Guide to the Human Genome
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Name: MYCBPAP Sequence: fasta or formatted (984aa) NCBI GI: 203098334
Description:

Myc-binding protein-associated protein

Referenced in:

Myc and Related Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         57           2
 C cysteine            1.2         12           2
 D aspartate           5.5         54           2
 E glutamate           9.0         89           2
 F phenylalanine       2.7         27           3
 G glycine             5.7         56           2
 H histidine           2.4         24           2
 I isoleucine          4.2         41           2
 K lysine              7.6         75           2
 L leucine            10.8        106           2
 M methionine          2.2         22           1
 N asparagine          2.4         24           2
 P proline             7.0         69           3
 Q glutamine           5.0         49           2
 R arginine            7.4         73           2
 S serine              6.5         64           3
 T threonine           5.6         55           1
 V valine              5.6         55           2
 W tryptophan          1.7         17           1
 Y tyrosine            1.5         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Myc-binding protein-associated protein 
CCAR1                 0.008   cell-cycle and apoptosis regulatory protein 1 
LRRC43                0.006   leucine rich repeat containing 43 isoform 2 
LRRC43                0.006   leucine rich repeat containing 43 isoform 1 
MAP1B                 0.005   microtubule-associated protein 1B 
TRDN                  0.005   triadin 
NEFH                  0.005   neurofilament, heavy polypeptide 200kDa 
PIK3IP1               0.005   HGFL protein isoform 1 
C9orf86               0.005   Rab-like GTP-binding protein 1 isoform 1 
KIF13A                0.005   kinesin family member 13A isoform d 
KIF13A                0.005   kinesin family member 13A isoform c 
KIF13A                0.005   kinesin family member 13A isoform b 
UBTF                  0.005   upstream binding transcription factor, RNA polymera...
UBTF                  0.005   upstream binding transcription factor, RNA polymera...
UBTF                  0.005   upstream binding transcription factor, RNA polymerase...
CHD5                  0.005   chromodomain helicase DNA binding protein 5 
C1orf173              0.005   hypothetical protein LOC127254 
SR140                 0.004   U2-associated SR140 protein 
ARHGEF10L             0.004   Rho guanine nucleotide exchange factor (GEF) 10-like...
CYLC2                 0.004   cylicin 2 
NOLC1                 0.004   nucleolar and coiled-body phosphoprotein 1 
OSBPL8                0.004   oxysterol-binding protein-like protein 8 isoform b [...
OSBPL8                0.004   oxysterol-binding protein-like protein 8 isoform a [...
USP8                  0.004   ubiquitin specific peptidase 8 
USP8                  0.004   ubiquitin specific peptidase 8 
USP8                  0.004   ubiquitin specific peptidase 8 
BAZ1B                 0.004   bromodomain adjacent to zinc finger domain, 1B [Homo...
PRG4                  0.004   proteoglycan 4 isoform D 
PRG4                  0.004   proteoglycan 4 isoform C 
PRG4                  0.004   proteoglycan 4 isoform B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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