BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|20127553 anaphase-promoting complex subunit 5 isoform a [Homo sapiens] (755 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|20127553 anaphase-promoting complex subunit 5 isoform a [Homo... 1478 0.0 gi|213385323 anaphase-promoting complex subunit 5 isoform b [Hom... 1254 0.0 gi|21735569 claspin [Homo sapiens] 35 0.34 gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 34 0.57 gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 33 0.75 gi|130980075 centromere protein J [Homo sapiens] 33 0.98 gi|38488692 SH3 domain and tetratricopeptide repeats 2 [Homo sap... 33 0.98 gi|116089292 tetratricopeptide repeat domain 21B [Homo sapiens] 33 0.98 gi|51477718 TATA box binding protein-associated factor, RNA poly... 33 1.3 gi|31317305 M-phase phosphoprotein 10 [Homo sapiens] 32 1.7 gi|120431745 huntingtin-associated protein 1 isoform 4 [Homo sap... 32 1.7 gi|120431738 huntingtin-associated protein 1 isoform 2 [Homo sap... 32 1.7 gi|110347427 ubiquitin specific protease 34 [Homo sapiens] 32 1.7 gi|110611919 UDP glucuronosyltransferase 2 family, polypeptide A... 32 2.2 gi|4758980 pituitary tumor-transforming protein 1 [Homo sapiens] 32 2.8 gi|148747864 JAW1-related protein isoform a [Homo sapiens] 32 2.8 gi|154091334 JAW1-related protein isoform c [Homo sapiens] 32 2.8 gi|154091332 JAW1-related protein isoform b [Homo sapiens] 32 2.8 gi|148728182 JAW1-related protein isoform b [Homo sapiens] 32 2.8 gi|217416374 hypothetical protein LOC92749 [Homo sapiens] 32 2.8 gi|21735548 centrosomal protein 2 [Homo sapiens] 31 3.7 gi|62899047 RAD50 interactor 1 [Homo sapiens] 31 3.7 gi|83035129 coiled-coil domain containing 108 isoform 1 [Homo sa... 31 3.7 gi|11034845 Regulation of nuclear pre-mRNA domain containing 1B ... 31 4.9 gi|7656849 acyl-Coenzyme A dehydrogenase family, member 8 [Homo ... 31 4.9 gi|226693318 adenosine deaminase-like isoform 1 [Homo sapiens] 30 6.3 gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 30 6.3 gi|21359945 chromosome condensation protein G [Homo sapiens] 30 6.3 gi|68077164 Yeast Sps1/Ste20-related kinase 4 isoform 1 [Homo sa... 30 6.3 gi|221139761 zinc finger protein 853 [Homo sapiens] 30 8.3 >gi|20127553 anaphase-promoting complex subunit 5 isoform a [Homo sapiens] Length = 755 Score = 1478 bits (3827), Expect = 0.0 Identities = 755/755 (100%), Positives = 755/755 (100%) Query: 1 MASVHESLYFNPMMTNGVVHANVFGIKDWVTPYKIAVLVLLNEMSRTGEGAVSLMERRRL 60 MASVHESLYFNPMMTNGVVHANVFGIKDWVTPYKIAVLVLLNEMSRTGEGAVSLMERRRL Sbjct: 1 MASVHESLYFNPMMTNGVVHANVFGIKDWVTPYKIAVLVLLNEMSRTGEGAVSLMERRRL 60 Query: 61 NQLLLPLLQGPDITLSKLYKLIEESCPQLANSVQIRIKLMAEGELKDMEQFFDDLSDSFS 120 NQLLLPLLQGPDITLSKLYKLIEESCPQLANSVQIRIKLMAEGELKDMEQFFDDLSDSFS Sbjct: 61 NQLLLPLLQGPDITLSKLYKLIEESCPQLANSVQIRIKLMAEGELKDMEQFFDDLSDSFS 120 Query: 121 GTEPEVHKTSVVGLFLRHMILAYSKLSFSQVFKLYTALQQYFQNGEKKTVEDADMELTSR 180 GTEPEVHKTSVVGLFLRHMILAYSKLSFSQVFKLYTALQQYFQNGEKKTVEDADMELTSR Sbjct: 121 GTEPEVHKTSVVGLFLRHMILAYSKLSFSQVFKLYTALQQYFQNGEKKTVEDADMELTSR 180 Query: 181 DEGERKMEKEELDVSVREEEVSCSGPLSQKQAEFFLSQQASLLKNDETKALTPASLQKEL 240 DEGERKMEKEELDVSVREEEVSCSGPLSQKQAEFFLSQQASLLKNDETKALTPASLQKEL Sbjct: 181 DEGERKMEKEELDVSVREEEVSCSGPLSQKQAEFFLSQQASLLKNDETKALTPASLQKEL 240 Query: 241 NNLLKFNPDFAEAHYLSYLNNLRVQDVFSSTHSLLHYFDRLILTGAESKSNGEEGYGRSL 300 NNLLKFNPDFAEAHYLSYLNNLRVQDVFSSTHSLLHYFDRLILTGAESKSNGEEGYGRSL Sbjct: 241 NNLLKFNPDFAEAHYLSYLNNLRVQDVFSSTHSLLHYFDRLILTGAESKSNGEEGYGRSL 300 Query: 301 RYAALNLAALHCRFGHYQQAELALQEAIRIAQESNDHVCLQHCLSWLYVLGQKRSDSYVL 360 RYAALNLAALHCRFGHYQQAELALQEAIRIAQESNDHVCLQHCLSWLYVLGQKRSDSYVL Sbjct: 301 RYAALNLAALHCRFGHYQQAELALQEAIRIAQESNDHVCLQHCLSWLYVLGQKRSDSYVL 360 Query: 361 LEHSVKKAVHFGLPYLASLGIQSLVQQRAFAGKTANKLMDALKDSDLLHWKHSLSELIDI 420 LEHSVKKAVHFGLPYLASLGIQSLVQQRAFAGKTANKLMDALKDSDLLHWKHSLSELIDI Sbjct: 361 LEHSVKKAVHFGLPYLASLGIQSLVQQRAFAGKTANKLMDALKDSDLLHWKHSLSELIDI 420 Query: 421 SIAQKTAIWRLYGRSTMALQQAQMLLSMNSLEAVNAGVQQNNTESFAVALCHLAELHAEQ 480 SIAQKTAIWRLYGRSTMALQQAQMLLSMNSLEAVNAGVQQNNTESFAVALCHLAELHAEQ Sbjct: 421 SIAQKTAIWRLYGRSTMALQQAQMLLSMNSLEAVNAGVQQNNTESFAVALCHLAELHAEQ 480 Query: 481 GCFAAASEVLKHLKERFPPNSQHAQLWMLCDQKIQFDRAMNDGKYHLADSLVTGITALNS 540 GCFAAASEVLKHLKERFPPNSQHAQLWMLCDQKIQFDRAMNDGKYHLADSLVTGITALNS Sbjct: 481 GCFAAASEVLKHLKERFPPNSQHAQLWMLCDQKIQFDRAMNDGKYHLADSLVTGITALNS 540 Query: 541 IEGVYRKAVVLQAQNQMSEAHKLLQKLLVHCQKLKNTEMVISVLLSVAELYWRSSSPTIA 600 IEGVYRKAVVLQAQNQMSEAHKLLQKLLVHCQKLKNTEMVISVLLSVAELYWRSSSPTIA Sbjct: 541 IEGVYRKAVVLQAQNQMSEAHKLLQKLLVHCQKLKNTEMVISVLLSVAELYWRSSSPTIA 600 Query: 601 LPMLLQALALSKEYRLQYLASETVLNLAFAQLILGIPEQALSLLHMAIEPILADGAILDK 660 LPMLLQALALSKEYRLQYLASETVLNLAFAQLILGIPEQALSLLHMAIEPILADGAILDK Sbjct: 601 LPMLLQALALSKEYRLQYLASETVLNLAFAQLILGIPEQALSLLHMAIEPILADGAILDK 660 Query: 661 GRAMFLVAKCQVASAASYDQPKKAEALEAAIENLNEAKNYFAKVDCKERIRDVVYFQARL 720 GRAMFLVAKCQVASAASYDQPKKAEALEAAIENLNEAKNYFAKVDCKERIRDVVYFQARL Sbjct: 661 GRAMFLVAKCQVASAASYDQPKKAEALEAAIENLNEAKNYFAKVDCKERIRDVVYFQARL 720 Query: 721 YHTLGKTQERNRCAMLFRQLHQELPSHGVPLINHL 755 YHTLGKTQERNRCAMLFRQLHQELPSHGVPLINHL Sbjct: 721 YHTLGKTQERNRCAMLFRQLHQELPSHGVPLINHL 755 >gi|213385323 anaphase-promoting complex subunit 5 isoform b [Homo sapiens] Length = 643 Score = 1254 bits (3244), Expect = 0.0 Identities = 643/656 (98%), Positives = 643/656 (98%), Gaps = 13/656 (1%) Query: 100 MAEGELKDMEQFFDDLSDSFSGTEPEVHKTSVVGLFLRHMILAYSKLSFSQVFKLYTALQ 159 MAEGELKDMEQFFDDLSDSFSGTEPEVHKTSVVGLFLRHMILAYSKLSFSQVFKLYTALQ Sbjct: 1 MAEGELKDMEQFFDDLSDSFSGTEPEVHKTSVVGLFLRHMILAYSKLSFSQVFKLYTALQ 60 Query: 160 QYFQNGEKKTVEDADMELTSRDEGERKMEKEELDVSVREEEVSCSGPLSQKQAEFFLSQQ 219 QYFQNGEKKTVEDADMELTSRDEGERKMEKEELDVSVREEEVSCSGPLSQKQAEFFLSQQ Sbjct: 61 QYFQNGEKKTVEDADMELTSRDEGERKMEKEELDVSVREEEVSCSGPLSQKQAEFFLSQQ 120 Query: 220 ASLLKNDETKALTPASLQKELNNLLKFNPDFAEAHYLSYLNNLRVQDVFSSTHSLLHYFD 279 ASLLKNDETKALTPASLQKELNNLLKFNPDFAEAHYLSYLNNLRVQDVFSSTHSLLHYFD Sbjct: 121 ASLLKNDETKALTPASLQKELNNLLKFNPDFAEAHYLSYLNNLRVQDVFSSTHSLLHYFD 180 Query: 280 RLILTGAESKSNGEEGYGRSLRYAALNLAALHCRFGHYQQAELALQEAIRIAQESNDHVC 339 RLILTGAESKSNGEEGYGRSLRYAALNLAALHCRFGHYQQAELALQEAIRIAQESNDHVC Sbjct: 181 RLILTGAESKSNGEEGYGRSLRYAALNLAALHCRFGHYQQAELALQEAIRIAQESNDHVC 240 Query: 340 LQHCLSWLYVLGQKRSDSYVLLEHSVKKAVHFGLPYLASLGIQSLVQQRAFAGKTANKLM 399 LQHCLSWLYVLGQKRSDSYVLLEHSVKKAVHFGLP RAFAGKTANKLM Sbjct: 241 LQHCLSWLYVLGQKRSDSYVLLEHSVKKAVHFGLP-------------RAFAGKTANKLM 287 Query: 400 DALKDSDLLHWKHSLSELIDISIAQKTAIWRLYGRSTMALQQAQMLLSMNSLEAVNAGVQ 459 DALKDSDLLHWKHSLSELIDISIAQKTAIWRLYGRSTMALQQAQMLLSMNSLEAVNAGVQ Sbjct: 288 DALKDSDLLHWKHSLSELIDISIAQKTAIWRLYGRSTMALQQAQMLLSMNSLEAVNAGVQ 347 Query: 460 QNNTESFAVALCHLAELHAEQGCFAAASEVLKHLKERFPPNSQHAQLWMLCDQKIQFDRA 519 QNNTESFAVALCHLAELHAEQGCFAAASEVLKHLKERFPPNSQHAQLWMLCDQKIQFDRA Sbjct: 348 QNNTESFAVALCHLAELHAEQGCFAAASEVLKHLKERFPPNSQHAQLWMLCDQKIQFDRA 407 Query: 520 MNDGKYHLADSLVTGITALNSIEGVYRKAVVLQAQNQMSEAHKLLQKLLVHCQKLKNTEM 579 MNDGKYHLADSLVTGITALNSIEGVYRKAVVLQAQNQMSEAHKLLQKLLVHCQKLKNTEM Sbjct: 408 MNDGKYHLADSLVTGITALNSIEGVYRKAVVLQAQNQMSEAHKLLQKLLVHCQKLKNTEM 467 Query: 580 VISVLLSVAELYWRSSSPTIALPMLLQALALSKEYRLQYLASETVLNLAFAQLILGIPEQ 639 VISVLLSVAELYWRSSSPTIALPMLLQALALSKEYRLQYLASETVLNLAFAQLILGIPEQ Sbjct: 468 VISVLLSVAELYWRSSSPTIALPMLLQALALSKEYRLQYLASETVLNLAFAQLILGIPEQ 527 Query: 640 ALSLLHMAIEPILADGAILDKGRAMFLVAKCQVASAASYDQPKKAEALEAAIENLNEAKN 699 ALSLLHMAIEPILADGAILDKGRAMFLVAKCQVASAASYDQPKKAEALEAAIENLNEAKN Sbjct: 528 ALSLLHMAIEPILADGAILDKGRAMFLVAKCQVASAASYDQPKKAEALEAAIENLNEAKN 587 Query: 700 YFAKVDCKERIRDVVYFQARLYHTLGKTQERNRCAMLFRQLHQELPSHGVPLINHL 755 YFAKVDCKERIRDVVYFQARLYHTLGKTQERNRCAMLFRQLHQELPSHGVPLINHL Sbjct: 588 YFAKVDCKERIRDVVYFQARLYHTLGKTQERNRCAMLFRQLHQELPSHGVPLINHL 643 >gi|21735569 claspin [Homo sapiens] Length = 1339 Score = 34.7 bits (78), Expect = 0.34 Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 21/139 (15%) Query: 166 EKKTVEDADMELTSRDEGERKMEKEELDVSVREEEVSCSGPL---SQKQAEFFLSQQASL 222 E++ E+ +M S ++GE K+EKEE + + EEE +Q+ AEF LS + Sbjct: 629 EEEEEEEEEMTDESEEDGEEKVEKEEKEEELEEEEEKEEEEEEEGNQETAEFLLSSEEIE 688 Query: 223 LKNDETKALTPASLQKELNNLLKFNPDFAEAHYLSYLNNLRVQDVFSSTHSLLHYFDRLI 282 K+++ + KE N+ + + L V SS +LL + D Sbjct: 689 TKDEK-------EMDKENND--------GSSEIGKAVGFLSVPKSLSSDSTLLLFKDSSS 733 Query: 283 LTG---AESKSNGEEGYGR 298 G E KS +E G+ Sbjct: 734 KMGYFPTEEKSETDENSGK 752 >gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with transmembrane signal), 1 [Homo sapiens] Length = 3259 Score = 33.9 bits (76), Expect = 0.57 Identities = 97/540 (17%), Positives = 202/540 (37%), Gaps = 65/540 (12%) Query: 64 LLPLLQGPDITLSKLYKLIEESCPQLANSVQIRIKLMAEGELKDMEQFFDDLS---DSFS 120 L +++ D+ L + + ++E N ++ ++KL A+ +L + ++ +++ + Sbjct: 64 LKDIIRQKDVQLQQKDEALQEERKAADNKIK-KLKLHAKAKLTSLNKYIEEMKAQGGTVL 122 Query: 121 GTEPEVH-------KTSVVGLFLRHMILAYSKLSFSQVFKLYTALQQYFQNGEKKTVEDA 173 TEP+ K+S M + K + +L + LQ + + + Sbjct: 123 PTEPQSEEQLSKHDKSSTE----EEMEIEKIKHKLQEKEELISTLQAQLTQAQAEQPAQS 178 Query: 174 DMELTSRDEGERKMEKEELDVSVREEEVS-------CSGPLSQKQAEFFLSQQASLLKND 226 E+ +++++++E +S + ++S + +K A F Q L +++ Sbjct: 179 STEMEEFVMMKQQLQEKEEFISTLQAQLSQTQAEQAAQQVVREKDARF--ETQVRLHEDE 236 Query: 227 ETKALTPASLQKELNNLLKFNPDFAEAHYLSYLNNLRVQDVFSSTHSLLHYFDRLILTGA 286 + +T A ++ E+ L+ E H S + +V D+ + ++++ Sbjct: 237 LLQLVTQADVETEMQQKLRVLQRKLEEHEESLVGRAQVVDLLQQELTAAEQRNQILSQQL 296 Query: 287 ESKSNGEEGYGRSLRYAALNLAALHCRFGHYQQAELALQEAIRIAQESNDHVCLQHCLSW 346 + E +LR N ++ L+ A R N + H L Sbjct: 297 QQM----EAEHNTLR----NTVETEREESKILLEKMELEVAERKLSFHNLQEEMHHLLEQ 348 Query: 347 LYVLGQKRSD---SYVLLEHSVKKAVHFGLPYLASLGIQSLVQQRAFAGKTANKLMDALK 403 GQ +++ Y LE K + ++ SL G+ DALK Sbjct: 349 FEQAGQAQAELESRYSALEQKHKAEMEEKTSHILSL---------QKTGQELQSACDALK 399 Query: 404 D--SDLLHWKH--------SLSELIDISIAQKTAIWRLYGRSTMALQQAQMLLSMNSLEA 453 D S LL K+ ++ +L D + I + R + LQQ + + + Sbjct: 400 DQNSKLLQDKNEQAVQSAQTIQQLEDQLQQKSKEISQFLNR--LPLQQHETASQTSFPDV 457 Query: 454 VNAGVQQNNTESFAVALCHLAELHAEQGCFAAASEVLKHLKERFPPNSQHAQLWMLCDQK 513 N G Q E+ A + EL E+G +S L+ LK S L ++ Sbjct: 458 YNEGTQAVTEENIASLQKRVVELENEKGALLLSSIELEELKAENEKLSSQITLLEAQNRT 517 Query: 514 IQFDRAMNDGKYHLADSLVTGITALNSIEGVYRKAVVLQAQNQMSEAHKLLQKLLVHCQK 573 + DR +++ ++ + N ++ +N S+ HK L LL+ ++ Sbjct: 518 GEADREVSE---------ISIVDIANKRSSSAEESGQDVLENTFSQKHKELSVLLLEMKE 568 Score = 30.0 bits (66), Expect = 8.3 Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 17/148 (11%) Query: 102 EGELKDMEQFFDDLSDSFSGTEPEVHKTSVVGLFLRHMILAYSKLSFSQVFKLYTALQQ- 160 E +LK+ E+ +DL SF+ + E S + K+S SQ+ + TALQ+ Sbjct: 2573 EEKLKESEEANEDLRRSFNALQEEKQDLS--------KEIESLKVSISQLTRQVTALQEE 2624 Query: 161 -----YFQNGEKKTVEDADMELTSRDEGERKMEKEELDVSVREEEVSCSGPLSQKQAEFF 215 Y + K E + +R E EE V V++E G + K + Sbjct: 2625 GTLGLYHAQLKVKEEEVHRLSALFSSSQKRIAELEEELVCVQKEAAKKVGEIEDKLKKEL 2684 Query: 216 --LSQQASLLKND-ETKALTPASLQKEL 240 L A +++N+ ET A L ++L Sbjct: 2685 KHLHHDAGIMRNETETAEERVAELARDL 2712 >gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] Length = 2230 Score = 33.5 bits (75), Expect = 0.75 Identities = 39/174 (22%), Positives = 77/174 (44%), Gaps = 28/174 (16%) Query: 76 SKLYKLIEESCPQLANSVQIRIKLMAEGELKDMEQFFDDLSDSFSGTEPEVHKTSVVGLF 135 +K +L+EE+ + + S ++ KL L +ME +DL +G E E K Sbjct: 1894 NKPTELLEENTEEKSKSHLVQPKL-----LSNMEAQHNDLEFKLAGAEREKQKLG----- 1943 Query: 136 LRHMILAYSKLSFSQVFKLYTALQQYFQNGEKKTVEDADMELTSRDEGERKMEKEELDV- 194 ++ +L L+ + ++ +E E E + K E+E+L++ Sbjct: 1944 -------------KEIVRLQKDLRM-LRKEHQQELEILKKEYDQEREEKIKQEQEDLELK 1989 Query: 195 ---SVREEEVSCSGPLSQKQAEFFLSQQASLLKNDETKALTPASLQKELNNLLK 245 ++++ + L+QK+ E ++ + ++ K E +A S Q+E N LLK Sbjct: 1990 HNSTLKQLMREFNTQLAQKEQELEMTIKETINKAQEVEAELLESHQEETNQLLK 2043 >gi|130980075 centromere protein J [Homo sapiens] Length = 1338 Score = 33.1 bits (74), Expect = 0.98 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 13/93 (13%) Query: 155 YTALQQYFQNG-EKKTVEDADMELTSRDEGERKMEKEELD--VSVREEEVSCSGPLSQKQ 211 +T + FQ G E K V + + TS D+ KM++++L +++ +E+ P+ +K Sbjct: 385 FTNAKSKFQKGKESKLVTN---QSTSEDQPLFKMDRQQLQRKTALKNKELCADNPILKKD 441 Query: 212 AE-------FFLSQQASLLKNDETKALTPASLQ 237 ++ LSQ+ +LK K+L+P+ L+ Sbjct: 442 SKARTKSGSVTLSQKPKMLKCSNRKSLSPSGLK 474 >gi|38488692 SH3 domain and tetratricopeptide repeats 2 [Homo sapiens] Length = 1288 Score = 33.1 bits (74), Expect = 0.98 Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 5/90 (5%) Query: 563 LLQKLLVHCQKLKNTEMVISVLLSVAELYWRSSSPTIALPMLLQALALSKEYRLQYLASE 622 +L++ L C++L + ++ L ++++Y SP A+ L QAL L + Q + E Sbjct: 739 MLRQALAACEELADRSTQRALCLILSKVYLEHRSPDGAIHYLSQALVLGQLLGEQE-SFE 797 Query: 623 TVLNLAFAQLILGIPEQALSLLHMAIEPIL 652 + L LA+A L+ ++AL +L EP+L Sbjct: 798 SSLCLAWAYLLASQAKKALDVL----EPLL 823 >gi|116089292 tetratricopeptide repeat domain 21B [Homo sapiens] Length = 1316 Score = 33.1 bits (74), Expect = 0.98 Identities = 161/710 (22%), Positives = 258/710 (36%), Gaps = 170/710 (23%) Query: 81 LIEESCPQLANSVQIRIKLMAEGELKDMEQFFDDLSDSFSGTEPEVHKTSVVGLFLRHMI 140 L+++S A +Q + EG+++ ++L ++ EP+ + ++ Sbjct: 239 LLQDSQNVEALRMQALYYVCREGDIEKASTKLENLGNTLDAMEPQNAQ------LFYNIT 292 Query: 141 LAYSKL-SFSQVF--KLYTALQQYF----QNGEKKTVEDADMELTSRDEGERKMEK---- 189 LA+S+ SQ+ K+ T L++ F Q E T M L R + K K Sbjct: 293 LAFSRTCGRSQLILQKIQTLLERAFSLNPQQSEFATELGYQMILQGRVKEALKWYKTAMT 352 Query: 190 -EELDVSVREEEVSCS---GPL--SQKQAEFFLSQQASLLKNDE------TKALTPASLQ 237 +E VS + C G L + +Q EF Q S+ K+ E A+ Q Sbjct: 353 LDETSVSALVGFIQCQLIEGQLQDADQQLEFLNEIQQSIGKSAELIYLHAVLAMKKNKRQ 412 Query: 238 KELNNLL----------------------KFNPDFAEAHYLSYLNNLRVQDVFSSTHSLL 275 +E+ NLL K NPDF + YL+ +Q +S L Sbjct: 413 EEVINLLNDVLDTHFSQLEGLPLGIQYFEKLNPDFLLEIVMEYLSFCPMQP--ASPGQPL 470 Query: 276 HYFDRLILTGAESKSNGEEGYGRSL------RYAALNLAALHCRFGH-------YQQAEL 322 R ++ E+ G +++ +Y + ++ A H Y A L Sbjct: 471 CPLLRRCISVLETVVRTVPGLLQTVFLIAKVKYLSGDIEAAFNNLQHCLEHNPSYADAHL 530 Query: 323 AL------QEAIRIAQESNDHVCLQHCLSW--------LYVLGQKRSDSYVLLEHSVKKA 368 L QE +++ +S L+ CLS+ LY L + +S + K Sbjct: 531 LLAQVYLSQEKVKLCSQS-----LELCLSYDFKVRDYPLYHLIKAQSQKKMGEIADAIKT 585 Query: 369 VHFGLPYLASLGIQSLVQQRAFAGKTANKLMDALKDSDLLHWKHSLSELIDISIAQKTAI 428 +H + SL + T +K D + D H ELID+ Sbjct: 586 LHMAM---------SLPGMKRIGASTKSK--DRKTEVDTSHRLSIFLELIDVH------- 627 Query: 429 WRLYGR---STMALQQAQMLLSMNSLEA------VNAGVQQNNTESFAVALCHLAELHAE 479 RL G +T LQ A S S E + + Q + E AL L + AE Sbjct: 628 -RLNGEQHEATKVLQDAIHEFSGTSEEVRVTIANADLALAQGDIER---ALSILQNVTAE 683 Query: 480 QGCFAAASE-----VLKHLKERFPPNSQHAQLWMLCDQKIQFDRAMNDGKYHLADSLVTG 534 Q F A E LKH K++ L++ C ++I +R N + L+ G Sbjct: 684 QPYFIEAREKMADIYLKHRKDKM--------LYITCFREIA-ERMANPRSF-----LLLG 729 Query: 535 ITALNSIEGVYRKAVVLQAQNQMSEAHKLLQKLLVHCQKLKNTEMVISVLLSVAELYWRS 594 +N +E QA NQ + L K+ K N M I+ Y+ + Sbjct: 730 DAYMNILEPEEAIVAYEQALNQNPKDGTLASKMGKALIKTHNYSMAIT--------YYEA 781 Query: 595 SSPTIALPMLLQALALSKEYRLQYLASETVLNLAFAQLILGIPEQALSLLHMAIEPILAD 654 AL ++ L Y +E +L L + + + AL A EP+ Sbjct: 782 ------------ALKTGQKNYLCYDLAELLLKLKWYDKAEKVLQHAL-----AHEPVNEL 824 Query: 655 GAILDKGRAMFLVAKCQVASAASYDQPKKAEALEAAIENLNEAKNYFAKV 704 A+++ GR L+AK K E L AI L +A+ A+V Sbjct: 825 SALMEDGRCQVLLAKVY----------SKMEKLGDAITALQQARELQARV 864 >gi|51477718 TATA box binding protein-associated factor, RNA polymerase II, Q [Homo sapiens] Length = 462 Score = 32.7 bits (73), Expect = 1.3 Identities = 33/154 (21%), Positives = 63/154 (40%), Gaps = 14/154 (9%) Query: 87 PQLANSVQIRIKLMAEGELKDMEQFFDDLSDSFSGTEPEVHKTSVVGLFLRHMILAYSKL 146 P + N V+ ++ AE E +D GT+ + S+ G + + ++ + Sbjct: 259 PDVENEVKRLLRSDAEAVSTRWEVIAED------GTKEIESQGSIPGFLISSGMSSHKQG 312 Query: 147 SFSQVFKLYTALQQYFQNGEKKTVEDADMELTSRDEGERKMEKEELDVSVREEEVSCSGP 206 S Y L++ F + +D D + DE E + E E+ D EEE CS Sbjct: 313 HTSSE---YDMLREMFSDSRSNNDDDEDED----DEDEDEDEDEDEDEDKEEEEEDCSEE 365 Query: 207 LSQKQAEFFLSQQASLLKNDETKALTPASLQKEL 240 ++Q + + N+ T ++ +QK++ Sbjct: 366 YLERQLQAEFIESGQYRANEGTSSIV-MEIQKQI 398 >gi|31317305 M-phase phosphoprotein 10 [Homo sapiens] Length = 681 Score = 32.3 bits (72), Expect = 1.7 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 10/55 (18%) Query: 160 QYFQNGEKKTVEDADMELTSRDEGERKME---------KEELDVSVREEEVSCSG 205 QYFQN +T+ D D+ L E + + E KE+L+ + EEEVS G Sbjct: 89 QYFQNAVSETINDEDISLLPESEEQEREEDGSEIEADDKEDLE-DLEEEEVSDMG 142 >gi|120431745 huntingtin-associated protein 1 isoform 4 [Homo sapiens] Length = 594 Score = 32.3 bits (72), Expect = 1.7 Identities = 47/177 (26%), Positives = 72/177 (40%), Gaps = 34/177 (19%) Query: 58 RRLNQLLLPLLQGPDITLSK-----LYKLIEESCPQLANSVQIRIKLMAEGELKDMEQFF 112 R L + L P L P +++ + L+EE P + SV + L E +L + Sbjct: 152 RELEEALCPNLPPPVKKITQEDVKVMLYLLEELLPPVWESVTYGMVLQRERDLNTAARIG 211 Query: 113 DDLSDSFSGTEPEVHKT-SVVG------LFLRHMILAYSKLSFSQVFKLYTALQQYFQNG 165 L S E K +++G L+LRH + +L LQ Y + Sbjct: 212 QSLVKQNSVLMEENSKLEALLGSAKEEILYLRHQVNLRDEL-----------LQLYSDSD 260 Query: 166 EKKTVEDADMELTSRDEGERKMEKEELDVSVREEEVSCSGPLSQKQAEFFLSQQASL 222 E ED D E +E E K +EE + EE++ C+ P A +SQ+A L Sbjct: 261 E----EDEDEE----EEEEEKEAEEEQEEEEAEEDLQCAHPC---DAPKLISQEALL 306 >gi|120431738 huntingtin-associated protein 1 isoform 2 [Homo sapiens] Length = 619 Score = 32.3 bits (72), Expect = 1.7 Identities = 47/177 (26%), Positives = 72/177 (40%), Gaps = 34/177 (19%) Query: 58 RRLNQLLLPLLQGPDITLSK-----LYKLIEESCPQLANSVQIRIKLMAEGELKDMEQFF 112 R L + L P L P +++ + L+EE P + SV + L E +L + Sbjct: 152 RELEEALCPNLPPPVKKITQEDVKVMLYLLEELLPPVWESVTYGMVLQRERDLNTAARIG 211 Query: 113 DDLSDSFSGTEPEVHKT-SVVG------LFLRHMILAYSKLSFSQVFKLYTALQQYFQNG 165 L S E K +++G L+LRH + +L LQ Y + Sbjct: 212 QSLVKQNSVLMEENSKLEALLGSAKEEILYLRHQVNLRDEL-----------LQLYSDSD 260 Query: 166 EKKTVEDADMELTSRDEGERKMEKEELDVSVREEEVSCSGPLSQKQAEFFLSQQASL 222 E ED D E +E E K +EE + EE++ C+ P A +SQ+A L Sbjct: 261 E----EDEDEE----EEEEEKEAEEEQEEEEAEEDLQCAHPC---DAPKLISQEALL 306 >gi|110347427 ubiquitin specific protease 34 [Homo sapiens] Length = 3546 Score = 32.3 bits (72), Expect = 1.7 Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 6/105 (5%) Query: 103 GELKDMEQFFDDLSDSFSGTEPEVHKT--SVVGLFLRHMILAYSKLSFSQVFKLYTALQQ 160 GE KDM +FF DL PE+ T S+ G + + +++ SQ + + ++ Sbjct: 1974 GEQKDMTEFFTDLITKIEEMSPELKNTVKSLFGGVITNNVVSLDCEHVSQTAEEFYTVR- 2032 Query: 161 YFQNGEKKTVEDADMELTSRD--EGERKMEKEELDVSVREEEVSC 203 Q + K + ++ E+T +D EG+ VR E+ +C Sbjct: 2033 -CQVADMKNIYESLDEVTIKDTLEGDNMYTCSHCGKKVRAEKRAC 2076 >gi|110611919 UDP glucuronosyltransferase 2 family, polypeptide A1 [Homo sapiens] Length = 527 Score = 32.0 bits (71), Expect = 2.2 Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 3/68 (4%) Query: 483 FAAASEVLKHL-KERFPPNSQHAQLWMLCDQKIQFDRAMNDGKYHLADSLVTGITALNSI 541 F+ AS V KH K +PP+ A L L DQ DR N YHL D + T S Sbjct: 173 FSPASTVEKHCGKVPYPPSYVPAVLSELTDQMSFTDRIRNFISYHLQDYMFE--TLWKSW 230 Query: 542 EGVYRKAV 549 + Y KA+ Sbjct: 231 DSYYSKAL 238 >gi|4758980 pituitary tumor-transforming protein 1 [Homo sapiens] Length = 202 Score = 31.6 bits (70), Expect = 2.8 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 10/70 (14%) Query: 198 EEEVSCSGPLSQKQAEFFLSQQASLLKNDETKALTPAS--LQKELNNLLKFNP------D 249 E+ V GPL QKQ F S + K + K+ PAS E+ FNP D Sbjct: 72 EKSVKTKGPLKQKQPSF--SAKKMTEKTVKAKSSVPASDDAYPEIEKFFPFNPLDFESFD 129 Query: 250 FAEAHYLSYL 259 E H +++L Sbjct: 130 LPEEHQIAHL 139 >gi|148747864 JAW1-related protein isoform a [Homo sapiens] Length = 903 Score = 31.6 bits (70), Expect = 2.8 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Query: 157 ALQQYFQNGEKKTVEDADMELTSRDEGERKMEKEELDVSVREEEVSCSGPLSQKQAE 213 A + FQ G KKT E D++ +E E+K E E V E E GP S K E Sbjct: 774 AYSKGFQEGLKKTKELQDLK---EEEEEQKSESPEEPEEVEETEEEEKGPRSSKLEE 827 >gi|154091334 JAW1-related protein isoform c [Homo sapiens] Length = 597 Score = 31.6 bits (70), Expect = 2.8 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Query: 157 ALQQYFQNGEKKTVEDADMELTSRDEGERKMEKEELDVSVREEEVSCSGPLSQKQAE 213 A + FQ G KKT E D++ +E E+K E E V E E GP S K E Sbjct: 468 AYSKGFQEGLKKTKELQDLK---EEEEEQKSESPEEPEEVEETEEEEKGPRSSKLEE 521 >gi|154091332 JAW1-related protein isoform b [Homo sapiens] Length = 821 Score = 31.6 bits (70), Expect = 2.8 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Query: 157 ALQQYFQNGEKKTVEDADMELTSRDEGERKMEKEELDVSVREEEVSCSGPLSQKQAE 213 A + FQ G KKT E D++ +E E+K E E V E E GP S K E Sbjct: 692 AYSKGFQEGLKKTKELQDLK---EEEEEQKSESPEEPEEVEETEEEEKGPRSSKLEE 745 >gi|148728182 JAW1-related protein isoform b [Homo sapiens] Length = 821 Score = 31.6 bits (70), Expect = 2.8 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Query: 157 ALQQYFQNGEKKTVEDADMELTSRDEGERKMEKEELDVSVREEEVSCSGPLSQKQAE 213 A + FQ G KKT E D++ +E E+K E E V E E GP S K E Sbjct: 692 AYSKGFQEGLKKTKELQDLK---EEEEEQKSESPEEPEEVEETEEEEKGPRSSKLEE 745 >gi|217416374 hypothetical protein LOC92749 [Homo sapiens] Length = 740 Score = 31.6 bits (70), Expect = 2.8 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 166 EKKTVEDADMELTSR-DEGERKMEKEELDVSVREEEVSCSGPLSQKQAEFFLSQQASLLK 224 E KT +D E+TS+ +EG++K +EL + +++ C+G L K QQ K Sbjct: 126 EVKTSQDKFDEITSKWEEGKQKRIPQELWEMLNTQQLHCAGLLEDKNKLISELQQELKTK 185 Query: 225 NDE 227 +D+ Sbjct: 186 DDQ 188 >gi|21735548 centrosomal protein 2 [Homo sapiens] Length = 2442 Score = 31.2 bits (69), Expect = 3.7 Identities = 108/511 (21%), Positives = 190/511 (37%), Gaps = 73/511 (14%) Query: 167 KKTVEDADMELTSRDEGERKMEKE------------ELDVSVREEEVSCSGPLSQKQAEF 214 +K VED +L ++D+ +R +E+E + + E+ S + L +K+ Sbjct: 1009 QKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRL 1068 Query: 215 FLSQQASLLKNDETKAL-----TPASLQKELN---NLLKFNPDFAEAHYLSYLNNLRVQD 266 + Q+A ++ E AL QKEL+ LL+ EA +L+ ++ + Sbjct: 1069 LVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLA--QEAQLLE 1126 Query: 267 VFSSTHSLLHYFDRLILTGAESKSNGEEGYGRSLRYAALNLAALHCRFGHYQQAELALQE 326 ++H + R L E+K+ + RS + L A + G+ QA+ L Sbjct: 1127 ELEASH-ITEQQLRASLWAQEAKAAQLQLRLRSTE-SQLEALAAEQQPGNQAQAQAQLAS 1184 Query: 327 AIRIAQESNDHVCLQHCLSWLYVLGQKRSDSYVL-LEHSVKKAVHFGLPYLASLGIQSLV 385 Q++ VC L G + L + + +++ P L +L +++ Sbjct: 1185 LYSALQQALGSVC--ESRPELSGGGDSAPSVWGLEPDQNGARSLFKRGPLLTALSAEAVA 1242 Query: 386 QQRAFAGKTANKLMDALKDSDLLHWK-HSLSELIDISIAQKTAIWRLYGRSTMALQQAQM 444 + K L + D+L + L E + + A+K+ + LQ Q Sbjct: 1243 ---SALHKLHQDLWKTQQTRDVLRDQVQKLEERLTDTEAEKSQV-------HTELQDLQR 1292 Query: 445 LLSMNSLEAVNAGVQQNNTESFAVALCHLAELHAEQGCFAA--------------ASEVL 490 LS N E +QN+ ES L ELH + E+L Sbjct: 1293 QLSQNQEEKSKWEGKQNSLES------ELMELHETMASLQSRLRRAELQRMEAQGERELL 1346 Query: 491 KHLKERFPPNSQHAQLWMLCDQKIQFDRAMNDGKYHLADSLVTGITAL----NSIEGVYR 546 + KE +H Q + RA L + L T +AL +E Sbjct: 1347 QAAKENLTAQVEHLQ------AAVVEARAQASAAGILEEDLRTARSALKLKNEEVESERE 1400 Query: 547 KAVVLQAQNQM--SEAHKLLQKLLVHCQKLKNTEMVISVLL-SVAELYWRSSSPTIALPM 603 +A LQ Q ++ ++ L + L + Q L E + L + EL + AL + Sbjct: 1401 RAQALQEQGELKVAQGKALQENLALLTQTLAEREEEVETLRGQIQELEKQREMQKAALEL 1460 Query: 604 LLQALALSKEYRLQYLASETVLNLAFAQLIL 634 L +L L K + L E + L + +L Sbjct: 1461 L--SLDLKKRNQEVDLQQEQIQELEKCRSVL 1489 >gi|62899047 RAD50 interactor 1 [Homo sapiens] Length = 792 Score = 31.2 bits (69), Expect = 3.7 Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 6/112 (5%) Query: 559 EAHKLLQKLLVHCQKLKNTEMVISVLLSVAELYWRSSSPTIALPMLLQALALSKEYRLQY 618 E + L+ L KL+ ++ +++ + E Y +SP++ LP+ + L K +R + Sbjct: 262 EIYSYLETLFCQLLKLQTSDELLTEPKQLPEKYSLPASPSVILPIQVMLTPLQKRFRYHF 321 Query: 619 LASETVLNLA-----FAQLILGIPEQALSLLHMAIEPILADGAILDKGRAMF 665 + L+ AQ+++ I L I+PIL L R F Sbjct: 322 RGNRQTNVLSKPEWYLAQVLMWIGNHT-EFLDEKIQPILDKVGSLVNARLEF 372 >gi|83035129 coiled-coil domain containing 108 isoform 1 [Homo sapiens] Length = 1925 Score = 31.2 bits (69), Expect = 3.7 Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 16/81 (19%) Query: 163 QNGEKKTVEDADMELTSRDEGERKMEKEEL----------DVSVREEEVSCSG------P 206 + GE++ E+ + EL +E E + E+EEL + +EE+VS +G P Sbjct: 1761 EEGEEEKGEEEEEELEEEEEEEEETEEEELGKEEIEEKEEERDEKEEKVSWAGIGPTPQP 1820 Query: 207 LSQKQAEFFLSQQASLLKNDE 227 SQ+ ++ QQ +++ +E Sbjct: 1821 ESQESMQWQWQQQLNVMVKEE 1841 >gi|11034845 Regulation of nuclear pre-mRNA domain containing 1B [Homo sapiens] Length = 326 Score = 30.8 bits (68), Expect = 4.9 Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 6/69 (8%) Query: 48 GEGAVSLMERRRLNQLLLPLLQGPDITLSKLYKLIEESCPQLANSVQIRIKLMAEGELKD 107 G A L +RR+L ++L+ Q LS+ K +EE +LA Q+R ELK Sbjct: 242 GRLAAELEDRRQLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVR------KELKS 295 Query: 108 MEQFFDDLS 116 Q DLS Sbjct: 296 HIQSLPDLS 304 >gi|7656849 acyl-Coenzyme A dehydrogenase family, member 8 [Homo sapiens] Length = 415 Score = 30.8 bits (68), Expect = 4.9 Identities = 15/37 (40%), Positives = 20/37 (54%) Query: 455 NAGVQQNNTESFAVALCHLAELHAEQGCFAAASEVLK 491 NA V AVALC +A+L A CFA ++ L+ Sbjct: 335 NAAVALQEERKDAVALCSMAKLFATDECFAICNQALQ 371 >gi|226693318 adenosine deaminase-like isoform 1 [Homo sapiens] Length = 328 Score = 30.4 bits (67), Expect = 6.3 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 7/75 (9%) Query: 182 EGERKMEKEELDVSVREEEV--SCSGPLSQKQA-----EFFLSQQASLLKNDETKALTPA 234 EG ++ ++E LD+ VR GPL K+ EFFLS + ++L D + T Sbjct: 127 EGIKQSKQENLDIDVRYLIAVDRRGGPLVAKETVKLAEEFFLSTEGTVLGLDLSGDPTIP 186 Query: 235 SLQKELNNLLKFNPD 249 + +KE LL PD Sbjct: 187 NQKKETQILLDLLPD 201 >gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sapiens] Length = 570 Score = 30.4 bits (67), Expect = 6.3 Identities = 17/62 (27%), Positives = 31/62 (50%) Query: 166 EKKTVEDADMELTSRDEGERKMEKEELDVSVREEEVSCSGPLSQKQAEFFLSQQASLLKN 225 EK+ E+ E R E E KM ++E + +EE++ + Q+Q E Q+ + + Sbjct: 364 EKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKIREQEEMMQEQEEKMGEQEEKMWEQ 423 Query: 226 DE 227 +E Sbjct: 424 EE 425 >gi|21359945 chromosome condensation protein G [Homo sapiens] Length = 1015 Score = 30.4 bits (67), Expect = 6.3 Identities = 15/41 (36%), Positives = 22/41 (53%) Query: 247 NPDFAEAHYLSYLNNLRVQDVFSSTHSLLHYFDRLILTGAE 287 N DFA H++ L L++ DV +L FD+L+ G E Sbjct: 615 NQDFARKHFVLLLQVLQIDDVTIKISALKAIFDQLMTFGIE 655 >gi|68077164 Yeast Sps1/Ste20-related kinase 4 isoform 1 [Homo sapiens] Length = 1328 Score = 30.4 bits (67), Expect = 6.3 Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 6/73 (8%) Query: 163 QNGEKKTVEDAD-MELTSRDEGERKMEKEELDV----SVREEEVSCSGPLSQKQAEFFLS 217 +N + K +E+ + +E+T ++G+ + E L +VREE++ C G ++K E S Sbjct: 306 ENWKSKEIEECNKIEITHFEKGQSLVSFENLKEGNIPAVREEDIDCHGSKTRKPEE-ENS 364 Query: 218 QQASLLKNDETKA 230 Q S KN+ + A Sbjct: 365 QYLSSRKNESSVA 377 >gi|221139761 zinc finger protein 853 [Homo sapiens] Length = 659 Score = 30.0 bits (66), Expect = 8.3 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 10/73 (13%) Query: 165 GEKKTVEDADMELTSRDEGERKMEKEELDVSVREEEVSCSGPLSQKQAEFFLSQQASLLK 224 G ++ +E EL + E ER+ E+ +L + ++EE +Q E L QQ L+ Sbjct: 330 GSEQELEQQRQELERQQELERQQEQRQLQLKLQEE---------LQQLEQQLEQQQQQLE 380 Query: 225 NDETK-ALTPASL 236 E + LTP L Sbjct: 381 QQEVQLELTPVEL 393 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.319 0.132 0.374 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,991,388 Number of Sequences: 37866 Number of extensions: 998976 Number of successful extensions: 3625 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 25 Number of HSP's that attempted gapping in prelim test: 3586 Number of HSP's gapped (non-prelim): 55 length of query: 755 length of database: 18,247,518 effective HSP length: 110 effective length of query: 645 effective length of database: 14,082,258 effective search space: 9083056410 effective search space used: 9083056410 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.