Guide to the Human Genome
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Name: KLF8 Sequence: fasta or formatted (257aa) NCBI GI: 226530795
Description:

Kruppel-like factor 8 isoform 2

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [359aa] Kruppel-like factor 8 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         14           2
 C cysteine            0.0          0           0
 D aspartate           4.7         12           1
 E glutamate           5.8         15           2
 F phenylalanine       1.6          4           1
 G glycine             5.4         14           2
 H histidine           1.2          3           1
 I isoleucine          5.4         14           1
 K lysine              3.9         10           1
 L leucine            10.1         26           2
 M methionine          3.9         10           1
 N asparagine          4.3         11           2
 P proline            11.3         29           2
 Q glutamine           6.2         16           2
 R arginine            1.9          5           1
 S serine             13.2         34           2
 T threonine           7.0         18           2
 V valine              7.8         20           3
 W tryptophan          0.0          0           0
 Y tyrosine            0.8          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Kruppel-like factor 8 isoform 2 
KLF8                  0.987   Kruppel-like factor 8 isoform 1 
KLF12                 0.206   Kruppel-like factor 12 
ZNF592                0.032   zinc finger protein 592 
LOC100294236          0.032   PREDICTED: similar to diffuse panbronchiolitis crit...
CRKRS                 0.027   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.027   Cdc2-related kinase, arginine/serine-rich isoform 1...
PLXNB1                0.027   plexin B1 
PLXNB1                0.027   plexin B1 
MUC17                 0.025   mucin 17 
MUC5AC                0.025   mucin 5AC 
LOC647546             0.023   PREDICTED: hypothetical protein 
FOXK2                 0.021   forkhead box K2 
MNT                   0.021   MAX binding protein 
NFRKB                 0.021   nuclear factor related to kappaB binding protein is...
NFRKB                 0.021   nuclear factor related to kappaB binding protein iso...
KIAA0754              0.019   hypothetical protein LOC643314 
NUP214                0.019   nucleoporin 214kDa 
TAF6                  0.019   TBP-associated factor 6 isoform delta 
TAF6                  0.019   TBP-associated factor 6 isoform gamma 
TAF6                  0.019   TBP-associated factor 6 isoform alpha 
TAF6                  0.019   TBP-associated factor 6 isoform alpha 
MUC5B                 0.019   mucin 5, subtype B, tracheobronchial 
FSCB                  0.019   fibrous sheath CABYR binding protein 
MYPN                  0.019   myopalladin 
NACA                  0.019   nascent polypeptide-associated complex alpha subuni...
MUC16                 0.019   mucin 16 
LOC100132635          0.019   PREDICTED: similar to mucin 5, partial 
SP4                   0.019   Sp4 transcription factor 
LOC100131251          0.017   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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