANEMLLSGRKLTAQEAC 329
+ CD+ + + A+FQ G + D + PK++G S NE+ + RK+ A EA
Sbjct: 179 VTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEAL 238
Query: 330 GKGLVSQVFWPGTFTQEVMVRI-KELASCNPVVLEESK 366
G GLVS+VF + + + E++S +PV ++ +K
Sbjct: 239 GSGLVSRVFPDKEVMLDAALALAAEISSKSPVAVQSTK 276
>gi|194097323 mitochondrial short-chain enoyl-coenzyme A hydratase 1
precursor [Homo sapiens]
Length = 290
Score = 87.4 bits (215), Expect = 2e-17
Identities = 59/235 (25%), Positives = 117/235 (49%), Gaps = 7/235 (2%)
Query: 179 NSLNPEVMREVQSALSTAAADDSK-LVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKM 237
N+L ++ E+ AL T D + ++L+ F G D + + +
Sbjct: 59 NALCDGLIDELNQALKTFEEDPAVGAIVLTGGDKAFAAGADI-----KEMQNLSFQDCYS 113
Query: 238 AEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPD 297
++ ++++ + Q KKP+I AVNG A G G + +CD+++A EKA F P G P
Sbjct: 114 SKFLKHW-DHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPG 172
Query: 298 GCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASC 357
T + +G + A EM+L+G +++AQ+A GLVS++ T +E + +++AS
Sbjct: 173 AGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVETLVEEAIQCAEKIASN 232
Query: 358 NPVVLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDEF 412
+ +V+ +K V +M L + ++ E ++ + + + M +++++ F
Sbjct: 233 SKIVVAMAKESVNAAFEMTLTEGSKLEKKLFYSTFATDDRKEGMTAFVEKRKANF 287
>gi|31542718 enoyl Coenzyme A hydratase domain containing 3 [Homo
sapiens]
Length = 303
Score = 85.1 bits (209), Expect = 1e-16
Identities = 71/259 (27%), Positives = 125/259 (48%), Gaps = 16/259 (6%)
Query: 156 RDIVVRKQDGFTHILLSTKSSENNSLNPEVMREVQS-ALSTAAADDSKLVLLSAVGSVFC 214
R R+ DG +I+LS + N+L+ +++ +QS L A ++D K++++SA G VF
Sbjct: 46 RPTSARQLDGIRNIVLSNPK-KRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFS 104
Query: 215 CGLDFIYFIRRLTDDRKRESTKMAEAIRNFVNTFIQFKK---PIIVAVNGPAIGLGASIL 271
G D ++ LT+++ R+ AE + + + P+I VNG A G ++
Sbjct: 105 SGHD----LKELTEEQGRDYH--AEVFQTCSKVMMHIRNHPVPVIAMVNGLATAAGCQLV 158
Query: 272 PLCDVVWANEKAWFQTPYTTFGQSPDGCST--VMFPKIMGGASANEMLLSGRKLTAQEAC 329
CD+ A++K+ F TP G CST V + + A EML +G ++AQEA
Sbjct: 159 ASCDIAVASDKSSFATPGVNVGLF---CSTPGVALARAVPRKVALEMLFTGEPISAQEAL 215
Query: 330 GKGLVSQVFWPGTFTQEVMVRIKELASCNPVVLEESKALVRCNMKMELEQANERECEVLK 389
GL+S+V +E M +++AS + V+ KA + +L A + +
Sbjct: 216 LHGLLSKVVPEAELQEETMRIARKIASLSRPVVSLGKATFYKQLPQDLGTAYYLTSQAMV 275
Query: 390 KIWGSAQGMDSMLKYLQRK 408
G + + +LQ++
Sbjct: 276 DNLALRDGQEGITAFLQKR 294
>gi|4502327 AU RNA binding protein/enoyl-Coenzyme A hydratase
precursor [Homo sapiens]
Length = 339
Score = 67.4 bits (163), Expect = 2e-11
Identities = 60/250 (24%), Positives = 106/250 (42%), Gaps = 18/250 (7%)
Query: 137 PFDKRLRFSVRQTESAYRYRDIVVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTA 196
P KR S +TE R R + +++ +L ++ NSL+ +++ + A+
Sbjct: 61 PAPKRGYSSEMKTEDELRVRHL--EEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDAL 118
Query: 197 AADDS--KLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMA---EAIRNFVNTFIQF 251
+D +++ S V +FC G D L + K S+++ IR +N
Sbjct: 119 KSDKKVRTIIIRSEVPGIFCAGAD-------LKERAKMSSSEVGPFVSKIRAVINDIANL 171
Query: 252 KKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGA 311
P I A++G A+G G + CD+ A A T P G T P+ +G +
Sbjct: 172 PVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMS 231
Query: 312 SANEMLLSGRKLTAQEACGKGLVSQVFWPG----TFTQEVMVRIKELASCNPVVLEESKA 367
A E++ S R L +EA GL+S V ++ + +E PV + +K
Sbjct: 232 LAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKL 291
Query: 368 LVRCNMKMEL 377
+ M+++L
Sbjct: 292 AINQGMEVDL 301
>gi|20127408 mitochondrial trifunctional protein, alpha subunit
precursor [Homo sapiens]
Length = 763
Score = 66.6 bits (161), Expect = 4e-11
Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 7/176 (3%)
Query: 169 ILLSTKSSENNSLNPEVMREVQSALSTAAADDS--KLVLLSAVGSVFCCGLDFIYFIRRL 226
+ +++ +S+ N+L+ E+ E ++ A D VL+S+ F G D
Sbjct: 52 VRINSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGADINMLAACK 111
Query: 227 TDDRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCD--VVWANEKAW 284
T +E T++++ + V + KPI+ A+NG +G G + C + + K
Sbjct: 112 T---LQEVTQLSQEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTV 168
Query: 285 FQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWP 340
TP G P T PK++G +A +M+L+GR + A A GLV Q+ P
Sbjct: 169 LGTPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQLVEP 224
>gi|68989263 enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A
dehydrogenase [Homo sapiens]
Length = 723
Score = 58.5 bits (140), Expect = 1e-08
Identities = 50/208 (24%), Positives = 96/208 (46%), Gaps = 17/208 (8%)
Query: 170 LLSTKSSENNSLNPEVMREVQSALSTAAADDS-KLVLLSAVGSVFCCGLDFIYFIRRLTD 228
L+ ++ N+++ ++R+++ L A D + K +++ F G D IR +
Sbjct: 13 LIRLRNPPVNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGAD----IRGFSA 68
Query: 229 DRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTP 288
R T + + V+ + +KP++ A+ G A G G + C A+ +A P
Sbjct: 69 PRTFGLT-----LGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQVGLP 123
Query: 289 YTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVM 348
T G P T + P++ G +A +++ SGR++ A EA G++ +V + E
Sbjct: 124 EVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVV--NSDPVEEA 181
Query: 349 VRIKELASCNPVVLEESKALVRCNMKME 376
+R + S P+ ES+ L CN ++
Sbjct: 182 IRFAQRVSDQPL---ESRRL--CNKPIQ 204
>gi|157694516 enoyl Coenzyme A hydratase domain containing 1 isoform
1 [Homo sapiens]
Length = 301
Score = 56.6 bits (135), Expect = 4e-08
Identities = 53/262 (20%), Positives = 110/262 (41%), Gaps = 7/262 (2%)
Query: 146 VRQTESAYRYRDIVVRKQDGFTHILLSTKSSENNSLNPEVMREV-QSALSTAAADDSKLV 204
V++T + I ++K+D IL S N+ + +M ++ + + + K +
Sbjct: 37 VKKTLQQFPGGSIDLQKEDNGIGILTLNNPSRMNAFSGVMMLQLLEKVIELENWTEGKGL 96
Query: 205 LLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAI 264
++ + F G D + ++ L + + ++N + F++ + V G A+
Sbjct: 97 IVRGAKNTFSSGSD-LNAVKSL--GTPEDGMAVCMFMQNTLTRFMRLPLISVALVQGWAL 153
Query: 265 GLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLT 324
G GA CD ++ + + G P T +I+G A ++L KL
Sbjct: 154 GGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGTTRLVEIIGSRQALKVLSGALKLD 213
Query: 325 AQEACGKGLVSQVFWPGTFT---QEVMVRIKELASCNPVVLEESKALVRCNMKMELEQAN 381
++ A G+V +V T +E +K+ P V+ K V ++ LE+A
Sbjct: 214 SKNALNIGMVEEVLQSSDETKSLEEAQEWLKQFIQGPPEVIRALKKSVCSGRELYLEEAL 273
Query: 382 ERECEVLKKIWGSAQGMDSMLK 403
+ E ++L +WG ++++ K
Sbjct: 274 QNERDLLGTVWGGPANLEAIAK 295
>gi|213417737 enoyl Coenzyme A hydratase domain containing 1 isoform
5 [Homo sapiens]
Length = 307
Score = 56.6 bits (135), Expect = 4e-08
Identities = 53/262 (20%), Positives = 110/262 (41%), Gaps = 7/262 (2%)
Query: 146 VRQTESAYRYRDIVVRKQDGFTHILLSTKSSENNSLNPEVMREV-QSALSTAAADDSKLV 204
V++T + I ++K+D IL S N+ + +M ++ + + + K +
Sbjct: 43 VKKTLQQFPGGSIDLQKEDNGIGILTLNNPSRMNAFSGVMMLQLLEKVIELENWTEGKGL 102
Query: 205 LLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAI 264
++ + F G D + ++ L + + ++N + F++ + V G A+
Sbjct: 103 IVRGAKNTFSSGSD-LNAVKSL--GTPEDGMAVCMFMQNTLTRFMRLPLISVALVQGWAL 159
Query: 265 GLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLT 324
G GA CD ++ + + G P T +I+G A ++L KL
Sbjct: 160 GGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGTTRLVEIIGSRQALKVLSGALKLD 219
Query: 325 AQEACGKGLVSQVFWPGTFT---QEVMVRIKELASCNPVVLEESKALVRCNMKMELEQAN 381
++ A G+V +V T +E +K+ P V+ K V ++ LE+A
Sbjct: 220 SKNALNIGMVEEVLQSSDETKSLEEAQEWLKQFIQGPPEVIRALKKSVCSGRELYLEEAL 279
Query: 382 ERECEVLKKIWGSAQGMDSMLK 403
+ E ++L +WG ++++ K
Sbjct: 280 QNERDLLGTVWGGPANLEAIAK 301
>gi|157694520 enoyl Coenzyme A hydratase domain containing 1 isoform
3 [Homo sapiens]
Length = 226
Score = 53.1 bits (126), Expect = 4e-07
Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 3/166 (1%)
Query: 241 IRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCS 300
++N + F++ + V G A+G GA CD ++ + + G P
Sbjct: 55 MQNTLTRFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGG 114
Query: 301 TVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFT---QEVMVRIKELASC 357
T +I+G A ++L KL ++ A G+V +V T +E +K+
Sbjct: 115 TTRLVEIIGSRQALKVLSGALKLDSKNALNIGMVEEVLQSSDETKSLEEAQEWLKQFIQG 174
Query: 358 NPVVLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLK 403
P V+ K V ++ LE+A + E ++L +WG ++++ K
Sbjct: 175 PPEVIRALKKSVCSGRELYLEEALQNERDLLGTVWGGPANLEAIAK 220
>gi|150378541 enoyl Coenzyme A hydratase domain containing 2 [Homo
sapiens]
Length = 261
Score = 42.7 bits (99), Expect = 6e-04
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 38/173 (21%)
Query: 165 GFTHILLSTKSSENNSLNPEVMREVQSALSTAAADDSKLVLL--SAVGSVFCCGLDFIYF 222
G T IL++ + S N+L + E+ L+ D VLL S V VFC G D
Sbjct: 41 GITEILMN-RPSARNALGNVFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGADL--- 96
Query: 223 IRRLTDDRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEK 282
++RE AE V F+Q + ++ + A+ + L +
Sbjct: 97 -------KEREQMSEAE-----VGVFVQRLRGLMNDIASSAV------MGLIE------- 131
Query: 283 AWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVS 335
TT G P T P+ +G A A E++ +GR+L+ EA GLV+
Sbjct: 132 -------TTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLSGTEAHVLGLVN 177
>gi|37594469 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2
[Homo sapiens]
Length = 338
Score = 40.0 bits (92), Expect = 0.004
Identities = 38/183 (20%), Positives = 72/183 (39%), Gaps = 12/183 (6%)
Query: 159 VVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADDSKLVLL--SAVGSVFCCG 216
V+ ++ G T ++ + N+L ++R++ L D +++ A G FC G
Sbjct: 38 VLLEKKGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAG 97
Query: 217 LDFIYFIRRLTDDRKRESTKMAEAIRN----FVNTFIQFKKPIIVAVNGPAIGLGASILP 272
D R+ + ++ K+A N +KP + ++G +G G +
Sbjct: 98 GDI-----RVISEAEKAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSV 152
Query: 273 LCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKG 332
A EK F P T G PD P++ G + L+G +L ++ G
Sbjct: 153 HGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQ-GKLGYFLALTGFRLKGRDVYRAG 211
Query: 333 LVS 335
+ +
Sbjct: 212 IAT 214
>gi|37594471 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1
[Homo sapiens]
Length = 386
Score = 40.0 bits (92), Expect = 0.004
Identities = 38/183 (20%), Positives = 72/183 (39%), Gaps = 12/183 (6%)
Query: 159 VVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADDSKLVLL--SAVGSVFCCG 216
V+ ++ G T ++ + N+L ++R++ L D +++ A G FC G
Sbjct: 38 VLLEKKGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAG 97
Query: 217 LDFIYFIRRLTDDRKRESTKMAEAIRN----FVNTFIQFKKPIIVAVNGPAIGLGASILP 272
D R+ + ++ K+A N +KP + ++G +G G +
Sbjct: 98 GDI-----RVISEAEKAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSV 152
Query: 273 LCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKG 332
A EK F P T G PD P++ G + L+G +L ++ G
Sbjct: 153 HGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQ-GKLGYFLALTGFRLKGRDVYRAG 211
Query: 333 LVS 335
+ +
Sbjct: 212 IAT 214
>gi|166235140 seizure related 6 homolog (mouse)-like 2 isoform 4
[Homo sapiens]
Length = 809
Score = 33.5 bits (75), Expect = 0.36
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 32 EKLDPVEQGQEDTVAPEVAAEKPVGALLGPGAERARMGSRPRIHPLVPQVPGPVTAAMAT 91
E++ P + TVA E AE GALL G E + R P + P T A+ +
Sbjct: 33 EEILPEPGSETPTVASEALAELLHGALLRRGPEMGYLPGSDR-DPTLATPPAGQTLAVPS 91
Query: 92 GLAVNGKGTSPFMDALTANG 111
GT P A+T NG
Sbjct: 92 LPRATEPGTGPLTTAVTPNG 111
>gi|166235136 seizure related 6 homolog (mouse)-like 2 isoform 2
[Homo sapiens]
Length = 910
Score = 33.5 bits (75), Expect = 0.36
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 32 EKLDPVEQGQEDTVAPEVAAEKPVGALLGPGAERARMGSRPRIHPLVPQVPGPVTAAMAT 91
E++ P + TVA E AE GALL G E + R P + P T A+ +
Sbjct: 33 EEILPEPGSETPTVASEALAELLHGALLRRGPEMGYLPGSDR-DPTLATPPAGQTLAVPS 91
Query: 92 GLAVNGKGTSPFMDALTANG 111
GT P A+T NG
Sbjct: 92 LPRATEPGTGPLTTAVTPNG 111
>gi|241982802 HMG box domain containing 3 [Homo sapiens]
Length = 1292
Score = 32.0 bits (71), Expect = 1.1
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 9 KILVPKSPVKSRTAVDGFQSESPEKLDPVEQGQEDTVAPEVAAEKPVGA-LLGPGAERAR 67
K V KS V+ + ++SP P T +P A +KP G LL PG+
Sbjct: 440 KTPVVKSGVQPEVTLGTTDNDSPGADVPTPSEGTSTSSPLPAPKKPTGVDLLTPGSRAPE 499
Query: 68 MGSRPRIHPLVPQVPGPVTAAMATGLAVNGKGTS 101
+ R R P + P+ A + + V G+G+S
Sbjct: 500 LKGRARGKPSLLAAARPMRAILPAPVNV-GRGSS 532
>gi|61743954 AHNAK nucleoprotein isoform 1 [Homo sapiens]
Length = 5890
Score = 32.0 bits (71), Expect = 1.1
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 13/84 (15%)
Query: 22 AVDGFQSESPE------KLDPVEQGQE-DTVAPEVAAEKPVGALLGPGAERARMGSRPRI 74
+V GF++E PE K D G + D AP+V+ E+P G L GP + P +
Sbjct: 758 SVPGFKAEGPEVDVNLPKADVDISGPKIDVTAPDVSIEEPEGKLKGPKFK------MPEM 811
Query: 75 HPLVPQVPGPVTAAMATGLAVNGK 98
+ VP++ P G V G+
Sbjct: 812 NIKVPKISMPDVDLHLKGPNVKGE 835
Score = 32.0 bits (71), Expect = 1.1
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 18/99 (18%)
Query: 22 AVDGFQSESPE------KLDPVEQGQE-DTVAPEVAAEKPVGALLGPGAERARMGSR-PR 73
++ GF++E PE K D V G + D P+V+ E P G L GP + M + P+
Sbjct: 2057 SMPGFKAEGPEVDVNLPKADVVVSGPKVDVEVPDVSLEGPEGKLKGPKLKMPEMHFKAPK 2116
Query: 74 I-------HPLVPQVPGPVTAAMATGLAVNGKGTSPFMD 105
I H P+V G V ++ + G T P +D
Sbjct: 2117 ISMPDVDLHLKGPKVKGDVDVSLP---KLEGDLTGPSVD 2152
>gi|55749678 ninein-like [Homo sapiens]
Length = 1382
Score = 31.6 bits (70), Expect = 1.4
Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 24 DGFQSESPEKLDPVEQGQEDTVAPEVAAEKPVGALLGPGAERARMGSRPRIHPLVPQVPG 83
DG +SE P + +DT A + A P A GP +RM +VP+ P
Sbjct: 865 DGRESEEAAGAGPRRRQAQDTEATQSPAPAPAPASHGPSERWSRMQPCGVDGDIVPKEPE 924
Query: 84 PVTAAMATGLAVNGKGTSPFM 104
P A A GL G P +
Sbjct: 925 PF-GASAAGLEQPGARELPLL 944
>gi|20162554 Kruppel-like factor 14 [Homo sapiens]
Length = 323
Score = 30.8 bits (68), Expect = 2.3
Identities = 20/53 (37%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
Query: 36 PVEQGQEDTVAPEVAAEKPVGALLGPGAERARMGSRPRIHPLVPQVPGPVTAA 88
P +G EV A P AL GPG S P P +PQVP P A
Sbjct: 30 PDPEGAGGAAGSEVGAAHPESALPGPGP------SGPASVPQLPQVPAPSPGA 76
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.132 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,712,992
Number of Sequences: 37866
Number of extensions: 654570
Number of successful extensions: 2444
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 2360
Number of HSP's gapped (non-prelim): 99
length of query: 412
length of database: 18,247,518
effective HSP length: 105
effective length of query: 307
effective length of database: 14,271,588
effective search space: 4381377516
effective search space used: 4381377516
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.