HDAC10 11823

Name: HDAC10	Sequence: fasta or formatted (669aa)		NCBI GI: 20070354
Description: histone deacetylase 10 isoform 1		Referenced in: Histones, Related Proteins, and Modifying Enzymes
Other entries for this name: alt prot [649aa] histone deacetylase 10 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.9 86 4 C cysteine 2.1 14 1 D aspartate 4.3 29 2 E glutamate 5.8 39 3 F phenylalanine 2.7 18 1 G glycine 8.7 58 2 H histidine 3.9 26 2 I isoleucine 1.9 13 1 K lysine 1.2 8 1 L leucine 14.9 100 3 M methionine 1.9 13 1 N asparagine 1.6 11 2 P proline 7.6 51 3 Q glutamine 5.5 37 3 R arginine 5.2 35 2 S serine 6.0 40 2 T threonine 3.6 24 2 V valine 7.0 47 2 W tryptophan 1.3 9 1 Y tyrosine 1.6 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 histone deacetylase 10 isoform 1 HDAC10 0.961 histone deacetylase 10 isoform 2 HDAC6 0.289 histone deacetylase 6 HDAC4 0.161 histone deacetylase 4 HDAC9 0.160 histone deacetylase 9 isoform 5 HDAC9 0.160 histone deacetylase 9 isoform 4 HDAC5 0.159 histone deacetylase 5 isoform 3 HDAC5 0.159 histone deacetylase 5 isoform 1 HDAC7 0.157 histone deacetylase 7 isoform d HDAC7 0.157 histone deacetylase 7 isoform a HDAC9 0.152 histone deacetylase 9 isoform 1 HDAC9 0.087 histone deacetylase 9 isoform 2 HDAC1 0.054 histone deacetylase 1 HDAC2 0.053 histone deacetylase 2 HDAC8 0.051 histone deacetylase 8 HDAC3 0.039 histone deacetylase 3 HDAC11 0.033 histone deacetylase 11 isoform 1 HDAC11 0.027 histone deacetylase 11 isoform 2 MUC7 0.017 mucin 7, secreted precursor MUC7 0.017 mucin 7, secreted precursor MUC7 0.017 mucin 7, secreted precursor FLJ22184 0.012 PREDICTED: hypothetical protein FLJ22184 AATK 0.011 apoptosis-associated tyrosine kinase LOC100131102 0.011 PREDICTED: hypothetical protein FLJ22184 0.011 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.011 PREDICTED: hypothetical protein LOC80164 GLTSCR1 0.011 glioma tumor suppressor candidate region gene 1 [Ho... PCLO 0.011 piccolo isoform 2 PCLO 0.011 piccolo isoform 1 MUC2 0.009 mucin 2 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.