Guide to the Human Genome
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Name: AMOTL1 Sequence: fasta or formatted (956aa) NCBI GI: 22027646
Description:

angiomotin like 1

Referenced in:

Cardiovascular System

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0         86           3
 C cysteine            0.6          6           1
 D aspartate           3.2         31           1
 E glutamate           9.8         94           4
 F phenylalanine       1.9         18           2
 G glycine             5.8         55           3
 H histidine           3.8         36           2
 I isoleucine          2.6         25           2
 K lysine              6.0         57           2
 L leucine             8.6         82           3
 M methionine          2.7         26           2
 N asparagine          3.1         30           2
 P proline             6.9         66           4
 Q glutamine           7.6         73           8
 R arginine            6.4         61           2
 S serine              9.2         88           3
 T threonine           5.5         53           2
 V valine              4.2         40           2
 W tryptophan          0.6          6           1
 Y tyrosine            2.4         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   angiomotin like 1 
AMOT                  0.388   angiomotin isoform 1 
AMOT                  0.283   angiomotin isoform 2 
AMOTL2                0.270   angiomotin like 2 
ERC1                  0.022   RAB6-interacting protein 2 isoform epsilon 
MYH3                  0.021   myosin, heavy chain 3, skeletal muscle, embryonic [H...
LOC727832             0.020   golgi autoantigen, golgin subfamily a-like 
LOC645202             0.020   PREDICTED: hypothetical protein LOC645202 
MYH10                 0.020   myosin, heavy polypeptide 10, non-muscle 
LOC283767             0.020   golgi autoantigen, golgin subfamily a-like 
LOC283685             0.020   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC440243             0.019   PREDICTED: Putative golgin subfamily A member 6-lik...
CCDC88C               0.019   DVL-binding protein DAPLE 
ERC1                  0.019   RAB6-interacting protein 2 isoform delta 
CCDC88A               0.019   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.019   coiled-coil domain containing 88A isoform 1 
MYH4                  0.019   myosin, heavy polypeptide 4, skeletal muscle 
ERC2                  0.018   cytomatrix protein p110 
ROCK2                 0.018   Rho-associated, coiled-coil containing protein kinas...
SMC3                  0.018   structural maintenance of chromosomes 3 
MYH2                  0.018   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.018   myosin, heavy chain 2, skeletal muscle, adult [Homo...
GOLGA4                0.018   golgi autoantigen, golgin subfamily a, 4 
CENPE                 0.017   centromere protein E 
CEP110                0.017   centrosomal protein 110kDa 
MYH7                  0.017   myosin, heavy chain 7, cardiac muscle, beta 
PLEC1                 0.017   plectin 1 isoform 11 
PLEC1                 0.017   plectin 1 isoform 10 
PLEC1                 0.017   plectin 1 isoform 8 
PLEC1                 0.017   plectin 1 isoform 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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