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Search of human proteins with 20149583
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|20149583 nudix-type motif 6 isoform a [Homo sapiens]
(316 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|20149583 nudix-type motif 6 isoform a [Homo sapiens] 652 0.0
gi|37594461 nudix-type motif 6 isoform b [Homo sapiens] 308 4e-84
gi|41393549 nudix-type motif 10 [Homo sapiens] 50 3e-06
gi|40317634 nudix-type motif 4 isoform beta [Homo sapiens] 49 8e-06
gi|37221177 nudix-type motif 11 [Homo sapiens] 47 2e-05
gi|40317632 nudix-type motif 4 isoform alpha [Homo sapiens] 46 4e-05
gi|5729804 nudix-type motif 3 [Homo sapiens] 42 5e-04
gi|118026927 nudix (nucleoside diphosphate linked moiety X)-type... 41 0.002
gi|31542498 DCP2 decapping enzyme [Homo sapiens] 40 0.004
gi|62543567 nudix (nucleoside diphosphate linked moiety X)-type ... 37 0.030
gi|22219467 nudix-type motif 2 [Homo sapiens] 35 0.087
gi|22219465 nudix-type motif 2 [Homo sapiens] 35 0.087
gi|4502125 nudix-type motif 2 [Homo sapiens] 35 0.087
gi|50593112 nudix-type motif 13 [Homo sapiens] 32 0.96
gi|188536065 CD36 antigen [Homo sapiens] 30 2.1
gi|188536063 CD36 antigen [Homo sapiens] 30 2.1
gi|48375178 CD36 antigen [Homo sapiens] 30 2.1
gi|48375176 CD36 antigen [Homo sapiens] 30 2.1
gi|48375180 CD36 antigen [Homo sapiens] 30 2.1
gi|31542309 chondroitin sulfate synthase 1 [Homo sapiens] 30 2.8
gi|119120915 rhophilin 1 [Homo sapiens] 29 4.8
gi|32469515 nudix-type motif 8 [Homo sapiens] 28 8.2
>gi|20149583 nudix-type motif 6 isoform a [Homo sapiens]
Length = 316
Score = 652 bits (1683), Expect = 0.0
Identities = 316/316 (100%), Positives = 316/316 (100%)
Query: 1 MRQPLSWGRWRAMLARTYGPGPSAGYRWASGAQGYVRNPPVGACDLQGELDRFGGISVRL 60
MRQPLSWGRWRAMLARTYGPGPSAGYRWASGAQGYVRNPPVGACDLQGELDRFGGISVRL
Sbjct: 1 MRQPLSWGRWRAMLARTYGPGPSAGYRWASGAQGYVRNPPVGACDLQGELDRFGGISVRL 60
Query: 61 ARLDALDRLDAAAFQKGLQAAVQQWRSEGRTAVWLHIPILQSRFIAPAASLGFCFHHAES 120
ARLDALDRLDAAAFQKGLQAAVQQWRSEGRTAVWLHIPILQSRFIAPAASLGFCFHHAES
Sbjct: 61 ARLDALDRLDAAAFQKGLQAAVQQWRSEGRTAVWLHIPILQSRFIAPAASLGFCFHHAES 120
Query: 121 DSSTLTLWLREGPSRLPGYASHQVGVAGAVFDESTRKILVVQDRNKLKNMWKFPGGLSEP 180
DSSTLTLWLREGPSRLPGYASHQVGVAGAVFDESTRKILVVQDRNKLKNMWKFPGGLSEP
Sbjct: 121 DSSTLTLWLREGPSRLPGYASHQVGVAGAVFDESTRKILVVQDRNKLKNMWKFPGGLSEP 180
Query: 181 EEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIICRLKPYSFTINFCQ 240
EEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIICRLKPYSFTINFCQ
Sbjct: 181 EEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIICRLKPYSFTINFCQ 240
Query: 241 EECLRCEWMDLNDLAKTENTTPITSRVARLLLYGYREGFDKIDLTVEELPAVYTGLFYKL 300
EECLRCEWMDLNDLAKTENTTPITSRVARLLLYGYREGFDKIDLTVEELPAVYTGLFYKL
Sbjct: 241 EECLRCEWMDLNDLAKTENTTPITSRVARLLLYGYREGFDKIDLTVEELPAVYTGLFYKL 300
Query: 301 YHKELPENYKTMKGID 316
YHKELPENYKTMKGID
Sbjct: 301 YHKELPENYKTMKGID 316
>gi|37594461 nudix-type motif 6 isoform b [Homo sapiens]
Length = 147
Score = 308 bits (789), Expect = 4e-84
Identities = 147/147 (100%), Positives = 147/147 (100%)
Query: 170 MWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIICRL 229
MWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIICRL
Sbjct: 1 MWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIICRL 60
Query: 230 KPYSFTINFCQEECLRCEWMDLNDLAKTENTTPITSRVARLLLYGYREGFDKIDLTVEEL 289
KPYSFTINFCQEECLRCEWMDLNDLAKTENTTPITSRVARLLLYGYREGFDKIDLTVEEL
Sbjct: 61 KPYSFTINFCQEECLRCEWMDLNDLAKTENTTPITSRVARLLLYGYREGFDKIDLTVEEL 120
Query: 290 PAVYTGLFYKLYHKELPENYKTMKGID 316
PAVYTGLFYKLYHKELPENYKTMKGID
Sbjct: 121 PAVYTGLFYKLYHKELPENYKTMKGID 147
>gi|41393549 nudix-type motif 10 [Homo sapiens]
Length = 164
Score = 49.7 bits (117), Expect = 3e-06
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 153 ESTRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQH 212
E ++L+V ++ + W PGG EPEE+ G AVREV+EE G+K + +L + +Q+
Sbjct: 28 EREDEVLLVSS-SRYPDRWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGVFEQN 86
Query: 213 TNP 215
+P
Sbjct: 87 QDP 89
>gi|40317634 nudix-type motif 4 isoform beta [Homo sapiens]
Length = 181
Score = 48.5 bits (114), Expect = 8e-06
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 10/107 (9%)
Query: 153 ESTRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQH 212
E ++L+V ++ + W PGG EPEE+ G AVREV+EE G+K + +L I +Q
Sbjct: 29 EQEDEVLLVSS-SRYPDQWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGIFEQ- 86
Query: 213 TNPGAFGKSDMYIIC---RLKPYSFTINFCQEECLRCEWMDLNDLAK 256
N ++ +Y++ L+ + ++N ++ EW + D K
Sbjct: 87 -NQDRKHRTYVYVLTVTEILEDWEDSVNIGRKR----EWFKVEDAIK 128
>gi|37221177 nudix-type motif 11 [Homo sapiens]
Length = 164
Score = 47.0 bits (110), Expect = 2e-05
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 153 ESTRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQH 212
E ++L+V ++ + W PGG EPEE+ G AVREV+EE G+K + +L + +Q+
Sbjct: 28 EREDEVLLVSS-SRYPDRWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGVFEQN 86
>gi|40317632 nudix-type motif 4 isoform alpha [Homo sapiens]
Length = 180
Score = 46.2 bits (108), Expect = 4e-05
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 153 ESTRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSI 208
E ++L+V ++ + W PGG EPEE+ G AVREV+EE G+K + +L I
Sbjct: 29 EQEDEVLLVSS-SRYPDQWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGI 83
>gi|5729804 nudix-type motif 3 [Homo sapiens]
Length = 172
Score = 42.4 bits (98), Expect = 5e-04
Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 153 ESTRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQH 212
ES ++L+V ++ + W PGG EPEE+ AVREV EE G+K ++ I +
Sbjct: 29 ESEEEVLLVSS-SRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFENQ 87
Query: 213 TNPGAFGKSDMYIICRLKPYSFTINFCQEECLRCEWMDLNDLAKT-ENTTPITSRVARLL 271
+ + L+ + ++N ++ EW + D K + P+ + L
Sbjct: 88 ERKHRTYVYVLIVTEVLEDWEDSVNIGRKR----EWFKIEDAIKVLQYHKPVQASYFETL 143
Query: 272 LYGY 275
GY
Sbjct: 144 RQGY 147
>gi|118026927 nudix (nucleoside diphosphate linked moiety X)-type
motif 18 [Homo sapiens]
Length = 323
Score = 40.8 bits (94), Expect = 0.002
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 149 AVFDESTRKILVVQD-RNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLS 207
AVF ++L++Q+ + + + W P G EP E I + REV EE G+ E ++LS
Sbjct: 48 AVFLSEQDEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPETLLS 107
Query: 208 IRQQ 211
+ ++
Sbjct: 108 VEER 111
>gi|31542498 DCP2 decapping enzyme [Homo sapiens]
Length = 420
Score = 39.7 bits (91), Expect = 0.004
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 136 LPGYASHQVGV---AGAVFDESTRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREV 192
L + +++GV + DE+ +L+VQ K+ W FP G EE D A REV
Sbjct: 87 LDEWKEYKMGVPTYGAIILDETLENVLLVQGY-LAKSGWGFPKGKVNKEEAPHDCAAREV 145
Query: 193 FEETG 197
FEETG
Sbjct: 146 FEETG 150
>gi|62543567 nudix (nucleoside diphosphate linked moiety X)-type
motif 17 [Homo sapiens]
Length = 328
Score = 36.6 bits (83), Expect = 0.030
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 134 SRLPGYASHQVGVAGAVFDESTRKILVVQDRNKLK---NMWKFPGGLSEPEEDIGDTAVR 190
+ LP +GVA + S + +L+ + L N+W PGG E EE++ D +R
Sbjct: 83 AELPTDRGVDLGVA-VILQSSDKTVLLTRRARTLSVSPNLWVPPGGHVELEEELLDGGLR 141
Query: 191 EVFEETGI 198
E++EE+G+
Sbjct: 142 ELWEESGL 149
>gi|22219467 nudix-type motif 2 [Homo sapiens]
Length = 147
Score = 35.0 bits (79), Expect = 0.087
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 152 DESTRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQ 211
D + + L++Q + + + W P G EP ED +TA+RE EE GI++ +++ ++
Sbjct: 20 DNNAIEFLLLQASDGIHH-WTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKR 78
Query: 212 HTNPGAFG--KSDMYIICRLKPYSFTINFCQEECLRCEWMDLND 253
N A K+ +Y + +K Y I E W+ L +
Sbjct: 79 ELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEH-QAYRWLGLEE 121
>gi|22219465 nudix-type motif 2 [Homo sapiens]
Length = 147
Score = 35.0 bits (79), Expect = 0.087
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 152 DESTRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQ 211
D + + L++Q + + + W P G EP ED +TA+RE EE GI++ +++ ++
Sbjct: 20 DNNAIEFLLLQASDGIHH-WTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKR 78
Query: 212 HTNPGAFG--KSDMYIICRLKPYSFTINFCQEECLRCEWMDLND 253
N A K+ +Y + +K Y I E W+ L +
Sbjct: 79 ELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEH-QAYRWLGLEE 121
>gi|4502125 nudix-type motif 2 [Homo sapiens]
Length = 147
Score = 35.0 bits (79), Expect = 0.087
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 152 DESTRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQ 211
D + + L++Q + + + W P G EP ED +TA+RE EE GI++ +++ ++
Sbjct: 20 DNNAIEFLLLQASDGIHH-WTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKR 78
Query: 212 HTNPGAFG--KSDMYIICRLKPYSFTINFCQEECLRCEWMDLND 253
N A K+ +Y + +K Y I E W+ L +
Sbjct: 79 ELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEH-QAYRWLGLEE 121
>gi|50593112 nudix-type motif 13 [Homo sapiens]
Length = 352
Score = 31.6 bits (70), Expect = 0.96
Identities = 34/145 (23%), Positives = 53/145 (36%), Gaps = 8/145 (5%)
Query: 113 FCFHHAESDSSTLTLWLREGPSRLPGYASHQVGVAGAVFDESTRKILVVQDRNKLKNMWK 172
FC + + R PS Y VA + + TR +L Q K M+
Sbjct: 168 FCSRSGQPTKKNVAGSKRVCPSNNIIYYPQMAPVAITLVSDGTRCLLARQSSFP-KGMYS 226
Query: 173 FPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIICR--LK 230
G + E + +T REV EE G++ E S++ + F + I C +K
Sbjct: 227 ALAGFCDIGESVEETIRREVAEEVGLEVE-----SLQYYASQHWPFPSGSLMIACHATVK 281
Query: 231 PYSFTINFCQEECLRCEWMDLNDLA 255
P I E W +++A
Sbjct: 282 PGQTEIQVNLRELETAAWFSHDEVA 306
>gi|188536065 CD36 antigen [Homo sapiens]
Length = 472
Score = 30.4 bits (67), Expect = 2.1
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 249 MDLNDLAKTENTTPITSRVARLLLYGYREGFDKIDLTVEELPAVYT-GLFYKLYHKELPE 307
M LN L ++ R R LL+GYR+ F L++ P T GLFY Y+
Sbjct: 156 MILNSLINKSKSSMFQVRTLRELLWGYRDPF----LSLVPYPVTTTVGLFYP-YNNTADG 210
Query: 308 NYKTMKGID 316
YK G D
Sbjct: 211 VYKVFNGKD 219
>gi|188536063 CD36 antigen [Homo sapiens]
Length = 472
Score = 30.4 bits (67), Expect = 2.1
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 249 MDLNDLAKTENTTPITSRVARLLLYGYREGFDKIDLTVEELPAVYT-GLFYKLYHKELPE 307
M LN L ++ R R LL+GYR+ F L++ P T GLFY Y+
Sbjct: 156 MILNSLINKSKSSMFQVRTLRELLWGYRDPF----LSLVPYPVTTTVGLFYP-YNNTADG 210
Query: 308 NYKTMKGID 316
YK G D
Sbjct: 211 VYKVFNGKD 219
>gi|48375178 CD36 antigen [Homo sapiens]
Length = 472
Score = 30.4 bits (67), Expect = 2.1
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 249 MDLNDLAKTENTTPITSRVARLLLYGYREGFDKIDLTVEELPAVYT-GLFYKLYHKELPE 307
M LN L ++ R R LL+GYR+ F L++ P T GLFY Y+
Sbjct: 156 MILNSLINKSKSSMFQVRTLRELLWGYRDPF----LSLVPYPVTTTVGLFYP-YNNTADG 210
Query: 308 NYKTMKGID 316
YK G D
Sbjct: 211 VYKVFNGKD 219
>gi|48375176 CD36 antigen [Homo sapiens]
Length = 472
Score = 30.4 bits (67), Expect = 2.1
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 249 MDLNDLAKTENTTPITSRVARLLLYGYREGFDKIDLTVEELPAVYT-GLFYKLYHKELPE 307
M LN L ++ R R LL+GYR+ F L++ P T GLFY Y+
Sbjct: 156 MILNSLINKSKSSMFQVRTLRELLWGYRDPF----LSLVPYPVTTTVGLFYP-YNNTADG 210
Query: 308 NYKTMKGID 316
YK G D
Sbjct: 211 VYKVFNGKD 219
>gi|48375180 CD36 antigen [Homo sapiens]
Length = 472
Score = 30.4 bits (67), Expect = 2.1
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 249 MDLNDLAKTENTTPITSRVARLLLYGYREGFDKIDLTVEELPAVYT-GLFYKLYHKELPE 307
M LN L ++ R R LL+GYR+ F L++ P T GLFY Y+
Sbjct: 156 MILNSLINKSKSSMFQVRTLRELLWGYRDPF----LSLVPYPVTTTVGLFYP-YNNTADG 210
Query: 308 NYKTMKGID 316
YK G D
Sbjct: 211 VYKVFNGKD 219
>gi|31542309 chondroitin sulfate synthase 1 [Homo sapiens]
Length = 802
Score = 30.0 bits (66), Expect = 2.8
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 19 GPGPSAGYRWASGAQGYVRNPPVG-ACDLQGELDRFGGISVRLARLDALDRLDAAAFQKG 77
G PS + + G+ RN G C +G+L R GG V + D F K
Sbjct: 671 GKVPSDNHFAFTQKTGFWRNYGFGITCIYKGDLVRVGGFDVSI---QGWGLEDVDLFNKV 727
Query: 78 LQAAVQQWRSEGRTAVWLHIPI 99
+QA ++ +RS+ V +H P+
Sbjct: 728 VQAGLKTFRSQEVGVVHVHHPV 749
>gi|119120915 rhophilin 1 [Homo sapiens]
Length = 670
Score = 29.3 bits (64), Expect = 4.8
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 11/62 (17%)
Query: 70 DAAAFQ---KGLQAAVQQWRSEGR--------TAVWLHIPILQSRFIAPAASLGFCFHHA 118
D A+++ + L+A Q R+ R TA + + L +RF+ PA SLG FH
Sbjct: 137 DGASYEAEIRELEALRQAMRTPSRNESGLELLTAYYNQLCFLDARFLTPARSLGLFFHWY 196
Query: 119 ES 120
+S
Sbjct: 197 DS 198
>gi|32469515 nudix-type motif 8 [Homo sapiens]
Length = 140
Score = 28.5 bits (62), Expect = 8.2
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 173 FPGGLSEP-EEDIGDTAVREVFEETGI 198
FPGG +P ++D+ TA+RE EE G+
Sbjct: 66 FPGGKCDPADQDVVHTALRETREELGL 92
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.137 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,973,860
Number of Sequences: 37866
Number of extensions: 559820
Number of successful extensions: 1074
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1060
Number of HSP's gapped (non-prelim): 22
length of query: 316
length of database: 18,247,518
effective HSP length: 102
effective length of query: 214
effective length of database: 14,385,186
effective search space: 3078429804
effective search space used: 3078429804
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.