Guide to the Human Genome
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Name: NEK6 Sequence: fasta or formatted (313aa) NCBI GI: 19923407
Description:

NIMA-related kinase 6 isoform 2

Referenced in:

Dual-Specificity Protein Kinases

Other entries for this name:
alt prot [347aa] NIMA-related kinase 6 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         16           2
 C cysteine            3.2         10           1
 D aspartate           5.1         16           1
 E glutamate           5.4         17           1
 F phenylalanine       4.2         13           2
 G glycine             6.1         19           2
 H histidine           4.8         15           1
 I isoleucine          5.8         18           2
 K lysine              7.0         22           2
 L leucine             9.6         30           2
 M methionine          4.2         13           2
 N asparagine          3.5         11           2
 P proline             6.1         19           2
 Q glutamine           5.1         16           1
 R arginine            4.5         14           2
 S serine              6.7         21           2
 T threonine           3.5         11           2
 V valine              5.4         17           2
 W tryptophan          1.0          3           1
 Y tyrosine            3.8         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NIMA-related kinase 6 isoform 2 
NEK6                  1.000   NIMA-related kinase 6 isoform 1 
NEK7                  0.736   NIMA-related kinase 7 
NEK1                  0.254   NIMA-related kinase 1 
NEK4                  0.250   NIMA-related kinase 4 
NEK5                  0.250   NIMA-related kinase 5 
NEK8                  0.240   NIMA-related kinase 8 
NEK3                  0.238   NIMA-related kinase 3 isoform b 
NEK3                  0.238   NIMA-related kinase 3 isoform a 
NEK3                  0.238   NIMA-related kinase 3 isoform a 
NEK2                  0.235   NIMA-related kinase 2 
NEK11                 0.226   NIMA-related kinase 11 isoform 2 
NEK11                 0.226   NIMA-related kinase 11 isoform 3 
NEK11                 0.226   NIMA-related kinase 11 isoform 1 
NEK9                  0.226   NIMA-related kinase 9 
STK36                 0.194   serine/threonine kinase 36 
YSK4                  0.189   Yeast Sps1/Ste20-related kinase 4 isoform 1 
YSK4                  0.189   Yeast Sps1/Ste20-related kinase 4 isoform 2 
TAOK2                 0.176   TAO kinase 2 isoform 1 
TAOK2                 0.176   TAO kinase 2 isoform 2 
TAOK3                 0.172   TAO kinase 3 
STK24                 0.169   serine/threonine kinase 24 isoform a 
TAOK1                 0.169   TAO kinase 1 
STK25                 0.169   serine/threonine kinase 25 
STK24                 0.167   serine/threonine kinase 24 isoform b 
CDK2                  0.165   cyclin-dependent kinase 2 isoform 1 
STK4                  0.165   serine/threonine kinase 4 
MAP3K4                0.165   mitogen-activated protein kinase kinase kinase 4 iso...
MAP3K4                0.165   mitogen-activated protein kinase kinase kinase 4 iso...
OXSR1                 0.164   oxidative-stress responsive 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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