Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 214010149
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|214010149 gamma-glutamyl carboxylase isoform 2 [Homo
sapiens]
(701 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|214010149 gamma-glutamyl carboxylase isoform 2 [Homo sapiens] 1441 0.0
gi|21361163 gamma-glutamyl carboxylase isoform 1 [Homo sapiens] 1416 0.0
gi|38348298 ankyrin repeat domain 45 [Homo sapiens] 36 0.11
gi|56549694 enabled homolog isoform a [Homo sapiens] 35 0.24
gi|39930375 enabled homolog isoform b [Homo sapiens] 35 0.24
gi|114155133 dynein, axonemal, heavy chain 9 isoform 2 [Homo sap... 31 3.4
gi|87298937 centrosomal protein 110kDa [Homo sapiens] 31 3.4
gi|5031579 A-kinase anchor protein 8 [Homo sapiens] 31 4.5
gi|21536320 heterogeneous nuclear ribonucleoprotein U-like 1 iso... 30 5.8
gi|21536326 heterogeneous nuclear ribonucleoprotein U-like 1 iso... 30 5.8
gi|4758532 ral guanine nucleotide dissociation stimulator-like 2... 30 5.8
gi|32307150 O-linked GlcNAc transferase isoform 2 [Homo sapiens] 30 7.6
gi|32307148 O-linked GlcNAc transferase isoform 1 [Homo sapiens] 30 7.6
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] 30 7.6
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens] 30 7.6
gi|37622341 zinc finger protein 42 isoform 2 [Homo sapiens] 30 9.9
gi|37622345 zinc finger protein 42 isoform 1 [Homo sapiens] 30 9.9
gi|221316586 BSD domain containing 1 isoform d [Homo sapiens] 30 9.9
gi|221316584 BSD domain containing 1 isoform c [Homo sapiens] 30 9.9
gi|221316581 BSD domain containing 1 isoform a [Homo sapiens] 30 9.9
gi|221316578 BSD domain containing 1 isoform b [Homo sapiens] 30 9.9
gi|21264355 SWI/SNF-related matrix-associated actin-dependent re... 30 9.9
gi|132566536 voltage-gated calcium channel alpha(2)delta-4 subun... 30 9.9
>gi|214010149 gamma-glutamyl carboxylase isoform 2 [Homo sapiens]
Length = 701
Score = 1441 bits (3730), Expect = 0.0
Identities = 701/701 (100%), Positives = 701/701 (100%)
Query: 1 MAVSAGSARTSPSSGFLMVLDIPQERGLSSLDRKYLDGLDVCRFPLLDALRPLPLDWMYL 60
MAVSAGSARTSPSSGFLMVLDIPQERGLSSLDRKYLDGLDVCRFPLLDALRPLPLDWMYL
Sbjct: 1 MAVSAGSARTSPSSGFLMVLDIPQERGLSSLDRKYLDGLDVCRFPLLDALRPLPLDWMYL 60
Query: 61 VYTIMFLGALGMMLGLCYRISCVLFLLPYWYVFLLDKTSWNNHSYLYGLLAFQLTFMDAN 120
VYTIMFLGALGMMLGLCYRISCVLFLLPYWYVFLLDKTSWNNHSYLYGLLAFQLTFMDAN
Sbjct: 61 VYTIMFLGALGMMLGLCYRISCVLFLLPYWYVFLLDKTSWNNHSYLYGLLAFQLTFMDAN 120
Query: 121 HYWSVDGLLNAHRRNAHVPLWNYAVLRGQIFIVYFIAGVKKLDADWVEGYSMEYLSRHWL 180
HYWSVDGLLNAHRRNAHVPLWNYAVLRGQIFIVYFIAGVKKLDADWVEGYSMEYLSRHWL
Sbjct: 121 HYWSVDGLLNAHRRNAHVPLWNYAVLRGQIFIVYFIAGVKKLDADWVEGYSMEYLSRHWL 180
Query: 181 FSPFKLLLSEELTSLLVVHWGGLLLDLSAGFLLFFDVSRSIGLFFVSYFHCMNSQLFSIG 240
FSPFKLLLSEELTSLLVVHWGGLLLDLSAGFLLFFDVSRSIGLFFVSYFHCMNSQLFSIG
Sbjct: 181 FSPFKLLLSEELTSLLVVHWGGLLLDLSAGFLLFFDVSRSIGLFFVSYFHCMNSQLFSIG 240
Query: 241 MFSYVMLASSPLFCSPEWPRKLVSYCPRRLQQLLPLKAAPQPSVSCVYKRSRGKSGQKPG 300
MFSYVMLASSPLFCSPEWPRKLVSYCPRRLQQLLPLKAAPQPSVSCVYKRSRGKSGQKPG
Sbjct: 241 MFSYVMLASSPLFCSPEWPRKLVSYCPRRLQQLLPLKAAPQPSVSCVYKRSRGKSGQKPG 300
Query: 301 LRHQLGAAFTLLYLLEQLFLPYSHFLTQGYNNWTNGLYGYSWDMMVHSRSHQHVKITYRD 360
LRHQLGAAFTLLYLLEQLFLPYSHFLTQGYNNWTNGLYGYSWDMMVHSRSHQHVKITYRD
Sbjct: 301 LRHQLGAAFTLLYLLEQLFLPYSHFLTQGYNNWTNGLYGYSWDMMVHSRSHQHVKITYRD 360
Query: 361 GRTGELGYLNPGVFTQSRRWKDHADMLKQYATCLSRLLPKYNVTEPQIYFDIWVSINDRF 420
GRTGELGYLNPGVFTQSRRWKDHADMLKQYATCLSRLLPKYNVTEPQIYFDIWVSINDRF
Sbjct: 361 GRTGELGYLNPGVFTQSRRWKDHADMLKQYATCLSRLLPKYNVTEPQIYFDIWVSINDRF 420
Query: 421 QQRIFDPRVDIVQAAWSPFQRTSWVQPLLMDLSPWRAKLQEIKSSLDNHTEVVFIADFPG 480
QQRIFDPRVDIVQAAWSPFQRTSWVQPLLMDLSPWRAKLQEIKSSLDNHTEVVFIADFPG
Sbjct: 421 QQRIFDPRVDIVQAAWSPFQRTSWVQPLLMDLSPWRAKLQEIKSSLDNHTEVVFIADFPG 480
Query: 481 LHLENFVSEDLGNTSIQLLQGEVTVELVAEQKNQTLREGEKMQLPAGEYHKVYTTSPSPS 540
LHLENFVSEDLGNTSIQLLQGEVTVELVAEQKNQTLREGEKMQLPAGEYHKVYTTSPSPS
Sbjct: 481 LHLENFVSEDLGNTSIQLLQGEVTVELVAEQKNQTLREGEKMQLPAGEYHKVYTTSPSPS 540
Query: 541 CYMYVYVNTTELALEQDLAYLQELKEKVENGSETGPLPPELQPLLEGEVKGGPEPTPLVQ 600
CYMYVYVNTTELALEQDLAYLQELKEKVENGSETGPLPPELQPLLEGEVKGGPEPTPLVQ
Sbjct: 541 CYMYVYVNTTELALEQDLAYLQELKEKVENGSETGPLPPELQPLLEGEVKGGPEPTPLVQ 600
Query: 601 TFLRRQQRLQEIERRRNTPFHERFFRFLLRKLYVFRRSFLMTCISLRNLILGRPSLEQLA 660
TFLRRQQRLQEIERRRNTPFHERFFRFLLRKLYVFRRSFLMTCISLRNLILGRPSLEQLA
Sbjct: 601 TFLRRQQRLQEIERRRNTPFHERFFRFLLRKLYVFRRSFLMTCISLRNLILGRPSLEQLA 660
Query: 661 QEVTYANLRPFEAVGELNPSNTDSSHSNPPESNPDPVHSEF 701
QEVTYANLRPFEAVGELNPSNTDSSHSNPPESNPDPVHSEF
Sbjct: 661 QEVTYANLRPFEAVGELNPSNTDSSHSNPPESNPDPVHSEF 701
>gi|21361163 gamma-glutamyl carboxylase isoform 1 [Homo sapiens]
Length = 758
Score = 1416 bits (3666), Expect = 0.0
Identities = 687/687 (100%), Positives = 687/687 (100%)
Query: 15 GFLMVLDIPQERGLSSLDRKYLDGLDVCRFPLLDALRPLPLDWMYLVYTIMFLGALGMML 74
GFLMVLDIPQERGLSSLDRKYLDGLDVCRFPLLDALRPLPLDWMYLVYTIMFLGALGMML
Sbjct: 72 GFLMVLDIPQERGLSSLDRKYLDGLDVCRFPLLDALRPLPLDWMYLVYTIMFLGALGMML 131
Query: 75 GLCYRISCVLFLLPYWYVFLLDKTSWNNHSYLYGLLAFQLTFMDANHYWSVDGLLNAHRR 134
GLCYRISCVLFLLPYWYVFLLDKTSWNNHSYLYGLLAFQLTFMDANHYWSVDGLLNAHRR
Sbjct: 132 GLCYRISCVLFLLPYWYVFLLDKTSWNNHSYLYGLLAFQLTFMDANHYWSVDGLLNAHRR 191
Query: 135 NAHVPLWNYAVLRGQIFIVYFIAGVKKLDADWVEGYSMEYLSRHWLFSPFKLLLSEELTS 194
NAHVPLWNYAVLRGQIFIVYFIAGVKKLDADWVEGYSMEYLSRHWLFSPFKLLLSEELTS
Sbjct: 192 NAHVPLWNYAVLRGQIFIVYFIAGVKKLDADWVEGYSMEYLSRHWLFSPFKLLLSEELTS 251
Query: 195 LLVVHWGGLLLDLSAGFLLFFDVSRSIGLFFVSYFHCMNSQLFSIGMFSYVMLASSPLFC 254
LLVVHWGGLLLDLSAGFLLFFDVSRSIGLFFVSYFHCMNSQLFSIGMFSYVMLASSPLFC
Sbjct: 252 LLVVHWGGLLLDLSAGFLLFFDVSRSIGLFFVSYFHCMNSQLFSIGMFSYVMLASSPLFC 311
Query: 255 SPEWPRKLVSYCPRRLQQLLPLKAAPQPSVSCVYKRSRGKSGQKPGLRHQLGAAFTLLYL 314
SPEWPRKLVSYCPRRLQQLLPLKAAPQPSVSCVYKRSRGKSGQKPGLRHQLGAAFTLLYL
Sbjct: 312 SPEWPRKLVSYCPRRLQQLLPLKAAPQPSVSCVYKRSRGKSGQKPGLRHQLGAAFTLLYL 371
Query: 315 LEQLFLPYSHFLTQGYNNWTNGLYGYSWDMMVHSRSHQHVKITYRDGRTGELGYLNPGVF 374
LEQLFLPYSHFLTQGYNNWTNGLYGYSWDMMVHSRSHQHVKITYRDGRTGELGYLNPGVF
Sbjct: 372 LEQLFLPYSHFLTQGYNNWTNGLYGYSWDMMVHSRSHQHVKITYRDGRTGELGYLNPGVF 431
Query: 375 TQSRRWKDHADMLKQYATCLSRLLPKYNVTEPQIYFDIWVSINDRFQQRIFDPRVDIVQA 434
TQSRRWKDHADMLKQYATCLSRLLPKYNVTEPQIYFDIWVSINDRFQQRIFDPRVDIVQA
Sbjct: 432 TQSRRWKDHADMLKQYATCLSRLLPKYNVTEPQIYFDIWVSINDRFQQRIFDPRVDIVQA 491
Query: 435 AWSPFQRTSWVQPLLMDLSPWRAKLQEIKSSLDNHTEVVFIADFPGLHLENFVSEDLGNT 494
AWSPFQRTSWVQPLLMDLSPWRAKLQEIKSSLDNHTEVVFIADFPGLHLENFVSEDLGNT
Sbjct: 492 AWSPFQRTSWVQPLLMDLSPWRAKLQEIKSSLDNHTEVVFIADFPGLHLENFVSEDLGNT 551
Query: 495 SIQLLQGEVTVELVAEQKNQTLREGEKMQLPAGEYHKVYTTSPSPSCYMYVYVNTTELAL 554
SIQLLQGEVTVELVAEQKNQTLREGEKMQLPAGEYHKVYTTSPSPSCYMYVYVNTTELAL
Sbjct: 552 SIQLLQGEVTVELVAEQKNQTLREGEKMQLPAGEYHKVYTTSPSPSCYMYVYVNTTELAL 611
Query: 555 EQDLAYLQELKEKVENGSETGPLPPELQPLLEGEVKGGPEPTPLVQTFLRRQQRLQEIER 614
EQDLAYLQELKEKVENGSETGPLPPELQPLLEGEVKGGPEPTPLVQTFLRRQQRLQEIER
Sbjct: 612 EQDLAYLQELKEKVENGSETGPLPPELQPLLEGEVKGGPEPTPLVQTFLRRQQRLQEIER 671
Query: 615 RRNTPFHERFFRFLLRKLYVFRRSFLMTCISLRNLILGRPSLEQLAQEVTYANLRPFEAV 674
RRNTPFHERFFRFLLRKLYVFRRSFLMTCISLRNLILGRPSLEQLAQEVTYANLRPFEAV
Sbjct: 672 RRNTPFHERFFRFLLRKLYVFRRSFLMTCISLRNLILGRPSLEQLAQEVTYANLRPFEAV 731
Query: 675 GELNPSNTDSSHSNPPESNPDPVHSEF 701
GELNPSNTDSSHSNPPESNPDPVHSEF
Sbjct: 732 GELNPSNTDSSHSNPPESNPDPVHSEF 758
>gi|38348298 ankyrin repeat domain 45 [Homo sapiens]
Length = 266
Score = 36.2 bits (82), Expect = 0.11
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 17/81 (20%)
Query: 565 KEKVENGSETGPLPPELQPLLEGEVKGGPEPTPLVQTFLRRQQRLQEIERRRNTPFHERF 624
+E+ + ETGP P LQP L G+V+G LQ+I P HE+
Sbjct: 24 EEEAQEPEETGPKNPLLQPALTGDVEG-----------------LQKIFEDPENPHHEQA 66
Query: 625 FRFLLRKLYVFRRSFLMTCIS 645
+ LL + V R C++
Sbjct: 67 MQLLLEEDIVGRNLLYAACMA 87
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 35.0 bits (79), Expect = 0.24
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 567 KVENGSETGPLPPELQPLLEGEVKGGP--EPTPLVQTFLRRQQRLQEIERRR 616
+V N ETGP P L +V+ GP E + + L+ QQR +E+ER R
Sbjct: 109 EVLNSQETGPTLPRQNSQLPAQVQNGPSQEELEIQRRQLQEQQRQKELERER 160
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 35.0 bits (79), Expect = 0.24
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 567 KVENGSETGPLPPELQPLLEGEVKGGP--EPTPLVQTFLRRQQRLQEIERRR 616
+V N ETGP P L +V+ GP E + + L+ QQR +E+ER R
Sbjct: 109 EVLNSQETGPTLPRQNSQLPAQVQNGPSQEELEIQRRQLQEQQRQKELERER 160
>gi|114155133 dynein, axonemal, heavy chain 9 isoform 2 [Homo sapiens]
Length = 4486
Score = 31.2 bits (69), Expect = 3.4
Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 6/97 (6%)
Query: 385 DMLKQYATCLSRLLPKYNVTEPQIYFDIWVSINDRFQQRIFDPRVDIVQAAWSPFQRTSW 444
D+++ Y +R+ V E FD++ I ++ FD D V+ SP +
Sbjct: 2702 DLIRLYLHESNRVYRDKMVEEKD--FDLFDKIQTEVLKKTFDDIEDPVEQTQSPNLYCHF 2759
Query: 445 V----QPLLMDLSPWRAKLQEIKSSLDNHTEVVFIAD 477
+P M + W Q + +L+NH EV + D
Sbjct: 2760 ANGIGEPKYMPVQSWELLTQTLVEALENHNEVNTVMD 2796
>gi|87298937 centrosomal protein 110kDa [Homo sapiens]
Length = 2325
Score = 31.2 bits (69), Expect = 3.4
Identities = 33/152 (21%), Positives = 58/152 (38%), Gaps = 21/152 (13%)
Query: 422 QRIFDPRVDIVQAAWSPFQRTSWVQPLLMDLSPWRAKLQEIKSSLDNHTEVVFIADFPGL 481
+++ D + ++Q Q ++ + MD R +L E++S+L EV
Sbjct: 640 RKLRDEKETLLQRLTEVEQERDQLEIVAMDAENMRKELAELESALQEQHEV--------- 690
Query: 482 HLENFVSEDLGNTSIQLLQGEVTVELVAEQKNQTLREGEKMQLPAGEYHKVYTTSPSPSC 541
N S+Q QG+++ + LR+ E QL E KV +
Sbjct: 691 -----------NASLQQTQGDLSAYEAELEARLNLRDAEANQLKE-ELEKVTRLTQLEQS 738
Query: 542 YMYVYVNTTELALEQDLAYLQELKEKVENGSE 573
+ + AL+ L Q +EK + SE
Sbjct: 739 ALQAELEKERQALKNALGKAQFSEEKEQENSE 770
>gi|5031579 A-kinase anchor protein 8 [Homo sapiens]
Length = 692
Score = 30.8 bits (68), Expect = 4.5
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 610 QEIERRRNTPFHERFFRFLLRKLYVFRRSFLMTCISLRNLILGRPSLEQLAQEVTYANLR 669
+EI++ + FH+ RF+ KL FL I RN + + E + +E
Sbjct: 403 EEIQKHLQSKFHKETLRFISTKLPDKTVEFLQEYIVNRNKKIEKRRQELMEKETAKPKPD 462
Query: 670 PFEAVGE 676
PF+ +G+
Sbjct: 463 PFKGIGQ 469
>gi|21536320 heterogeneous nuclear ribonucleoprotein U-like 1
isoform d [Homo sapiens]
Length = 756
Score = 30.4 bits (67), Expect = 5.8
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 552 LALEQDLAYLQELKEKVENGSETGPLPPELQPL 584
L +EQ AY E+K +++ G+ T LPPE L
Sbjct: 29 LEMEQQQAYRPEMKTEMKQGAPTSFLPPEASQL 61
>gi|21536326 heterogeneous nuclear ribonucleoprotein U-like 1
isoform a [Homo sapiens]
Length = 856
Score = 30.4 bits (67), Expect = 5.8
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 552 LALEQDLAYLQELKEKVENGSETGPLPPELQPL 584
L +EQ AY E+K +++ G+ T LPPE L
Sbjct: 129 LEMEQQQAYRPEMKTEMKQGAPTSFLPPEASQL 161
>gi|4758532 ral guanine nucleotide dissociation stimulator-like 2
[Homo sapiens]
Length = 777
Score = 30.4 bits (67), Expect = 5.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 654 PSLEQLAQEVTYANLRPFEAVGELNPS---NTDSSHSNPPESNPDP 696
P L +LAQ + + ++ ++ E +PS D SH +PP S+P P
Sbjct: 565 PLLTRLAQHMKWPSVSSLDSALESSPSLHSPADPSHLSPPASSPRP 610
>gi|32307150 O-linked GlcNAc transferase isoform 2 [Homo sapiens]
Length = 1036
Score = 30.0 bits (66), Expect = 7.6
Identities = 17/103 (16%), Positives = 43/103 (41%)
Query: 380 WKDHADMLKQYATCLSRLLPKYNVTEPQIYFDIWVSINDRFQQRIFDPRVDIVQAAWSPF 439
W D+ + +K+ + ++ L K + + + ++ F++ I + ++ +
Sbjct: 469 WTDYDERMKKLVSIVADQLEKNRLPSVHPHHSMLYPLSHGFRKAIAERHGNLCLDKINVL 528
Query: 440 QRTSWVQPLLMDLSPWRAKLQEIKSSLDNHTEVVFIADFPGLH 482
+ + P + LS R ++ + S NH + PG+H
Sbjct: 529 HKPPYEHPKDLKLSDGRLRVGYVSSDFGNHPTSHLMQSIPGMH 571
>gi|32307148 O-linked GlcNAc transferase isoform 1 [Homo sapiens]
Length = 1046
Score = 30.0 bits (66), Expect = 7.6
Identities = 17/103 (16%), Positives = 43/103 (41%)
Query: 380 WKDHADMLKQYATCLSRLLPKYNVTEPQIYFDIWVSINDRFQQRIFDPRVDIVQAAWSPF 439
W D+ + +K+ + ++ L K + + + ++ F++ I + ++ +
Sbjct: 479 WTDYDERMKKLVSIVADQLEKNRLPSVHPHHSMLYPLSHGFRKAIAERHGNLCLDKINVL 538
Query: 440 QRTSWVQPLLMDLSPWRAKLQEIKSSLDNHTEVVFIADFPGLH 482
+ + P + LS R ++ + S NH + PG+H
Sbjct: 539 HKPPYEHPKDLKLSDGRLRVGYVSSDFGNHPTSHLMQSIPGMH 581
>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
Length = 1240
Score = 30.0 bits (66), Expect = 7.6
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 24/156 (15%)
Query: 477 DFPGLHLENFVSE--DLGNTSIQLLQGEVTVELVAEQKNQTLREGEKMQLPAGE------ 528
+F GL L + ++ DL + + L+Q E E AE + + LR + + + +
Sbjct: 220 EFIGLQLLDVLARLRDLEDADL-LIQLEAFEEAKAEDEEELLRVSGGVDMSSHQEVFASL 278
Query: 529 YHKVYTTSPSPSCYMYVYVNTTELALEQDLAYLQELKEKVEN----------GSETGPLP 578
+HKV S SP + V L LE L Q L E +E+ ++ L
Sbjct: 279 FHKV---SCSPVSAQLLSVLQGLLHLEPTLRSSQLLWEALESLVNRAVLLASDAQECTLE 335
Query: 579 PELQPLLEGEVKGGPEPTPLVQTFLRRQQRLQEIER 614
++ LL VKG P P+PLV+ Q L + +R
Sbjct: 336 EVVERLLS--VKGRPRPSPLVKAHKSVQANLDQSQR 369
>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
Length = 1249
Score = 30.0 bits (66), Expect = 7.6
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 24/156 (15%)
Query: 477 DFPGLHLENFVSE--DLGNTSIQLLQGEVTVELVAEQKNQTLREGEKMQLPAGE------ 528
+F GL L + ++ DL + + L+Q E E AE + + LR + + + +
Sbjct: 220 EFIGLQLLDVLARLRDLEDADL-LIQLEAFEEAKAEDEEELLRVSGGVDMSSHQEVFASL 278
Query: 529 YHKVYTTSPSPSCYMYVYVNTTELALEQDLAYLQELKEKVEN----------GSETGPLP 578
+HKV S SP + V L LE L Q L E +E+ ++ L
Sbjct: 279 FHKV---SCSPVSAQLLSVLQGLLHLEPTLRSSQLLWEALESLVNRAVLLASDAQECTLE 335
Query: 579 PELQPLLEGEVKGGPEPTPLVQTFLRRQQRLQEIER 614
++ LL VKG P P+PLV+ Q L + +R
Sbjct: 336 EVVERLLS--VKGRPRPSPLVKAHKSVQANLDQSQR 369
>gi|37622341 zinc finger protein 42 isoform 2 [Homo sapiens]
Length = 734
Score = 29.6 bits (65), Expect = 9.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 575 GPLPPELQPLLEGEVKGGPEPTPLVQTFLRRQ 606
G LPPE+Q ++G+ G PE + LRR+
Sbjct: 94 GALPPEIQARVQGQRPGSPEEAAALVDGLRRE 125
>gi|37622345 zinc finger protein 42 isoform 1 [Homo sapiens]
Length = 734
Score = 29.6 bits (65), Expect = 9.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 575 GPLPPELQPLLEGEVKGGPEPTPLVQTFLRRQ 606
G LPPE+Q ++G+ G PE + LRR+
Sbjct: 94 GALPPEIQARVQGQRPGSPEEAAALVDGLRRE 125
>gi|221316586 BSD domain containing 1 isoform d [Homo sapiens]
Length = 335
Score = 29.6 bits (65), Expect = 9.9
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 559 AYLQELKEKVENGSETGPLPP-ELQPLLEGEVKGGPEPTPLVQTFLRRQQ 607
A L+E V+ G ETGP PP +PL GGPEP P + R++
Sbjct: 217 ASLEEQGLAVDVG-ETGPSPPIHSKPLTPAGHTGGPEPRPPARVETLREE 265
>gi|221316584 BSD domain containing 1 isoform c [Homo sapiens]
Length = 374
Score = 29.6 bits (65), Expect = 9.9
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 559 AYLQELKEKVENGSETGPLPP-ELQPLLEGEVKGGPEPTPLVQTFLRRQQ 607
A L+E V+ G ETGP PP +PL GGPEP P + R++
Sbjct: 256 ASLEEQGLAVDVG-ETGPSPPIHSKPLTPAGHTGGPEPRPPARVETLREE 304
>gi|221316581 BSD domain containing 1 isoform a [Homo sapiens]
Length = 447
Score = 29.6 bits (65), Expect = 9.9
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 559 AYLQELKEKVENGSETGPLPP-ELQPLLEGEVKGGPEPTPLVQTFLRRQQ 607
A L+E V+ G ETGP PP +PL GGPEP P + R++
Sbjct: 329 ASLEEQGLAVDVG-ETGPSPPIHSKPLTPAGHTGGPEPRPPARVETLREE 377
>gi|221316578 BSD domain containing 1 isoform b [Homo sapiens]
Length = 430
Score = 29.6 bits (65), Expect = 9.9
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 559 AYLQELKEKVENGSETGPLPP-ELQPLLEGEVKGGPEPTPLVQTFLRRQQ 607
A L+E V+ G ETGP PP +PL GGPEP P + R++
Sbjct: 312 ASLEEQGLAVDVG-ETGPSPPIHSKPLTPAGHTGGPEPRPPARVETLREE 360
>gi|21264355 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin e1 [Homo sapiens]
Length = 411
Score = 29.6 bits (65), Expect = 9.9
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 490 DLGNTSIQLLQGEVTVELVAEQKNQTLREGEKMQLPAGEYHKVYTTSPSPSCYMYVYVNT 549
DL I + G + +L E+K + L E E ++ E K Y SP+ Y+ +
Sbjct: 90 DLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMKAYHNSPAYLAYINA-KSR 148
Query: 550 TELALEQDLAYLQELKEKVE 569
E ALE++ Q EK E
Sbjct: 149 AEAALEEESRQRQSRMEKGE 168
>gi|132566536 voltage-gated calcium channel alpha(2)delta-4 subunit
[Homo sapiens]
Length = 1137
Score = 29.6 bits (65), Expect = 9.9
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 210 GFLLFFDVSRSIGLFFVSYFHCMNSQLFSIGMFSYVMLASSPLFCSP 256
GF+L SR G F + +QL S+G+FS V + C P
Sbjct: 897 GFILISKRSRETGRFLGEVDGAVLTQLLSMGVFSQVTMYDYQAMCKP 943
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.139 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,537,160
Number of Sequences: 37866
Number of extensions: 1360041
Number of successful extensions: 3705
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 3672
Number of HSP's gapped (non-prelim): 45
length of query: 701
length of database: 18,247,518
effective HSP length: 109
effective length of query: 592
effective length of database: 14,120,124
effective search space: 8359113408
effective search space used: 8359113408
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.