Guide to the Human Genome
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Name: YSK4 Sequence: fasta or formatted (510aa) NCBI GI: 63998898
Description:

Yeast Sps1/Ste20-related kinase 4 isoform 2

Referenced in:

MAP Kinase Pathways

Other entries for this name:
alt prot [1328aa] Yeast Sps1/Ste20-related kinase 4 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         25           2
 C cysteine            2.2         11           1
 D aspartate           4.3         22           1
 E glutamate           8.8         45           3
 F phenylalanine       3.3         17           1
 G glycine             5.9         30           2
 H histidine           3.5         18           1
 I isoleucine          5.7         29           2
 K lysine              6.5         33           3
 L leucine             9.8         50           2
 M methionine          3.7         19           1
 N asparagine          4.3         22           2
 P proline             4.9         25           2
 Q glutamine           4.1         21           2
 R arginine            5.3         27           2
 S serine              9.4         48           2
 T threonine           4.9         25           1
 V valine              5.1         26           2
 W tryptophan          1.2          6           1
 Y tyrosine            2.2         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Yeast Sps1/Ste20-related kinase 4 isoform 2 
YSK4                  0.594   Yeast Sps1/Ste20-related kinase 4 isoform 1 
MAP3K3                0.212   mitogen-activated protein kinase kinase kinase 3 iso...
MAP3K3                0.212   mitogen-activated protein kinase kinase kinase 3 iso...
MAP3K2                0.208   mitogen-activated protein kinase kinase kinase 2 [Ho...
MAP3K15               0.174   mitogen-activated protein kinase kinase kinase 15 [...
MAP3K5                0.167   mitogen-activated protein kinase kinase kinase 5 [Hom...
MAP3K6                0.160   mitogen-activated protein kinase kinase kinase 6 [Ho...
MAP3K1                0.158   mitogen-activated protein kinase kinase kinase 1 [H...
STK24                 0.149   serine/threonine kinase 24 isoform b 
STK24                 0.149   serine/threonine kinase 24 isoform a 
MST4                  0.148   serine/threonine protein kinase MST4 isoform 1 [Homo...
STK25                 0.145   serine/threonine kinase 25 
MAP3K4                0.145   mitogen-activated protein kinase kinase kinase 4 iso...
MAP3K4                0.145   mitogen-activated protein kinase kinase kinase 4 iso...
MAP4K3                0.142   mitogen-activated protein kinase kinase kinase kinas...
STK4                  0.140   serine/threonine kinase 4 
MAP4K5                0.139   mitogen-activated protein kinase kinase kinase kinas...
MAP4K5                0.139   mitogen-activated protein kinase kinase kinase kinas...
STK3                  0.138   serine/threonine kinase 3 
TAOK2                 0.134   TAO kinase 2 isoform 1 
TAOK2                 0.134   TAO kinase 2 isoform 2 
PAK2                  0.133   p21-activated kinase 2 
TAOK1                 0.133   TAO kinase 1 
TAOK3                 0.133   TAO kinase 3 
PAK3                  0.132   p21-activated kinase 3 isoform d 
PAK3                  0.132   p21-activated kinase 3 isoform c 
PAK3                  0.132   p21-activated kinase 3 isoform b 
PAK3                  0.132   p21-activated kinase 3 isoform a 
PAK3                  0.132   p21-activated kinase 3 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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