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Search of human proteins with 21361619
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21361619 toll interacting protein [Homo sapiens]
(274 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21361619 toll interacting protein [Homo sapiens] 558 e-159
gi|194294523 intersectin 2 isoform 3 [Homo sapiens] 40 0.003
gi|194294521 intersectin 2 isoform 1 [Homo sapiens] 40 0.003
gi|8923665 CUE domain-containing 1 [Homo sapiens] 39 0.004
gi|227496489 multiple C2 domains, transmembrane 2 isoform 2 [Hom... 38 0.011
gi|227496440 multiple C2 domains, transmembrane 2 isoform 1 [Hom... 38 0.011
gi|227496504 multiple C2 domains, transmembrane 2 isoform 3 [Hom... 38 0.011
gi|21361472 neural precursor cell expressed, developmentally dow... 35 0.054
gi|222352090 neural precursor cell expressed, developmentally do... 35 0.054
gi|222352088 neural precursor cell expressed, developmentally do... 35 0.054
gi|222352086 neural precursor cell expressed, developmentally do... 35 0.054
gi|27477109 itchy homolog E3 ubiquitin protein ligase [Homo sapi... 35 0.054
gi|4506431 RAS p21 protein activator 1 isoform 1 [Homo sapiens] 34 0.12
gi|12545406 RAS p21 protein activator 1 isoform 2 [Homo sapiens] 34 0.12
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ... 34 0.16
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [... 34 0.16
gi|28376627 synaptotagmin IX [Homo sapiens] 34 0.16
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s... 33 0.21
gi|114520609 neural precursor cell expressed, developmentally do... 33 0.27
gi|14149680 extended synaptotagmin-like protein 1 [Homo sapiens] 33 0.35
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 33 0.35
gi|41352718 deltex homolog 1 [Homo sapiens] 32 0.78
gi|50582996 multiple C2 domains, transmembrane 1 isoform S [Homo... 31 1.3
gi|205361109 multiple C2 domains, transmembrane 1 isoform L [Hom... 31 1.3
gi|239752280 PREDICTED: similar to family with sequence similari... 30 3.0
gi|210032463 family with sequence similarity 48, member B2 [Homo... 30 3.0
gi|4557317 annexin A11 [Homo sapiens] 29 3.9
gi|22165433 annexin A11 [Homo sapiens] 29 3.9
gi|22165431 annexin A11 [Homo sapiens] 29 3.9
gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo s... 29 3.9
>gi|21361619 toll interacting protein [Homo sapiens]
Length = 274
Score = 558 bits (1437), Expect = e-159
Identities = 274/274 (100%), Positives = 274/274 (100%)
Query: 1 MATTVSTQRGPVYIGELPQDFLRITPTQQQRQVQLDAQAAQQLQYGGAVGTVGRLNITVV 60
MATTVSTQRGPVYIGELPQDFLRITPTQQQRQVQLDAQAAQQLQYGGAVGTVGRLNITVV
Sbjct: 1 MATTVSTQRGPVYIGELPQDFLRITPTQQQRQVQLDAQAAQQLQYGGAVGTVGRLNITVV 60
Query: 61 QAKLAKNYGMTRMDPYCRLRLGYAVYETPTAHNGAKNPRWNKVIHCTVPPGVDSFYLEIF 120
QAKLAKNYGMTRMDPYCRLRLGYAVYETPTAHNGAKNPRWNKVIHCTVPPGVDSFYLEIF
Sbjct: 61 QAKLAKNYGMTRMDPYCRLRLGYAVYETPTAHNGAKNPRWNKVIHCTVPPGVDSFYLEIF 120
Query: 121 DERAFSMDDRIAWTHITIPESLRQGKVEDKWYSLSGRQGDDKEGMINLVMSYALLPAAMV 180
DERAFSMDDRIAWTHITIPESLRQGKVEDKWYSLSGRQGDDKEGMINLVMSYALLPAAMV
Sbjct: 121 DERAFSMDDRIAWTHITIPESLRQGKVEDKWYSLSGRQGDDKEGMINLVMSYALLPAAMV 180
Query: 181 MPPQPVVLMPTVYQQGVGYVPITGMPAVCSPGMVPVALPPAAVNAQPRCSEEDLKAIQDM 240
MPPQPVVLMPTVYQQGVGYVPITGMPAVCSPGMVPVALPPAAVNAQPRCSEEDLKAIQDM
Sbjct: 181 MPPQPVVLMPTVYQQGVGYVPITGMPAVCSPGMVPVALPPAAVNAQPRCSEEDLKAIQDM 240
Query: 241 FPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEEP 274
FPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEEP
Sbjct: 241 FPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEEP 274
>gi|194294523 intersectin 2 isoform 3 [Homo sapiens]
Length = 1670
Score = 39.7 bits (91), Expect = 0.003
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 52 VGRLNITVVQA---KLAKNYGMTRMDPYCRLRLGYAVYETPTAHNGAKNPRWNKVIHCTV 108
+GRL + V++A K K G + +PYC + +G Y T T + NP+WN +
Sbjct: 1541 IGRLMVHVIEATELKACKPNG--KSNPYCEISMGSQSYTTRTIQD-TLNPKWNFNCQFFI 1597
Query: 109 PP-GVDSFYLEIFDERAFSMDDRIAWTHITI 138
D L +FD FS DD + T I +
Sbjct: 1598 KDLYQDVLCLTLFDRDQFSPDDFLGRTEIPV 1628
>gi|194294521 intersectin 2 isoform 1 [Homo sapiens]
Length = 1697
Score = 39.7 bits (91), Expect = 0.003
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 52 VGRLNITVVQA---KLAKNYGMTRMDPYCRLRLGYAVYETPTAHNGAKNPRWNKVIHCTV 108
+GRL + V++A K K G + +PYC + +G Y T T + NP+WN +
Sbjct: 1568 IGRLMVHVIEATELKACKPNG--KSNPYCEISMGSQSYTTRTIQD-TLNPKWNFNCQFFI 1624
Query: 109 PP-GVDSFYLEIFDERAFSMDDRIAWTHITI 138
D L +FD FS DD + T I +
Sbjct: 1625 KDLYQDVLCLTLFDRDQFSPDDFLGRTEIPV 1655
>gi|8923665 CUE domain-containing 1 [Homo sapiens]
Length = 386
Score = 39.3 bits (90), Expect = 0.004
Identities = 19/34 (55%), Positives = 22/34 (64%)
Query: 240 MFPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEE 273
MFPNMD ++I VL A G DA I+ LLQM E
Sbjct: 57 MFPNMDYDIIECVLRANSGAVDATIDQLLQMNLE 90
>gi|227496489 multiple C2 domains, transmembrane 2 isoform 2 [Homo
sapiens]
Length = 823
Score = 37.7 bits (86), Expect = 0.011
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 49 VGTVGRLNITVVQAK--LAKNYGMTRMDPYCRLRLGYAVYETPTAHNGAKNPRWNKVIHC 106
V VG L + V++A LA ++ + DP+C L LG +T T + NP WNKV
Sbjct: 505 VKDVGILQVKVLKAADLLAADFS-GKSDPFCLLELGNDRLQTHTVYKNL-NPEWNKVFTF 562
Query: 107 TVPPGVDSFYLEIFDE 122
+ D + +FDE
Sbjct: 563 PIKDIHDVLEVTVFDE 578
>gi|227496440 multiple C2 domains, transmembrane 2 isoform 1 [Homo
sapiens]
Length = 878
Score = 37.7 bits (86), Expect = 0.011
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 49 VGTVGRLNITVVQAK--LAKNYGMTRMDPYCRLRLGYAVYETPTAHNGAKNPRWNKVIHC 106
V VG L + V++A LA ++ + DP+C L LG +T T + NP WNKV
Sbjct: 505 VKDVGILQVKVLKAADLLAADFS-GKSDPFCLLELGNDRLQTHTVYKNL-NPEWNKVFTF 562
Query: 107 TVPPGVDSFYLEIFDE 122
+ D + +FDE
Sbjct: 563 PIKDIHDVLEVTVFDE 578
>gi|227496504 multiple C2 domains, transmembrane 2 isoform 3 [Homo
sapiens]
Length = 306
Score = 37.7 bits (86), Expect = 0.011
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 49 VGTVGRLNITVVQAK--LAKNYGMTRMDPYCRLRLGYAVYETPTAHNGAKNPRWNKVIHC 106
V VG L + V++A LA ++ + DP+C L LG +T T + NP WNKV
Sbjct: 93 VKDVGILQVKVLKAADLLAADFS-GKSDPFCLLELGNDRLQTHTVYKNL-NPEWNKVFTF 150
Query: 107 TVPPGVDSFYLEIFDE 122
+ D + +FDE
Sbjct: 151 PIKDIHDVLEVTVFDE 166
>gi|21361472 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 3 [Homo sapiens]
Length = 955
Score = 35.4 bits (80), Expect = 0.054
Identities = 34/132 (25%), Positives = 53/132 (40%), Gaps = 15/132 (11%)
Query: 55 LNITVVQA-KLAKNYGMTRMDPYCRLRL-------GYAVYETPTAHNGAKNPRWNKVIHC 106
L + VV LAK DPY +L L A+ +T T NP+WN+ +
Sbjct: 22 LRVKVVSGIDLAKKDIFGASDPYVKLSLYVADENRELALVQTKTIKK-TLNPKWNEEFYF 80
Query: 107 TVPPGVDSFYLEIFDERAFSMDD-----RIAWTHITIPESLRQGKVEDKWYSLSGRQGDD 161
V P E+FDE + DD + +H+ + + K + L R
Sbjct: 81 RVNPSNHRLLFEVFDENRLTRDDFLGQVDVPLSHLPTEDPTMERPYTFKDFLLRPRSHKS 140
Query: 162 K-EGMINLVMSY 172
+ +G + L M+Y
Sbjct: 141 RVKGFLRLKMAY 152
>gi|222352090 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 5 [Homo sapiens]
Length = 947
Score = 35.4 bits (80), Expect = 0.054
Identities = 34/132 (25%), Positives = 53/132 (40%), Gaps = 15/132 (11%)
Query: 55 LNITVVQA-KLAKNYGMTRMDPYCRLRL-------GYAVYETPTAHNGAKNPRWNKVIHC 106
L + VV LAK DPY +L L A+ +T T NP+WN+ +
Sbjct: 14 LRVKVVSGIDLAKKDIFGASDPYVKLSLYVADENRELALVQTKTIKK-TLNPKWNEEFYF 72
Query: 107 TVPPGVDSFYLEIFDERAFSMDD-----RIAWTHITIPESLRQGKVEDKWYSLSGRQGDD 161
V P E+FDE + DD + +H+ + + K + L R
Sbjct: 73 RVNPSNHRLLFEVFDENRLTRDDFLGQVDVPLSHLPTEDPTMERPYTFKDFLLRPRSHKS 132
Query: 162 K-EGMINLVMSY 172
+ +G + L M+Y
Sbjct: 133 RVKGFLRLKMAY 144
>gi|222352088 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 4 [Homo sapiens]
Length = 967
Score = 35.4 bits (80), Expect = 0.054
Identities = 34/132 (25%), Positives = 53/132 (40%), Gaps = 15/132 (11%)
Query: 55 LNITVVQA-KLAKNYGMTRMDPYCRLRL-------GYAVYETPTAHNGAKNPRWNKVIHC 106
L + VV LAK DPY +L L A+ +T T NP+WN+ +
Sbjct: 14 LRVKVVSGIDLAKKDIFGASDPYVKLSLYVADENRELALVQTKTIKK-TLNPKWNEEFYF 72
Query: 107 TVPPGVDSFYLEIFDERAFSMDD-----RIAWTHITIPESLRQGKVEDKWYSLSGRQGDD 161
V P E+FDE + DD + +H+ + + K + L R
Sbjct: 73 RVNPSNHRLLFEVFDENRLTRDDFLGQVDVPLSHLPTEDPTMERPYTFKDFLLRPRSHKS 132
Query: 162 K-EGMINLVMSY 172
+ +G + L M+Y
Sbjct: 133 RVKGFLRLKMAY 144
>gi|222352086 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 1 [Homo sapiens]
Length = 975
Score = 35.4 bits (80), Expect = 0.054
Identities = 34/132 (25%), Positives = 53/132 (40%), Gaps = 15/132 (11%)
Query: 55 LNITVVQA-KLAKNYGMTRMDPYCRLRL-------GYAVYETPTAHNGAKNPRWNKVIHC 106
L + VV LAK DPY +L L A+ +T T NP+WN+ +
Sbjct: 22 LRVKVVSGIDLAKKDIFGASDPYVKLSLYVADENRELALVQTKTIKK-TLNPKWNEEFYF 80
Query: 107 TVPPGVDSFYLEIFDERAFSMDD-----RIAWTHITIPESLRQGKVEDKWYSLSGRQGDD 161
V P E+FDE + DD + +H+ + + K + L R
Sbjct: 81 RVNPSNHRLLFEVFDENRLTRDDFLGQVDVPLSHLPTEDPTMERPYTFKDFLLRPRSHKS 140
Query: 162 K-EGMINLVMSY 172
+ +G + L M+Y
Sbjct: 141 RVKGFLRLKMAY 152
>gi|27477109 itchy homolog E3 ubiquitin protein ligase [Homo
sapiens]
Length = 862
Score = 35.4 bits (80), Expect = 0.054
Identities = 28/128 (21%), Positives = 57/128 (44%), Gaps = 3/128 (2%)
Query: 37 AQAAQQLQYGGAVGTVGRLNITVVQAKLAKN-YGMTRMDPYCRLRLGYAVYETPTAHNGA 95
+ + QL G++ +L ITV+ AKL +N PY + + +T +N
Sbjct: 2 SDSGSQLGSMGSLTMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNN-T 60
Query: 96 KNPRWNKVIHCTVPPGVDSFYLEIFDERAFSMDDRIAWTHITIPESLRQGKVEDKWYSLS 155
+P+W + + V P V + ++ + D + + I E+L+ ++ + ++
Sbjct: 61 NSPKWKQPLTVIVTP-VSKLHFRVWSHQTLKSDVLLGTAALDIYETLKSNNMKLEEVVVT 119
Query: 156 GRQGDDKE 163
+ G DKE
Sbjct: 120 LQLGGDKE 127
>gi|4506431 RAS p21 protein activator 1 isoform 1 [Homo sapiens]
Length = 1047
Score = 34.3 bits (77), Expect = 0.12
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 74 DPYCRLRLGYAVYETPTAHNGAKNPRWN-KVIHCTVPPGVDSFYLEIFDERAFSMDDRIA 132
+PYC + L +V T +NP W+ + + +PP ++ F + + ++ S D I
Sbjct: 613 NPYCNIYLN-SVQVAKTHAREGQNPVWSEEFVFDDLPPDINRFEITLSNKTKKSKDPDIL 671
Query: 133 WTHITIPESLRQGKVEDKWYSLS 155
+ + L++G D+W+ LS
Sbjct: 672 FMRCQL-SRLQKGHATDEWFLLS 693
>gi|12545406 RAS p21 protein activator 1 isoform 2 [Homo sapiens]
Length = 870
Score = 34.3 bits (77), Expect = 0.12
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 74 DPYCRLRLGYAVYETPTAHNGAKNPRWN-KVIHCTVPPGVDSFYLEIFDERAFSMDDRIA 132
+PYC + L +V T +NP W+ + + +PP ++ F + + ++ S D I
Sbjct: 436 NPYCNIYLN-SVQVAKTHAREGQNPVWSEEFVFDDLPPDINRFEITLSNKTKKSKDPDIL 494
Query: 133 WTHITIPESLRQGKVEDKWYSLS 155
+ + L++G D+W+ LS
Sbjct: 495 FMRCQL-SRLQKGHATDEWFLLS 516
>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2
[Homo sapiens]
Length = 1132
Score = 33.9 bits (76), Expect = 0.16
Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 18/103 (17%)
Query: 136 ITIPESLRQGKVEDKWYSLS----------GRQGDDKEGMINLVMSYALLPAAMVMPPQP 185
I+IP S G ED LS G +G+ + G + A+ PAA P P
Sbjct: 746 ISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTP 805
Query: 186 VVLMPT--VYQQGVGYVPITGMPAVCS------PGMVPVALPP 220
V P + QGV P+ G+ A + PG++P+ PP
Sbjct: 806 PVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPP 848
>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1
[Homo sapiens]
Length = 1147
Score = 33.9 bits (76), Expect = 0.16
Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 18/103 (17%)
Query: 136 ITIPESLRQGKVEDKWYSLS----------GRQGDDKEGMINLVMSYALLPAAMVMPPQP 185
I+IP S G ED LS G +G+ + G + A+ PAA P P
Sbjct: 761 ISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTP 820
Query: 186 VVLMPT--VYQQGVGYVPITGMPAVCS------PGMVPVALPP 220
V P + QGV P+ G+ A + PG++P+ PP
Sbjct: 821 PVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPP 863
>gi|28376627 synaptotagmin IX [Homo sapiens]
Length = 491
Score = 33.9 bits (76), Expect = 0.16
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 51 TVGRLNITVVQAKLAKNYGMT-RMDPYCRLRL---GYAVYETPTA-HNGAKNPRWNKVIH 105
T GRL IT+++A+ K +T DPY ++ L G + + T+ NP +N+ I
Sbjct: 365 TAGRLTITIIKARNLKAMDITGASDPYVKVSLMCDGRRLKKRKTSTKRNTLNPVYNEAIV 424
Query: 106 CTVPP-GVDSFYLEI 119
VPP +D +L I
Sbjct: 425 FDVPPENIDQIHLSI 439
>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
sapiens]
Length = 4911
Score = 33.5 bits (75), Expect = 0.21
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Query: 138 IPESLRQGKVEDKWYSLSGRQGDDKEGMINLVMSYA-LLPAAMVMPPQPVVLMPTVYQQG 196
+ + + G + K Y + G D E + V+S A P + PP P L+P Q
Sbjct: 1496 LDKMVTDGAILGKLYKIPELGGKDVEDLFTAVLSPANTQPTPLPQPPPPTQLLPIHNQDA 1555
Query: 197 VGYVPITGMPAVCSPGMVPVALPPAA 222
+P+ SP + +LPP +
Sbjct: 1556 FSRMPLMNGLIGSSPHLPHNSLPPGS 1581
>gi|114520609 neural precursor cell expressed, developmentally
down-regulated 4 isoform 1 [Homo sapiens]
Length = 900
Score = 33.1 bits (74), Expect = 0.27
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Query: 64 LAKNYGMTRMDPYCRLRL-----GYAVYETPTAHNGAKNPRWNKVIHCTVPPGVDSFYLE 118
LAK + DPY R+ L G + NP+WN+ I V P E
Sbjct: 31 LAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFE 90
Query: 119 IFDERAFSMDD 129
+FDE + DD
Sbjct: 91 VFDENRLTRDD 101
>gi|14149680 extended synaptotagmin-like protein 1 [Homo sapiens]
Length = 1104
Score = 32.7 bits (73), Expect = 0.35
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Query: 72 RMDPYCRLRLGYAVYETPTAHNGAKNPRWNKVIHCTVP--PGVDSFYLEIFDERAFSMDD 129
+ DPY +L+L + + NPRWN+V V PG +E+FD + DD
Sbjct: 673 KSDPYVKLKLAGRSFRSHVVREDL-NPRWNEVFEVIVTSVPG-QELEVEVFD-KDLDKDD 729
Query: 130 RIAWTHITIPESLRQGKVEDKWYSL 154
+ + + L G + D+W +L
Sbjct: 730 FLGRCKVRLTTVLNSGFL-DEWLTL 753
Score = 32.3 bits (72), Expect = 0.46
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 72 RMDPYCRLRLGYAVYETPTAHNGAKNPRWNKVIHCTVP--PGVDSFYLEIFDERAFSMDD 129
+ DPY +RLG + + NP+W + V PG + +E+FD+ DD
Sbjct: 355 KSDPYALVRLGTQTFCSRVIDEEL-NPQWGETYEVMVHEVPGQE-IEVEVFDKDP-DKDD 411
Query: 130 RIAWTHITIPESLRQGKVEDKWYSLSGRQG 159
+ + + + L Q V D W+ L G QG
Sbjct: 412 FLGRMKLDVGKVL-QASVLDDWFPLQGGQG 440
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
[Homo sapiens]
Length = 1125
Score = 32.7 bits (73), Expect = 0.35
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 154 LSGRQGDDKEGMINLVMSYALLPAAMVMPPQPVVLMPT--VYQQGVGYVPITGMPAVCS- 210
+SG +G+ + G + A+ PAA P P V P + QGV P+ G+ A +
Sbjct: 767 VSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTG 826
Query: 211 -----PGMVPVALPP 220
PG++P+ PP
Sbjct: 827 LLGARPGLIPLQRPP 841
>gi|41352718 deltex homolog 1 [Homo sapiens]
Length = 620
Score = 31.6 bits (70), Expect = 0.78
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 164 GMINLVMSYALLPAAMVMPPQPVVLMPTVYQQGVGYVPITGMPAVC 209
GM +++ A LP + P+P++ P V + V P+ G+P VC
Sbjct: 335 GMTGILLCAAGLPVCLTRAPKPILHPPPVSKSDV--KPVPGVPGVC 378
>gi|50582996 multiple C2 domains, transmembrane 1 isoform S [Homo
sapiens]
Length = 778
Score = 30.8 bits (68), Expect = 1.3
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 5/108 (4%)
Query: 52 VGRLNITVVQAKLAKNYGMT-RMDPYCRLRLGYAVYETPTAHNGAKNPRWNKVIHCTVPP 110
VG L + V++A+ +T + DP+C + L T T + NP WNKV +
Sbjct: 404 VGFLQVKVIRAEGLMAADVTGKSDPFCVVELNNDRLLTHTVYKNL-NPEWNKVFTFNIKD 462
Query: 111 GVDSFYLEIFDERAFSMDDRIAWTHITIPESLRQGKVEDKWYSLSGRQ 158
+ ++DE D + I + S++ G E K Y L +Q
Sbjct: 463 IHSVLEVTVYDEDRDRSADFLGKVAIPL-LSIQNG--EQKAYVLKNKQ 507
>gi|205361109 multiple C2 domains, transmembrane 1 isoform L [Homo
sapiens]
Length = 999
Score = 30.8 bits (68), Expect = 1.3
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 5/108 (4%)
Query: 52 VGRLNITVVQAKLAKNYGMT-RMDPYCRLRLGYAVYETPTAHNGAKNPRWNKVIHCTVPP 110
VG L + V++A+ +T + DP+C + L T T + NP WNKV +
Sbjct: 625 VGFLQVKVIRAEGLMAADVTGKSDPFCVVELNNDRLLTHTVYKNL-NPEWNKVFTFNIKD 683
Query: 111 GVDSFYLEIFDERAFSMDDRIAWTHITIPESLRQGKVEDKWYSLSGRQ 158
+ ++DE D + I + S++ G E K Y L +Q
Sbjct: 684 IHSVLEVTVYDEDRDRSADFLGKVAIPL-LSIQNG--EQKAYVLKNKQ 728
>gi|239752280 PREDICTED: similar to family with sequence similarity
48, member B2 [Homo sapiens]
Length = 779
Score = 29.6 bits (65), Expect = 3.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 11 PVYIGELPQDFLRITPTQQQRQVQLDAQAAQQLQ 44
P +G+ PQ L + P Q +Q+QL Q + LQ
Sbjct: 707 PFVLGQQPQPLLLLQPQPQPQQIQLQTQPLRVLQ 740
>gi|210032463 family with sequence similarity 48, member B2 [Homo
sapiens]
Length = 817
Score = 29.6 bits (65), Expect = 3.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 11 PVYIGELPQDFLRITPTQQQRQVQLDAQAAQQLQ 44
P +G+ PQ L + P Q +Q+QL Q + LQ
Sbjct: 745 PFVLGQQPQPLLLLQPQPQPQQIQLQTQPLRVLQ 778
>gi|4557317 annexin A11 [Homo sapiens]
Length = 505
Score = 29.3 bits (64), Expect = 3.9
Identities = 23/49 (46%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Query: 171 SYALLPAAMVMPPQPVVLMPTVYQQGVGYVPITGMPAVCSPGMVPVALP 219
SY P A V P QP MP QQ G P G P V PG PV LP
Sbjct: 119 SYPPYPGAPV-PGQP---MPPPGQQPPGAYP--GQPPVTYPGQPPVPLP 161
>gi|22165433 annexin A11 [Homo sapiens]
Length = 505
Score = 29.3 bits (64), Expect = 3.9
Identities = 23/49 (46%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Query: 171 SYALLPAAMVMPPQPVVLMPTVYQQGVGYVPITGMPAVCSPGMVPVALP 219
SY P A V P QP MP QQ G P G P V PG PV LP
Sbjct: 119 SYPPYPGAPV-PGQP---MPPPGQQPPGAYP--GQPPVTYPGQPPVPLP 161
>gi|22165431 annexin A11 [Homo sapiens]
Length = 505
Score = 29.3 bits (64), Expect = 3.9
Identities = 23/49 (46%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Query: 171 SYALLPAAMVMPPQPVVLMPTVYQQGVGYVPITGMPAVCSPGMVPVALP 219
SY P A V P QP MP QQ G P G P V PG PV LP
Sbjct: 119 SYPPYPGAPV-PGQP---MPPPGQQPPGAYP--GQPPVTYPGQPPVPLP 161
>gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 29.3 bits (64), Expect = 3.9
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Query: 176 PAAMVMPPQPVVLMPTVYQQGVGYVPITGMPAVCSPGMVPV---ALPPAAVNAQPRCS 230
P + +P P + T VP G+P +PG++P LPP P+ S
Sbjct: 646 PGPIPVPAPPQIATSTSLLAAQSLVPPPGLPGSSTPGVLPYFPPGLPPPDAGGAPQSS 703
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,023,704
Number of Sequences: 37866
Number of extensions: 499843
Number of successful extensions: 1345
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 1322
Number of HSP's gapped (non-prelim): 73
length of query: 274
length of database: 18,247,518
effective HSP length: 101
effective length of query: 173
effective length of database: 14,423,052
effective search space: 2495187996
effective search space used: 2495187996
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.