BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|194328687 storkhead box 1 isoform b [Homo sapiens] (227 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|194328687 storkhead box 1 isoform b [Homo sapiens] 455 e-128 gi|194328691 storkhead box 1 isoform a [Homo sapiens] 443 e-125 gi|63025200 storkhead box 1 isoform a [Homo sapiens] 443 e-125 gi|194328689 storkhead box 1 isoform c [Homo sapiens] 312 1e-85 gi|194328693 storkhead box 1 isoform d [Homo sapiens] 225 3e-59 gi|55742730 storkhead box 2 [Homo sapiens] 129 3e-30 gi|29171705 melanoma antigen family D, 2 [Homo sapiens] 34 0.12 gi|19387846 melanoma antigen family D, 2 [Homo sapiens] 34 0.12 gi|41350320 melanoma antigen family D, 2 [Homo sapiens] 34 0.12 gi|110611172 amnionless protein precursor [Homo sapiens] 32 0.45 gi|239755540 PREDICTED: hypothetical protein [Homo sapiens] 28 4.9 gi|239755457 PREDICTED: similar to patatin-like phospholipase do... 28 4.9 gi|239749992 PREDICTED: hypothetical protein [Homo sapiens] 28 4.9 gi|239744303 PREDICTED: hypothetical protein XP_002343093 [Homo ... 28 4.9 gi|169169855 PREDICTED: similar to hCG34808 [Homo sapiens] 28 6.4 gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ... 28 6.4 gi|169168879 PREDICTED: similar to hCG34808 [Homo sapiens] 28 6.4 gi|169169326 PREDICTED: similar to hCG34808 [Homo sapiens] 28 6.4 gi|32698724 patatin-like phospholipase domain containing 2 [Homo... 28 6.4 gi|215422401 hypothetical protein LOC9811 isoform 2 [Homo sapiens] 28 6.4 gi|7662112 hypothetical protein LOC9811 isoform 1 [Homo sapiens] 28 6.4 gi|31542713 MOCO sulphurase C-terminal domain containing 2 [Homo... 28 6.4 >gi|194328687 storkhead box 1 isoform b [Homo sapiens] Length = 227 Score = 455 bits (1170), Expect = e-128 Identities = 227/227 (100%), Positives = 227/227 (100%) Query: 1 MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL 60 MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL Sbjct: 1 MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL 60 Query: 61 AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV 120 AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV Sbjct: 61 AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV 120 Query: 121 PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGTLIKERKIYHT 180 PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGTLIKERKIYHT Sbjct: 121 PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGTLIKERKIYHT 180 Query: 181 GEGYFIVTPQTYFITNTTTQENKRMLPSDESRLMPASMTYLDTESGI 227 GEGYFIVTPQTYFITNTTTQENKRMLPSDESRLMPASMTYLDTESGI Sbjct: 181 GEGYFIVTPQTYFITNTTTQENKRMLPSDESRLMPASMTYLDTESGI 227 >gi|194328691 storkhead box 1 isoform a [Homo sapiens] Length = 989 Score = 443 bits (1140), Expect = e-125 Identities = 221/221 (100%), Positives = 221/221 (100%) Query: 1 MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL 60 MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL Sbjct: 1 MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL 60 Query: 61 AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV 120 AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV Sbjct: 61 AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV 120 Query: 121 PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGTLIKERKIYHT 180 PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGTLIKERKIYHT Sbjct: 121 PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGTLIKERKIYHT 180 Query: 181 GEGYFIVTPQTYFITNTTTQENKRMLPSDESRLMPASMTYL 221 GEGYFIVTPQTYFITNTTTQENKRMLPSDESRLMPASMTYL Sbjct: 181 GEGYFIVTPQTYFITNTTTQENKRMLPSDESRLMPASMTYL 221 >gi|63025200 storkhead box 1 isoform a [Homo sapiens] Length = 989 Score = 443 bits (1140), Expect = e-125 Identities = 221/221 (100%), Positives = 221/221 (100%) Query: 1 MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL 60 MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL Sbjct: 1 MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL 60 Query: 61 AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV 120 AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV Sbjct: 61 AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV 120 Query: 121 PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGTLIKERKIYHT 180 PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGTLIKERKIYHT Sbjct: 121 PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGTLIKERKIYHT 180 Query: 181 GEGYFIVTPQTYFITNTTTQENKRMLPSDESRLMPASMTYL 221 GEGYFIVTPQTYFITNTTTQENKRMLPSDESRLMPASMTYL Sbjct: 181 GEGYFIVTPQTYFITNTTTQENKRMLPSDESRLMPASMTYL 221 >gi|194328689 storkhead box 1 isoform c [Homo sapiens] Length = 169 Score = 312 bits (800), Expect = 1e-85 Identities = 155/155 (100%), Positives = 155/155 (100%) Query: 1 MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL 60 MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL Sbjct: 1 MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL 60 Query: 61 AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV 120 AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV Sbjct: 61 AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV 120 Query: 121 PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPG 155 PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPG Sbjct: 121 PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPG 155 >gi|194328693 storkhead box 1 isoform d [Homo sapiens] Length = 879 Score = 225 bits (573), Expect = 3e-59 Identities = 111/111 (100%), Positives = 111/111 (100%) Query: 111 MNPITQSQFVPLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGT 170 MNPITQSQFVPLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGT Sbjct: 1 MNPITQSQFVPLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGT 60 Query: 171 LIKERKIYHTGEGYFIVTPQTYFITNTTTQENKRMLPSDESRLMPASMTYL 221 LIKERKIYHTGEGYFIVTPQTYFITNTTTQENKRMLPSDESRLMPASMTYL Sbjct: 61 LIKERKIYHTGEGYFIVTPQTYFITNTTTQENKRMLPSDESRLMPASMTYL 111 >gi|55742730 storkhead box 2 [Homo sapiens] Length = 926 Score = 129 bits (323), Expect = 3e-30 Identities = 62/107 (57%), Positives = 81/107 (75%) Query: 104 GDVFPVQMNPITQSQFVPLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDI 163 GDV P+ M+PI+QSQF+PLGE+LC AIS MN+A+ VTQE+L+E L +PG+ PS++I Sbjct: 56 GDVSPISMSPISQSQFIPLGEILCLAISAMNSARKPVTQEALMEHLTTCFPGVPTPSQEI 115 Query: 164 LYTTLGTLIKERKIYHTGEGYFIVTPQTYFITNTTTQENKRMLPSDE 210 L TL TL++ERKIY T +GYFIVTPQTYFIT + + N + DE Sbjct: 116 LRHTLNTLVRERKIYPTPDGYFIVTPQTYFITPSLIRTNSKWYHLDE 162 >gi|29171705 melanoma antigen family D, 2 [Homo sapiens] Length = 606 Score = 33.9 bits (76), Expect = 0.12 Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 15/74 (20%) Query: 27 AAEEPGGRAVFRAFRRANAR-------CFWNARLARAASRLAFQGWLRRGVLLVRAPPAC 79 A+ GGR V +A + AR FW AR ASR W RR +L +R+P A Sbjct: 196 ASGTTGGRRVSKALMASMARRASRGPIAFW----ARRASRTRLAAWARRALLSLRSPKA- 250 Query: 80 LQVLRDAWRRRALR 93 R RRRA + Sbjct: 251 ---RRGKARRRAAK 261 >gi|19387846 melanoma antigen family D, 2 [Homo sapiens] Length = 606 Score = 33.9 bits (76), Expect = 0.12 Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 15/74 (20%) Query: 27 AAEEPGGRAVFRAFRRANAR-------CFWNARLARAASRLAFQGWLRRGVLLVRAPPAC 79 A+ GGR V +A + AR FW AR ASR W RR +L +R+P A Sbjct: 196 ASGTTGGRRVSKALMASMARRASRGPIAFW----ARRASRTRLAAWARRALLSLRSPKA- 250 Query: 80 LQVLRDAWRRRALR 93 R RRRA + Sbjct: 251 ---RRGKARRRAAK 261 >gi|41350320 melanoma antigen family D, 2 [Homo sapiens] Length = 606 Score = 33.9 bits (76), Expect = 0.12 Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 15/74 (20%) Query: 27 AAEEPGGRAVFRAFRRANAR-------CFWNARLARAASRLAFQGWLRRGVLLVRAPPAC 79 A+ GGR V +A + AR FW AR ASR W RR +L +R+P A Sbjct: 196 ASGTTGGRRVSKALMASMARRASRGPIAFW----ARRASRTRLAAWARRALLSLRSPKA- 250 Query: 80 LQVLRDAWRRRALR 93 R RRRA + Sbjct: 251 ---RRGKARRRAAK 261 >gi|110611172 amnionless protein precursor [Homo sapiens] Length = 453 Score = 32.0 bits (71), Expect = 0.45 Identities = 33/105 (31%), Positives = 40/105 (38%), Gaps = 6/105 (5%) Query: 18 RLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRLAFQGWLRRGVLLVRAPP 77 RL A AE V A R + W + A A +A L VLLV APP Sbjct: 323 RLARALLADVAENGEALGVLEATMRESGAHVWGSSAAGLAGGVAAAVLLALLVLLV-APP 381 Query: 78 ACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFVPL 122 + R WRR P G + VF V T S+ +PL Sbjct: 382 LLRRAGRLRWRRHEAAAPAGAPLGFRNPVFDV-----TASEELPL 421 >gi|239755540 PREDICTED: hypothetical protein [Homo sapiens] Length = 170 Score = 28.5 bits (62), Expect = 4.9 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 5/79 (6%) Query: 78 ACLQVLRDAWRRRALRPPR-----GFRIRAVGDVFPVQMNPITQSQFVPLGEVLCCAISD 132 ACL + +AW R R P+ G RAV P+ M P Q P G A + Sbjct: 76 ACLSIPPEAWSSRRSRHPQAVTAAGEATRAVVGWLPMDMCPSPTWQDPPRGRAFHRAENR 135 Query: 133 MNTAQIVVTQESLLERLMK 151 + V Q SL+ +++ Sbjct: 136 QRRNSLEVAQISLVAPVLQ 154 >gi|239755457 PREDICTED: similar to patatin-like phospholipase domain containing 2 [Homo sapiens] Length = 226 Score = 28.5 bits (62), Expect = 4.9 Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 5/75 (6%) Query: 53 LARAASRLAFQGWLRR----GVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFP 108 L+ AA R A GW+R G L + Q+L + PP R+RA D P Sbjct: 132 LSCAAYREALPGWMRNNLSLGDALAKWEECQRQLLLGLFCTNVAFPPEALRMRAPADPAP 191 Query: 109 VQMNPITQSQFVPLG 123 +P Q P G Sbjct: 192 APADP-ASPQHQPAG 205 >gi|239749992 PREDICTED: hypothetical protein [Homo sapiens] Length = 170 Score = 28.5 bits (62), Expect = 4.9 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 5/79 (6%) Query: 78 ACLQVLRDAWRRRALRPPR-----GFRIRAVGDVFPVQMNPITQSQFVPLGEVLCCAISD 132 ACL + +AW R R P+ G RAV P+ M P Q P G A + Sbjct: 76 ACLSIPPEAWSSRRSRHPQAVTAAGEATRAVVGWLPMDMCPSPTWQDPPRGRAFHRAENR 135 Query: 133 MNTAQIVVTQESLLERLMK 151 + V Q SL+ +++ Sbjct: 136 QRRNSLEVAQISLVAPVLQ 154 >gi|239744303 PREDICTED: hypothetical protein XP_002343093 [Homo sapiens] Length = 170 Score = 28.5 bits (62), Expect = 4.9 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 5/79 (6%) Query: 78 ACLQVLRDAWRRRALRPPR-----GFRIRAVGDVFPVQMNPITQSQFVPLGEVLCCAISD 132 ACL + +AW R R P+ G RAV P+ M P Q P G A + Sbjct: 76 ACLSIPPEAWSSRRSRHPQAVTAAGEATRAVVGWLPMDMCPSPTWQDPPRGRAFHRAENR 135 Query: 133 MNTAQIVVTQESLLERLMK 151 + V Q SL+ +++ Sbjct: 136 QRRNSLEVAQISLVAPVLQ 154 >gi|169169855 PREDICTED: similar to hCG34808 [Homo sapiens] Length = 483 Score = 28.1 bits (61), Expect = 6.4 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 130 ISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGTLIKERKIYHTG 181 ++++NT Q T +SL + K++ IP +G L K+R IYH G Sbjct: 88 LAELNTCQRQETADSLDNKKKKYFSLEEIPKSSKTVFIIGNLQKKR-IYHLG 138 >gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo sapiens] Length = 935 Score = 28.1 bits (61), Expect = 6.4 Identities = 28/85 (32%), Positives = 34/85 (40%), Gaps = 7/85 (8%) Query: 18 RLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRLAFQGWLRRGVLLVRA-- 75 +L G A GR V R R A + RAASR A +G RR + A Sbjct: 796 KLTDSARGGRARLTAGRRVRRESGRRRAGATSQGAIRRAASR-ARKGESRRPLPANSAGR 854 Query: 76 ----PPACLQVLRDAWRRRALRPPR 96 PA + R +W RA RP R Sbjct: 855 PALPSPAAARSARGSWGLRASRPSR 879 >gi|169168879 PREDICTED: similar to hCG34808 [Homo sapiens] Length = 483 Score = 28.1 bits (61), Expect = 6.4 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 130 ISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGTLIKERKIYHTG 181 ++++NT Q T +SL + K++ IP +G L K+R IYH G Sbjct: 88 LAELNTCQRQETADSLDNKKKKYFSLEEIPKSSKTVFIIGNLQKKR-IYHLG 138 >gi|169169326 PREDICTED: similar to hCG34808 [Homo sapiens] Length = 483 Score = 28.1 bits (61), Expect = 6.4 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 130 ISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGTLIKERKIYHTG 181 ++++NT Q T +SL + K++ IP +G L K+R IYH G Sbjct: 88 LAELNTCQRQETADSLDNKKKKYFSLEEIPKSSKTVFIIGNLQKKR-IYHLG 138 >gi|32698724 patatin-like phospholipase domain containing 2 [Homo sapiens] Length = 504 Score = 28.1 bits (61), Expect = 6.4 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 4/65 (6%) Query: 53 LARAASRLAFQGWLRR----GVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFP 108 L+ AA R A GW+R G L + Q+L + PP R+RA D P Sbjct: 410 LSCAAYREALPGWMRNNLSLGDALAKWEECQRQLLLGLFCTNVAFPPEALRMRAPADPAP 469 Query: 109 VQMNP 113 +P Sbjct: 470 APADP 474 >gi|215422401 hypothetical protein LOC9811 isoform 2 [Homo sapiens] Length = 600 Score = 28.1 bits (61), Expect = 6.4 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 9/76 (11%) Query: 102 AVGDVFPVQMNPI-------TQSQFVPLGEVLCCAISDMNTAQIVVTQ--ESLLERLMKH 152 + G+ F V + PI QSQ V VLCC++ +T +++ Q E + E L Sbjct: 493 STGEPFRVLVCPIYTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQLPEMMTELLASA 552 Query: 153 YPGIAIPSEDILYTTL 168 + PSE +L +L Sbjct: 553 RDKMLCPSESMLTRSL 568 >gi|7662112 hypothetical protein LOC9811 isoform 1 [Homo sapiens] Length = 598 Score = 28.1 bits (61), Expect = 6.4 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 9/76 (11%) Query: 102 AVGDVFPVQMNPI-------TQSQFVPLGEVLCCAISDMNTAQIVVTQ--ESLLERLMKH 152 + G+ F V + PI QSQ V VLCC++ +T +++ Q E + E L Sbjct: 491 STGEPFRVLVCPIYTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQLPEMMTELLASA 550 Query: 153 YPGIAIPSEDILYTTL 168 + PSE +L +L Sbjct: 551 RDKMLCPSESMLTRSL 566 >gi|31542713 MOCO sulphurase C-terminal domain containing 2 [Homo sapiens] Length = 335 Score = 28.1 bits (61), Expect = 6.4 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Query: 86 AWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFVPLGEVLCCAI 130 AWRR P R R++ VG V + + P+ + VP+ E C A+ Sbjct: 39 AWRRAW--PRRRRRLQQVGTVAKLWIYPVKSCKGVPVSEAECTAM 81 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.325 0.137 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,544,054 Number of Sequences: 37866 Number of extensions: 346311 Number of successful extensions: 1003 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 993 Number of HSP's gapped (non-prelim): 24 length of query: 227 length of database: 18,247,518 effective HSP length: 99 effective length of query: 128 effective length of database: 14,498,784 effective search space: 1855844352 effective search space used: 1855844352 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.