Guide to the Human Genome
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Search of human proteins with 20127553

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|20127553 anaphase-promoting complex subunit 5 isoform a
[Homo sapiens]
         (755 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|20127553 anaphase-promoting complex subunit 5 isoform a [Homo...  1478   0.0  
gi|213385323 anaphase-promoting complex subunit 5 isoform b [Hom...  1254   0.0  
gi|21735569 claspin [Homo sapiens]                                     35   0.34 
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ...    34   0.57 
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]     33   0.75 
gi|130980075 centromere protein J [Homo sapiens]                       33   0.98 
gi|38488692 SH3 domain and tetratricopeptide repeats 2 [Homo sap...    33   0.98 
gi|116089292 tetratricopeptide repeat domain 21B [Homo sapiens]        33   0.98 
gi|51477718 TATA box binding protein-associated factor, RNA poly...    33   1.3  
gi|31317305 M-phase phosphoprotein 10 [Homo sapiens]                   32   1.7  
gi|120431745 huntingtin-associated protein 1 isoform 4 [Homo sap...    32   1.7  
gi|120431738 huntingtin-associated protein 1 isoform 2 [Homo sap...    32   1.7  
gi|110347427 ubiquitin specific protease 34 [Homo sapiens]             32   1.7  
gi|110611919 UDP glucuronosyltransferase 2 family, polypeptide A...    32   2.2  
gi|4758980 pituitary tumor-transforming protein 1 [Homo sapiens]       32   2.8  
gi|148747864 JAW1-related protein isoform a [Homo sapiens]             32   2.8  
gi|154091334 JAW1-related protein isoform c [Homo sapiens]             32   2.8  
gi|154091332 JAW1-related protein isoform b [Homo sapiens]             32   2.8  
gi|148728182 JAW1-related protein isoform b [Homo sapiens]             32   2.8  
gi|217416374 hypothetical protein LOC92749 [Homo sapiens]              32   2.8  
gi|21735548 centrosomal protein 2 [Homo sapiens]                       31   3.7  
gi|62899047 RAD50 interactor 1 [Homo sapiens]                          31   3.7  
gi|83035129 coiled-coil domain containing 108 isoform 1 [Homo sa...    31   3.7  
gi|11034845 Regulation of nuclear pre-mRNA domain containing 1B ...    31   4.9  
gi|7656849 acyl-Coenzyme A dehydrogenase family, member 8 [Homo ...    31   4.9  
gi|226693318 adenosine deaminase-like isoform 1 [Homo sapiens]         30   6.3  
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap...    30   6.3  
gi|21359945 chromosome condensation protein G [Homo sapiens]           30   6.3  
gi|68077164 Yeast Sps1/Ste20-related kinase 4 isoform 1 [Homo sa...    30   6.3  
gi|221139761 zinc finger protein 853 [Homo sapiens]                    30   8.3  

>gi|20127553 anaphase-promoting complex subunit 5 isoform a [Homo
           sapiens]
          Length = 755

 Score = 1478 bits (3827), Expect = 0.0
 Identities = 755/755 (100%), Positives = 755/755 (100%)

Query: 1   MASVHESLYFNPMMTNGVVHANVFGIKDWVTPYKIAVLVLLNEMSRTGEGAVSLMERRRL 60
           MASVHESLYFNPMMTNGVVHANVFGIKDWVTPYKIAVLVLLNEMSRTGEGAVSLMERRRL
Sbjct: 1   MASVHESLYFNPMMTNGVVHANVFGIKDWVTPYKIAVLVLLNEMSRTGEGAVSLMERRRL 60

Query: 61  NQLLLPLLQGPDITLSKLYKLIEESCPQLANSVQIRIKLMAEGELKDMEQFFDDLSDSFS 120
           NQLLLPLLQGPDITLSKLYKLIEESCPQLANSVQIRIKLMAEGELKDMEQFFDDLSDSFS
Sbjct: 61  NQLLLPLLQGPDITLSKLYKLIEESCPQLANSVQIRIKLMAEGELKDMEQFFDDLSDSFS 120

Query: 121 GTEPEVHKTSVVGLFLRHMILAYSKLSFSQVFKLYTALQQYFQNGEKKTVEDADMELTSR 180
           GTEPEVHKTSVVGLFLRHMILAYSKLSFSQVFKLYTALQQYFQNGEKKTVEDADMELTSR
Sbjct: 121 GTEPEVHKTSVVGLFLRHMILAYSKLSFSQVFKLYTALQQYFQNGEKKTVEDADMELTSR 180

Query: 181 DEGERKMEKEELDVSVREEEVSCSGPLSQKQAEFFLSQQASLLKNDETKALTPASLQKEL 240
           DEGERKMEKEELDVSVREEEVSCSGPLSQKQAEFFLSQQASLLKNDETKALTPASLQKEL
Sbjct: 181 DEGERKMEKEELDVSVREEEVSCSGPLSQKQAEFFLSQQASLLKNDETKALTPASLQKEL 240

Query: 241 NNLLKFNPDFAEAHYLSYLNNLRVQDVFSSTHSLLHYFDRLILTGAESKSNGEEGYGRSL 300
           NNLLKFNPDFAEAHYLSYLNNLRVQDVFSSTHSLLHYFDRLILTGAESKSNGEEGYGRSL
Sbjct: 241 NNLLKFNPDFAEAHYLSYLNNLRVQDVFSSTHSLLHYFDRLILTGAESKSNGEEGYGRSL 300

Query: 301 RYAALNLAALHCRFGHYQQAELALQEAIRIAQESNDHVCLQHCLSWLYVLGQKRSDSYVL 360
           RYAALNLAALHCRFGHYQQAELALQEAIRIAQESNDHVCLQHCLSWLYVLGQKRSDSYVL
Sbjct: 301 RYAALNLAALHCRFGHYQQAELALQEAIRIAQESNDHVCLQHCLSWLYVLGQKRSDSYVL 360

Query: 361 LEHSVKKAVHFGLPYLASLGIQSLVQQRAFAGKTANKLMDALKDSDLLHWKHSLSELIDI 420
           LEHSVKKAVHFGLPYLASLGIQSLVQQRAFAGKTANKLMDALKDSDLLHWKHSLSELIDI
Sbjct: 361 LEHSVKKAVHFGLPYLASLGIQSLVQQRAFAGKTANKLMDALKDSDLLHWKHSLSELIDI 420

Query: 421 SIAQKTAIWRLYGRSTMALQQAQMLLSMNSLEAVNAGVQQNNTESFAVALCHLAELHAEQ 480
           SIAQKTAIWRLYGRSTMALQQAQMLLSMNSLEAVNAGVQQNNTESFAVALCHLAELHAEQ
Sbjct: 421 SIAQKTAIWRLYGRSTMALQQAQMLLSMNSLEAVNAGVQQNNTESFAVALCHLAELHAEQ 480

Query: 481 GCFAAASEVLKHLKERFPPNSQHAQLWMLCDQKIQFDRAMNDGKYHLADSLVTGITALNS 540
           GCFAAASEVLKHLKERFPPNSQHAQLWMLCDQKIQFDRAMNDGKYHLADSLVTGITALNS
Sbjct: 481 GCFAAASEVLKHLKERFPPNSQHAQLWMLCDQKIQFDRAMNDGKYHLADSLVTGITALNS 540

Query: 541 IEGVYRKAVVLQAQNQMSEAHKLLQKLLVHCQKLKNTEMVISVLLSVAELYWRSSSPTIA 600
           IEGVYRKAVVLQAQNQMSEAHKLLQKLLVHCQKLKNTEMVISVLLSVAELYWRSSSPTIA
Sbjct: 541 IEGVYRKAVVLQAQNQMSEAHKLLQKLLVHCQKLKNTEMVISVLLSVAELYWRSSSPTIA 600

Query: 601 LPMLLQALALSKEYRLQYLASETVLNLAFAQLILGIPEQALSLLHMAIEPILADGAILDK 660
           LPMLLQALALSKEYRLQYLASETVLNLAFAQLILGIPEQALSLLHMAIEPILADGAILDK
Sbjct: 601 LPMLLQALALSKEYRLQYLASETVLNLAFAQLILGIPEQALSLLHMAIEPILADGAILDK 660

Query: 661 GRAMFLVAKCQVASAASYDQPKKAEALEAAIENLNEAKNYFAKVDCKERIRDVVYFQARL 720
           GRAMFLVAKCQVASAASYDQPKKAEALEAAIENLNEAKNYFAKVDCKERIRDVVYFQARL
Sbjct: 661 GRAMFLVAKCQVASAASYDQPKKAEALEAAIENLNEAKNYFAKVDCKERIRDVVYFQARL 720

Query: 721 YHTLGKTQERNRCAMLFRQLHQELPSHGVPLINHL 755
           YHTLGKTQERNRCAMLFRQLHQELPSHGVPLINHL
Sbjct: 721 YHTLGKTQERNRCAMLFRQLHQELPSHGVPLINHL 755


>gi|213385323 anaphase-promoting complex subunit 5 isoform b [Homo
           sapiens]
          Length = 643

 Score = 1254 bits (3244), Expect = 0.0
 Identities = 643/656 (98%), Positives = 643/656 (98%), Gaps = 13/656 (1%)

Query: 100 MAEGELKDMEQFFDDLSDSFSGTEPEVHKTSVVGLFLRHMILAYSKLSFSQVFKLYTALQ 159
           MAEGELKDMEQFFDDLSDSFSGTEPEVHKTSVVGLFLRHMILAYSKLSFSQVFKLYTALQ
Sbjct: 1   MAEGELKDMEQFFDDLSDSFSGTEPEVHKTSVVGLFLRHMILAYSKLSFSQVFKLYTALQ 60

Query: 160 QYFQNGEKKTVEDADMELTSRDEGERKMEKEELDVSVREEEVSCSGPLSQKQAEFFLSQQ 219
           QYFQNGEKKTVEDADMELTSRDEGERKMEKEELDVSVREEEVSCSGPLSQKQAEFFLSQQ
Sbjct: 61  QYFQNGEKKTVEDADMELTSRDEGERKMEKEELDVSVREEEVSCSGPLSQKQAEFFLSQQ 120

Query: 220 ASLLKNDETKALTPASLQKELNNLLKFNPDFAEAHYLSYLNNLRVQDVFSSTHSLLHYFD 279
           ASLLKNDETKALTPASLQKELNNLLKFNPDFAEAHYLSYLNNLRVQDVFSSTHSLLHYFD
Sbjct: 121 ASLLKNDETKALTPASLQKELNNLLKFNPDFAEAHYLSYLNNLRVQDVFSSTHSLLHYFD 180

Query: 280 RLILTGAESKSNGEEGYGRSLRYAALNLAALHCRFGHYQQAELALQEAIRIAQESNDHVC 339
           RLILTGAESKSNGEEGYGRSLRYAALNLAALHCRFGHYQQAELALQEAIRIAQESNDHVC
Sbjct: 181 RLILTGAESKSNGEEGYGRSLRYAALNLAALHCRFGHYQQAELALQEAIRIAQESNDHVC 240

Query: 340 LQHCLSWLYVLGQKRSDSYVLLEHSVKKAVHFGLPYLASLGIQSLVQQRAFAGKTANKLM 399
           LQHCLSWLYVLGQKRSDSYVLLEHSVKKAVHFGLP             RAFAGKTANKLM
Sbjct: 241 LQHCLSWLYVLGQKRSDSYVLLEHSVKKAVHFGLP-------------RAFAGKTANKLM 287

Query: 400 DALKDSDLLHWKHSLSELIDISIAQKTAIWRLYGRSTMALQQAQMLLSMNSLEAVNAGVQ 459
           DALKDSDLLHWKHSLSELIDISIAQKTAIWRLYGRSTMALQQAQMLLSMNSLEAVNAGVQ
Sbjct: 288 DALKDSDLLHWKHSLSELIDISIAQKTAIWRLYGRSTMALQQAQMLLSMNSLEAVNAGVQ 347

Query: 460 QNNTESFAVALCHLAELHAEQGCFAAASEVLKHLKERFPPNSQHAQLWMLCDQKIQFDRA 519
           QNNTESFAVALCHLAELHAEQGCFAAASEVLKHLKERFPPNSQHAQLWMLCDQKIQFDRA
Sbjct: 348 QNNTESFAVALCHLAELHAEQGCFAAASEVLKHLKERFPPNSQHAQLWMLCDQKIQFDRA 407

Query: 520 MNDGKYHLADSLVTGITALNSIEGVYRKAVVLQAQNQMSEAHKLLQKLLVHCQKLKNTEM 579
           MNDGKYHLADSLVTGITALNSIEGVYRKAVVLQAQNQMSEAHKLLQKLLVHCQKLKNTEM
Sbjct: 408 MNDGKYHLADSLVTGITALNSIEGVYRKAVVLQAQNQMSEAHKLLQKLLVHCQKLKNTEM 467

Query: 580 VISVLLSVAELYWRSSSPTIALPMLLQALALSKEYRLQYLASETVLNLAFAQLILGIPEQ 639
           VISVLLSVAELYWRSSSPTIALPMLLQALALSKEYRLQYLASETVLNLAFAQLILGIPEQ
Sbjct: 468 VISVLLSVAELYWRSSSPTIALPMLLQALALSKEYRLQYLASETVLNLAFAQLILGIPEQ 527

Query: 640 ALSLLHMAIEPILADGAILDKGRAMFLVAKCQVASAASYDQPKKAEALEAAIENLNEAKN 699
           ALSLLHMAIEPILADGAILDKGRAMFLVAKCQVASAASYDQPKKAEALEAAIENLNEAKN
Sbjct: 528 ALSLLHMAIEPILADGAILDKGRAMFLVAKCQVASAASYDQPKKAEALEAAIENLNEAKN 587

Query: 700 YFAKVDCKERIRDVVYFQARLYHTLGKTQERNRCAMLFRQLHQELPSHGVPLINHL 755
           YFAKVDCKERIRDVVYFQARLYHTLGKTQERNRCAMLFRQLHQELPSHGVPLINHL
Sbjct: 588 YFAKVDCKERIRDVVYFQARLYHTLGKTQERNRCAMLFRQLHQELPSHGVPLINHL 643


>gi|21735569 claspin [Homo sapiens]
          Length = 1339

 Score = 34.7 bits (78), Expect = 0.34
 Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 21/139 (15%)

Query: 166 EKKTVEDADMELTSRDEGERKMEKEELDVSVREEEVSCSGPL---SQKQAEFFLSQQASL 222
           E++  E+ +M   S ++GE K+EKEE +  + EEE          +Q+ AEF LS +   
Sbjct: 629 EEEEEEEEEMTDESEEDGEEKVEKEEKEEELEEEEEKEEEEEEEGNQETAEFLLSSEEIE 688

Query: 223 LKNDETKALTPASLQKELNNLLKFNPDFAEAHYLSYLNNLRVQDVFSSTHSLLHYFDRLI 282
            K+++        + KE N+          +     +  L V    SS  +LL + D   
Sbjct: 689 TKDEK-------EMDKENND--------GSSEIGKAVGFLSVPKSLSSDSTLLLFKDSSS 733

Query: 283 LTG---AESKSNGEEGYGR 298
             G    E KS  +E  G+
Sbjct: 734 KMGYFPTEEKSETDENSGK 752


>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin
           (with transmembrane signal), 1 [Homo sapiens]
          Length = 3259

 Score = 33.9 bits (76), Expect = 0.57
 Identities = 97/540 (17%), Positives = 202/540 (37%), Gaps = 65/540 (12%)

Query: 64  LLPLLQGPDITLSKLYKLIEESCPQLANSVQIRIKLMAEGELKDMEQFFDDLS---DSFS 120
           L  +++  D+ L +  + ++E      N ++ ++KL A+ +L  + ++ +++     +  
Sbjct: 64  LKDIIRQKDVQLQQKDEALQEERKAADNKIK-KLKLHAKAKLTSLNKYIEEMKAQGGTVL 122

Query: 121 GTEPEVH-------KTSVVGLFLRHMILAYSKLSFSQVFKLYTALQQYFQNGEKKTVEDA 173
            TEP+         K+S        M +   K    +  +L + LQ      + +    +
Sbjct: 123 PTEPQSEEQLSKHDKSSTE----EEMEIEKIKHKLQEKEELISTLQAQLTQAQAEQPAQS 178

Query: 174 DMELTSRDEGERKMEKEELDVSVREEEVS-------CSGPLSQKQAEFFLSQQASLLKND 226
             E+      +++++++E  +S  + ++S           + +K A F    Q  L +++
Sbjct: 179 STEMEEFVMMKQQLQEKEEFISTLQAQLSQTQAEQAAQQVVREKDARF--ETQVRLHEDE 236

Query: 227 ETKALTPASLQKELNNLLKFNPDFAEAHYLSYLNNLRVQDVFSSTHSLLHYFDRLILTGA 286
             + +T A ++ E+   L+      E H  S +   +V D+     +     ++++    
Sbjct: 237 LLQLVTQADVETEMQQKLRVLQRKLEEHEESLVGRAQVVDLLQQELTAAEQRNQILSQQL 296

Query: 287 ESKSNGEEGYGRSLRYAALNLAALHCRFGHYQQAELALQEAIRIAQESNDHVCLQHCLSW 346
           +      E    +LR    N              ++ L+ A R     N    + H L  
Sbjct: 297 QQM----EAEHNTLR----NTVETEREESKILLEKMELEVAERKLSFHNLQEEMHHLLEQ 348

Query: 347 LYVLGQKRSD---SYVLLEHSVKKAVHFGLPYLASLGIQSLVQQRAFAGKTANKLMDALK 403
               GQ +++    Y  LE   K  +     ++ SL            G+      DALK
Sbjct: 349 FEQAGQAQAELESRYSALEQKHKAEMEEKTSHILSL---------QKTGQELQSACDALK 399

Query: 404 D--SDLLHWKH--------SLSELIDISIAQKTAIWRLYGRSTMALQQAQMLLSMNSLEA 453
           D  S LL  K+        ++ +L D    +   I +   R  + LQQ +     +  + 
Sbjct: 400 DQNSKLLQDKNEQAVQSAQTIQQLEDQLQQKSKEISQFLNR--LPLQQHETASQTSFPDV 457

Query: 454 VNAGVQQNNTESFAVALCHLAELHAEQGCFAAASEVLKHLKERFPPNSQHAQLWMLCDQK 513
            N G Q    E+ A     + EL  E+G    +S  L+ LK      S    L    ++ 
Sbjct: 458 YNEGTQAVTEENIASLQKRVVELENEKGALLLSSIELEELKAENEKLSSQITLLEAQNRT 517

Query: 514 IQFDRAMNDGKYHLADSLVTGITALNSIEGVYRKAVVLQAQNQMSEAHKLLQKLLVHCQK 573
            + DR +++         ++ +   N       ++     +N  S+ HK L  LL+  ++
Sbjct: 518 GEADREVSE---------ISIVDIANKRSSSAEESGQDVLENTFSQKHKELSVLLLEMKE 568



 Score = 30.0 bits (66), Expect = 8.3
 Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 17/148 (11%)

Query: 102  EGELKDMEQFFDDLSDSFSGTEPEVHKTSVVGLFLRHMILAYSKLSFSQVFKLYTALQQ- 160
            E +LK+ E+  +DL  SF+  + E    S          +   K+S SQ+ +  TALQ+ 
Sbjct: 2573 EEKLKESEEANEDLRRSFNALQEEKQDLS--------KEIESLKVSISQLTRQVTALQEE 2624

Query: 161  -----YFQNGEKKTVEDADMELTSRDEGERKMEKEELDVSVREEEVSCSGPLSQKQAEFF 215
                 Y    + K  E   +        +R  E EE  V V++E     G +  K  +  
Sbjct: 2625 GTLGLYHAQLKVKEEEVHRLSALFSSSQKRIAELEEELVCVQKEAAKKVGEIEDKLKKEL 2684

Query: 216  --LSQQASLLKND-ETKALTPASLQKEL 240
              L   A +++N+ ET     A L ++L
Sbjct: 2685 KHLHHDAGIMRNETETAEERVAELARDL 2712


>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
          Length = 2230

 Score = 33.5 bits (75), Expect = 0.75
 Identities = 39/174 (22%), Positives = 77/174 (44%), Gaps = 28/174 (16%)

Query: 76   SKLYKLIEESCPQLANSVQIRIKLMAEGELKDMEQFFDDLSDSFSGTEPEVHKTSVVGLF 135
            +K  +L+EE+  + + S  ++ KL     L +ME   +DL    +G E E  K       
Sbjct: 1894 NKPTELLEENTEEKSKSHLVQPKL-----LSNMEAQHNDLEFKLAGAEREKQKLG----- 1943

Query: 136  LRHMILAYSKLSFSQVFKLYTALQQYFQNGEKKTVEDADMELTSRDEGERKMEKEELDV- 194
                          ++ +L   L+   +   ++ +E    E     E + K E+E+L++ 
Sbjct: 1944 -------------KEIVRLQKDLRM-LRKEHQQELEILKKEYDQEREEKIKQEQEDLELK 1989

Query: 195  ---SVREEEVSCSGPLSQKQAEFFLSQQASLLKNDETKALTPASLQKELNNLLK 245
               ++++     +  L+QK+ E  ++ + ++ K  E +A    S Q+E N LLK
Sbjct: 1990 HNSTLKQLMREFNTQLAQKEQELEMTIKETINKAQEVEAELLESHQEETNQLLK 2043


>gi|130980075 centromere protein J [Homo sapiens]
          Length = 1338

 Score = 33.1 bits (74), Expect = 0.98
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 13/93 (13%)

Query: 155 YTALQQYFQNG-EKKTVEDADMELTSRDEGERKMEKEELD--VSVREEEVSCSGPLSQKQ 211
           +T  +  FQ G E K V +   + TS D+   KM++++L    +++ +E+    P+ +K 
Sbjct: 385 FTNAKSKFQKGKESKLVTN---QSTSEDQPLFKMDRQQLQRKTALKNKELCADNPILKKD 441

Query: 212 AE-------FFLSQQASLLKNDETKALTPASLQ 237
           ++         LSQ+  +LK    K+L+P+ L+
Sbjct: 442 SKARTKSGSVTLSQKPKMLKCSNRKSLSPSGLK 474


>gi|38488692 SH3 domain and tetratricopeptide repeats 2 [Homo
           sapiens]
          Length = 1288

 Score = 33.1 bits (74), Expect = 0.98
 Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 5/90 (5%)

Query: 563 LLQKLLVHCQKLKNTEMVISVLLSVAELYWRSSSPTIALPMLLQALALSKEYRLQYLASE 622
           +L++ L  C++L +     ++ L ++++Y    SP  A+  L QAL L +    Q  + E
Sbjct: 739 MLRQALAACEELADRSTQRALCLILSKVYLEHRSPDGAIHYLSQALVLGQLLGEQE-SFE 797

Query: 623 TVLNLAFAQLILGIPEQALSLLHMAIEPIL 652
           + L LA+A L+    ++AL +L    EP+L
Sbjct: 798 SSLCLAWAYLLASQAKKALDVL----EPLL 823


>gi|116089292 tetratricopeptide repeat domain 21B [Homo sapiens]
          Length = 1316

 Score = 33.1 bits (74), Expect = 0.98
 Identities = 161/710 (22%), Positives = 258/710 (36%), Gaps = 170/710 (23%)

Query: 81  LIEESCPQLANSVQIRIKLMAEGELKDMEQFFDDLSDSFSGTEPEVHKTSVVGLFLRHMI 140
           L+++S    A  +Q    +  EG+++      ++L ++    EP+  +         ++ 
Sbjct: 239 LLQDSQNVEALRMQALYYVCREGDIEKASTKLENLGNTLDAMEPQNAQ------LFYNIT 292

Query: 141 LAYSKL-SFSQVF--KLYTALQQYF----QNGEKKTVEDADMELTSRDEGERKMEK---- 189
           LA+S+    SQ+   K+ T L++ F    Q  E  T     M L  R +   K  K    
Sbjct: 293 LAFSRTCGRSQLILQKIQTLLERAFSLNPQQSEFATELGYQMILQGRVKEALKWYKTAMT 352

Query: 190 -EELDVSVREEEVSCS---GPL--SQKQAEFFLSQQASLLKNDE------TKALTPASLQ 237
            +E  VS     + C    G L  + +Q EF    Q S+ K+ E        A+     Q
Sbjct: 353 LDETSVSALVGFIQCQLIEGQLQDADQQLEFLNEIQQSIGKSAELIYLHAVLAMKKNKRQ 412

Query: 238 KELNNLL----------------------KFNPDFAEAHYLSYLNNLRVQDVFSSTHSLL 275
           +E+ NLL                      K NPDF     + YL+   +Q   +S    L
Sbjct: 413 EEVINLLNDVLDTHFSQLEGLPLGIQYFEKLNPDFLLEIVMEYLSFCPMQP--ASPGQPL 470

Query: 276 HYFDRLILTGAESKSNGEEGYGRSL------RYAALNLAALHCRFGH-------YQQAEL 322
               R  ++  E+      G  +++      +Y + ++ A      H       Y  A L
Sbjct: 471 CPLLRRCISVLETVVRTVPGLLQTVFLIAKVKYLSGDIEAAFNNLQHCLEHNPSYADAHL 530

Query: 323 AL------QEAIRIAQESNDHVCLQHCLSW--------LYVLGQKRSDSYVLLEHSVKKA 368
            L      QE +++  +S     L+ CLS+        LY L + +S   +       K 
Sbjct: 531 LLAQVYLSQEKVKLCSQS-----LELCLSYDFKVRDYPLYHLIKAQSQKKMGEIADAIKT 585

Query: 369 VHFGLPYLASLGIQSLVQQRAFAGKTANKLMDALKDSDLLHWKHSLSELIDISIAQKTAI 428
           +H  +         SL   +     T +K  D   + D  H      ELID+        
Sbjct: 586 LHMAM---------SLPGMKRIGASTKSK--DRKTEVDTSHRLSIFLELIDVH------- 627

Query: 429 WRLYGR---STMALQQAQMLLSMNSLEA------VNAGVQQNNTESFAVALCHLAELHAE 479
            RL G    +T  LQ A    S  S E        +  + Q + E    AL  L  + AE
Sbjct: 628 -RLNGEQHEATKVLQDAIHEFSGTSEEVRVTIANADLALAQGDIER---ALSILQNVTAE 683

Query: 480 QGCFAAASE-----VLKHLKERFPPNSQHAQLWMLCDQKIQFDRAMNDGKYHLADSLVTG 534
           Q  F  A E      LKH K++         L++ C ++I  +R  N   +     L+ G
Sbjct: 684 QPYFIEAREKMADIYLKHRKDKM--------LYITCFREIA-ERMANPRSF-----LLLG 729

Query: 535 ITALNSIEGVYRKAVVLQAQNQMSEAHKLLQKLLVHCQKLKNTEMVISVLLSVAELYWRS 594
              +N +E         QA NQ  +   L  K+     K  N  M I+        Y+ +
Sbjct: 730 DAYMNILEPEEAIVAYEQALNQNPKDGTLASKMGKALIKTHNYSMAIT--------YYEA 781

Query: 595 SSPTIALPMLLQALALSKEYRLQYLASETVLNLAFAQLILGIPEQALSLLHMAIEPILAD 654
                       AL   ++  L Y  +E +L L +      + + AL     A EP+   
Sbjct: 782 ------------ALKTGQKNYLCYDLAELLLKLKWYDKAEKVLQHAL-----AHEPVNEL 824

Query: 655 GAILDKGRAMFLVAKCQVASAASYDQPKKAEALEAAIENLNEAKNYFAKV 704
            A+++ GR   L+AK             K E L  AI  L +A+   A+V
Sbjct: 825 SALMEDGRCQVLLAKVY----------SKMEKLGDAITALQQARELQARV 864


>gi|51477718 TATA box binding protein-associated factor, RNA
           polymerase II, Q [Homo sapiens]
          Length = 462

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 33/154 (21%), Positives = 63/154 (40%), Gaps = 14/154 (9%)

Query: 87  PQLANSVQIRIKLMAEGELKDMEQFFDDLSDSFSGTEPEVHKTSVVGLFLRHMILAYSKL 146
           P + N V+  ++  AE      E   +D      GT+    + S+ G  +   + ++ + 
Sbjct: 259 PDVENEVKRLLRSDAEAVSTRWEVIAED------GTKEIESQGSIPGFLISSGMSSHKQG 312

Query: 147 SFSQVFKLYTALQQYFQNGEKKTVEDADMELTSRDEGERKMEKEELDVSVREEEVSCSGP 206
             S     Y  L++ F +      +D D +    DE E + E E+ D    EEE  CS  
Sbjct: 313 HTSSE---YDMLREMFSDSRSNNDDDEDED----DEDEDEDEDEDEDEDKEEEEEDCSEE 365

Query: 207 LSQKQAEFFLSQQASLLKNDETKALTPASLQKEL 240
             ++Q +    +      N+ T ++    +QK++
Sbjct: 366 YLERQLQAEFIESGQYRANEGTSSIV-MEIQKQI 398


>gi|31317305 M-phase phosphoprotein 10 [Homo sapiens]
          Length = 681

 Score = 32.3 bits (72), Expect = 1.7
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 10/55 (18%)

Query: 160 QYFQNGEKKTVEDADMELTSRDEGERKME---------KEELDVSVREEEVSCSG 205
           QYFQN   +T+ D D+ L    E + + E         KE+L+  + EEEVS  G
Sbjct: 89  QYFQNAVSETINDEDISLLPESEEQEREEDGSEIEADDKEDLE-DLEEEEVSDMG 142


>gi|120431745 huntingtin-associated protein 1 isoform 4 [Homo
           sapiens]
          Length = 594

 Score = 32.3 bits (72), Expect = 1.7
 Identities = 47/177 (26%), Positives = 72/177 (40%), Gaps = 34/177 (19%)

Query: 58  RRLNQLLLPLLQGPDITLSK-----LYKLIEESCPQLANSVQIRIKLMAEGELKDMEQFF 112
           R L + L P L  P   +++     +  L+EE  P +  SV   + L  E +L    +  
Sbjct: 152 RELEEALCPNLPPPVKKITQEDVKVMLYLLEELLPPVWESVTYGMVLQRERDLNTAARIG 211

Query: 113 DDLSDSFSGTEPEVHKT-SVVG------LFLRHMILAYSKLSFSQVFKLYTALQQYFQNG 165
             L    S    E  K  +++G      L+LRH +    +L           LQ Y  + 
Sbjct: 212 QSLVKQNSVLMEENSKLEALLGSAKEEILYLRHQVNLRDEL-----------LQLYSDSD 260

Query: 166 EKKTVEDADMELTSRDEGERKMEKEELDVSVREEEVSCSGPLSQKQAEFFLSQQASL 222
           E    ED D E    +E E K  +EE +    EE++ C+ P     A   +SQ+A L
Sbjct: 261 E----EDEDEE----EEEEEKEAEEEQEEEEAEEDLQCAHPC---DAPKLISQEALL 306


>gi|120431738 huntingtin-associated protein 1 isoform 2 [Homo
           sapiens]
          Length = 619

 Score = 32.3 bits (72), Expect = 1.7
 Identities = 47/177 (26%), Positives = 72/177 (40%), Gaps = 34/177 (19%)

Query: 58  RRLNQLLLPLLQGPDITLSK-----LYKLIEESCPQLANSVQIRIKLMAEGELKDMEQFF 112
           R L + L P L  P   +++     +  L+EE  P +  SV   + L  E +L    +  
Sbjct: 152 RELEEALCPNLPPPVKKITQEDVKVMLYLLEELLPPVWESVTYGMVLQRERDLNTAARIG 211

Query: 113 DDLSDSFSGTEPEVHKT-SVVG------LFLRHMILAYSKLSFSQVFKLYTALQQYFQNG 165
             L    S    E  K  +++G      L+LRH +    +L           LQ Y  + 
Sbjct: 212 QSLVKQNSVLMEENSKLEALLGSAKEEILYLRHQVNLRDEL-----------LQLYSDSD 260

Query: 166 EKKTVEDADMELTSRDEGERKMEKEELDVSVREEEVSCSGPLSQKQAEFFLSQQASL 222
           E    ED D E    +E E K  +EE +    EE++ C+ P     A   +SQ+A L
Sbjct: 261 E----EDEDEE----EEEEEKEAEEEQEEEEAEEDLQCAHPC---DAPKLISQEALL 306


>gi|110347427 ubiquitin specific protease 34 [Homo sapiens]
          Length = 3546

 Score = 32.3 bits (72), Expect = 1.7
 Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 6/105 (5%)

Query: 103  GELKDMEQFFDDLSDSFSGTEPEVHKT--SVVGLFLRHMILAYSKLSFSQVFKLYTALQQ 160
            GE KDM +FF DL        PE+  T  S+ G  + + +++      SQ  + +  ++ 
Sbjct: 1974 GEQKDMTEFFTDLITKIEEMSPELKNTVKSLFGGVITNNVVSLDCEHVSQTAEEFYTVR- 2032

Query: 161  YFQNGEKKTVEDADMELTSRD--EGERKMEKEELDVSVREEEVSC 203
              Q  + K + ++  E+T +D  EG+           VR E+ +C
Sbjct: 2033 -CQVADMKNIYESLDEVTIKDTLEGDNMYTCSHCGKKVRAEKRAC 2076


>gi|110611919 UDP glucuronosyltransferase 2 family, polypeptide A1
           [Homo sapiens]
          Length = 527

 Score = 32.0 bits (71), Expect = 2.2
 Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 3/68 (4%)

Query: 483 FAAASEVLKHL-KERFPPNSQHAQLWMLCDQKIQFDRAMNDGKYHLADSLVTGITALNSI 541
           F+ AS V KH  K  +PP+   A L  L DQ    DR  N   YHL D +    T   S 
Sbjct: 173 FSPASTVEKHCGKVPYPPSYVPAVLSELTDQMSFTDRIRNFISYHLQDYMFE--TLWKSW 230

Query: 542 EGVYRKAV 549
           +  Y KA+
Sbjct: 231 DSYYSKAL 238


>gi|4758980 pituitary tumor-transforming protein 1 [Homo sapiens]
          Length = 202

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 10/70 (14%)

Query: 198 EEEVSCSGPLSQKQAEFFLSQQASLLKNDETKALTPAS--LQKELNNLLKFNP------D 249
           E+ V   GPL QKQ  F  S +    K  + K+  PAS     E+     FNP      D
Sbjct: 72  EKSVKTKGPLKQKQPSF--SAKKMTEKTVKAKSSVPASDDAYPEIEKFFPFNPLDFESFD 129

Query: 250 FAEAHYLSYL 259
             E H +++L
Sbjct: 130 LPEEHQIAHL 139


>gi|148747864 JAW1-related protein isoform a [Homo sapiens]
          Length = 903

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 3/57 (5%)

Query: 157 ALQQYFQNGEKKTVEDADMELTSRDEGERKMEKEELDVSVREEEVSCSGPLSQKQAE 213
           A  + FQ G KKT E  D++    +E E+K E  E    V E E    GP S K  E
Sbjct: 774 AYSKGFQEGLKKTKELQDLK---EEEEEQKSESPEEPEEVEETEEEEKGPRSSKLEE 827


>gi|154091334 JAW1-related protein isoform c [Homo sapiens]
          Length = 597

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 3/57 (5%)

Query: 157 ALQQYFQNGEKKTVEDADMELTSRDEGERKMEKEELDVSVREEEVSCSGPLSQKQAE 213
           A  + FQ G KKT E  D++    +E E+K E  E    V E E    GP S K  E
Sbjct: 468 AYSKGFQEGLKKTKELQDLK---EEEEEQKSESPEEPEEVEETEEEEKGPRSSKLEE 521


>gi|154091332 JAW1-related protein isoform b [Homo sapiens]
          Length = 821

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 3/57 (5%)

Query: 157 ALQQYFQNGEKKTVEDADMELTSRDEGERKMEKEELDVSVREEEVSCSGPLSQKQAE 213
           A  + FQ G KKT E  D++    +E E+K E  E    V E E    GP S K  E
Sbjct: 692 AYSKGFQEGLKKTKELQDLK---EEEEEQKSESPEEPEEVEETEEEEKGPRSSKLEE 745


>gi|148728182 JAW1-related protein isoform b [Homo sapiens]
          Length = 821

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 3/57 (5%)

Query: 157 ALQQYFQNGEKKTVEDADMELTSRDEGERKMEKEELDVSVREEEVSCSGPLSQKQAE 213
           A  + FQ G KKT E  D++    +E E+K E  E    V E E    GP S K  E
Sbjct: 692 AYSKGFQEGLKKTKELQDLK---EEEEEQKSESPEEPEEVEETEEEEKGPRSSKLEE 745


>gi|217416374 hypothetical protein LOC92749 [Homo sapiens]
          Length = 740

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 166 EKKTVEDADMELTSR-DEGERKMEKEELDVSVREEEVSCSGPLSQKQAEFFLSQQASLLK 224
           E KT +D   E+TS+ +EG++K   +EL   +  +++ C+G L  K       QQ    K
Sbjct: 126 EVKTSQDKFDEITSKWEEGKQKRIPQELWEMLNTQQLHCAGLLEDKNKLISELQQELKTK 185

Query: 225 NDE 227
           +D+
Sbjct: 186 DDQ 188


>gi|21735548 centrosomal protein 2 [Homo sapiens]
          Length = 2442

 Score = 31.2 bits (69), Expect = 3.7
 Identities = 108/511 (21%), Positives = 190/511 (37%), Gaps = 73/511 (14%)

Query: 167  KKTVEDADMELTSRDEGERKMEKE------------ELDVSVREEEVSCSGPLSQKQAEF 214
            +K VED   +L ++D+ +R +E+E             +   +  E+ S +  L +K+   
Sbjct: 1009 QKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRL 1068

Query: 215  FLSQQASLLKNDETKAL-----TPASLQKELN---NLLKFNPDFAEAHYLSYLNNLRVQD 266
             + Q+A  ++  E  AL          QKEL+    LL+      EA +L+     ++ +
Sbjct: 1069 LVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLA--QEAQLLE 1126

Query: 267  VFSSTHSLLHYFDRLILTGAESKSNGEEGYGRSLRYAALNLAALHCRFGHYQQAELALQE 326
               ++H +     R  L   E+K+   +   RS   + L   A   + G+  QA+  L  
Sbjct: 1127 ELEASH-ITEQQLRASLWAQEAKAAQLQLRLRSTE-SQLEALAAEQQPGNQAQAQAQLAS 1184

Query: 327  AIRIAQESNDHVCLQHCLSWLYVLGQKRSDSYVL-LEHSVKKAVHFGLPYLASLGIQSLV 385
                 Q++   VC       L   G      + L  + +  +++    P L +L  +++ 
Sbjct: 1185 LYSALQQALGSVC--ESRPELSGGGDSAPSVWGLEPDQNGARSLFKRGPLLTALSAEAVA 1242

Query: 386  QQRAFAGKTANKLMDALKDSDLLHWK-HSLSELIDISIAQKTAIWRLYGRSTMALQQAQM 444
               +   K    L    +  D+L  +   L E +  + A+K+ +          LQ  Q 
Sbjct: 1243 ---SALHKLHQDLWKTQQTRDVLRDQVQKLEERLTDTEAEKSQV-------HTELQDLQR 1292

Query: 445  LLSMNSLEAVNAGVQQNNTESFAVALCHLAELHAEQGCFAA--------------ASEVL 490
             LS N  E      +QN+ ES       L ELH       +                E+L
Sbjct: 1293 QLSQNQEEKSKWEGKQNSLES------ELMELHETMASLQSRLRRAELQRMEAQGERELL 1346

Query: 491  KHLKERFPPNSQHAQLWMLCDQKIQFDRAMNDGKYHLADSLVTGITAL----NSIEGVYR 546
            +  KE      +H Q        +   RA       L + L T  +AL      +E    
Sbjct: 1347 QAAKENLTAQVEHLQ------AAVVEARAQASAAGILEEDLRTARSALKLKNEEVESERE 1400

Query: 547  KAVVLQAQNQM--SEAHKLLQKLLVHCQKLKNTEMVISVLL-SVAELYWRSSSPTIALPM 603
            +A  LQ Q ++  ++   L + L +  Q L   E  +  L   + EL  +      AL +
Sbjct: 1401 RAQALQEQGELKVAQGKALQENLALLTQTLAEREEEVETLRGQIQELEKQREMQKAALEL 1460

Query: 604  LLQALALSKEYRLQYLASETVLNLAFAQLIL 634
            L  +L L K  +   L  E +  L   + +L
Sbjct: 1461 L--SLDLKKRNQEVDLQQEQIQELEKCRSVL 1489


>gi|62899047 RAD50 interactor 1 [Homo sapiens]
          Length = 792

 Score = 31.2 bits (69), Expect = 3.7
 Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 6/112 (5%)

Query: 559 EAHKLLQKLLVHCQKLKNTEMVISVLLSVAELYWRSSSPTIALPMLLQALALSKEYRLQY 618
           E +  L+ L     KL+ ++ +++    + E Y   +SP++ LP+ +    L K +R  +
Sbjct: 262 EIYSYLETLFCQLLKLQTSDELLTEPKQLPEKYSLPASPSVILPIQVMLTPLQKRFRYHF 321

Query: 619 LASETVLNLA-----FAQLILGIPEQALSLLHMAIEPILADGAILDKGRAMF 665
             +     L+      AQ+++ I       L   I+PIL     L   R  F
Sbjct: 322 RGNRQTNVLSKPEWYLAQVLMWIGNHT-EFLDEKIQPILDKVGSLVNARLEF 372


>gi|83035129 coiled-coil domain containing 108 isoform 1 [Homo
            sapiens]
          Length = 1925

 Score = 31.2 bits (69), Expect = 3.7
 Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 16/81 (19%)

Query: 163  QNGEKKTVEDADMELTSRDEGERKMEKEEL----------DVSVREEEVSCSG------P 206
            + GE++  E+ + EL   +E E + E+EEL          +   +EE+VS +G      P
Sbjct: 1761 EEGEEEKGEEEEEELEEEEEEEEETEEEELGKEEIEEKEEERDEKEEKVSWAGIGPTPQP 1820

Query: 207  LSQKQAEFFLSQQASLLKNDE 227
             SQ+  ++   QQ +++  +E
Sbjct: 1821 ESQESMQWQWQQQLNVMVKEE 1841


>gi|11034845 Regulation of nuclear pre-mRNA domain containing 1B
           [Homo sapiens]
          Length = 326

 Score = 30.8 bits (68), Expect = 4.9
 Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 6/69 (8%)

Query: 48  GEGAVSLMERRRLNQLLLPLLQGPDITLSKLYKLIEESCPQLANSVQIRIKLMAEGELKD 107
           G  A  L +RR+L ++L+   Q     LS+  K +EE   +LA   Q+R       ELK 
Sbjct: 242 GRLAAELEDRRQLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVR------KELKS 295

Query: 108 MEQFFDDLS 116
             Q   DLS
Sbjct: 296 HIQSLPDLS 304


>gi|7656849 acyl-Coenzyme A dehydrogenase family, member 8 [Homo
           sapiens]
          Length = 415

 Score = 30.8 bits (68), Expect = 4.9
 Identities = 15/37 (40%), Positives = 20/37 (54%)

Query: 455 NAGVQQNNTESFAVALCHLAELHAEQGCFAAASEVLK 491
           NA V        AVALC +A+L A   CFA  ++ L+
Sbjct: 335 NAAVALQEERKDAVALCSMAKLFATDECFAICNQALQ 371


>gi|226693318 adenosine deaminase-like isoform 1 [Homo sapiens]
          Length = 328

 Score = 30.4 bits (67), Expect = 6.3
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 7/75 (9%)

Query: 182 EGERKMEKEELDVSVREEEV--SCSGPLSQKQA-----EFFLSQQASLLKNDETKALTPA 234
           EG ++ ++E LD+ VR         GPL  K+      EFFLS + ++L  D +   T  
Sbjct: 127 EGIKQSKQENLDIDVRYLIAVDRRGGPLVAKETVKLAEEFFLSTEGTVLGLDLSGDPTIP 186

Query: 235 SLQKELNNLLKFNPD 249
           + +KE   LL   PD
Sbjct: 187 NQKKETQILLDLLPD 201


>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
           sapiens]
          Length = 570

 Score = 30.4 bits (67), Expect = 6.3
 Identities = 17/62 (27%), Positives = 31/62 (50%)

Query: 166 EKKTVEDADMELTSRDEGERKMEKEELDVSVREEEVSCSGPLSQKQAEFFLSQQASLLKN 225
           EK+  E+   E   R E E KM ++E  +  +EE++     + Q+Q E    Q+  + + 
Sbjct: 364 EKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKIREQEEMMQEQEEKMGEQEEKMWEQ 423

Query: 226 DE 227
           +E
Sbjct: 424 EE 425


>gi|21359945 chromosome condensation protein G [Homo sapiens]
          Length = 1015

 Score = 30.4 bits (67), Expect = 6.3
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 247 NPDFAEAHYLSYLNNLRVQDVFSSTHSLLHYFDRLILTGAE 287
           N DFA  H++  L  L++ DV     +L   FD+L+  G E
Sbjct: 615 NQDFARKHFVLLLQVLQIDDVTIKISALKAIFDQLMTFGIE 655


>gi|68077164 Yeast Sps1/Ste20-related kinase 4 isoform 1 [Homo
           sapiens]
          Length = 1328

 Score = 30.4 bits (67), Expect = 6.3
 Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 6/73 (8%)

Query: 163 QNGEKKTVEDAD-MELTSRDEGERKMEKEELDV----SVREEEVSCSGPLSQKQAEFFLS 217
           +N + K +E+ + +E+T  ++G+  +  E L      +VREE++ C G  ++K  E   S
Sbjct: 306 ENWKSKEIEECNKIEITHFEKGQSLVSFENLKEGNIPAVREEDIDCHGSKTRKPEE-ENS 364

Query: 218 QQASLLKNDETKA 230
           Q  S  KN+ + A
Sbjct: 365 QYLSSRKNESSVA 377


>gi|221139761 zinc finger protein 853 [Homo sapiens]
          Length = 659

 Score = 30.0 bits (66), Expect = 8.3
 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 10/73 (13%)

Query: 165 GEKKTVEDADMELTSRDEGERKMEKEELDVSVREEEVSCSGPLSQKQAEFFLSQQASLLK 224
           G ++ +E    EL  + E ER+ E+ +L + ++EE          +Q E  L QQ   L+
Sbjct: 330 GSEQELEQQRQELERQQELERQQEQRQLQLKLQEE---------LQQLEQQLEQQQQQLE 380

Query: 225 NDETK-ALTPASL 236
             E +  LTP  L
Sbjct: 381 QQEVQLELTPVEL 393


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.132    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,991,388
Number of Sequences: 37866
Number of extensions: 998976
Number of successful extensions: 3625
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 3586
Number of HSP's gapped (non-prelim): 55
length of query: 755
length of database: 18,247,518
effective HSP length: 110
effective length of query: 645
effective length of database: 14,082,258
effective search space: 9083056410
effective search space used: 9083056410
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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