Guide to the Human Genome
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Name: ABTB2 Sequence: fasta or formatted (839aa) NCBI GI: 21956639
Description:

ankyrin repeat and BTB (POZ) domain containing 2

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         71           2
 C cysteine            1.8         15           1
 D aspartate           5.0         42           2
 E glutamate           7.0         59           3
 F phenylalanine       3.1         26           2
 G glycine             6.4         54           3
 H histidine           3.7         31           2
 I isoleucine          4.3         36           1
 K lysine              2.7         23           1
 L leucine            12.2        102           3
 M methionine          4.1         34           3
 N asparagine          3.5         29           2
 P proline             4.8         40           2
 Q glutamine           4.5         38           2
 R arginine            6.0         50           2
 S serine              9.1         76           2
 T threonine           4.6         39           2
 V valine              4.9         41           2
 W tryptophan          0.8          7           1
 Y tyrosine            3.1         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat and BTB (POZ) domain containing 2 [Ho... 
BTBD11                0.574   BTB (POZ) domain containing 11 isoform a 
BTBD11                0.450   BTB (POZ) domain containing 11 isoform b 
RCBTB1                0.031   regulator of chromosome condensation (RCC1) and BTB ...
RCBTB2                0.031   regulator of chromosome condensation and BTB domain c...
ANKRD17               0.028   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.028   ankyrin repeat domain protein 17 isoform b 
KLHL12                0.027   kelch-like 12 
ANKS6                 0.027   ankyrin repeat and sterile alpha motif domain contai...
SPOP                  0.025   speckle-type POZ protein 
SPOP                  0.025   speckle-type POZ protein 
SPOP                  0.025   speckle-type POZ protein 
SPOP                  0.025   speckle-type POZ protein 
SPOP                  0.025   speckle-type POZ protein 
SPOP                  0.025   speckle-type POZ protein 
ANKHD1                0.025   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.025   ANKHD1-EIF4EBP3 protein 
SPOPL                 0.024   speckle-type POZ protein-like 
ANKHD1                0.024   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.024   ankyrin repeat and KH domain containing 1 isoform 2 ...
ANKRD50               0.023   ankyrin repeat domain 50 
TANC2                 0.023   tetratricopeptide repeat, ankyrin repeat and coiled...
KBTBD4                0.022   kelch repeat and BTB (POZ) domain containing 4 isof...
KBTBD4                0.022   kelch repeat and BTB (POZ) domain containing 4 isof...
BTBD9                 0.022   BTB (POZ) domain containing 9 isoform a 
BTBD9                 0.022   BTB (POZ) domain containing 9 isoform a 
KLHL24                0.022   DRE1 protein 
KLHL7                 0.022   kelch-like 7 isoform 2 
KLHL23                0.022   kelch-like 23 
KLHL7                 0.021   kelch-like 7 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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