Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 211059425
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|211059425 hypothetical protein LOC284422 [Homo sapiens]
(130 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|211059425 hypothetical protein LOC284422 [Homo sapiens] 256 3e-69
gi|34878777 ring finger protein 20 [Homo sapiens] 42 1e-04
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 40 5e-04
gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo ... 40 5e-04
gi|5031657 PDZK1 interacting protein 1 [Homo sapiens] 40 7e-04
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 39 9e-04
gi|151301171 RNA polymerase II transcription factor TAFII140 [Ho... 39 9e-04
gi|171460958 nucleolar protein 10 [Homo sapiens] 39 0.001
gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo... 39 0.001
gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo... 39 0.001
gi|42718020 retinitis pigmentosa 9 [Homo sapiens] 39 0.001
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 39 0.002
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 39 0.002
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 38 0.002
gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik... 38 0.002
gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo ... 38 0.002
gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo ... 38 0.002
gi|148746195 trichohyalin [Homo sapiens] 38 0.002
gi|221219020 NYD-SP11 protein [Homo sapiens] 38 0.003
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 38 0.003
gi|115511012 coiled-coil domain containing 136 [Homo sapiens] 38 0.003
gi|104526627 triadin [Homo sapiens] 37 0.003
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 37 0.004
gi|13236559 hypothetical protein LOC79169 [Homo sapiens] 37 0.004
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 37 0.006
gi|169210053 PREDICTED: hypothetical protein [Homo sapiens] 37 0.006
gi|56090620 NFKB activating protein-like [Homo sapiens] 37 0.006
gi|66792814 retrotransposon gag domain containing 4 [Homo sapiens] 37 0.006
gi|239745093 PREDICTED: hypothetical protein XP_002343359 [Homo ... 36 0.008
gi|7661952 squamous cell carcinoma antigen recognized by T cells... 36 0.008
>gi|211059425 hypothetical protein LOC284422 [Homo sapiens]
Length = 130
Score = 256 bits (655), Expect = 3e-69
Identities = 130/130 (100%), Positives = 130/130 (100%)
Query: 1 METLGALLVLEFLLLSPVEAQQATEHRLKPWLVGLAAVVGFLFIVYLVLLANRLWCSKAR 60
METLGALLVLEFLLLSPVEAQQATEHRLKPWLVGLAAVVGFLFIVYLVLLANRLWCSKAR
Sbjct: 1 METLGALLVLEFLLLSPVEAQQATEHRLKPWLVGLAAVVGFLFIVYLVLLANRLWCSKAR 60
Query: 61 AEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPG 120
AEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPG
Sbjct: 61 AEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPG 120
Query: 121 DHERAKSTVM 130
DHERAKSTVM
Sbjct: 121 DHERAKSTVM 130
>gi|34878777 ring finger protein 20 [Homo sapiens]
Length = 975
Score = 42.4 bits (98), Expect = 1e-04
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 50 LANRLWCSKARAEDEEET-TFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGES 108
L+++ SKA ED E + R E +++ E +RE++ +EKE++R++EK+ KE E
Sbjct: 543 LSSQSSASKASQEDANEIKSKRDEEERERERREKEREREREREKEKEREREKQKLKESEK 602
Query: 109 NLGLDLEEKEPGDHE 123
++KE G H+
Sbjct: 603 ERD-SAKDKEKGKHD 616
Score = 29.3 bits (64), Expect = 0.92
Identities = 14/73 (19%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 57 SKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKE-EKRKKEKKTAKEGESNLGLDLE 115
++ + + E+ ++ S Q+ + + + K++ +E+E E+R+KE++ +E E + E
Sbjct: 534 AELKPDSEDLSSQSSASKASQEDANEIKSKRDEEERERERREKEREREREREKEKERERE 593
Query: 116 EKEPGDHERAKST 128
+++ + E+ + +
Sbjct: 594 KQKLKESEKERDS 606
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 40.0 bits (92), Expect = 5e-04
Identities = 20/67 (29%), Positives = 38/67 (56%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
K E+E R + + + + +RE+KE +E++++RKK+++ KE + + + EK
Sbjct: 174 KEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKKERQKDRQTNWREK 233
Query: 118 EPGDHER 124
E G ER
Sbjct: 234 ERGKRER 240
Score = 34.7 bits (78), Expect = 0.022
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKE--GESNLGLDLE 115
K R + + + E + + + +R +KE KE EEK K++KK KE S G + E
Sbjct: 75 KERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERE 134
Query: 116 EKEPGDHERAK 126
KE E K
Sbjct: 135 RKEERKREERK 145
Score = 33.9 bits (76), Expect = 0.037
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
K R E E + E +++ E R KE KE+E K +++++ KE E + EK
Sbjct: 99 KRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERK--KEEREK 156
Query: 118 EPGDHERAK 126
E ER K
Sbjct: 157 ERERKERKK 165
Score = 33.5 bits (75), Expect = 0.049
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 13/78 (16%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKKEAKE-------------KEEKRKKEKKTAKEG 106
+ E+ E R E + + ++KR+KKE KE KEE++++E+K +
Sbjct: 91 KKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERK 150
Query: 107 ESNLGLDLEEKEPGDHER 124
+ + E KE ER
Sbjct: 151 KEEREKERERKERKKRER 168
Score = 33.5 bits (75), Expect = 0.049
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 58 KARAEDEEETTFRMESNLYQDQSE-DKREKKEAKEKEEKR-KKEKKTAKEGESNLGLDLE 115
+ R E +E + E +++ E KRE+K+ EKEE+R +KE+K K+ E N +
Sbjct: 139 RKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKK 198
Query: 116 EKEPGDHERAK 126
E+E + K
Sbjct: 199 ERERKERRERK 209
Score = 32.7 bits (73), Expect = 0.083
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 57 SKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEE 116
S+ + E E + E + + K+EKK ++KEE+ +K+++ KE + EE
Sbjct: 57 SERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEG-----EE 111
Query: 117 KE 118
KE
Sbjct: 112 KE 113
Score = 32.3 bits (72), Expect = 0.11
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
+ R E + R E +++ E +R KKE +EKE +RK+ KK ++ + +EK
Sbjct: 123 RGRTSKEGKERERKEERKREERKERER-KKEEREKERERKERKKRERKQVGEKEEERKEK 181
Query: 118 EPGDHER 124
E + ++
Sbjct: 182 ERKERKK 188
Score = 32.0 bits (71), Expect = 0.14
Identities = 16/61 (26%), Positives = 33/61 (54%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
K R E E+ R + + ++K+ +++ +E+E K+++ +K KEGE +EK
Sbjct: 61 KERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEK 120
Query: 118 E 118
+
Sbjct: 121 K 121
Score = 32.0 bits (71), Expect = 0.14
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Query: 57 SKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEE 116
SK E E + + E +++ +++REK+ +E++E++K+E+K E E E
Sbjct: 127 SKEGKERERKEERKREERKERERKKEEREKE--RERKERKKRERKQVGEKEE------ER 178
Query: 117 KEPGDHERAK 126
KE ER K
Sbjct: 179 KEKERKERKK 188
Score = 31.6 bits (70), Expect = 0.19
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 58 KARAEDEEETTFRMESNLYQ-DQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEE 116
K E E E R + Q + E++R++KE KE++++ + K+ KE E + ++
Sbjct: 151 KEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKK 210
Query: 117 KEPGDHERAK 126
+ ER K
Sbjct: 211 ERKKKEERKK 220
Score = 30.8 bits (68), Expect = 0.32
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 55 WCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDL 114
W S+ R + E T + + + E + E+K+ + + EKRK+E++ ++ E
Sbjct: 34 WQSEIREREREIETRK------EGKKERESERKKERREREKRKREREKERKRERGKKEKK 87
Query: 115 EEKEPGDHERAK 126
E++ + ER K
Sbjct: 88 GERKKEERERKK 99
Score = 30.4 bits (67), Expect = 0.41
Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 12/77 (15%)
Query: 62 EDEEETTFRMESNLYQDQSEDKREKKEAKEKE------------EKRKKEKKTAKEGESN 109
++E + R E +++ E +RE+KE K++E EK +KE+K +
Sbjct: 136 KEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKE 195
Query: 110 LGLDLEEKEPGDHERAK 126
+ E KE + ++ +
Sbjct: 196 RKKERERKERRERKKER 212
Score = 29.6 bits (65), Expect = 0.71
Identities = 17/67 (25%), Positives = 31/67 (46%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEP 119
R ++E E R ++ E ++ KK+ K++ + KE K + E + +E+E
Sbjct: 90 RKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERER 149
Query: 120 GDHERAK 126
ER K
Sbjct: 150 KKEEREK 156
Score = 26.6 bits (57), Expect = 6.0
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKE-------KEEKRKKEKKTAKEGESNL 110
K E EE+ + + + ++ + +++E KE KE +RKKE++ KE E
Sbjct: 104 KENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEER-EKERERKE 162
Query: 111 GLDLEEKEPGDHERAK 126
E K+ G+ E +
Sbjct: 163 RKKRERKQVGEKEEER 178
>gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo
sapiens]
Length = 956
Score = 40.0 bits (92), Expect = 5e-04
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEP 119
RA++E + E L + + +KREK E KEK EK++ +++ KE + L LEEK
Sbjct: 366 RAKEEAKKKKEEEKELKEKERREKREKDE-KEKAEKQRLKEERRKERQEALEAKLEEKRK 424
Query: 120 GDHER 124
+ E+
Sbjct: 425 KEEEK 429
Score = 38.1 bits (87), Expect = 0.002
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 63 DEEETTFRMESNLYQDQSED-KREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGD 121
D+E +++ +++ E K E K AKE+ +K+K+E+K KE E + +EKE +
Sbjct: 340 DQERLGKQLKLRAEREEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKEKAE 399
Query: 122 HERAK 126
+R K
Sbjct: 400 KQRLK 404
Score = 32.0 bits (71), Expect = 0.14
Identities = 16/57 (28%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEE 116
R +DE+E + L +++ ++++E EAK +E+++K+E+K +E E + + E
Sbjct: 390 REKDEKEKAEKQR--LKEERRKERQEALEAKLEEKRKKEEEKRLREEEKRIKAEKAE 444
Score = 26.9 bits (58), Expect = 4.6
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 67 TTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGDHER 124
+T + + L +DQ ++ K E+EEK K +++ + E EEKE + ER
Sbjct: 329 STEKNKLRLQRDQERLGKQLKLRAEREEKEKLKEEAKRAKEEAKKKKEEEKELKEKER 386
>gi|5031657 PDZK1 interacting protein 1 [Homo sapiens]
Length = 114
Score = 39.7 bits (91), Expect = 7e-04
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 6 ALLVLEFLLLSPVEAQQATEHRLKPWLVGLAAVVGFLFIVYLVLLANRLWCSK 58
+LL+L L P + Q L+PW+ GL AV FL +V + N WC +
Sbjct: 5 SLLILGLLTAVPPASCQQGLGNLQPWMQGLIAVAVFLVLVAIAFAVNHFWCQE 57
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 39.3 bits (90), Expect = 9e-04
Identities = 20/69 (28%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
K + +++++ T E +++ E KR++K K+KEE+ ++E++ +E E + EEK
Sbjct: 36 KRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEK----EEEEK 91
Query: 118 EPGDHERAK 126
E G + K
Sbjct: 92 EEGRRRKKK 100
Score = 37.7 bits (86), Expect = 0.003
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEP 119
R E +E E ++E ++EK+E ++K ++++K+KK +E E + EEKE
Sbjct: 29 RKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEE 88
Query: 120 GDHERAK 126
+ E +
Sbjct: 89 EEKEEGR 95
Score = 35.4 bits (80), Expect = 0.013
Identities = 17/61 (27%), Positives = 36/61 (59%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
K + + ++ET E+ +++ E + ++KE ++++ K K++KK KE E + EEK
Sbjct: 1 KKKKKKKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEK 60
Query: 118 E 118
+
Sbjct: 61 K 61
Score = 35.4 bits (80), Expect = 0.013
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 62 EDEEETTFRMESNLYQDQSEDKREK--------KEAKEKEEKRKKEKKTAKEGESNLGLD 113
E+EEE + + + + E +++K KE +E+E+KRK+++K KE E +
Sbjct: 20 EEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEE 79
Query: 114 LEEKEPGDHE 123
EE+E + E
Sbjct: 80 EEEEEEKEEE 89
Score = 33.9 bits (76), Expect = 0.037
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKR-EKKEAKEKEEKRKK-EKKTAKEGESNLGLDLE 115
K E+ EET E + + ++KR EK++ KEK++K K+ EK+ KE E
Sbjct: 7 KKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKR 66
Query: 116 EKEPGDHER 124
+K+ + ER
Sbjct: 67 KKKKEEEER 75
Score = 33.5 bits (75), Expect = 0.049
Identities = 16/63 (25%), Positives = 34/63 (53%)
Query: 62 EDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGD 121
E+EE+ R +++ ++ E++E +EKEE+ K+E + K+ + + EE++
Sbjct: 56 EEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKK 115
Query: 122 HER 124
R
Sbjct: 116 RRR 118
Score = 33.1 bits (74), Expect = 0.064
Identities = 18/66 (27%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 62 EDEEETTFRMESNLYQDQSEDKREK-KEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPG 120
E+EE+ R E + + ++K++K KE ++++EK ++EKK ++ + + E+E
Sbjct: 21 EEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEE 80
Query: 121 DHERAK 126
+ E K
Sbjct: 81 EEEEEK 86
Score = 32.3 bits (72), Expect = 0.11
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAK 104
R E+EEE E ++ K++KK +++EE+ KK+K+ K
Sbjct: 75 REEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRK 119
Score = 32.0 bits (71), Expect = 0.14
Identities = 16/72 (22%), Positives = 38/72 (52%)
Query: 57 SKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEE 116
++ R E EEE R + + E++ E++E +E+E++ +++++ + + EE
Sbjct: 49 TEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEE 108
Query: 117 KEPGDHERAKST 128
+E +R + T
Sbjct: 109 EEEKKKKRRRKT 120
Score = 32.0 bits (71), Expect = 0.14
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 62 EDEEETTFRMESNLYQDQSEDKREKKEAKEKEE--KRKKEKKTAKE 105
E+EEE + E + + K++K+ KE+EE K+K+ +KT K+
Sbjct: 78 EEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRKTKKK 123
Score = 30.8 bits (68), Expect = 0.32
Identities = 13/69 (18%), Positives = 40/69 (57%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
K + E+E++ + + +++ E++ E++E +++EE++++ ++ K+ + + EEK
Sbjct: 53 KEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEK 112
Query: 118 EPGDHERAK 126
+ + K
Sbjct: 113 KKKRRRKTK 121
Score = 30.0 bits (66), Expect = 0.54
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 83 KREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGDHERAKST 128
K++KKE +E EE + E++ KEG+ + KE ++ K T
Sbjct: 4 KKKKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKET 49
>gi|151301171 RNA polymerase II transcription factor TAFII140 [Homo
sapiens]
Length = 929
Score = 39.3 bits (90), Expect = 9e-04
Identities = 17/67 (25%), Positives = 39/67 (58%)
Query: 47 LVLLANRLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEG 106
L +L +L+ K + +++E+ + E +++ ++K+EK+ KEK E+ K+EK+ K
Sbjct: 682 LPVLPEKLFEEKEKVKEKEKKKDKKEKKKKKEKEKEKKEKEREKEKREREKREKEKEKHK 741
Query: 107 ESNLGLD 113
+ ++
Sbjct: 742 HEKIKVE 748
Score = 35.0 bits (79), Expect = 0.017
Identities = 15/49 (30%), Positives = 31/49 (63%)
Query: 78 DQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGDHERAK 126
++ E +EK++ K+K+EK+KK++K ++ E + E+E + E+ K
Sbjct: 691 EEKEKVKEKEKKKDKKEKKKKKEKEKEKKEKEREKEKREREKREKEKEK 739
Score = 33.1 bits (74), Expect = 0.064
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 79 QSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGDHERAKSTV 129
+ E K++KKE K+K+E ++KEKK + + + EKE H+ K V
Sbjct: 698 EKEKKKDKKEKKKKKE-KEKEKKEKEREKEKREREKREKEKEKHKHEKIKV 747
Score = 29.6 bits (65), Expect = 0.71
Identities = 16/63 (25%), Positives = 29/63 (46%)
Query: 57 SKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEE 116
+K + E + + E + E +R+++ K+K + + KEK KE E + E
Sbjct: 513 TKLPSSVEVKKKLKKELKTKMKKKEKQRDREREKDKNKDKSKEKDKVKEKEKDKETGRET 572
Query: 117 KEP 119
K P
Sbjct: 573 KYP 575
Score = 26.9 bits (58), Expect = 4.6
Identities = 12/50 (24%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKE--KEEKRKKEKKTAKE 105
K + ++ + +++ L + + E ++KK+ +E K++K K+EK+ K+
Sbjct: 591 KIKEFEDVDPKVKLKDGLVRKEKEKHKDKKKDREKGKKDKDKREKEKVKD 640
>gi|171460958 nucleolar protein 10 [Homo sapiens]
Length = 688
Score = 38.9 bits (89), Expect = 0.001
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 63 DEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGDH 122
DEE FR+ + L SE +++K E++E R+KE++ EG+ + D E E D
Sbjct: 497 DEESEEFRLLNPLVSKISEKRKKKLRLLEQQELREKEEEEEPEGKPS---DAESSESSDD 553
Query: 123 ERA 125
E+A
Sbjct: 554 EKA 556
>gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo
sapiens]
Length = 1272
Score = 38.9 bits (89), Expect = 0.001
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 53 RLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAK-EGESNLG 111
RL K + ED+E E +++S+ K E+++ K +EE+RKK+++ AK + E
Sbjct: 59 RLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEAA 118
Query: 112 LDLEEKE 118
++EKE
Sbjct: 119 AQMKEKE 125
Score = 33.5 bits (75), Expect = 0.049
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Query: 57 SKARAEDEEETTFRME--------SNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGES 108
SK R +D+ + T + E +D K +K+ K+ EEK K E+++ K+ E
Sbjct: 33 SKERPKDDIKLTAKKEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEE 92
Query: 109 NLGLDLEEKEPGDHERAK 126
EE+ E+AK
Sbjct: 93 EKKKHQEEERKKQEEQAK 110
Score = 30.8 bits (68), Expect = 0.32
Identities = 16/72 (22%), Positives = 33/72 (45%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
K R ED++ E ++ E+ + KE+EEK+K +++ K+ E EE+
Sbjct: 57 KKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEEE 116
Query: 118 EPGDHERAKSTV 129
+ + ++
Sbjct: 117 AAAQMKEKEESI 128
Score = 27.3 bits (59), Expect = 3.5
Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
K +AE+E + E +Q++ E K+++++AK ++E+ + KE L + E+
Sbjct: 79 KVKAEEESKKKEEEEKKKHQEE-ERKKQEEQAKRQQEEEAAAQMKEKEESIQLHQEAWER 137
Score = 26.2 bits (56), Expect = 7.8
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 75 LYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGES--NLGLDLEEKEPGD 121
L++D +E + KE+ + + K KE K KE S +L L+LE E D
Sbjct: 482 LFKD-NEKSCQNKESNKDDTKEAKESKENKEVSSPDDLELELENLEIND 529
>gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo
sapiens]
Length = 1272
Score = 38.9 bits (89), Expect = 0.001
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 53 RLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAK-EGESNLG 111
RL K + ED+E E +++S+ K E+++ K +EE+RKK+++ AK + E
Sbjct: 59 RLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEAA 118
Query: 112 LDLEEKE 118
++EKE
Sbjct: 119 AQMKEKE 125
Score = 33.5 bits (75), Expect = 0.049
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Query: 57 SKARAEDEEETTFRME--------SNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGES 108
SK R +D+ + T + E +D K +K+ K+ EEK K E+++ K+ E
Sbjct: 33 SKERPKDDIKLTAKKEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEE 92
Query: 109 NLGLDLEEKEPGDHERAK 126
EE+ E+AK
Sbjct: 93 EKKKHQEEERKKQEEQAK 110
Score = 30.8 bits (68), Expect = 0.32
Identities = 16/72 (22%), Positives = 33/72 (45%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
K R ED++ E ++ E+ + KE+EEK+K +++ K+ E EE+
Sbjct: 57 KKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEEE 116
Query: 118 EPGDHERAKSTV 129
+ + ++
Sbjct: 117 AAAQMKEKEESI 128
Score = 27.3 bits (59), Expect = 3.5
Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
K +AE+E + E +Q++ E K+++++AK ++E+ + KE L + E+
Sbjct: 79 KVKAEEESKKKEEEEKKKHQEE-ERKKQEEQAKRQQEEEAAAQMKEKEESIQLHQEAWER 137
Score = 26.2 bits (56), Expect = 7.8
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 75 LYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGES--NLGLDLEEKEPGD 121
L++D +E + KE+ + + K KE K KE S +L L+LE E D
Sbjct: 482 LFKD-NEKSCQNKESNKDDTKEAKESKENKEVSSPDDLELELENLEIND 529
>gi|42718020 retinitis pigmentosa 9 [Homo sapiens]
Length = 221
Score = 38.9 bits (89), Expect = 0.001
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 64 EEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKE-----GESNLGLDLE 115
E+ T+ S+ + ++K +KK+ KEK +KRKKEKK K+ +SN G D E
Sbjct: 165 EDSTSDEDRSSSSSSEGKEKHKKKKKKEKHKKRKKEKKKKKKRKHKSSKSNEGSDSE 221
Score = 30.0 bits (66), Expect = 0.54
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 80 SEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGDHE 123
S + +EK + K+K+EK KK KK K+ + + E D E
Sbjct: 178 SSEGKEKHKKKKKKEKHKKRKKEKKKKKKRKHKSSKSNEGSDSE 221
Score = 29.3 bits (64), Expect = 0.92
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 64 EEETTFRMESNLYQDQSEDK-REKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGDH 122
E++ + L +D + D+ R + E +EK KK+KK KE + ++K+ H
Sbjct: 152 EKDVRIQQLKQLLEDSTSDEDRSSSSSSEGKEKHKKKKK--KEKHKKRKKEKKKKKKRKH 209
Query: 123 ERAKS 127
+ +KS
Sbjct: 210 KSSKS 214
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 38.5 bits (88), Expect = 0.002
Identities = 19/83 (22%), Positives = 45/83 (54%), Gaps = 10/83 (12%)
Query: 53 RLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKE---------AKEKEEKRKKEKKTA 103
++W + + +++EE + E +++ + EDK +++E +E+EEK ++++
Sbjct: 596 KMWEQEEKMQEQEEKMWEQEEKMWEQEEEDKMQEQEEMMWEQEEKMQEQEEKMWEQEEKM 655
Query: 104 KEGESNLGLDLEEKEPGDHERAK 126
+E E + + EEK G E+ +
Sbjct: 656 REQEEKM-REQEEKMQGQEEKMR 677
Score = 38.5 bits (88), Expect = 0.002
Identities = 17/71 (23%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 54 LWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLD 113
+W + + +++EE + E + ++Q E RE++E + +E++ +E++ +G+ +
Sbjct: 634 MWEQEEKMQEQEEKMWEQEEKM-REQEEKMREQEEKMQGQEEKMREQEEKMQGQEEKMRE 692
Query: 114 LEEKEPGDHER 124
EEK G E+
Sbjct: 693 QEEKMRGQEEK 703
Score = 35.8 bits (81), Expect = 0.010
Identities = 19/72 (26%), Positives = 41/72 (56%), Gaps = 8/72 (11%)
Query: 52 NRLWCSKARAEDEEETTFRMESNLYQ------DQSEDKREKKEAKEKEEKRKKEKKTAKE 105
+++W + + D+E+ + E +++ ++ E RE+K+ ++EEK ++EKKT ++
Sbjct: 486 DQMWEQEEKMRDQEQKMWDQEERMWEQDERLREKEERMREQKKMWQQEEKMREEKKTQEQ 545
Query: 106 GESNLGLDLEEK 117
+ D EEK
Sbjct: 546 EKKT--WDQEEK 555
Score = 34.7 bits (78), Expect = 0.022
Identities = 16/67 (23%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEP 119
+ +++EE + E + Q+Q E E++E ++E++ +E++ +G+ + EEK
Sbjct: 626 KMQEQEEMMWEQEEKM-QEQEEKMWEQEEKMREQEEKMREQEEKMQGQEEKMREQEEKMQ 684
Query: 120 GDHERAK 126
G E+ +
Sbjct: 685 GQEEKMR 691
Score = 34.7 bits (78), Expect = 0.022
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 53 RLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGL 112
++W + + ++EE E + Q Q E RE++E + +E++ +E++ G+
Sbjct: 647 KMWEQEEKMREQEEKMREQEEKM-QGQEEKMREQEEKMQGQEEKMREQEEKMRGQEEKMW 705
Query: 113 DLEEKEPGDHER 124
EEK G E+
Sbjct: 706 GQEEKMWGQEEK 717
Score = 34.3 bits (77), Expect = 0.029
Identities = 16/77 (20%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 50 LANRLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESN 109
L +W + ++E+ + E +++ + + ++ + +E+EEK ++++K +E E
Sbjct: 232 LQEEMWRQEEELREQEKKIRKQEEKMWRQEERLREQEGKMREQEEKMRRQEKRLREQEK- 290
Query: 110 LGLDLEEKEPGDHERAK 126
+L E+E E+ K
Sbjct: 291 ---ELREQEKELREQKK 304
Score = 33.9 bits (76), Expect = 0.037
Identities = 10/58 (17%), Positives = 35/58 (60%)
Query: 53 RLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNL 110
++W + + ++EE +R E L++ + + + ++++ +++EE+ ++ + +E E +
Sbjct: 318 KMWEQEEKMREQEEKMWRQEERLWEQEKQMREQEQKMRDQEERMWEQDERLREKEERM 375
Score = 33.9 bits (76), Expect = 0.037
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 53 RLWCSKARAED------EEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEG 106
R+W R + E+E + E + +++ +REKK +E+E R++E+K K+
Sbjct: 360 RMWEQDERLREKEERMREQEKMWEQEEKMQEEERIREREKKMREEEETMREQEEKMQKQE 419
Query: 107 ESNLGLDLEEKE 118
E+ + EEKE
Sbjct: 420 ENM--WEQEEKE 429
Score = 33.5 bits (75), Expect = 0.049
Identities = 18/72 (25%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 53 RLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGL 112
++W + + +E++T + + DQ E RE++ +E+E+K ++E++ +E E +
Sbjct: 528 KMWQQEEKMREEKKT--QEQEKKTWDQEEKMREEERMREREKKMREEEEMMREQEEKM-Q 584
Query: 113 DLEEKEPGDHER 124
+ EEK E+
Sbjct: 585 EQEEKMREQEEK 596
Score = 33.1 bits (74), Expect = 0.064
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 12/85 (14%)
Query: 53 RLWCSKARAEDEEETTFRMESNLYQDQSEDKREKK-----------EAKEKEEKRKKEKK 101
R+W R ++EE R + ++Q + + + EKK E K +EE+R +E++
Sbjct: 508 RMWEQDERLREKEER-MREQKKMWQQEEKMREEKKTQEQEKKTWDQEEKMREEERMRERE 566
Query: 102 TAKEGESNLGLDLEEKEPGDHERAK 126
E + + EEK E+ +
Sbjct: 567 KKMREEEEMMREQEEKMQEQEEKMR 591
Score = 31.6 bits (70), Expect = 0.19
Identities = 14/55 (25%), Positives = 33/55 (60%)
Query: 53 RLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGE 107
RL + + ++EE R E L + + E + ++KE +E+++ R++E++ ++ E
Sbjct: 263 RLREQEGKMREQEEKMRRQEKRLREQEKELREQEKELREQKKLREQEEQMQEQEE 317
Score = 31.2 bits (69), Expect = 0.24
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 64 EEETTFRMESNLYQDQSEDKREKKEAK-EKEEKRKKEKKTAKEGESNLGLDLEEKEPGDH 122
EEE R + Q+Q E RE++E E+EEK +++++ E E + EE + +
Sbjct: 571 EEEEMMREQEEKMQEQEEKMREQEEKMWEQEEKMQEQEEKMWEQEEKMWEQEEEDKMQEQ 630
Query: 123 E 123
E
Sbjct: 631 E 631
Score = 30.8 bits (68), Expect = 0.32
Identities = 11/55 (20%), Positives = 31/55 (56%)
Query: 53 RLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGE 107
++W + R ++E E + + + + ++KE +E+E++ +++KK ++ E
Sbjct: 256 KMWRQEERLREQEGKMREQEEKMRRQEKRLREQEKELREQEKELREQKKLREQEE 310
Score = 29.6 bits (65), Expect = 0.71
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 53 RLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGE 107
RLW + + ++E+ E +++ Q E REK+E ++EK ++++ +E E
Sbjct: 339 RLWEQEKQMREQEQKMRDQEERMWE-QDERLREKEERMREQEKMWEQEEKMQEEE 392
Score = 27.3 bits (59), Expect = 3.5
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 64 EEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGDHE 123
E+E R + DQ E E+ E ++E+R +E+K + E + EEK+ + E
Sbjct: 490 EQEEKMRDQEQKMWDQEERMWEQDERLREKEERMREQKKMWQQEEKM---REEKKTQEQE 546
Query: 124 R 124
+
Sbjct: 547 K 547
Score = 26.9 bits (58), Expect = 4.6
Identities = 18/76 (23%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 53 RLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGL 112
++W + + D+EE + E +++ + ++E + +++E+ R +E+K + E
Sbjct: 454 KIWEQEEKIRDQEE-MWGQEKKMWRQEKMREQEDQMWEQEEKMRDQEQKMWDQEERMWEQ 512
Query: 113 D--LEEKEPGDHERAK 126
D L EKE E+ K
Sbjct: 513 DERLREKEERMREQKK 528
Score = 26.2 bits (56), Expect = 7.8
Identities = 9/43 (20%), Positives = 28/43 (65%)
Query: 63 DEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKE 105
++EE + E N+++ + ++ ++++ ++KE+ ++EK +E
Sbjct: 410 EQEEKMQKQEENMWEQEEKEWQQQRLPEQKEKLWEQEKMQEQE 452
Score = 26.2 bits (56), Expect = 7.8
Identities = 14/65 (21%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 53 RLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGL 112
+ W + + +EE R E + +++ + ++++ +E+EEK +++++ E E +
Sbjct: 548 KTWDQEEKMREEERMRER-EKKMREEEEMMREQEEKMQEQEEKMREQEEKMWEQEEKM-Q 605
Query: 113 DLEEK 117
+ EEK
Sbjct: 606 EQEEK 610
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 38.5 bits (88), Expect = 0.002
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 62 EDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGD 121
E E E E L ++Q E +REK+ K++E +++KEK+ KE E ++ E K+ +
Sbjct: 506 EREREKEREREKELEKEQ-EQEREKEREKDRERQQEKEKELEKEQEKQREMEKERKQEKE 564
Query: 122 HE 123
E
Sbjct: 565 KE 566
Score = 33.1 bits (74), Expect = 0.064
Identities = 15/48 (31%), Positives = 30/48 (62%)
Query: 79 QSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGDHERAK 126
+ E +REK+ KE+E++R+KE++ +E + +LE+++ E K
Sbjct: 510 EKEREREKELEKEQEQEREKEREKDRERQQEKEKELEKEQEKQREMEK 557
Score = 31.6 bits (70), Expect = 0.19
Identities = 14/61 (22%), Positives = 36/61 (59%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
+ R +++E+ + + + + E K+EK++ E++++++KE + KE E L+ E +
Sbjct: 535 RERQQEKEKELEKEQEKQREMEKERKQEKEKELERQKEKEKELQKMKEQEKECELEKERE 594
Query: 118 E 118
+
Sbjct: 595 K 595
Score = 30.8 bits (68), Expect = 0.32
Identities = 13/46 (28%), Positives = 30/46 (65%)
Query: 79 QSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGDHER 124
+ E + EK++ +E+E++R+K+++ +E E L + E++ + ER
Sbjct: 514 EREKELEKEQEQEREKEREKDRERQQEKEKELEKEQEKQREMEKER 559
Score = 30.4 bits (67), Expect = 0.41
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 77 QDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGDHERAK 126
Q E+ RE++ KE+E +++ EK+ +E E D E ++ + E K
Sbjct: 498 QPSPEEIREREREKEREREKELEKEQEQEREKEREKDRERQQEKEKELEK 547
Score = 30.0 bits (66), Expect = 0.54
Identities = 14/67 (20%), Positives = 38/67 (56%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEP 119
R ++ E+ R + + + E +++++ KE++++++KE + KE E L E+++
Sbjct: 527 REKEREKDRERQQEKEKELEKEQEKQREMEKERKQEKEKELERQKEKEKELQKMKEQEKE 586
Query: 120 GDHERAK 126
+ E+ +
Sbjct: 587 CELEKER 593
Score = 29.6 bits (65), Expect = 0.71
Identities = 15/50 (30%), Positives = 30/50 (60%)
Query: 81 EDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGDHERAKSTVM 130
E +REK+ +EKE ++++E++ KE E + E+++ + E+ K M
Sbjct: 506 EREREKEREREKELEKEQEQEREKEREKDRERQQEKEKELEKEQEKQREM 555
Score = 29.6 bits (65), Expect = 0.71
Identities = 18/70 (25%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 62 EDEEETTFRMESNLYQDQSEDK---REKKEAKEK--EEKRKKEKKTAKEGESNLGLDLEE 116
E E E +E Q++ +++ RE+++ KEK E++++K+++ KE + +LE
Sbjct: 510 EKEREREKELEKEQEQEREKEREKDRERQQEKEKELEKEQEKQREMEKERKQEKEKELER 569
Query: 117 KEPGDHERAK 126
++ + E K
Sbjct: 570 QKEKEKELQK 579
Score = 28.1 bits (61), Expect = 2.1
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 62 EDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGE---SNLGLDLEEKE 118
E E+E ME Q++ ++ +KE KEKE ++ KE++ E E L +E +E
Sbjct: 546 EKEQEKQREMEKERKQEKEKELERQKE-KEKELQKMKEQEKECELEKEREKLEEKIEPRE 604
Query: 119 P 119
P
Sbjct: 605 P 605
Score = 27.7 bits (60), Expect = 2.7
Identities = 12/46 (26%), Positives = 29/46 (63%)
Query: 79 QSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGDHER 124
+ E +RE+++ EKE+++++EK+ K+ E + E ++ + +R
Sbjct: 508 EREKEREREKELEKEQEQEREKEREKDRERQQEKEKELEKEQEKQR 553
Score = 27.3 bits (59), Expect = 3.5
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 70 RMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGDHERAK 126
R++ L + + E+ +E+E++R++EK+ KE E + E+ E+ K
Sbjct: 487 RLDEKLGILEKQPSPEEIREREREKEREREKELEKEQEQEREKEREKDRERQQEKEK 543
Score = 26.6 bits (57), Expect = 6.0
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 57 SKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLD--- 113
SK + DE+E ++ + S ++ +E+EE+R +E++ A E LD
Sbjct: 434 SKQQVADEDE-IWKQRRRQQSEISAAVERARKRREEEERRMEEQRKAACAEKLKRLDEKL 492
Query: 114 -LEEKEPGDHE 123
+ EK+P E
Sbjct: 493 GILEKQPSPEE 503
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 38.1 bits (87), Expect = 0.002
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
K R E E+E R E +++ ++RE++ +E+E +R+KEK+ +E E + D ++
Sbjct: 300 KERQEIEKE---RRERERERERERERREREREREREREREKEKERERERERDRDRDRTKE 356
Query: 118 EPGDHERAK 126
D +R +
Sbjct: 357 RDRDRDRER 365
Score = 37.0 bits (84), Expect = 0.004
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 57 SKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEE 116
+K R+ E++ R + + E +RE++ +E+E +R++E++ +E E + D EE
Sbjct: 378 NKDRSRSREKSRDRERER--EREREREREREREREREREREREREREREREKDKKRDREE 435
Query: 117 KEPGDHERAK 126
E +ER K
Sbjct: 436 DEEDAYERRK 445
Score = 35.0 bits (79), Expect = 0.017
Identities = 19/68 (27%), Positives = 34/68 (50%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
K R E E E E + + E +RE+++ KE+E +R++++ + E + D E
Sbjct: 307 KERRERERERERERERREREREREREREREKEKERERERERDRDRDRTKERDRDRDRERD 366
Query: 118 EPGDHERA 125
D ER+
Sbjct: 367 RDRDRERS 374
Score = 30.8 bits (68), Expect = 0.32
Identities = 15/65 (23%), Positives = 32/65 (49%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEP 119
R D E ++ R + + RE++ +E+E +R++E++ +E E + E +
Sbjct: 367 RDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERERERERERERE 426
Query: 120 GDHER 124
D +R
Sbjct: 427 KDKKR 431
Score = 30.4 bits (67), Expect = 0.41
Identities = 15/67 (22%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEP 119
+ E+E+ + + +++ E +RE++ +E+ E R++E++ +E E + E +
Sbjct: 290 KLEEEKGKKEKERQEIEKERRERERERERERERRE-REREREREREREKEKERERERERD 348
Query: 120 GDHERAK 126
D +R K
Sbjct: 349 RDRDRTK 355
Score = 28.9 bits (63), Expect = 1.2
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 64 EEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGE 107
E+E R + + Q+ E + E++E +EKEEKR++ + +E E
Sbjct: 566 EQEAERRRQPQIKQEP-ESEEEEEEKQEKEEKREEPMEEEEEPE 608
Score = 27.7 bits (60), Expect = 2.7
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 62 EDEEETTFRMESNLYQDQSEDKREKKEAKEKE------EKRKKEKKTAKEGESNLGLDLE 115
E+++ E + ++D + E+K KEKE E+R++E++ +E E + E
Sbjct: 270 EEDKRDLISREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERR---ERE 326
Query: 116 EKEPGDHERAK 126
+ + ER K
Sbjct: 327 REREREREREK 337
Score = 27.3 bits (59), Expect = 3.5
Identities = 15/69 (21%), Positives = 28/69 (40%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
+ R D + T R + + RE+ + K+ R +EK +E E + E +
Sbjct: 345 RERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERE 404
Query: 118 EPGDHERAK 126
+ ER +
Sbjct: 405 RERERERER 413
>gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like
protein 6 [Homo sapiens]
Length = 724
Score = 38.1 bits (87), Expect = 0.002
Identities = 15/65 (23%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 53 RLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGL 112
++W + + D+EE E +++ + + + ++++ +E+EEK +++++ +E E +G
Sbjct: 558 KMWRQEEKMHDQEEKIREQEEKVWRQEEKIREQEEKIREQEEKIREQEEMTQEQEEKMG- 616
Query: 113 DLEEK 117
+ EEK
Sbjct: 617 EQEEK 621
Score = 33.1 bits (74), Expect = 0.064
Identities = 19/67 (28%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEP 119
+ ++EE R E +++ + + +R+++ EKEEK +++++ E E + +LEEK
Sbjct: 390 KIREQEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKI-RELEEKM- 447
Query: 120 GDHERAK 126
HE+ K
Sbjct: 448 --HEQEK 452
Score = 32.0 bits (71), Expect = 0.14
Identities = 14/64 (21%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 54 LWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLD 113
+W K + ++EE + E +++ + + ++++ +E+EEK ++++ +E E + +
Sbjct: 538 IWRQKEKIHEQEEKIRKQEEKMWRQEEKMHDQEEKIREQEEKVWRQEEKIREQEEKI-RE 596
Query: 114 LEEK 117
EEK
Sbjct: 597 QEEK 600
Score = 30.0 bits (66), Expect = 0.54
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 7/64 (10%)
Query: 58 KARAED---EEETTFRMESNLYQDQSEDKREKKEAKEKEEK-RKKEKKTAKEGESNLGLD 113
K R E+ E+E +R E + ++Q E R+K++ E+EEK RK+E+K ++ E D
Sbjct: 512 KIREEEKRQEQEEMWRQEEKI-REQEEIWRQKEKIHEQEEKIRKQEEKMWRQEEKM--HD 568
Query: 114 LEEK 117
EEK
Sbjct: 569 QEEK 572
Score = 30.0 bits (66), Expect = 0.54
Identities = 13/67 (19%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEP 119
+ ++EE +R E + + + + + ++++ +E+EE +++++ E E + + EEK
Sbjct: 572 KIREQEEKVWRQEEKIREQEEKIREQEEKIREQEEMTQEQEEKMGEQEEKM-CEQEEKMQ 630
Query: 120 GDHERAK 126
E+ +
Sbjct: 631 EQEEKMR 637
Score = 29.3 bits (64), Expect = 0.92
Identities = 15/57 (26%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 52 NRLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEK-RKKEKKTAKEGE 107
N LW + +EE +R E + + + + + ++++ +E+EEK R++E+K ++ E
Sbjct: 349 NELW--NRLNQQQEEKMWRQEEKIQEWEEKIQEQEEKIREQEEKIREQEEKMRRQEE 403
Score = 28.9 bits (63), Expect = 1.2
Identities = 15/65 (23%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 53 RLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGL 112
++W + + ++ EE E + ++Q E RE++E ++E+ EK+ + +
Sbjct: 362 KMWRQEEKIQEWEEKIQEQEEKI-REQEEKIREQEEKMRRQEEMMWEKEEKMRRQEEMMW 420
Query: 113 DLEEK 117
+ EEK
Sbjct: 421 EKEEK 425
Score = 28.9 bits (63), Expect = 1.2
Identities = 13/58 (22%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
+ ++EE T E + + + + ++++ +E+EEK +++++ +E E + + EEK
Sbjct: 600 KIREQEEMTQEQEEKMGEQEEKMCEQEEKMQEQEEKMRRQEEKIREQEKKI-REQEEK 656
Score = 28.5 bits (62), Expect = 1.6
Identities = 13/60 (21%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 53 RLWCSKARAEDEEETTFRMESNLYQD-----QSEDKREKKEAKEKEEKRKKEKKTAKEGE 107
++W + + ++EE E +++ + E RE+++ +E+EE ++E+K ++ E
Sbjct: 478 KMWRQEEKIREQEEKIREQEEKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIREQEE 537
Score = 28.5 bits (62), Expect = 1.6
Identities = 13/55 (23%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 63 DEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
++EE E + + + + + ++K+ +E+EEK +++++ +E E + + EEK
Sbjct: 624 EQEEKMQEQEEKMRRQEEKIREQEKKIREQEEKIREQEEMMQEQEEKM-WEQEEK 677
Score = 28.1 bits (61), Expect = 2.1
Identities = 11/51 (21%), Positives = 29/51 (56%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNL 110
+ +++EE E + + + + +R+++ EKEEK +++++ E E +
Sbjct: 376 KIQEQEEKIREQEEKIREQEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKM 426
Score = 28.1 bits (61), Expect = 2.1
Identities = 10/58 (17%), Positives = 31/58 (53%)
Query: 53 RLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNL 110
++W + + ++EE E + + + + ++++ E+EEK ++++ +E E +
Sbjct: 579 KVWRQEEKIREQEEKIREQEEKIREQEEMTQEQEEKMGEQEEKMCEQEEKMQEQEEKM 636
Score = 28.1 bits (61), Expect = 2.1
Identities = 12/55 (21%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 63 DEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
++EE E + + + + +R++++ +E+E+K +++++ +E E + + EEK
Sbjct: 617 EQEEKMCEQEEKMQEQEEKMRRQEEKIREQEKKIREQEEKIREQEEMM-QEQEEK 670
Score = 27.7 bits (60), Expect = 2.7
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 56 CSKARAEDEEETTFRMESNLYQDQSEDKREKKE-AKEKEEKRKKEKKTAKEGESNLGLDL 114
C + E+E R + ++Q + RE++E +E+EE +++++ E E + +
Sbjct: 623 CEQEEKMQEQEEKMRRQEEKIREQEKKIREQEEKIREQEEMMQEQEEKMWEQEEKM-CEQ 681
Query: 115 EEKEPGDHERAK 126
EEK E+ +
Sbjct: 682 EEKMQEQEEKMR 693
Score = 27.7 bits (60), Expect = 2.7
Identities = 12/64 (18%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEP 119
+ ++EE E +++ + + ++++ +E+EEK +++++ K E + L +E++
Sbjct: 656 KIREQEEMMQEQEEKMWEQEEKMCEQEEKMQEQEEKMRRQEE--KMWEQEVRLRQQEEKM 713
Query: 120 GDHE 123
+H+
Sbjct: 714 QEHQ 717
Score = 27.3 bits (59), Expect = 3.5
Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 64 EEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGDHE 123
E+E R + + ++ E RE +E ++EK +++++ +E E + E+E +
Sbjct: 421 EKEEKMRRQEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEK-----IREQEKRQEQ 475
Query: 124 RAK 126
AK
Sbjct: 476 EAK 478
Score = 27.3 bits (59), Expect = 3.5
Identities = 9/49 (18%), Positives = 29/49 (59%)
Query: 62 EDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNL 110
+++EE E + + + + + ++++ + +EEK ++++K +E E +
Sbjct: 609 QEQEEKMGEQEEKMCEQEEKMQEQEEKMRRQEEKIREQEKKIREQEEKI 657
Score = 26.9 bits (58), Expect = 4.6
Identities = 15/69 (21%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 64 EEETTFRMESNLYQDQSED--KREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGD 121
E+E R + + Q+Q E ++E+K +++E+ +++E+K ++ E + + +E +
Sbjct: 596 EQEEKIREQEEMTQEQEEKMGEQEEKMCEQEEKMQEQEEKMRRQEEKIREQEKKIREQEE 655
Query: 122 HERAKSTVM 130
R + +M
Sbjct: 656 KIREQEEMM 664
Score = 26.6 bits (57), Expect = 6.0
Identities = 12/54 (22%), Positives = 30/54 (55%)
Query: 54 LWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGE 107
+W + + ++EE + E Q++ K+E+K +++E+ +E+K ++ E
Sbjct: 525 MWRQEEKIREQEEIWRQKEKIHEQEEKIRKQEEKMWRQEEKMHDQEEKIREQEE 578
>gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo
sapiens]
Length = 5033
Score = 38.1 bits (87), Expect = 0.002
Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 39 VGFLFIVYLVLLANRLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKE--KEEKR 96
V F F+ L L++ L ED ++ +E ++ ++ E++ E++E +E +EEK
Sbjct: 1834 VEFQFVPVLKLVSTLLVMGIFGDEDVKQILKMIEPEVFTEEEEEEDEEEEGEEEDEEEKE 1893
Query: 97 KKEKKTAKEGESNLGLDLEEKEPGDHER 124
+ E++TA+E E + EE+E + E+
Sbjct: 1894 EDEEETAQEKEDE---EKEEEEAAEGEK 1918
Score = 35.8 bits (81), Expect = 0.010
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 63 DEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLD 113
+EEE E +D+ E + +++E +++E +KE++ A EGE GL+
Sbjct: 1873 EEEEEEDEEEEGEEEDEEEKEEDEEETAQEKEDEEKEEEEAAEGEKEEGLE 1923
>gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo
sapiens]
Length = 5038
Score = 38.1 bits (87), Expect = 0.002
Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 39 VGFLFIVYLVLLANRLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKE--KEEKR 96
V F F+ L L++ L ED ++ +E ++ ++ E++ E++E +E +EEK
Sbjct: 1834 VEFQFVPVLKLVSTLLVMGIFGDEDVKQILKMIEPEVFTEEEEEEDEEEEGEEEDEEEKE 1893
Query: 97 KKEKKTAKEGESNLGLDLEEKEPGDHER 124
+ E++TA+E E + EE+E + E+
Sbjct: 1894 EDEEETAQEKEDE---EKEEEEAAEGEK 1918
Score = 35.8 bits (81), Expect = 0.010
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 63 DEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLD 113
+EEE E +D+ E + +++E +++E +KE++ A EGE GL+
Sbjct: 1873 EEEEEEDEEEEGEEEDEEEKEEDEEETAQEKEDEEKEEEEAAEGEKEEGLE 1923
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 38.1 bits (87), Expect = 0.002
Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKKEAK---EKEEKRKKEKKTAKEGESNLGLDLEE 116
R E+E +R E L Q++ + RE++E + E+E + +K+KK ++ E LG + E+
Sbjct: 921 RRRQEQERQYREEEQLQQEEEQLLREEREKRRRQERERQYRKDKKLQQKEEQLLGEEPEK 980
Query: 117 KEPGDHER 124
+ + E+
Sbjct: 981 RRRQEREK 988
Score = 35.4 bits (80), Expect = 0.013
Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 60 RAEDEEETTFRMESNLYQDQSE---DKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEE 116
R E E +R + L Q++ + ++REK+ +E+E + ++E++ +E E LG + E
Sbjct: 1011 RRRQEWERQYRKKDELQQEEEQLLREEREKRRLQERERQYREEEELQQEEEQLLGEERET 1070
Query: 117 KEPGDHER 124
+ + ER
Sbjct: 1071 RRRQELER 1078
Score = 34.3 bits (77), Expect = 0.029
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREK------KEAKEKEEKRKKEKKTAKEGESNLG 111
K E E R + L +DQ E++RE+ +E +E++E+R+++ + +E
Sbjct: 459 KREEETERHEQERRKQQLKRDQEEERRERWLKLEEEERREQQERREQQLRREQEERREQR 518
Query: 112 LDLEEKEPGDHERAKS 127
L +E+E +R +S
Sbjct: 519 LKRQEEEERLQQRLRS 534
Score = 33.1 bits (74), Expect = 0.064
Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 60 RAEDEEETTFRMESNLYQDQSE---DKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEE 116
R E E +R + L Q + + ++ EK+ +E+E+K ++E++ +E E L + E+
Sbjct: 951 RRRQERERQYRKDKKLQQKEEQLLGEEPEKRRRQEREKKYREEEELQQEEEQLLREEREK 1010
Query: 117 KEPGDHER 124
+ + ER
Sbjct: 1011 RRRQEWER 1018
Score = 32.7 bits (73), Expect = 0.083
Identities = 15/50 (30%), Positives = 30/50 (60%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGE 107
K E E+ R E ++Q E++RE++ +E+EE+R+++ + +E E
Sbjct: 309 KQEEERREQQEERREQQERREQQEERREQQLRREQEERREQQLRREQEEE 358
Score = 32.7 bits (73), Expect = 0.083
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 60 RAEDEEETTFRMESNLYQDQSE---DKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEE 116
R E E +R E L Q++ + ++RE + +E E + +KE++ +E E L + E+
Sbjct: 1041 RRLQERERQYREEEELQQEEEQLLGEERETRRRQELERQYRKEEELQQEEEQLLREEPEK 1100
Query: 117 KEPGDHER 124
+ + ER
Sbjct: 1101 RRRQERER 1108
Score = 32.7 bits (73), Expect = 0.083
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
Query: 60 RAEDE---EETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEE 116
RAE++ +E + R E L+Q++ + +R+++E K +EE ++++K + + +E
Sbjct: 1846 RAEEQFATQEKSRREEQELWQEEEQKRRQERERKLREEHIRRQQKEEQRHRQVGEIKSQE 1905
Query: 117 -------KEPGDHERAKSTV 129
EPG H+ A V
Sbjct: 1906 GKGHGRLLEPGTHQFASVPV 1925
Score = 32.3 bits (72), Expect = 0.11
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEP 119
++E++EE R + L ++Q E + ++ + +E+EE+ ++ K E E EE++
Sbjct: 635 KSEEQEE---RRQQQLRREQQERREQRLKREEEEERLEQRLKREHEEERREQELAEEEQE 691
Query: 120 GDHERAKSTV 129
ER KS +
Sbjct: 692 QARERIKSRI 701
Score = 31.6 bits (70), Expect = 0.19
Identities = 15/41 (36%), Positives = 28/41 (68%), Gaps = 4/41 (9%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEK 100
R E EE R E L ++Q E++RE++ +E+EE+R++++
Sbjct: 340 RREQEE----RREQQLRREQEEERREQQLRREQEEERREQQ 376
Score = 31.6 bits (70), Expect = 0.19
Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 70 RMESNLYQDQSED----KREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGDHER 124
R E L Q++ E+ +REK+ +E+E + ++E++ +E E L + E++ + ER
Sbjct: 900 RKEQQLLQEEEEELQREEREKRRRQEQERQYREEEQLQQEEEQLLREEREKRRRQERER 958
Score = 31.6 bits (70), Expect = 0.19
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEE---KRKKEKKTAKEGESNLGLDLEE 116
R E E +R E L Q++ + RE++E + ++E + +K+ + +E E L + E+
Sbjct: 981 RRRQEREKKYREEEELQQEEEQLLREEREKRRRQEWERQYRKKDELQQEEEQLLREEREK 1040
Query: 117 KEPGDHER 124
+ + ER
Sbjct: 1041 RRLQERER 1048
Score = 31.2 bits (69), Expect = 0.24
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKR---KKEKKTAKEGESNLGLDL 114
+ R E E +R E L Q++ + RE+ E + ++E+ ++E++ +E E L +
Sbjct: 1069 ETRRRQELERQYRKEEELQQEEEQLLREEPEKRRRQERERQCREEEELQQEEEQLLREER 1128
Query: 115 EEKEPGDHER 124
E++ + ER
Sbjct: 1129 EKRRRQELER 1138
Score = 31.2 bits (69), Expect = 0.24
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 53 RLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEA--KEKEEKRKKEKKTAKEGESNL 110
R W + R EEE R E + + +E+K+ +E+EEKR++++ K E
Sbjct: 1284 RRWQQRDRHFPEEEQLEREEQKEAKRRDRKSQEEKQLLREEREEKRRRQETDRKFREEEQ 1343
Query: 111 GLDLEEKEP 119
L E++P
Sbjct: 1344 LLQEREEQP 1352
Score = 30.8 bits (68), Expect = 0.32
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 66 ETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGDHERA 125
E R E L ++Q E++ E+K +E+ E+R K ++ +E L + EE E + ER
Sbjct: 416 EQQLRREQQLRREQEEERHEQKHEQERREQRLKREQ--EERRDWLKRE-EETERHEQERR 472
Query: 126 K 126
K
Sbjct: 473 K 473
Score = 30.8 bits (68), Expect = 0.32
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKR----KKEKKTAKEGESNLGLDLE 115
R E+EE R+ S + +++R ++ K +EEKR ++E++ +E E L+
Sbjct: 521 RQEEEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQERREQRLKREQEERRDQLLK 580
Query: 116 EKEPGDHERAK 126
+E +R K
Sbjct: 581 REEERRQQRLK 591
Score = 30.8 bits (68), Expect = 0.32
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKKEAKEKE--EKRKKEKKTAKEGESNLGLDLEEK 117
R E E +R E + Q++ + RE+ E + ++ E++ +E++ ++ E L + +EK
Sbjct: 1131 RRRQELERQYREEEEVQQEEEQLLREEPEKRRRQELERQYREEEELQQEEEQLLREEQEK 1190
Query: 118 EPGDHER 124
+ ER
Sbjct: 1191 RRQERER 1197
Score = 30.0 bits (66), Expect = 0.54
Identities = 13/53 (24%), Positives = 33/53 (62%), Gaps = 7/53 (13%)
Query: 62 EDEEETTFRMESNLYQ-------DQSEDKREKKEAKEKEEKRKKEKKTAKEGE 107
E++++ R E L + +Q E++RE++E +E++E+R++++ ++ E
Sbjct: 293 EEQQQQRLRREQQLRRKQEEERREQQEERREQQERREQQEERREQQLRREQEE 345
Score = 30.0 bits (66), Expect = 0.54
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKK--EAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
R E EE R E L +++ E++R ++ +++E+EE+R+++ + ++ L EE+
Sbjct: 609 RLEQEE----RREQRLKREEPEEERRQQLLKSEEQEERRQQQLRREQQERREQRLKREEE 664
Query: 118 EPGDHERAK 126
E +R K
Sbjct: 665 EERLEQRLK 673
Score = 29.6 bits (65), Expect = 0.71
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 60 RAEDEEET------TFRMESNLYQDQSED----KREKKEAKEKEEKRKKE-KKTAKEGES 108
R E EEE R E L ++Q E KRE++ + ++E+RK++ K+ +E
Sbjct: 426 RREQEEERHEQKHEQERREQRLKREQEERRDWLKREEETERHEQERRKQQLKRDQEEERR 485
Query: 109 NLGLDLEEKEPGDHERAK 126
L LEE+E + + +
Sbjct: 486 ERWLKLEEEERREQQERR 503
Score = 29.3 bits (64), Expect = 0.92
Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKE 118
R E +EE R E L ++Q E++RE++ +E+EE+R++++ ++ E L ++
Sbjct: 327 RREQQEE---RREQQLRREQ-EERREQQLRREQEEERREQQLRREQEEERREQQLRREQ 381
Score = 28.9 bits (63), Expect = 1.2
Identities = 15/58 (25%), Positives = 32/58 (55%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
R E EEE ++ + Q++ ++ ++E +E+ E+R K ++ + E L + EE+
Sbjct: 622 REEPEEERRQQLLKSEEQEERRQQQLRREQQERREQRLKREEEEERLEQRLKREHEEE 679
Score = 28.5 bits (62), Expect = 1.6
Identities = 12/64 (18%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 62 EDEEETTFRME-SNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPG 120
++EEE ++E L +++ E++++++ + +++ R+K+++ +E + E +E
Sbjct: 272 QEEEEQLRKLERQELRRERQEEEQQQQRLRREQQLRRKQEEERREQQEERREQQERREQQ 331
Query: 121 DHER 124
+ R
Sbjct: 332 EERR 335
Score = 28.1 bits (61), Expect = 2.1
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
K R E +++ R QD+ + E+KE +++E +KE++ +E E +L+E+
Sbjct: 221 KGREEKQQQRRER------QDRVFQEEEEKEWRKRETVLRKEEEKLQEEEPQRQRELQEE 274
Query: 118 E 118
E
Sbjct: 275 E 275
Score = 28.1 bits (61), Expect = 2.1
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 62 EDEEETTFRMESNLYQDQSEDKREKKEAKEKEEK-----RKKEKKTAKEGESNLGLDLEE 116
E+EE E Q+Q RE+++ +++EE+ R+K ++ +E + L++
Sbjct: 909 EEEELQREEREKRRRQEQERQYREEEQLQQEEEQLLREEREKRRRQERERQYRKDKKLQQ 968
Query: 117 KE 118
KE
Sbjct: 969 KE 970
Score = 28.1 bits (61), Expect = 2.1
Identities = 11/44 (25%), Positives = 26/44 (59%)
Query: 62 EDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKE 105
E E + + + +++ ++ E+KEAK ++ K ++EK+ +E
Sbjct: 1280 EQERRRWQQRDRHFPEEEQLEREEQKEAKRRDRKSQEEKQLLRE 1323
Score = 27.7 bits (60), Expect = 2.7
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 59 ARAEDEEETTFRMESNLYQDQSEDK-REKKEAKEKEEKRKKEKK 101
A E++ E R+E Q + E+ R+++E +E+EE+R +E++
Sbjct: 149 AEGEEQSEKQERLEQRDRQRRDEELWRQRQEWQEREERRAEEEQ 192
Score = 27.7 bits (60), Expect = 2.7
Identities = 13/48 (27%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKE 105
K E+ E R E L ++Q E++RE++ +++EE+R +++ +++
Sbjct: 490 KLEEEERREQQERREQQLRREQ-EERREQRLKRQEEEERLQQRLRSEQ 536
Score = 27.7 bits (60), Expect = 2.7
Identities = 15/63 (23%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 64 EEETTFRMESNLYQDQSEDKREKKEAKEKEEKR-KKEKKTAKEGESNLGLDLEEKEPGDH 122
EEE + E L +++ E +R+++E + +EE+ +++K+ + + + DL+ + +
Sbjct: 1172 EEEELQQEEEQLLREEQEKRRQERERQYREEEELQRQKRKQRYRDEDQRSDLKWQWEPEK 1231
Query: 123 ERA 125
E A
Sbjct: 1232 ENA 1234
Score = 26.6 bits (57), Expect = 6.0
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 41 FLFIVYLVLLANRLWCSKARAEDEEETT-FRMESNLYQD--QSEDKRE----KKEAKEKE 93
FL ++ V A +A DEE+ + +L QD Q ED+R ++ +E+
Sbjct: 74 FLLFIFKVAQACYYALGQATGLDEEKRARCDGKESLLQDRRQEEDQRRFEPRDRQLEEEP 133
Query: 94 EKRKKEKKTAKEGESNLGLDLEEKE 118
+R+++K+ +E E G + EK+
Sbjct: 134 GQRRRQKRQEQERELAEGEEQSEKQ 158
Score = 26.6 bits (57), Expect = 6.0
Identities = 13/43 (30%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKKEA-KEKEEKRKKEKK 101
R E + +R E + Q + +RE++E +E+E+KR++E++
Sbjct: 1836 RLRQERDRQYRAEEQ-FATQEKSRREEQELWQEEEQKRRQERE 1877
Score = 26.2 bits (56), Expect = 7.8
Identities = 13/57 (22%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 62 EDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKE 118
++EEE +R + + + E+K +++E + + E +++E++ K L + +E+E
Sbjct: 239 QEEEEKEWRKRETVLRKE-EEKLQEEEPQRQRELQEEEEQLRKLERQELRRERQEEE 294
Score = 26.2 bits (56), Expect = 7.8
Identities = 10/39 (25%), Positives = 23/39 (58%)
Query: 62 EDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEK 100
E+EE+ R + Q++ + +E +E + +E+R+ +K
Sbjct: 835 EEEEQLQRRERAQQLQEEEDGLQEDQERRRSQEQRRDQK 873
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 37.7 bits (86), Expect = 0.003
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 57 SKARAEDEEETTFRMESNLYQDQSEDKRE-----KKEAKEKEEKRKKEKKTAKEGESNLG 111
S E+ EE R E + +++ E K E K+ KE+EEK+KK+K+ KE
Sbjct: 2244 SSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKE 2303
Query: 112 LDLEEKE 118
EEKE
Sbjct: 2304 EVFEEKE 2310
Score = 34.3 bits (77), Expect = 0.029
Identities = 18/66 (27%), Positives = 37/66 (56%)
Query: 62 EDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGD 121
E+ EE R E +++ E + ++ E +E+E+K+KK++K +E + + E++E
Sbjct: 2255 EEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMS 2314
Query: 122 HERAKS 127
E +S
Sbjct: 2315 EEETES 2320
Score = 33.9 bits (76), Expect = 0.037
Identities = 18/67 (26%), Positives = 35/67 (52%)
Query: 62 EDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGD 121
E+EEE E Q + E++ +KK+ KEK+++ +EK+ E + + + E + D
Sbjct: 2264 EEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLSD 2323
Query: 122 HERAKST 128
E + +
Sbjct: 2324 EEEEEES 2330
Score = 33.5 bits (75), Expect = 0.049
Identities = 17/65 (26%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 62 EDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGD 121
E EE + MES L + + ++ +E +E+EE+ ++E++ +E E + +E+E G+
Sbjct: 2221 ESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREEEEVREEEE----ERKEEEEGE 2276
Query: 122 HERAK 126
++ +
Sbjct: 2277 EKQVE 2281
Score = 33.1 bits (74), Expect = 0.064
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 50 LANRLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKR--KKEKKTAKEGE 107
L + L ++ + +EEE E ++ E++ E+KE +E EEK+ K+E++ K+ +
Sbjct: 2233 LLDELEKQESLSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKK 2292
Query: 108 SNLGLDLEEKE 118
+++EKE
Sbjct: 2293 EKKKEEVQEKE 2303
Score = 29.6 bits (65), Expect = 0.71
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKE 118
R E+EE ++E + + + K +KKE +++E+ +EK+ E L EE+E
Sbjct: 2269 RKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLSDEEEE 2327
Score = 29.3 bits (64), Expect = 0.92
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 10/74 (13%)
Query: 55 WCSKARAEDEEETTFRMES------NLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGES 108
W K A++ EE + ME L Q++ + EKK+ E+EE +++ E E+
Sbjct: 1709 WQEKELAQELEELEWDMEELSWKEEELNQEEGKLVEEKKKLAEEEEALAWQREKLSEEET 1768
Query: 109 NLG----LDLEEKE 118
L L ++EKE
Sbjct: 1769 KLAQEEELLIQEKE 1782
Score = 28.5 bits (62), Expect = 1.6
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
K E EE+ + E + + E K+E+ + KE+ + K+E + +E ES L + EE+
Sbjct: 2270 KEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETES-LSDEEEEE 2328
Query: 118 E 118
E
Sbjct: 2329 E 2329
Score = 26.9 bits (58), Expect = 4.6
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 47 LVLLANRLWC-SKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKE 105
LV + N+L +K A+ EE+ T E+ + + + + EKK + ++ KK++K A+E
Sbjct: 1874 LVQVKNKLGMFNKILAQVEEKLTQEKETVIKKKEKLAETEKKLVQVEDSLAKKQEKLAQE 1933
Score = 26.6 bits (57), Expect = 6.0
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 61 AEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEG 106
A+ EE R E + + ++ KK AK+ E+ ++E+K AK+G
Sbjct: 1638 AQKEETLAQRGEKLSQEAEKLAQKRKKLAKKWEKVAREEEKLAKKG 1683
Score = 26.6 bits (57), Expect = 6.0
Identities = 16/67 (23%), Positives = 31/67 (46%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEP 119
+ E EEE + + +++ ++K E E KE+ ++ + + E E LEE+
Sbjct: 2279 QVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLSDEEEEEESCSLEEEVD 2338
Query: 120 GDHERAK 126
+ E K
Sbjct: 2339 REKEILK 2345
Score = 26.2 bits (56), Expect = 7.8
Identities = 14/59 (23%), Positives = 30/59 (50%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEE 116
K + +EEE L +++++ +E++ +++EK + K+ E E LG E+
Sbjct: 1746 KKKLAEEEEALAWQREKLSEEETKLAQEEELLIQEKEKLAQHKEKMPEEEERLGRKREQ 1804
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 37.7 bits (86), Expect = 0.003
Identities = 15/65 (23%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 53 RLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGL 112
++W + + D+EE E +++ + + + ++++ +E+EEK +++++ +E E +G
Sbjct: 496 KVWRQEEKMHDQEEKIREQEEKMWRQEEKIREQEEKIREQEEKIREQEEMMQEQEEKMG- 554
Query: 113 DLEEK 117
+ EEK
Sbjct: 555 EQEEK 559
Score = 32.3 bits (72), Expect = 0.11
Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 64 EEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKE 118
E+E R + + Q+Q E E++E +++EK +++++ +E E + E+KE
Sbjct: 534 EQEEKIREQEEMMQEQEEKMGEQEEKMQEQEKMRRQEEKIREQEEKI---REQKE 585
Score = 32.0 bits (71), Expect = 0.14
Identities = 13/71 (18%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 53 RLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGL 112
++W + + ++EE E +++ + + ++++ +E+EEK +++++ K E + L
Sbjct: 593 KIWEQEEKIREQEEMMQEQEEKMWEQEEKMCEQEEKMQEQEEKMRRQEE--KMWEQEVRL 650
Query: 113 DLEEKEPGDHE 123
+E++ +H+
Sbjct: 651 RQQEEKMQEHQ 661
Score = 31.2 bits (69), Expect = 0.24
Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEP 119
+ ++EE R E +++ + + +R+++ EKEEK ++ ++ E E + +LEEK
Sbjct: 329 KIREQEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKMRRLEEMMWEKEEKI-RELEEKM- 386
Query: 120 GDHERAK 126
HE+ K
Sbjct: 387 --HEQEK 391
Score = 31.2 bits (69), Expect = 0.24
Identities = 16/56 (28%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 62 EDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
+++EE E + Q+Q + +R++++ +E+EEK +++K+ +E E + + EEK
Sbjct: 547 QEQEEKMGEQEEKM-QEQEKMRRQEEKIREQEEKIREQKEKIREQEEKI-WEQEEK 600
Score = 30.4 bits (67), Expect = 0.41
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Query: 58 KARAED---EEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDL 114
K R E+ E+E +R E + ++Q E R+K++ E+E+ RK+E+K ++ E D
Sbjct: 451 KIREEEKRQEQEEMWRQEEKI-REQEEIWRQKEKMHEQEKIRKQEEKVWRQEEKM--HDQ 507
Query: 115 EEK 117
EEK
Sbjct: 508 EEK 510
Score = 29.3 bits (64), Expect = 0.92
Identities = 15/57 (26%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 52 NRLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEK-RKKEKKTAKEGE 107
N LW + +EE +R E + + + + + ++++ +E+EEK R++E+K ++ E
Sbjct: 288 NELW--NRLNQQQEEKMWRQEEKIQEWEEKIQEQEEKIREQEEKIREQEEKMRRQEE 342
Score = 29.3 bits (64), Expect = 0.92
Identities = 14/74 (18%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 53 RLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGL 112
++W + + ++EE E +++ Q E E+++ +E+E+++++E+ +E +
Sbjct: 417 KMWRQEEKIREQEEKIREQEKKMWR-QEEKIHEQEKIREEEKRQEQEEMWRQEEKIREQE 475
Query: 113 DLEEKEPGDHERAK 126
++ ++ HE+ K
Sbjct: 476 EIWRQKEKMHEQEK 489
Score = 29.3 bits (64), Expect = 0.92
Identities = 10/55 (18%), Positives = 31/55 (56%)
Query: 53 RLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGE 107
++W + + ++EE E + + + + ++++ E+EEK ++++K ++ E
Sbjct: 517 KMWRQEEKIREQEEKIREQEEKIREQEEMMQEQEEKMGEQEEKMQEQEKMRRQEE 571
Score = 28.9 bits (63), Expect = 1.2
Identities = 15/65 (23%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 53 RLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGL 112
++W + + ++ EE E + ++Q E RE++E ++E+ EK+ + +
Sbjct: 301 KMWRQEEKIQEWEEKIQEQEEKI-REQEEKIREQEEKMRRQEEMMWEKEEKMRRQEEMMW 359
Query: 113 DLEEK 117
+ EEK
Sbjct: 360 EKEEK 364
Score = 28.9 bits (63), Expect = 1.2
Identities = 13/67 (19%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEP 119
+ ++EE +R E + + + + + ++++ +E+EE +++++ K GE + +EK
Sbjct: 510 KIREQEEKMWRQEEKIREQEEKIREQEEKIREQEEMMQEQEE--KMGEQEEKMQEQEKMR 567
Query: 120 GDHERAK 126
E+ +
Sbjct: 568 RQEEKIR 574
Score = 28.5 bits (62), Expect = 1.6
Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 17/84 (20%)
Query: 54 LWCSKARAED------EEETTFRMESNLYQDQSEDKREKKE--------AKEKEEKRKKE 99
+W K + + +EE +R E ++ DQ E RE++E +E+EEK +++
Sbjct: 477 IWRQKEKMHEQEKIRKQEEKVWRQEEKMH-DQEEKIREQEEKMWRQEEKIREQEEKIREQ 535
Query: 100 KKTAKEGESNLGLDLEEKEPGDHE 123
++ +E E + +E++ G+ E
Sbjct: 536 EEKIREQEEM--MQEQEEKMGEQE 557
Score = 28.1 bits (61), Expect = 2.1
Identities = 11/51 (21%), Positives = 29/51 (56%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNL 110
+ +++EE E + + + + +R+++ EKEEK +++++ E E +
Sbjct: 315 KIQEQEEKIREQEEKIREQEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKM 365
Score = 27.7 bits (60), Expect = 2.7
Identities = 14/54 (25%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 64 EEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
E+E R E + + + + + +K++ +E+EEK ++++ +E E + + EEK
Sbjct: 562 EQEKMRRQEEKIREQEEKIREQKEKIREQEEKIWEQEEKIREQEEMM-QEQEEK 614
Score = 27.3 bits (59), Expect = 3.5
Identities = 11/54 (20%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 54 LWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGE 107
+W + + ++EE +R + +++ + K+E+K +++E+ +E+K ++ E
Sbjct: 464 MWRQEEKIREQEEI-WRQKEKMHEQEKIRKQEEKVWRQEEKMHDQEEKIREQEE 516
Score = 26.9 bits (58), Expect = 4.6
Identities = 16/54 (29%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 58 KARAEDE---EETTFRMESNLYQDQSEDKREKKEAKEKEEK-RKKEKKTAKEGE 107
K R ++E EE R + + +++ R++++ +E+EEK R++EKK ++ E
Sbjct: 391 KIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKIREQEKKMWRQEE 444
Score = 26.6 bits (57), Expect = 6.0
Identities = 14/64 (21%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 63 DEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGDH 122
++EE R+E +++ + + + +++ E+E+ R++E+K +E + + E+E
Sbjct: 360 EKEEKMRRLEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEK------IREQEKRQE 413
Query: 123 ERAK 126
+ AK
Sbjct: 414 QEAK 417
Score = 26.2 bits (56), Expect = 7.8
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 53 RLWCSKARAEDEE---ETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGE 107
++W + + ++E E R E Q E RE++E ++EK +++K K+ E
Sbjct: 438 KMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIREQEEIWRQKEKMHEQEKIRKQEE 495
>gi|115511012 coiled-coil domain containing 136 [Homo sapiens]
Length = 1154
Score = 37.7 bits (86), Expect = 0.003
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 61 AEDEEETTFRMESNLYQDQSEDKRE--KKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKE 118
+E + ET +E LY S+ K + KE ++KEE +++K+ +E + G +L E
Sbjct: 1007 SESDLETRKSLEVVLYYKASQRKLDGLAKEEEKKEEMEEEKKQVKEEAKEQCGDELVA-E 1065
Query: 119 PGDHERAKST 128
P D E AKST
Sbjct: 1066 PADPEEAKST 1075
Score = 27.7 bits (60), Expect = 2.7
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 75 LYQDQSEDKREKKEAKEKEEKRKKEKKTAK-EGESNLGLDLEEKE 118
LY+++ E++ E++E +E+EE+ +K + GL L E E
Sbjct: 13 LYEEEEEEEEEEEEVEEEEEQVQKGGSVGSLSVNKHRGLSLTETE 57
Score = 27.7 bits (60), Expect = 2.7
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 80 SEDKREKKEAKEKEEKRKKEKKTAKEGESNL 110
+ED+ E +E KE+EEK + ++ + +S+L
Sbjct: 1075 TEDQEENEEDKEEEEKEEDSEEEEDDADSSL 1105
>gi|104526627 triadin [Homo sapiens]
Length = 729
Score = 37.4 bits (85), Expect = 0.003
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 78 DQSEDKREKKEAKEKEEKRKKEKKTAKE-GESNLGLDLEEKEPGDHERAK 126
++ E +++K E K E +KKEK+ K+ E +D+E+KEPG K
Sbjct: 310 EEKEGEKKKAEKKVTSETKKKEKEDIKKKSEKETAIDVEKKEPGKASETK 359
Score = 31.6 bits (70), Expect = 0.19
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKR--KKEKKTAKEGESNLGLDLE 115
K + E +E+ ++++ + + E +EK KEK EK+ KEK KE L E
Sbjct: 145 KDKTEKQEKPERKIQTKVTHKEKEKGKEKVREKEKPEKKATHKEKIEKKEKPETKTLAKE 204
Query: 116 EKEPGDHERAK 126
+K+ E+++
Sbjct: 205 QKKAKTAEKSE 215
Score = 30.4 bits (67), Expect = 0.41
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 57 SKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKR--KKEKKTAKEGESNLGLDL 114
+K +++E+ ++ ++ +EK E KEK E + KE+K AK E +
Sbjct: 160 TKVTHKEKEKGKEKVREKEKPEKKATHKEKIEKKEKPETKTLAKEQKKAKTAEKSEEKTK 219
Query: 115 EEKEPGDHERAKST 128
+E + G E+ K T
Sbjct: 220 KEVKGGKQEKVKQT 233
Score = 26.9 bits (58), Expect = 4.6
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Query: 77 QDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGDH------ERAKSTV 129
+ + + K+ KK A+ ++ K KK++K K E E P D ERAK +
Sbjct: 375 EKKEDSKKTKKPAEVEQPKGKKQEKKEKHVEPAKSPKKEHSVPSDKQVKAKTERAKEEI 433
Score = 26.9 bits (58), Expect = 4.6
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 15/59 (25%)
Query: 64 EEETTFRMESNLYQDQS-------------EDKREKKEA--KEKEEKRKKEKKTAKEGE 107
EE+TT +E + +++S + K EK A KEKE + KK++K +K G+
Sbjct: 447 EEKTTKTVEQEIRKEKSGKTSSILKDKEPIKGKEEKVPASLKEKEPETKKDEKMSKAGK 505
Score = 26.6 bits (57), Expect = 6.0
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKR-----EKKEAKEKEEKRKKEKKTAK--EGESNLGL 112
+ + E+ET +E SE K+ + A +K+EK++ KKT K E E G
Sbjct: 336 KKKSEKETAIDVEKKEPGKASETKQGTVKIAAQAAAKKDEKKEDSKKTKKPAEVEQPKGK 395
Query: 113 DLEEKE 118
E+KE
Sbjct: 396 KQEKKE 401
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 37.0 bits (84), Expect = 0.004
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 62 EDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGD 121
E+EEE E ++++ ED+ E E +E+EE+ +E+ +EGE L+ EE+E +
Sbjct: 896 EEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGE----LEEEEEEEDE 951
Query: 122 HE 123
E
Sbjct: 952 EE 953
Score = 30.8 bits (68), Expect = 0.32
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 62 EDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGD 121
E+EEE E +D E++ +++E E+EE+ ++E + E E +LEE+E +
Sbjct: 893 EEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEG---ELEEEEEEE 949
Query: 122 HE 123
E
Sbjct: 950 DE 951
Score = 30.0 bits (66), Expect = 0.54
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 62 EDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEP 119
E+EEE E +++ E + E++E E+EE+ +E + + G + G ++EE P
Sbjct: 922 EEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDLEFGTA--GGEVEEGAP 977
Score = 29.6 bits (65), Expect = 0.71
Identities = 16/58 (27%), Positives = 34/58 (58%)
Query: 61 AEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKE 118
A +E+ T + S+ +++ E++ E++E +E+EE+ E++ E E + EE+E
Sbjct: 873 ALEEDLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEE 930
Score = 28.1 bits (61), Expect = 2.1
Identities = 14/60 (23%), Positives = 35/60 (58%)
Query: 64 EEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGDHE 123
EE+ T ++ +++ E++ E++E +E+EE+ + ++ ++ E + EE+E + E
Sbjct: 875 EEDLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEE 934
Score = 26.6 bits (57), Expect = 6.0
Identities = 11/46 (23%), Positives = 30/46 (65%)
Query: 62 EDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGE 107
E+E+E + E +++ E++ E++E + +EE+ +++++ +E E
Sbjct: 913 EEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELE 958
>gi|13236559 hypothetical protein LOC79169 [Homo sapiens]
Length = 263
Score = 37.0 bits (84), Expect = 0.004
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
K RAED+ E++ ++ ++K++KK+ K K+EK+KK+K+ + E+ E+
Sbjct: 168 KPRAEDQTESSCES----HRKSKKEKKKKKKRKHKKEKKKKDKEHRRPAEATSSPTSPER 223
Query: 118 EPGDHERAKS 127
H + S
Sbjct: 224 PRHHHHDSDS 233
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 36.6 bits (83), Expect = 0.006
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
K + + E + R E +++ E +RE K+ +E++ K++++KK KE + EK
Sbjct: 99 KEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERK-------REK 151
Query: 118 EPGDHERAK 126
E G ER +
Sbjct: 152 ERGKRERKR 160
Score = 34.3 bits (77), Expect = 0.029
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
K R +E R E + Q +++REK+ K K+EK+K+E+K E + +E+
Sbjct: 67 KKRERGKERERKRKER---EKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKER 123
Query: 118 EPGDHER 124
E + +R
Sbjct: 124 ERENKQR 130
Score = 33.5 bits (75), Expect = 0.049
Identities = 17/59 (28%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEE 116
K R + +E R + +++ E K+E+K+ + K+++RKK++KT ++ +S + L E
Sbjct: 170 KKRERNRKE---RKKERERKERRERKKERKKERRKKKERKKDRKTDRQTDSQVFRPLRE 225
Score = 32.0 bits (71), Expect = 0.14
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
+ R + E++ + E +++ +REK+ + +E++R+K KK K+ E K
Sbjct: 56 RERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKK--------RERK 107
Query: 118 EPGDHERAK 126
+ G ER K
Sbjct: 108 QRGRRERKK 116
Score = 31.2 bits (69), Expect = 0.24
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 56 CSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGE-SNLGLDL 114
C++ +E ++E R + + + +K K+E +KE+K++K+++ KE E +
Sbjct: 29 CTQRESERKKERREREK----RKREREKERKRERGKKEKKKRKKRERGKERERKRKEREK 84
Query: 115 EEKEPGDHERAK 126
+ KE + ER K
Sbjct: 85 QRKERREKERRK 96
Score = 31.2 bits (69), Expect = 0.24
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREK----KEAKEKEEKRKKEKKTAKEGESNLGLD 113
K R E E E R E + + + +R++ KE ++E KRKK KK +E +
Sbjct: 118 KERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRK 177
Query: 114 LEEKEPGDHER 124
+KE ER
Sbjct: 178 ERKKERERKER 188
Score = 30.8 bits (68), Expect = 0.32
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKE 105
K R + E + R + + + +++E+K+ +E++E+R+++K+ KE
Sbjct: 151 KERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKE 198
Score = 30.8 bits (68), Expect = 0.32
Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Query: 58 KARAEDEEETTFRMESNLYQDQSE----DKREKKEAKEKEEKRKKEKK 101
K + +EE + E N + + E ++RE+K+ ++KE ++KKE+K
Sbjct: 159 KRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKKERK 206
Score = 30.0 bits (66), Expect = 0.54
Identities = 15/61 (24%), Positives = 31/61 (50%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
+ R E +++ + + + E KR+K+ K++ ++RK+EK+ K EE+
Sbjct: 109 RGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEER 168
Query: 118 E 118
E
Sbjct: 169 E 169
Score = 30.0 bits (66), Expect = 0.54
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
K R + + R + +++ KR+K+E ++K E+ +KE+K +E + E K
Sbjct: 137 KRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKER----RERK 192
Query: 118 EPGDHERAK 126
+ ER K
Sbjct: 193 KERKKERRK 201
Score = 28.9 bits (63), Expect = 1.2
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 59 ARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKE 118
+RA + T +M S + + +RE + KE+ E+ K++++ KE + G E+K+
Sbjct: 7 SRAAVKLNTELQMVSCSHISKPCTQRESERKKERREREKRKREREKERKRERG-KKEKKK 65
Query: 119 PGDHERAK 126
ER K
Sbjct: 66 RKKRERGK 73
Score = 28.9 bits (63), Expect = 1.2
Identities = 13/67 (19%), Positives = 33/67 (49%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
+ + E+ + E + + E++ +K+E KE K+++E+K +E + + +K
Sbjct: 143 RRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKK 202
Query: 118 EPGDHER 124
+ +R
Sbjct: 203 KERKKDR 209
Score = 28.9 bits (63), Expect = 1.2
Identities = 14/62 (22%), Positives = 32/62 (51%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
K R ++E E + + E K ++ KE++++R+K+K+ K+ +++ D +
Sbjct: 161 KKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKKERKKDRKTDRQTDSQVF 220
Query: 118 EP 119
P
Sbjct: 221 RP 222
Score = 28.1 bits (61), Expect = 2.1
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 81 EDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKEPGDHERAK 126
E KR+K++ +E+E+KR++ +K K+ +KE R K
Sbjct: 157 ERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKK 202
Score = 26.6 bits (57), Expect = 6.0
Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
K R E + E + + +++REKK + ++E RKKE++ + E E +
Sbjct: 142 KRRKERKREKERGKRERKRKKRKKEEREKKRERNRKE-RKKERERKERRERKKERKKERR 200
Query: 118 EPGDHERAKST 128
+ + ++ + T
Sbjct: 201 KKKERKKDRKT 211
Score = 26.2 bits (56), Expect = 7.8
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 60 RAEDEEETTFRMESNLYQDQSEDKREK-KEAKEKEEKRKKEKKTAKEGESNLGLDLEEKE 118
+ E E R +++ E KRE+ ++ ++KE +RK+ ++ KE + E K+
Sbjct: 148 KREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKKERKK 207
Query: 119 PGDHER 124
+R
Sbjct: 208 DRKTDR 213
>gi|169210053 PREDICTED: hypothetical protein [Homo sapiens]
Length = 185
Score = 36.6 bits (83), Expect = 0.006
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 49 LLANRLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGES 108
L+A + +EEE +E + + E+K E+KE E+EE++++EK+ +E E
Sbjct: 105 LVAEECSAQQGLPVEEEE----VEEEEEEVEEEEKEEEKEEDEEEEEKEEEKEEDEEEEE 160
Query: 109 NLGLDLEEKE 118
G +EE++
Sbjct: 161 KEGKKMEEEK 170
Score = 35.8 bits (81), Expect = 0.010
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 6/118 (5%)
Query: 15 LSPVEAQQATEHRLKPWLVGLAAVVGFLFIVYL-----VLLANRLWCSKARAEDEEETTF 69
L P + E L+ W VGL + + + NRL ++ A EE +
Sbjct: 53 LRPSTCLEVEEKWLQRWAVGLPVKDSGVSQAKIWGKNDLSAGNRLSVARTAALVAEECSA 112
Query: 70 RMESNLYQDQSEDKREKKEAKEK-EEKRKKEKKTAKEGESNLGLDLEEKEPGDHERAK 126
+ + +++ E++ E+ E +EK EEK + E++ KE E + EEKE E K
Sbjct: 113 QQGLPVEEEEVEEEEEEVEEEEKEEEKEEDEEEEEKEEEKEEDEEEEEKEGKKMEEEK 170
Score = 34.3 bits (77), Expect = 0.029
Identities = 15/49 (30%), Positives = 31/49 (63%)
Query: 62 EDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNL 110
E+EE+ + E +++ E+K E +E +EKE K+ +E+K +E ++ +
Sbjct: 131 EEEEKEEEKEEDEEEEEKEEEKEEDEEEEEKEGKKMEEEKVEEEIDTEI 179
Score = 33.9 bits (76), Expect = 0.037
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 62 EDEEETTFRMESNLYQDQSEDKREKKEAKEK-EEKRKKEKKTAKEGESNLGLDLE 115
E+EEE E +++ E++ EK+E KE+ EE+ +KE K +E + +D E
Sbjct: 124 EEEEEEVEEEEKEEEKEEDEEEEEKEEEKEEDEEEEEKEGKKMEEEKVEEEIDTE 178
Score = 32.3 bits (72), Expect = 0.11
Identities = 14/57 (24%), Positives = 32/57 (56%)
Query: 62 EDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEKE 118
E+E E + E ++ E+K E+KE E+EE+++ +K ++ E + +++ +
Sbjct: 127 EEEVEEEEKEEEKEEDEEEEEKEEEKEEDEEEEEKEGKKMEEEKVEEEIDTEIQRTQ 183
>gi|56090620 NFKB activating protein-like [Homo sapiens]
Length = 402
Score = 36.6 bits (83), Expect = 0.006
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 62 EDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAK------EGESNLGLDLE 115
EDEEE T + S+ SE+ R+KK ++ + +K++K K + + + +SN D
Sbjct: 155 EDEEEVTHQKSSSS-DSNSEEHRKKKTSRSRNKKKRKNKSSKRKHRKYSDSDSNSESDTN 213
Query: 116 EKEPGDHERAKS 127
D +R K+
Sbjct: 214 SDSDDDKKRVKA 225
Score = 35.8 bits (81), Expect = 0.010
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 57 SKARAEDEEETTFRMESNLYQDQSEDKR-----EKKEAKEKEEKRKKEKKTAKEGESNLG 111
SK + ++ ES+ D +DK+ +KK+ K+ + K+KK KKT KE +
Sbjct: 194 SKRKHRKYSDSDSNSESDTNSDSDDDKKRVKAKKKKKKKKHKTKKKKNKKTKKESSDSSC 253
Query: 112 LDLEE 116
D EE
Sbjct: 254 KDSEE 258
>gi|66792814 retrotransposon gag domain containing 4 [Homo sapiens]
Length = 569
Score = 36.6 bits (83), Expect = 0.006
Identities = 17/64 (26%), Positives = 36/64 (56%)
Query: 53 RLWCSKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGL 112
R+ + +++EE + E + + + +++ E++E K+KEE+ + K +EGES
Sbjct: 365 RMRAFQQEMKEKEEEEMKKEEEMKKKEEKEEEEEEEMKQKEEEEEIRNKNEEEGESKDEE 424
Query: 113 DLEE 116
D +E
Sbjct: 425 DEDE 428
Score = 34.3 bits (77), Expect = 0.029
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 62 EDEEETTFRMESN-------LYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDL 114
ED+E R+ S +Q + ++K E++ KE+E K+K+EK+ +E E +
Sbjct: 348 EDQEARRHRLHSKDQRKRMRAFQQEMKEKEEEEMKKEEEMKKKEEKEEEEEEEMKQKEEE 407
Query: 115 EEKEPGDHERAKS 127
EE + E +S
Sbjct: 408 EEIRNKNEEEGES 420
Score = 33.5 bits (75), Expect = 0.049
Identities = 13/64 (20%), Positives = 37/64 (57%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
+ ++D+ + + + + + E+ ++++E K+KEEK ++E++ K+ E + + +
Sbjct: 356 RLHSKDQRKRMRAFQQEMKEKEEEEMKKEEEMKKKEEKEEEEEEEMKQKEEEEEIRNKNE 415
Query: 118 EPGD 121
E G+
Sbjct: 416 EEGE 419
Score = 26.9 bits (58), Expect = 4.6
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 24/89 (26%)
Query: 59 ARAEDEEETTFRMESNLYQDQSED--------------------KREKKEAKEKEEKRKK 98
A + +EEE+ E Y + ED ++E KE +E+E K+++
Sbjct: 330 APSPNEEES----EDEEYYSEDEDQEARRHRLHSKDQRKRMRAFQQEMKEKEEEEMKKEE 385
Query: 99 EKKTAKEGESNLGLDLEEKEPGDHERAKS 127
E K +E E ++++KE + R K+
Sbjct: 386 EMKKKEEKEEEEEEEMKQKEEEEEIRNKN 414
>gi|239745093 PREDICTED: hypothetical protein XP_002343359 [Homo
sapiens]
Length = 142
Score = 36.2 bits (82), Expect = 0.008
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
K R E E R E + E + EK+E +E+EE+ ++E++ +E E + L E+
Sbjct: 71 KRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRER 130
Query: 118 EPGDHER 124
E E+
Sbjct: 131 ETETEEK 137
Score = 33.1 bits (74), Expect = 0.064
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 57 SKARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEE 116
+ AR E R E + + E+KR + + +EKEE++++E++ +E E EE
Sbjct: 60 TSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEE------EE 113
Query: 117 KEPGDHE 123
+E + E
Sbjct: 114 EEEEEEE 120
Score = 30.4 bits (67), Expect = 0.41
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 7/67 (10%)
Query: 64 EEETTFRMESNLYQDQSEDKREKK-------EAKEKEEKRKKEKKTAKEGESNLGLDLEE 116
EE T R + +RE+K E K +EEKR++ K+ KE E + EE
Sbjct: 48 EEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEE 107
Query: 117 KEPGDHE 123
+E + E
Sbjct: 108 EEEEEEE 114
Score = 30.4 bits (67), Expect = 0.41
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 77 QDQSEDKREKK--EAKEKEEKRK----KEKKTAKEGESNLGLDLEEKEPGDHERAKS 127
Q + E +RE+K E K +EEKR+ +EK+ KE E + EE+E + E S
Sbjct: 66 QRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVS 122
>gi|7661952 squamous cell carcinoma antigen recognized by T cells 3
[Homo sapiens]
Length = 963
Score = 36.2 bits (82), Expect = 0.008
Identities = 18/72 (25%), Positives = 37/72 (51%)
Query: 58 KARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDLEEK 117
+ +A ++E + E + + + EKK K+K++ R EK+ A E + D EE+
Sbjct: 580 RMKAAEKEAALVQQEEEKAEQRKRARAEKKALKKKKKIRGPEKRGADEDDEKEWGDDEEE 639
Query: 118 EPGDHERAKSTV 129
+P R ++++
Sbjct: 640 QPSKRRRVENSI 651
Score = 32.7 bits (73), Expect = 0.083
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 59 ARAEDEEETTFRMESNLYQDQSEDKREKKEAKEKEEKRKKEKKTAKEGESNLGLDL-EEK 117
AR ++ E+ L Q + E ++K A+ +++ KK+KK G G D +EK
Sbjct: 574 ARVNEQRMKAAEKEAALVQQEEEKAEQRKRARAEKKALKKKKKI--RGPEKRGADEDDEK 631
Query: 118 EPGDHE 123
E GD E
Sbjct: 632 EWGDDE 637
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.129 0.351
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,803,720
Number of Sequences: 37866
Number of extensions: 224886
Number of successful extensions: 12060
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 280
Number of HSP's that attempted gapping in prelim test: 4061
Number of HSP's gapped (non-prelim): 5178
length of query: 130
length of database: 18,247,518
effective HSP length: 90
effective length of query: 40
effective length of database: 14,839,578
effective search space: 593583120
effective search space used: 593583120
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.