RCBTB1 33305

Name: RCBTB1	Sequence: fasta or formatted (531aa)		NCBI GI: 57242759
Description: regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1		Referenced in: Additional Interaction Domain Families Ran and Rag
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.3 44 2 C cysteine 3.8 20 1 D aspartate 4.3 23 2 E glutamate 5.5 29 2 F phenylalanine 4.3 23 1 G glycine 8.7 46 2 H histidine 3.6 19 2 I isoleucine 4.3 23 2 K lysine 5.3 28 2 L leucine 9.2 49 2 M methionine 1.5 8 1 N asparagine 5.3 28 2 P proline 3.0 16 2 Q glutamine 4.1 22 1 R arginine 2.6 14 1 S serine 6.4 34 2 T threonine 6.0 32 2 V valine 8.3 44 2 W tryptophan 1.7 9 1 Y tyrosine 3.8 20 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 regulator of chromosome condensation (RCC1) and BTB ... RCBTB2 0.713 regulator of chromosome condensation and BTB domain c... HERC4 0.118 hect domain and RLD 4 isoform b HERC4 0.118 hect domain and RLD 4 isoform a HERC3 0.113 hect domain and RLD 3 HERC2 0.112 hect domain and RLD 2 HERC1 0.107 guanine nucleotide exchange factor p532 RPGR 0.099 retinitis pigmentosa GTPase regulator isoform A [Homo... RPGR 0.099 retinitis pigmentosa GTPase regulator isoform C [Hom... HERC5 0.095 hect domain and RLD 5 HERC6 0.093 hect domain and RLD 6 RCC2 0.082 regulator of chromosome condensation 2 RCC2 0.082 regulator of chromosome condensation 2 SERGEF 0.073 deafness locus associated putative guanine nucleotide... NEK8 0.072 NIMA-related kinase 8 NEK9 0.069 NIMA-related kinase 9 WBSCR16 0.063 Williams-Beuren syndrome chromosome region 16 RCC1 0.060 regulator of chromosome condensation 1 isoform b [H... RCC1 0.060 regulator of chromosome condensation 1 isoform a [H... RCC1 0.060 regulator of chromosome condensation 1 isoform c [Hom... SNHG3-RCC1 0.060 regulator of chromosome condensation 1 SNHG3-RCC1 0.060 regulator of chromosome condensation 1 SNHG3-RCC1 0.060 regulator of chromosome condensation 1 LOC390561 0.057 PREDICTED: similar to hect domain and RLD 2 LOC653375 0.057 PREDICTED: RCC1-like G exchanging factor-like [Homo... LOC653375 0.057 PREDICTED: RCC1-like G exchanging factor-like [Homo... LOC100290629 0.057 PREDICTED: hypothetical protein XP_002347563 LOC390561 0.055 PREDICTED: similar to hect domain and RLD 2 ALS2 0.053 alsin isoform 2 ALS2 0.053 alsin isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.