BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|214010236 mahogunin, ring finger 1 isoform 3 [Homo sapiens] (552 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|214010236 mahogunin, ring finger 1 isoform 3 [Homo sapiens] 1116 0.0 gi|44917608 mahogunin, ring finger 1 isoform 1 [Homo sapiens] 1090 0.0 gi|214010238 mahogunin, ring finger 1 isoform 4 [Homo sapiens] 1053 0.0 gi|214010234 mahogunin, ring finger 1 isoform 2 [Homo sapiens] 1026 0.0 gi|58743365 ring finger protein 157 [Homo sapiens] 559 e-159 gi|14042925 ring finger protein 26 [Homo sapiens] 55 1e-07 gi|217416388 neuralized homolog 1B [Homo sapiens] 53 6e-07 gi|171542821 mitochondrial ubiquitin ligase activator of NFKB 1 ... 51 2e-06 gi|5729765 cell growth regulator with ring finger domain 1 [Homo... 50 7e-06 gi|223278368 neuralized-like [Homo sapiens] 49 2e-05 gi|53729363 leucine rich repeat and sterile alpha motif containi... 44 4e-04 gi|53729361 leucine rich repeat and sterile alpha motif containi... 44 4e-04 gi|53729359 leucine rich repeat and sterile alpha motif containi... 44 4e-04 gi|66529407 tensin [Homo sapiens] 44 5e-04 gi|21361493 ring finger protein 141 [Homo sapiens] 43 7e-04 gi|62865649 rififylin [Homo sapiens] 43 9e-04 gi|17432433 rififylin [Homo sapiens] 43 9e-04 gi|89993691 mouse double minute 2 homolog isoform MDM2e [Homo sa... 42 0.001 gi|37595539 ring finger protein 34 isoform 1 [Homo sapiens] 42 0.001 gi|37595537 ring finger protein 34 isoform 2 [Homo sapiens] 42 0.001 gi|58530863 melanoma antigen family A, 10 [Homo sapiens] 42 0.001 gi|10567820 melanoma antigen family A, 10 [Homo sapiens] 42 0.001 gi|57165361 ring finger protein 165 [Homo sapiens] 42 0.001 gi|21040269 ring finger protein 133 [Homo sapiens] 41 0.002 gi|54792146 tripartite motif-containing 47 [Homo sapiens] 41 0.002 gi|4502141 baculoviral IAP repeat-containing protein 2 [Homo sap... 40 0.004 gi|33946285 baculoviral IAP repeat-containing protein 3 [Homo sa... 40 0.006 gi|4502139 baculoviral IAP repeat-containing protein 3 [Homo sap... 40 0.006 gi|45387949 ring finger and SPRY domain containing 1 [Homo sapiens] 40 0.006 gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 40 0.007 >gi|214010236 mahogunin, ring finger 1 isoform 3 [Homo sapiens] Length = 552 Score = 1116 bits (2887), Expect = 0.0 Identities = 552/552 (100%), Positives = 552/552 (100%) Query: 1 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL 60 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL Sbjct: 1 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL 60 Query: 61 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL 120 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL Sbjct: 61 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL 120 Query: 121 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF 180 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF Sbjct: 121 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF 180 Query: 181 SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQK 240 SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQK Sbjct: 181 SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQK 240 Query: 241 QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCT 300 QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCT Sbjct: 241 QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCT 300 Query: 301 SCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFKK 360 SCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFKK Sbjct: 301 SCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFKK 360 Query: 361 SKPHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGIS 420 SKPHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGIS Sbjct: 361 SKPHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGIS 420 Query: 421 DGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPL 480 DGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPL Sbjct: 421 DGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPL 480 Query: 481 GGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLPA 540 GGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLPA Sbjct: 481 GGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLPA 540 Query: 541 LGPDSCSVGIDE 552 LGPDSCSVGIDE Sbjct: 541 LGPDSCSVGIDE 552 >gi|44917608 mahogunin, ring finger 1 isoform 1 [Homo sapiens] Length = 576 Score = 1090 bits (2818), Expect = 0.0 Identities = 539/539 (100%), Positives = 539/539 (100%) Query: 1 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL 60 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL Sbjct: 1 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL 60 Query: 61 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL 120 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL Sbjct: 61 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL 120 Query: 121 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF 180 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF Sbjct: 121 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF 180 Query: 181 SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQK 240 SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQK Sbjct: 181 SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQK 240 Query: 241 QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCT 300 QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCT Sbjct: 241 QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCT 300 Query: 301 SCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFKK 360 SCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFKK Sbjct: 301 SCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFKK 360 Query: 361 SKPHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGIS 420 SKPHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGIS Sbjct: 361 SKPHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGIS 420 Query: 421 DGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPL 480 DGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPL Sbjct: 421 DGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPL 480 Query: 481 GGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLP 539 GGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLP Sbjct: 481 GGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLP 539 >gi|214010238 mahogunin, ring finger 1 isoform 4 [Homo sapiens] Length = 531 Score = 1053 bits (2722), Expect = 0.0 Identities = 530/553 (95%), Positives = 530/553 (95%), Gaps = 23/553 (4%) Query: 1 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL 60 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL Sbjct: 1 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL 60 Query: 61 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL 120 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL Sbjct: 61 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL 120 Query: 121 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF 180 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF Sbjct: 121 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF 180 Query: 181 SEWKDDELNFDLDRGVFPVVIQAVVDEGD-VVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ 239 SEWKDDELNFDLDRGVFPVVIQAVVDEGD VVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ Sbjct: 181 SEWKDDELNFDLDRGVFPVVIQAVVDEGDAVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ 240 Query: 240 KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC 299 KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC Sbjct: 241 KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC 300 Query: 300 TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFK 359 TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHS Sbjct: 301 TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHS---- 356 Query: 360 KSKPHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGI 419 NSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGI Sbjct: 357 ------------------NSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGI 398 Query: 420 SDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPP 479 SDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPP Sbjct: 399 SDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPP 458 Query: 480 LGGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLP 539 LGGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLP Sbjct: 459 LGGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLP 518 Query: 540 ALGPDSCSVGIDE 552 ALGPDSCSVGIDE Sbjct: 519 ALGPDSCSVGIDE 531 >gi|214010234 mahogunin, ring finger 1 isoform 2 [Homo sapiens] Length = 555 Score = 1026 bits (2653), Expect = 0.0 Identities = 517/540 (95%), Positives = 517/540 (95%), Gaps = 23/540 (4%) Query: 1 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL 60 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL Sbjct: 1 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL 60 Query: 61 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL 120 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL Sbjct: 61 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL 120 Query: 121 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF 180 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF Sbjct: 121 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF 180 Query: 181 SEWKDDELNFDLDRGVFPVVIQAVVDEGD-VVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ 239 SEWKDDELNFDLDRGVFPVVIQAVVDEGD VVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ Sbjct: 181 SEWKDDELNFDLDRGVFPVVIQAVVDEGDAVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ 240 Query: 240 KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC 299 KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC Sbjct: 241 KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC 300 Query: 300 TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFK 359 TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHS Sbjct: 301 TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHS---- 356 Query: 360 KSKPHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGI 419 NSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGI Sbjct: 357 ------------------NSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGI 398 Query: 420 SDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPP 479 SDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPP Sbjct: 399 SDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPP 458 Query: 480 LGGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLP 539 LGGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLP Sbjct: 459 LGGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLP 518 >gi|58743365 ring finger protein 157 [Homo sapiens] Length = 679 Score = 559 bits (1440), Expect = e-159 Identities = 291/474 (61%), Positives = 346/474 (72%), Gaps = 30/474 (6%) Query: 1 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL 60 MG++ SR+ AGVE++DI +NS YRYPPKSG+YFASHF MGGEKFD+ HPEGYLFGEN DL Sbjct: 1 MGALTSRQHAGVEEVDIPSNSVYRYPPKSGSYFASHFIMGGEKFDSTHPEGYLFGENSDL 60 Query: 61 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL 120 NFLG+RPV FPY P P EPVKTLRSLVNIRKD+LRLV+ ++ SP E+ K +V Y++ Sbjct: 61 NFLGNRPVVFPYAAPPPQEPVKTLRSLVNIRKDTLRLVKCAEEVKSPGEEASKAKVHYNV 120 Query: 121 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF 180 EFTFD DARVAITIY QA+EEF NG A Y PK SLQSETV YKRGV QQF LPS +D Sbjct: 121 EFTFDTDARVAITIYYQATEEFQNGIASYIPKDNSLQSETVQYKRGVCQQFCLPSHTVDP 180 Query: 181 SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQK 240 SEW ++EL FDLDR V+P+V+ AVVDEGD E GH HVLL FEKH DG+F VKPLKQK Sbjct: 181 SEWAEEELGFDLDREVYPLVVHAVVDEGD--EYFGHCHVLLGTFEKHTDGTFCVKPLKQK 238 Query: 241 QIVDRVSYLLQEIYGIENK-NNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC 299 Q+VD VSYLLQEIYGIENK N Q++K ++DE SDNS ECVVCLSD+RDTLILPCRHLCLC Sbjct: 239 QVVDGVSYLLQEIYGIENKYNTQDSKVAEDEVSDNSAECVVCLSDVRDTLILPCRHLCLC 298 Query: 300 TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFK 359 +CADTLRYQANNCPICRLPFRALLQIRA+RKK G LSP SF+P+++ E Sbjct: 299 NTCADTLRYQANNCPICRLPFRALLQIRAMRKKLGPLSPTSFNPIISSQTSDSEE----- 353 Query: 360 KSKPHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGI 419 HP +S+++PPGYE +SLLEALNG SPA+P + + SG+ Sbjct: 354 ----HP------------SSENIPPGYEVVSLLEALNGPLTPSPAVPPLHVLGDGHLSGM 397 Query: 420 -----SDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEE 468 SDG ++ +D + DSS Q G K+ + SS +HEE++E Sbjct: 398 LPSYGSDGHLPPVRTISPLDRLSDSSSQ-GLKLKKSLSKSTSQNSSVLHEEEDE 450 >gi|14042925 ring finger protein 26 [Homo sapiens] Length = 433 Score = 55.5 bits (132), Expect = 1e-07 Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 11/81 (13%) Query: 253 IYGIENKNNQETKPSDD-----ENSDNSNECVVCLSDLRDTLILPCRHLCLCTSCADTLR 307 + G E N +E D + + +CV+C + L+LPCRHLCLC +C + L Sbjct: 350 VRGRERLNEEEPPGGQDPWKLLKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILM 409 Query: 308 YQA---NNCPICRLPFRALLQ 325 NCP+CR R +LQ Sbjct: 410 RHPVYHRNCPLCR---RGILQ 427 >gi|217416388 neuralized homolog 1B [Homo sapiens] Length = 555 Score = 53.1 bits (126), Expect = 6e-07 Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Query: 275 SNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANN-CPICRLPFRALLQI 326 + EC VC DT+I C H+CLC SC L+ QA CPICR P + +++I Sbjct: 500 NGECTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKI 552 >gi|171542821 mitochondrial ubiquitin ligase activator of NFKB 1 [Homo sapiens] Length = 352 Score = 51.2 bits (121), Expect = 2e-06 Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 3/83 (3%) Query: 235 KPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCR 294 K Q+Q R+ + +E E + KP D E+ ++ CVVCLS + + L C Sbjct: 261 KQYLQRQERLRLKQMQEEFQEHEAQLLSRAKPEDRESLKSA--CVVCLSSFKSCVFLECG 318 Query: 295 HLCLCTSCADTLRYQANNCPICR 317 H+C CT C L + CPICR Sbjct: 319 HVCSCTECYRALP-EPKKCPICR 340 >gi|5729765 cell growth regulator with ring finger domain 1 [Homo sapiens] Length = 332 Score = 49.7 bits (117), Expect = 7e-06 Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 8/58 (13%) Query: 260 NNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICR 317 + E +PS++ NS +CVVC + + ++LPCRH CLC C + CP+CR Sbjct: 260 SESEVEPSEE----NSKDCVVCQNGTVNWVLLPCRHTCLCDGCVKYFQ----QCPMCR 309 >gi|223278368 neuralized-like [Homo sapiens] Length = 574 Score = 48.5 bits (114), Expect = 2e-05 Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%) Query: 275 SNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANN-CPICRLPFRALLQ 325 S+EC +C DT+I C H+CLC +C L+ + CPICR P + +++ Sbjct: 518 SDECTICYEHAVDTVIYTCGHMCLCYACGLRLKKALHACCPICRRPIKDIIK 569 >gi|53729363 leucine rich repeat and sterile alpha motif containing 1 [Homo sapiens] Length = 723 Score = 43.9 bits (102), Expect = 4e-04 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Query: 275 SNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQI 326 ++ECVVCL + L C H+C C C LR CP+CR L+I Sbjct: 672 ASECVVCLEREAQMIFLNCGHVCCCQQCCQPLR----TCPLCRQDIAQRLRI 719 >gi|53729361 leucine rich repeat and sterile alpha motif containing 1 [Homo sapiens] Length = 723 Score = 43.9 bits (102), Expect = 4e-04 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Query: 275 SNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQI 326 ++ECVVCL + L C H+C C C LR CP+CR L+I Sbjct: 672 ASECVVCLEREAQMIFLNCGHVCCCQQCCQPLR----TCPLCRQDIAQRLRI 719 >gi|53729359 leucine rich repeat and sterile alpha motif containing 1 [Homo sapiens] Length = 723 Score = 43.9 bits (102), Expect = 4e-04 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Query: 275 SNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQI 326 ++ECVVCL + L C H+C C C LR CP+CR L+I Sbjct: 672 ASECVVCLEREAQMIFLNCGHVCCCQQCCQPLR----TCPLCRQDIAQRLRI 719 >gi|66529407 tensin [Homo sapiens] Length = 1735 Score = 43.5 bits (101), Expect = 5e-04 Identities = 52/204 (25%), Positives = 77/204 (37%), Gaps = 24/204 (11%) Query: 333 PGALSPVSFSPVLAQSLEHDEHSCPFKKSK----PHPASLASKKPKRETNSDSVPPG--Y 386 PGA SP+S P+ S + S P +S+ P SL + +P + +SVPPG Y Sbjct: 739 PGA-SPLSSQPLSGSSRQ----SHPLTQSRSGYIPSGHSLGTPEPAPRASLESVPPGRSY 793 Query: 387 EPISLLEALNG----LRAVSPAIPSAPLYEEITYSGISDGLSQASCPLAAIDHILDSSRQ 442 P L G + SPA S P + T+S AS P +L Sbjct: 794 SPYDYQPCLAGPNQDFHSKSPASSSLPAFLPTTHSPPGPQQPPASLPGLTAQPLLSPKEA 853 Query: 443 KGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPLGGAELALRESSSPESFITEEVD 502 P + L H + E A PP LR ++ + + Sbjct: 854 TSDPSRTPEEEPLNLEGLVAHRVAGVQAREKQPAEPP-----APLRRRAASDGQYENQSP 908 Query: 503 ESSSPQQGTRAASIENVLQDSSPE 526 E++SP R+ + + +Q SPE Sbjct: 909 EATSP----RSPGVRSPVQCVSPE 928 >gi|21361493 ring finger protein 141 [Homo sapiens] Length = 230 Score = 43.1 bits (100), Expect = 7e-04 Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 2/45 (4%) Query: 274 NSNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRL 318 + EC +C+ D R LILPC H C C D + NCPICRL Sbjct: 151 DEEECCICM-DGRADLILPCAH-SFCQKCIDKWSDRHRNCPICRL 193 >gi|62865649 rififylin [Homo sapiens] Length = 363 Score = 42.7 bits (99), Expect = 9e-04 Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 14/83 (16%) Query: 241 QIVDRVSYLLQEIYGIENKNNQETKPSDDENSD------NSNECVVCLSDLRDTLILPCR 294 ++++RV+ L ++ G+++ ++D+N N C +C+ D ++L C Sbjct: 277 ELMERVTRLYKDQKGLQHL----VSGAEDQNGGAVPSGLEENLCKICMDSPIDCVLLECG 332 Query: 295 HLCLCTSCADTLRYQANNCPICR 317 H+ CT C + N CPICR Sbjct: 333 HMVTCTKCGKRM----NECPICR 351 >gi|17432433 rififylin [Homo sapiens] Length = 363 Score = 42.7 bits (99), Expect = 9e-04 Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 14/83 (16%) Query: 241 QIVDRVSYLLQEIYGIENKNNQETKPSDDENSD------NSNECVVCLSDLRDTLILPCR 294 ++++RV+ L ++ G+++ ++D+N N C +C+ D ++L C Sbjct: 277 ELMERVTRLYKDQKGLQHL----VSGAEDQNGGAVPSGLEENLCKICMDSPIDCVLLECG 332 Query: 295 HLCLCTSCADTLRYQANNCPICR 317 H+ CT C + N CPICR Sbjct: 333 HMVTCTKCGKRM----NECPICR 351 >gi|89993691 mouse double minute 2 homolog isoform MDM2e [Homo sapiens] Length = 179 Score = 42.4 bits (98), Expect = 0.001 Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 12/99 (12%) Query: 238 KQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNE----------CVVCLSDLRD 287 KQ+ IV + LL +++G+ + + +E + + ++ + S E CV+C ++ Sbjct: 76 KQQHIVYCSNDLLGDLFGVPSFSVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKN 135 Query: 288 TLILPCR--HLCLCTSCADTLRYQANNCPICRLPFRALL 324 I+ + HL C +CA L+ + CP+CR P + ++ Sbjct: 136 GCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIV 174 >gi|37595539 ring finger protein 34 isoform 1 [Homo sapiens] Length = 373 Score = 42.4 bits (98), Expect = 0.001 Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 11/79 (13%) Query: 241 QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNE--CVVCLSDLRDTLILPCRHLCL 298 ++V++V+ L +E N+ NQ++ + D ++ C +C+ + D ++L C H+ Sbjct: 292 ELVEKVNRLYKE-----NEENQKSYGERLQLQDEEDDSLCRICMDAVIDCVLLECGHMVT 346 Query: 299 CTSCADTLRYQANNCPICR 317 CT C + + CPICR Sbjct: 347 CTKCGKRM----SECPICR 361 >gi|37595537 ring finger protein 34 isoform 2 [Homo sapiens] Length = 372 Score = 42.4 bits (98), Expect = 0.001 Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 11/79 (13%) Query: 241 QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNE--CVVCLSDLRDTLILPCRHLCL 298 ++V++V+ L +E N+ NQ++ + D ++ C +C+ + D ++L C H+ Sbjct: 291 ELVEKVNRLYKE-----NEENQKSYGERLQLQDEEDDSLCRICMDAVIDCVLLECGHMVT 345 Query: 299 CTSCADTLRYQANNCPICR 317 CT C + + CPICR Sbjct: 346 CTKCGKRM----SECPICR 360 >gi|58530863 melanoma antigen family A, 10 [Homo sapiens] Length = 369 Score = 42.0 bits (97), Expect = 0.001 Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 3/114 (2%) Query: 412 EEITYSGISDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSS--PIHEEDEEK 469 E++ + GL A PLA + S+ S P S+ S SS P+ E+ Sbjct: 14 EDLQSQSETQGLEGAQAPLAVEEDASSSTSTSSSFPSSFPSSSSSSSSSCYPLIPSTPEE 73 Query: 470 LSEDVDAPPPLGGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDS 523 +S D + P P A++A S S ++ DE SS Q+ ++++ VL DS Sbjct: 74 VSADDETPNPPQSAQIACSSPSVVASLPLDQSDEGSSSQKEESPSTLQ-VLPDS 126 >gi|10567820 melanoma antigen family A, 10 [Homo sapiens] Length = 369 Score = 42.0 bits (97), Expect = 0.001 Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 3/114 (2%) Query: 412 EEITYSGISDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSS--PIHEEDEEK 469 E++ + GL A PLA + S+ S P S+ S SS P+ E+ Sbjct: 14 EDLQSQSETQGLEGAQAPLAVEEDASSSTSTSSSFPSSFPSSSSSSSSSCYPLIPSTPEE 73 Query: 470 LSEDVDAPPPLGGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDS 523 +S D + P P A++A S S ++ DE SS Q+ ++++ VL DS Sbjct: 74 VSADDETPNPPQSAQIACSSPSVVASLPLDQSDEGSSSQKEESPSTLQ-VLPDS 126 >gi|57165361 ring finger protein 165 [Homo sapiens] Length = 346 Score = 42.0 bits (97), Expect = 0.001 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 4/63 (6%) Query: 265 KPSDDENSDNSNECVVCLS---DLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPFR 321 K + E SD +C +CLS D D LPC HL C D + CPICR+ Sbjct: 281 KKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHL-FHQLCVDQWLAMSKKCPICRVDIE 339 Query: 322 ALL 324 L Sbjct: 340 TQL 342 >gi|21040269 ring finger protein 133 [Homo sapiens] Length = 376 Score = 41.2 bits (95), Expect = 0.002 Identities = 34/132 (25%), Positives = 53/132 (40%), Gaps = 7/132 (5%) Query: 265 KPSDDENSDNSNECVVCLSDLRD---TLILPCRHLCLCTSCADTLRYQANNCPICRLPFR 321 K D+E + N + CV+C + IL C+H +C D CPIC+ Sbjct: 243 KEGDEEINPNGDSCVICFERYKPNDIVRILTCKHF-FHKNCIDPWILPHGTCPICKCDIL 301 Query: 322 ALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFKKSKPHPASLASKKPKRETNSDS 381 +L I+ V + V S L ++L E ++ PA + K E N S Sbjct: 302 KVLGIQVVVENGTEPLQVLMSNELPETLSPSEEE---TNNEVSPAGTSDKVIHVEENPTS 358 Query: 382 VPPGYEPISLLE 393 +P S++E Sbjct: 359 QNNDIQPHSVVE 370 >gi|54792146 tripartite motif-containing 47 [Homo sapiens] Length = 638 Score = 41.2 bits (95), Expect = 0.002 Identities = 42/152 (27%), Positives = 61/152 (40%), Gaps = 31/152 (20%) Query: 278 CVVCLSDLRDTLILPCRHLCLCTSCADTLRYQ-----------ANNCPICRLPFRALLQI 326 C +CL LR+ + LPC H C +C L A CP+C+ PF LQ+ Sbjct: 9 CPICLEPLREPVTLPCGH-NFCLACLGALWPHRGASGAGGPGGAARCPLCQEPFPDGLQL 67 Query: 327 R---------AVRKKPGALSPVSFSPVLAQSLEHDEHSCPFK-KSKPHPASLASKKP--- 373 R +R+ G S +P LA E S P S P P++ + +P Sbjct: 68 RKNHTLSELLQLRQGSGPGSGPGPAPALA-----PEPSAPSALPSVPEPSAPCAPEPWPA 122 Query: 374 -KRETNSDSVPPGYEPISLLEALNGLRAVSPA 404 + D+ P G + L L+ L + PA Sbjct: 123 GEEPVRCDACPEGAALPAALSCLSCLASFCPA 154 >gi|4502141 baculoviral IAP repeat-containing protein 2 [Homo sapiens] Length = 618 Score = 40.4 bits (93), Expect = 0.004 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 4/40 (10%) Query: 278 CVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICR 317 C VC+ + +PC HL +C CA +LR CPICR Sbjct: 571 CKVCMDKEVSVVFIPCGHLVVCQECAPSLR----KCPICR 606 >gi|33946285 baculoviral IAP repeat-containing protein 3 [Homo sapiens] Length = 604 Score = 40.0 bits (92), Expect = 0.006 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 4/40 (10%) Query: 278 CVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICR 317 C VC+ + +PC HL +C CA +LR CPICR Sbjct: 557 CKVCMDKEVSIVFIPCGHLVVCKDCAPSLR----KCPICR 592 >gi|4502139 baculoviral IAP repeat-containing protein 3 [Homo sapiens] Length = 604 Score = 40.0 bits (92), Expect = 0.006 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 4/40 (10%) Query: 278 CVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICR 317 C VC+ + +PC HL +C CA +LR CPICR Sbjct: 557 CKVCMDKEVSIVFIPCGHLVVCKDCAPSLR----KCPICR 592 >gi|45387949 ring finger and SPRY domain containing 1 [Homo sapiens] Length = 576 Score = 40.0 bits (92), Expect = 0.006 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%) Query: 272 SDNSNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICR 317 S N C +C ++ DT + PC H LC CA Q CP+CR Sbjct: 521 SIRENCCSLCCDEVADTQLKPCGHSDLCMDCA----LQLETCPLCR 562 >gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo sapiens] Length = 5537 Score = 39.7 bits (91), Expect = 0.007 Identities = 38/130 (29%), Positives = 56/130 (43%), Gaps = 13/130 (10%) Query: 380 DSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGISDGLSQASCPLAAIDHILDS 439 D+V PGY S L+ L+ L+ SPA P P TY+ + + Q S P Sbjct: 4861 DAVLPGYTLKSQLDILSLLKQESPA-PEPPTQHSYTYNVSNLDVRQLSAP---------P 4910 Query: 440 SRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSE-DVDAPPPLGGAELALRESSSPESFIT 498 + P S S P+ P+ E E L+E V +P PL + + R P + Sbjct: 4911 PEEPSPPPSPLAPSPASPPTEPLVELPTEPLAEPPVPSPLPLASSPESAR--PKPRARPP 4968 Query: 499 EEVDESSSPQ 508 EE ++S P+ Sbjct: 4969 EEGEDSRPPR 4978 Score = 33.9 bits (76), Expect = 0.40 Identities = 55/217 (25%), Positives = 77/217 (35%), Gaps = 24/217 (11%) Query: 332 KPGALSPVSFSPVLAQSLEHDEHSCPFKKSKP--HPASLASKKPKRETNSDSVPPGYEPI 389 KP + V P L L + P + P P + P E + S PP P Sbjct: 417 KPLGKAGVQLEPQLEAPLNEEMPLLPPPEESPLSPPPEESPTSPPPEASRLSPPPEELPA 476 Query: 390 SLL-EALNGLRAVSPAIPSAPLYEEITYSGISDGLSQASCPLAAIDHILDSSRQKGRPQS 448 S L EAL+ R + + P +P EE S + S P + ++ S P+ Sbjct: 477 SPLPEALHLSRPLEES-PLSPPPEESPLSPPPE-----SSPFSPLEESPLSP-----PEE 525 Query: 449 KAPDSTLRSPSSPIHEE-------DEEKLS---EDVDAPPPLGGAELALRESSSPESFIT 498 P L +P SP E +E LS E++ PP + L+ SP S Sbjct: 526 SPPSPALETPLSPPPEASPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPPP 585 Query: 499 EEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPAD 535 EE S P+ E PE PP + Sbjct: 586 EESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPE 622 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.314 0.133 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,291,486 Number of Sequences: 37866 Number of extensions: 1242260 Number of successful extensions: 3800 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 50 Number of HSP's successfully gapped in prelim test: 207 Number of HSP's that attempted gapping in prelim test: 3619 Number of HSP's gapped (non-prelim): 367 length of query: 552 length of database: 18,247,518 effective HSP length: 107 effective length of query: 445 effective length of database: 14,195,856 effective search space: 6317155920 effective search space used: 6317155920 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.