BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|21361380 EAP30 subunit of ELL complex [Homo sapiens] (258 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|21361380 EAP30 subunit of ELL complex [Homo sapiens] 514 e-146 gi|157671945 hypothetical protein LOC79974 isoform 1 [Homo sapiens] 35 0.065 gi|71051598 vacuolar protein sorting 36 [Homo sapiens] 32 0.42 gi|19923345 RNA binding motif protein 12 [Homo sapiens] 32 0.55 gi|23510462 RNA binding motif protein 12 [Homo sapiens] 32 0.55 gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 32 0.72 gi|93102364 SWAP-70 protein [Homo sapiens] 32 0.72 gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens] 31 1.2 gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens] 31 1.2 gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens] 31 1.2 gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s... 30 2.7 gi|41872583 Rho-associated, coiled-coil containing protein kinas... 29 3.6 gi|4503327 cytochrome b5 reductase 3 isoform m [Homo sapiens] 29 3.6 gi|193794826 cytochrome b5 reductase 3 isoform s [Homo sapiens] 29 3.6 gi|6552328 cytochrome b5 reductase 3 isoform s [Homo sapiens] 29 3.6 gi|45446749 kinesin family member 5A [Homo sapiens] 29 3.6 gi|226371725 FCH domain only 2 isoform b [Homo sapiens] 29 4.6 gi|226371723 FCH domain only 2 isoform a [Homo sapiens] 29 4.6 gi|45439370 TAO kinase 1 [Homo sapiens] 28 6.1 gi|150010552 FK506 binding protein 15, 133kDa [Homo sapiens] 28 6.1 gi|44890052 stathmin 1 isoform a [Homo sapiens] 28 7.9 gi|44890050 stathmin 1 isoform a [Homo sapiens] 28 7.9 gi|5031851 stathmin 1 isoform a [Homo sapiens] 28 7.9 gi|4758648 kinesin family member 5B [Homo sapiens] 28 7.9 >gi|21361380 EAP30 subunit of ELL complex [Homo sapiens] Length = 258 Score = 514 bits (1323), Expect = e-146 Identities = 258/258 (100%), Positives = 258/258 (100%) Query: 1 MHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRK 60 MHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRK Sbjct: 1 MHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRK 60 Query: 61 NPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT 120 NPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT Sbjct: 61 NPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT 120 Query: 121 LEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDH 180 LEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDH Sbjct: 121 LEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDH 180 Query: 181 TVVLQLAEKNGYVTVSEIKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLPALF 240 TVVLQLAEKNGYVTVSEIKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLPALF Sbjct: 181 TVVLQLAEKNGYVTVSEIKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLPALF 240 Query: 241 TDLYSQEITAEEAREALP 258 TDLYSQEITAEEAREALP Sbjct: 241 TDLYSQEITAEEAREALP 258 >gi|157671945 hypothetical protein LOC79974 isoform 1 [Homo sapiens] Length = 1026 Score = 35.0 bits (79), Expect = 0.065 Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 6/80 (7%) Query: 116 GGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAE 175 GG+ L H Q++ + + +++L+ + +K LG GF + G +L QS Sbjct: 859 GGVQWLNSNHLQIIH------KVLKRENLLNILVIIKTLGIGFHLPVDGVHFLTQSEVQN 912 Query: 176 LNMDHTVVLQLAEKNGYVTV 195 L ++ ++L A+K+GY V Sbjct: 913 LWKENLIILDTAKKHGYEVV 932 >gi|71051598 vacuolar protein sorting 36 [Homo sapiens] Length = 386 Score = 32.3 bits (72), Expect = 0.42 Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 13/155 (8%) Query: 4 RGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQ-MSKQLDMFKTNLEEFASKHKQEIRKNP 62 R VG I +K + K ++ A + L++ M K +M + + + A+K K + Sbjct: 152 RAVGIVGIERKLEEKRKETDKNISEAFEDLSKLMIKAKEMVELS-KSIANKIKDKQGDIT 210 Query: 63 EFR-VQFQDMCATIGV-DPLASGKGFWSEMLGVGDFYY-ELGVQIIEVCLALKHRNGGLI 119 E ++F+ ++G+ +P+ E G G Y+ +L Q+ + GG++ Sbjct: 211 EDETIRFKSYLLSMGIANPVTR------ETYGSGTQYHMQLAKQLAGILQVPLEERGGIM 264 Query: 120 TLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKAL 154 +L E++ V + RG + +S +DL+ A K L+AL Sbjct: 265 SLTEVYCLVNRARG--MELLSPEDLVNACKMLEAL 297 >gi|19923345 RNA binding motif protein 12 [Homo sapiens] Length = 932 Score = 32.0 bits (71), Expect = 0.55 Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 20/151 (13%) Query: 36 MSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGD 95 M +++DM + L+ F S ++E+ NPE V +CA I P + K + V Sbjct: 510 MLEKIDMIRKRLQNF-SYDQREMILNPEGDVNSAKVCAHITNIPFSITK------MDVLQ 562 Query: 96 FYYELGVQIIEVCLALKHRNGGLITL-------------EELHQQVLKGRGKFAQDVSQD 142 F + V V + + + GL E LH++ L GR F V+ + Sbjct: 563 FLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLE 622 Query: 143 DLIRAIKKLKALGTGFGIIPVGGTYLIQSVP 173 D+ K A G +PV G + +P Sbjct: 623 DMREIEKNPPAQGKKGLKMPVPGNPAVPGMP 653 >gi|23510462 RNA binding motif protein 12 [Homo sapiens] Length = 932 Score = 32.0 bits (71), Expect = 0.55 Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 20/151 (13%) Query: 36 MSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGD 95 M +++DM + L+ F S ++E+ NPE V +CA I P + K + V Sbjct: 510 MLEKIDMIRKRLQNF-SYDQREMILNPEGDVNSAKVCAHITNIPFSITK------MDVLQ 562 Query: 96 FYYELGVQIIEVCLALKHRNGGLITL-------------EELHQQVLKGRGKFAQDVSQD 142 F + V V + + + GL E LH++ L GR F V+ + Sbjct: 563 FLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVVTLE 622 Query: 143 DLIRAIKKLKALGTGFGIIPVGGTYLIQSVP 173 D+ K A G +PV G + +P Sbjct: 623 DMREIEKNPPAQGKKGLKMPVPGNPAVPGMP 653 >gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] Length = 1960 Score = 31.6 bits (70), Expect = 0.72 Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 16/87 (18%) Query: 5 GVGAGAIAKKKLAEAKY--------KERG-TVLAEDQLAQMSKQLDMFKTNL-------E 48 G GA A+ +K+ EA+ +E+G T L D+L + + Q+D T+L + Sbjct: 1715 GKGALALEEKRRLEARIAQLEEELEEEQGNTELINDRLKKANLQIDQINTDLNLERSHAQ 1774 Query: 49 EFASKHKQEIRKNPEFRVQFQDMCATI 75 + + +Q R+N E +V+ Q+M T+ Sbjct: 1775 KNENARQQLERQNKELKVKLQEMEGTV 1801 >gi|93102364 SWAP-70 protein [Homo sapiens] Length = 585 Score = 31.6 bits (70), Expect = 0.72 Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 4/66 (6%) Query: 11 IAKKKLAEAKYKERGTVLAEDQLAQMSKQ--LDMFKTNLEEFASKHKQEIRKNPEFRVQF 68 + KK+LAE + ER + E Q A SKQ L+ + LEE AS+ +E +K + +V+ Sbjct: 326 LRKKQLAEQEELERQ--MKELQAANESKQQELEAVRKKLEEAASRAAEEEKKRLQTQVEL 383 Query: 69 QDMCAT 74 Q +T Sbjct: 384 QARFST 389 >gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens] Length = 2003 Score = 30.8 bits (68), Expect = 1.2 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 2/50 (4%) Query: 13 KKKLAEAKYK--ERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRK 60 +K EAK K E +L EDQ +++SK+ + + L EF+S+ +E K Sbjct: 997 EKVTTEAKMKKFEEDLLLLEDQNSKLSKERKLLEDRLAEFSSQAAEEEEK 1046 >gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens] Length = 1995 Score = 30.8 bits (68), Expect = 1.2 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 2/50 (4%) Query: 13 KKKLAEAKYK--ERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRK 60 +K EAK K E +L EDQ +++SK+ + + L EF+S+ +E K Sbjct: 989 EKVTTEAKMKKFEEDLLLLEDQNSKLSKERKLLEDRLAEFSSQAAEEEEK 1038 >gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens] Length = 2036 Score = 30.8 bits (68), Expect = 1.2 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 2/50 (4%) Query: 13 KKKLAEAKYK--ERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRK 60 +K EAK K E +L EDQ +++SK+ + + L EF+S+ +E K Sbjct: 1030 EKVTTEAKMKKFEEDLLLLEDQNSKLSKERKLLEDRLAEFSSQAAEEEEK 1079 >gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo sapiens] Length = 4911 Score = 29.6 bits (65), Expect = 2.7 Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 5/73 (6%) Query: 6 VGAGAIAKKKLA--EAKYKERGTVLAED---QLAQMSKQLDMFKTNLEEFASKHKQEIRK 60 +GA +KK L+ + K+ G E+ QL +++Q M + LE+ + K+ Sbjct: 3202 IGAHRKSKKALSAKQRTAKKAGREFPEEDAEQLKHVTEQQSMVQKQLEQIRKQQKEHAEL 3261 Query: 61 NPEFRVQFQDMCA 73 ++R++ Q CA Sbjct: 3262 IEDYRIKQQQQCA 3274 >gi|41872583 Rho-associated, coiled-coil containing protein kinase 2 [Homo sapiens] Length = 1388 Score = 29.3 bits (64), Expect = 3.6 Identities = 14/63 (22%), Positives = 32/63 (50%) Query: 16 LAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATI 75 L +A ++ +AE+Q + + K+ M + ++E ++HKQE+ + ++ T+ Sbjct: 919 LTKADSEQLARSIAEEQYSDLEKEKIMKELEIKEMMARHKQELTEKDATIASLEETNRTL 978 Query: 76 GVD 78 D Sbjct: 979 TSD 981 >gi|4503327 cytochrome b5 reductase 3 isoform m [Homo sapiens] Length = 301 Score = 29.3 bits (64), Expect = 3.6 Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 5/57 (8%) Query: 128 VLKGRGKFA--QDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTV 182 V +G+GKFA D + +IR +K + + G GI P+ +I+++ + + DHTV Sbjct: 150 VYQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPM--LQVIRAIMKDPD-DHTV 203 >gi|193794826 cytochrome b5 reductase 3 isoform s [Homo sapiens] Length = 278 Score = 29.3 bits (64), Expect = 3.6 Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 5/57 (8%) Query: 128 VLKGRGKFA--QDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTV 182 V +G+GKFA D + +IR +K + + G GI P+ +I+++ + + DHTV Sbjct: 127 VYQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPM--LQVIRAIMKDPD-DHTV 180 >gi|6552328 cytochrome b5 reductase 3 isoform s [Homo sapiens] Length = 278 Score = 29.3 bits (64), Expect = 3.6 Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 5/57 (8%) Query: 128 VLKGRGKFA--QDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTV 182 V +G+GKFA D + +IR +K + + G GI P+ +I+++ + + DHTV Sbjct: 127 VYQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPM--LQVIRAIMKDPD-DHTV 180 >gi|45446749 kinesin family member 5A [Homo sapiens] Length = 1032 Score = 29.3 bits (64), Expect = 3.6 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 6/54 (11%) Query: 14 KKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQ 67 KK AE + ++ G + ++ Q ++ + NLE+ HKQ +R N + R + Sbjct: 810 KKSAEMEPEDSGGIHSQKQ------KISFLENNLEQLTKVHKQLVRDNADLRCE 857 >gi|226371725 FCH domain only 2 isoform b [Homo sapiens] Length = 777 Score = 28.9 bits (63), Expect = 4.6 Identities = 40/162 (24%), Positives = 65/162 (40%), Gaps = 27/162 (16%) Query: 9 GAIAKKKLA---------EAKYKERGTVLAED-----QLAQMSKQLDMFKTNLEEFASKH 54 G I+ K+LA E Y T LA+ QL + D+FKT+ E+ A+ H Sbjct: 28 GQISTKELADFVRERATIEEAYSRSMTKLAKSASNYSQLGTFAPVWDVFKTSTEKLANCH 87 Query: 55 KQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHR 114 +RK E + Q G + + S K E+ G + VQ I+ + Sbjct: 88 LDLVRKLQELIKEVQ----KYGEEQVKSHKKTKEEVAGTLE-----AVQTIQSITQALQK 138 Query: 115 NGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGT 156 + + + Q+ LK G +++ + A+K KA T Sbjct: 139 SKENYNAKCVEQERLKKEGATQREIEK----AAVKSKKATDT 176 >gi|226371723 FCH domain only 2 isoform a [Homo sapiens] Length = 810 Score = 28.9 bits (63), Expect = 4.6 Identities = 40/162 (24%), Positives = 65/162 (40%), Gaps = 27/162 (16%) Query: 9 GAIAKKKLA---------EAKYKERGTVLAED-----QLAQMSKQLDMFKTNLEEFASKH 54 G I+ K+LA E Y T LA+ QL + D+FKT+ E+ A+ H Sbjct: 28 GQISTKELADFVRERATIEEAYSRSMTKLAKSASNYSQLGTFAPVWDVFKTSTEKLANCH 87 Query: 55 KQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHR 114 +RK E + Q G + + S K E+ G + VQ I+ + Sbjct: 88 LDLVRKLQELIKEVQ----KYGEEQVKSHKKTKEEVAGTLE-----AVQTIQSITQALQK 138 Query: 115 NGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGT 156 + + + Q+ LK G +++ + A+K KA T Sbjct: 139 SKENYNAKCVEQERLKKEGATQREIEK----AAVKSKKATDT 176 >gi|45439370 TAO kinase 1 [Homo sapiens] Length = 1001 Score = 28.5 bits (62), Expect = 6.1 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 8/59 (13%) Query: 22 KERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNP--------EFRVQFQDMC 72 K R ++ +++ QL+ K E KH E+R+ P + + QFQD C Sbjct: 672 KMRCELIRLQHQTELTNQLEYNKRRERELRRKHVMEVRQQPKSLKSKELQIKKQFQDTC 730 >gi|150010552 FK506 binding protein 15, 133kDa [Homo sapiens] Length = 1219 Score = 28.5 bits (62), Expect = 6.1 Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 25/138 (18%) Query: 13 KKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKN----------- 61 +K+ E ER A+++ +Q +++D + + +E K +Q ++K Sbjct: 735 EKESLEKNLSERKKKSAQER-SQAEEEIDEIRKSYQEELDKLRQLLKKTRVSTDQAAAEQ 793 Query: 62 -----PEFRVQFQDMCATIGVDPLASGKGF----WSEMLGVGDFYYELGVQIIEVCLALK 112 E + Q++ C + LAS K + E+ D Y + VQ+ E CLAL+ Sbjct: 794 LSLVQAELQTQWEAKCEHL----LASAKDEHLQQYQEVCAQRDAYQQKLVQLQEKCLALQ 849 Query: 113 HRNGGLITLEELHQQVLK 130 + L E H + L+ Sbjct: 850 AQITALTKQNEQHIKELE 867 >gi|44890052 stathmin 1 isoform a [Homo sapiens] Length = 149 Score = 28.1 bits (61), Expect = 7.9 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 5/49 (10%) Query: 15 KLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNPE 63 K+AE K + E++ AQM+ +L+ + KH +E+RKN E Sbjct: 95 KMAEEKLTHKMEANKENREAQMAAKLERLREK-----DKHIEEVRKNKE 138 >gi|44890050 stathmin 1 isoform a [Homo sapiens] Length = 149 Score = 28.1 bits (61), Expect = 7.9 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 5/49 (10%) Query: 15 KLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNPE 63 K+AE K + E++ AQM+ +L+ + KH +E+RKN E Sbjct: 95 KMAEEKLTHKMEANKENREAQMAAKLERLREK-----DKHIEEVRKNKE 138 >gi|5031851 stathmin 1 isoform a [Homo sapiens] Length = 149 Score = 28.1 bits (61), Expect = 7.9 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 5/49 (10%) Query: 15 KLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNPE 63 K+AE K + E++ AQM+ +L+ + KH +E+RKN E Sbjct: 95 KMAEEKLTHKMEANKENREAQMAAKLERLREK-----DKHIEEVRKNKE 138 >gi|4758648 kinesin family member 5B [Homo sapiens] Length = 963 Score = 28.1 bits (61), Expect = 7.9 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 6/54 (11%) Query: 14 KKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQ 67 KK AE + G A+ Q ++ + NLE+ HKQ +R N + R + Sbjct: 812 KKSAEIDSDDTGGSAAQKQ------KISFLENNLEQLTKVHKQLVRDNADLRCE 859 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.135 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,185,737 Number of Sequences: 37866 Number of extensions: 384882 Number of successful extensions: 1204 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 17 Number of HSP's that attempted gapping in prelim test: 1193 Number of HSP's gapped (non-prelim): 27 length of query: 258 length of database: 18,247,518 effective HSP length: 100 effective length of query: 158 effective length of database: 14,460,918 effective search space: 2284825044 effective search space used: 2284825044 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.