Guide to the Human Genome
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Name: KIAA1772 Sequence: fasta or formatted (1923aa) NCBI GI: 219282747
Description:

KIAA1772

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         96           3
 C cysteine            2.1         40           2
 D aspartate           4.6         89           2
 E glutamate           6.4        123           3
 F phenylalanine       3.8         73           2
 G glycine             5.8        112           2
 H histidine           2.9         55           2
 I isoleucine          4.7         90           3
 K lysine              4.8         93           2
 L leucine            11.7        225           3
 M methionine          2.1         40           2
 N asparagine          3.7         71           2
 P proline             5.9        114           2
 Q glutamine           5.1         98           2
 R arginine            4.9         95           2
 S serine             11.0        211           5
 T threonine           4.8         93           2
 V valine              6.8        131           3
 W tryptophan          0.8         16           1
 Y tyrosine            3.0         58           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   KIAA1772 
GREB1                 0.480   GREB1 protein isoform a 
GREB1                 0.100   GREB1 protein isoform b 
GREB1                 0.086   GREB1 protein isoform c 
HRNR                  0.005   hornerin 
ZCCHC10               0.004   zinc finger, CCHC domain containing 10 
WNK1                  0.004   WNK lysine deficient protein kinase 1 
TNRC18                0.004   trinucleotide repeat containing 18 
SRRM2                 0.004   splicing coactivator subunit SRm300 
GAS2L3                0.004   growth arrest-specific 2 like 3 
LGALS3                0.004   galectin 3 
MYLK2                 0.004   skeletal myosin light chain kinase 
MUC21                 0.004   mucin 21 
LOC643446             0.004   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.004   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.004   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.004   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.004   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.004   PREDICTED: similar to ribonucleic acid binding prote...
RNPS1                 0.004   RNA-binding protein S1, serine-rich domain 
RNPS1                 0.004   RNA-binding protein S1, serine-rich domain 
PTPRA                 0.003   protein tyrosine phosphatase, receptor type, A isofo...
PTPRA                 0.003   protein tyrosine phosphatase, receptor type, A isofo...
AIM1                  0.003   absent in melanoma 1 
RFC4                  0.003   replication factor C 4 
RFC4                  0.003   replication factor C 4 
DCC                   0.003   deleted in colorectal carcinoma 
AKAP5                 0.003   A-kinase anchor protein 5 
SNAPC4                0.003   small nuclear RNA activating complex, polypeptide 4,...
RERE                  0.003   atrophin-1 like protein isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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