A1CF 12051

Name: A1CF	Sequence: fasta or formatted (586aa)		NCBI GI: 20357572
Description: apobec-1 complementation factor isoform 1		Referenced in: RNA Editing and Other RNA Modifications
Other entries for this name: alt prot [594aa] apobec-1 complementation factor isoform 2 alt prot [594aa] apobec-1 complementation factor isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.2 60 5 C cysteine 0.9 5 1 D aspartate 4.4 26 1 E glutamate 6.3 37 2 F phenylalanine 3.2 19 1 G glycine 9.6 56 2 H histidine 1.4 8 1 I isoleucine 4.9 29 2 K lysine 6.3 37 2 L leucine 7.8 46 2 M methionine 2.6 15 3 N asparagine 3.9 23 2 P proline 6.1 36 3 Q glutamine 3.9 23 1 R arginine 5.5 32 2 S serine 4.1 24 2 T threonine 6.3 37 3 V valine 6.7 39 2 W tryptophan 0.7 4 1 Y tyrosine 5.1 30 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 apobec-1 complementation factor isoform 1 A1CF 0.994 apobec-1 complementation factor isoform 2 A1CF 0.948 apobec-1 complementation factor isoform 3 RBM47 0.433 RNA binding motif protein 47 isoform a RBM47 0.399 RNA binding motif protein 47 isoform b RBM46 0.380 RNA binding motif protein 46 HNRNPR 0.268 heterogeneous nuclear ribonucleoprotein R isoform 4... HNRNPR 0.268 heterogeneous nuclear ribonucleoprotein R isoform 2 [... SYNCRIP 0.267 synaptotagmin binding, cytoplasmic RNA interacting ... SYNCRIP 0.267 synaptotagmin binding, cytoplasmic RNA interacting ... SYNCRIP 0.267 synaptotagmin binding, cytoplasmic RNA interacting ... SYNCRIP 0.267 synaptotagmin binding, cytoplasmic RNA interacting ... HNRNPR 0.264 heterogeneous nuclear ribonucleoprotein R isoform 3... HNRNPR 0.264 heterogeneous nuclear ribonucleoprotein R isoform 1... SYNCRIP 0.225 synaptotagmin binding, cytoplasmic RNA interacting ... SYNCRIP 0.225 synaptotagmin binding, cytoplasmic RNA interacting ... DND1 0.137 dead end homolog 1 PABPC4L 0.053 poly(A) binding protein, cytoplasmic 4-like PABPC4 0.042 poly A binding protein, cytoplasmic 4 isoform 3 [Ho... PABPC4 0.042 poly A binding protein, cytoplasmic 4 isoform 2 [Homo... PABPC4 0.042 poly A binding protein, cytoplasmic 4 isoform 1 [Ho... PABPC3 0.039 poly(A) binding protein, cytoplasmic 3 PABPC1 0.038 poly(A) binding protein, cytoplasmic 1 PABPC5 0.036 poly(A) binding protein, cytoplasmic 5 NCL 0.034 nucleolin BRUNOL5 0.034 bruno-like 5, RNA binding protein isoform 1 BRUNOL4 0.030 bruno-like 4, RNA binding protein isoform 4 RAVER2 0.030 ribonucleoprotein, PTB-binding 2 TIA1 0.029 TIA1 protein isoform 1 TIA1 0.029 TIA1 protein isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.