NOTO 11451

Name: NOTO	Sequence: fasta or formatted (251aa)		NCBI GI: 197333837
Description: notochord homeobox		Referenced in: Homeobox and Related Proteins Left-Right Axis
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.0 30 2 C cysteine 2.4 6 1 D aspartate 3.2 8 2 E glutamate 5.2 13 2 F phenylalanine 3.6 9 1 G glycine 7.2 18 2 H histidine 1.2 3 1 I isoleucine 1.2 3 1 K lysine 3.6 9 2 L leucine 8.0 20 2 M methionine 0.8 2 1 N asparagine 2.0 5 1 P proline 12.4 31 3 Q glutamine 5.2 13 2 R arginine 8.0 20 2 S serine 10.0 25 4 T threonine 4.4 11 1 V valine 6.4 16 1 W tryptophan 2.4 6 1 Y tyrosine 1.2 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 notochord homeobox PHOX2B 0.103 paired-like homeobox 2b NKX6-1 0.103 NK6 transcription factor related, locus 1 EMX1 0.099 empty spiracles homolog 1 PHOX2A 0.097 paired-like homeobox 2a ALX3 0.097 aristaless-like homeobox 3 ISX 0.095 intestine-specific homeobox EMX2 0.095 empty spiracles homeobox 2 ALX4 0.091 aristaless-like homeobox 4 NKX3-2 0.087 NK3 homeobox 2 OTP 0.087 PREDICTED: orthopedia homeobox ARX 0.087 aristaless related homeobox OTP 0.087 orthopedia homeobox HOXA3 0.085 homeobox A3 isoform b HOXA3 0.085 homeobox A3 isoform a HOXA3 0.085 homeobox A3 isoform a HOXD3 0.085 homeobox D3 PRRX1 0.085 paired mesoderm homeobox 1 isoform pmx-1a PRRX1 0.085 paired mesoderm homeobox 1 isoform pmx-1b PAX7 0.083 paired box 7 isoform 1 PAX7 0.083 paired box 7 isoform 2 PAX7 0.083 paired box 7 isoform 3 VAX2 0.083 ventral anterior homeobox 2 VAX1 0.083 ventral anterior homeobox 1 isoform a SHOX2 0.081 short stature homeobox 2 isoform a SHOX2 0.081 short stature homeobox 2 isoform b HOXC13 0.081 homeobox C13 PAX3 0.081 paired box 3 isoform PAX3i PAX3 0.081 paired box 3 isoform PAX3g PAX3 0.081 paired box 3 isoform PAX3h Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.