Guide to the Human Genome
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Search of human proteins with 194328687

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|194328687 storkhead box 1 isoform b [Homo sapiens]
         (227 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|194328687 storkhead box 1 isoform b [Homo sapiens]                 455   e-128
gi|194328691 storkhead box 1 isoform a [Homo sapiens]                 443   e-125
gi|63025200 storkhead box 1 isoform a [Homo sapiens]                  443   e-125
gi|194328689 storkhead box 1 isoform c [Homo sapiens]                 312   1e-85
gi|194328693 storkhead box 1 isoform d [Homo sapiens]                 225   3e-59
gi|55742730 storkhead box 2 [Homo sapiens]                            129   3e-30
gi|29171705 melanoma antigen family D, 2 [Homo sapiens]                34   0.12 
gi|19387846 melanoma antigen family D, 2 [Homo sapiens]                34   0.12 
gi|41350320 melanoma antigen family D, 2 [Homo sapiens]                34   0.12 
gi|110611172 amnionless protein precursor [Homo sapiens]               32   0.45 
gi|239755540 PREDICTED: hypothetical protein [Homo sapiens]            28   4.9  
gi|239755457 PREDICTED: similar to patatin-like phospholipase do...    28   4.9  
gi|239749992 PREDICTED: hypothetical protein [Homo sapiens]            28   4.9  
gi|239744303 PREDICTED: hypothetical protein XP_002343093 [Homo ...    28   4.9  
gi|169169855 PREDICTED: similar to hCG34808 [Homo sapiens]             28   6.4  
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ...    28   6.4  
gi|169168879 PREDICTED: similar to hCG34808 [Homo sapiens]             28   6.4  
gi|169169326 PREDICTED: similar to hCG34808 [Homo sapiens]             28   6.4  
gi|32698724 patatin-like phospholipase domain containing 2 [Homo...    28   6.4  
gi|215422401 hypothetical protein LOC9811 isoform 2 [Homo sapiens]     28   6.4  
gi|7662112 hypothetical protein LOC9811 isoform 1 [Homo sapiens]       28   6.4  
gi|31542713 MOCO sulphurase C-terminal domain containing 2 [Homo...    28   6.4  

>gi|194328687 storkhead box 1 isoform b [Homo sapiens]
          Length = 227

 Score =  455 bits (1170), Expect = e-128
 Identities = 227/227 (100%), Positives = 227/227 (100%)

Query: 1   MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL 60
           MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL
Sbjct: 1   MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL 60

Query: 61  AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV 120
           AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV
Sbjct: 61  AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV 120

Query: 121 PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGTLIKERKIYHT 180
           PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGTLIKERKIYHT
Sbjct: 121 PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGTLIKERKIYHT 180

Query: 181 GEGYFIVTPQTYFITNTTTQENKRMLPSDESRLMPASMTYLDTESGI 227
           GEGYFIVTPQTYFITNTTTQENKRMLPSDESRLMPASMTYLDTESGI
Sbjct: 181 GEGYFIVTPQTYFITNTTTQENKRMLPSDESRLMPASMTYLDTESGI 227


>gi|194328691 storkhead box 1 isoform a [Homo sapiens]
          Length = 989

 Score =  443 bits (1140), Expect = e-125
 Identities = 221/221 (100%), Positives = 221/221 (100%)

Query: 1   MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL 60
           MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL
Sbjct: 1   MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL 60

Query: 61  AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV 120
           AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV
Sbjct: 61  AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV 120

Query: 121 PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGTLIKERKIYHT 180
           PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGTLIKERKIYHT
Sbjct: 121 PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGTLIKERKIYHT 180

Query: 181 GEGYFIVTPQTYFITNTTTQENKRMLPSDESRLMPASMTYL 221
           GEGYFIVTPQTYFITNTTTQENKRMLPSDESRLMPASMTYL
Sbjct: 181 GEGYFIVTPQTYFITNTTTQENKRMLPSDESRLMPASMTYL 221


>gi|63025200 storkhead box 1 isoform a [Homo sapiens]
          Length = 989

 Score =  443 bits (1140), Expect = e-125
 Identities = 221/221 (100%), Positives = 221/221 (100%)

Query: 1   MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL 60
           MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL
Sbjct: 1   MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL 60

Query: 61  AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV 120
           AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV
Sbjct: 61  AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV 120

Query: 121 PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGTLIKERKIYHT 180
           PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGTLIKERKIYHT
Sbjct: 121 PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGTLIKERKIYHT 180

Query: 181 GEGYFIVTPQTYFITNTTTQENKRMLPSDESRLMPASMTYL 221
           GEGYFIVTPQTYFITNTTTQENKRMLPSDESRLMPASMTYL
Sbjct: 181 GEGYFIVTPQTYFITNTTTQENKRMLPSDESRLMPASMTYL 221


>gi|194328689 storkhead box 1 isoform c [Homo sapiens]
          Length = 169

 Score =  312 bits (800), Expect = 1e-85
 Identities = 155/155 (100%), Positives = 155/155 (100%)

Query: 1   MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL 60
           MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL
Sbjct: 1   MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRL 60

Query: 61  AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV 120
           AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV
Sbjct: 61  AFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFV 120

Query: 121 PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPG 155
           PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPG
Sbjct: 121 PLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPG 155


>gi|194328693 storkhead box 1 isoform d [Homo sapiens]
          Length = 879

 Score =  225 bits (573), Expect = 3e-59
 Identities = 111/111 (100%), Positives = 111/111 (100%)

Query: 111 MNPITQSQFVPLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGT 170
           MNPITQSQFVPLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGT
Sbjct: 1   MNPITQSQFVPLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGT 60

Query: 171 LIKERKIYHTGEGYFIVTPQTYFITNTTTQENKRMLPSDESRLMPASMTYL 221
           LIKERKIYHTGEGYFIVTPQTYFITNTTTQENKRMLPSDESRLMPASMTYL
Sbjct: 61  LIKERKIYHTGEGYFIVTPQTYFITNTTTQENKRMLPSDESRLMPASMTYL 111


>gi|55742730 storkhead box 2 [Homo sapiens]
          Length = 926

 Score =  129 bits (323), Expect = 3e-30
 Identities = 62/107 (57%), Positives = 81/107 (75%)

Query: 104 GDVFPVQMNPITQSQFVPLGEVLCCAISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDI 163
           GDV P+ M+PI+QSQF+PLGE+LC AIS MN+A+  VTQE+L+E L   +PG+  PS++I
Sbjct: 56  GDVSPISMSPISQSQFIPLGEILCLAISAMNSARKPVTQEALMEHLTTCFPGVPTPSQEI 115

Query: 164 LYTTLGTLIKERKIYHTGEGYFIVTPQTYFITNTTTQENKRMLPSDE 210
           L  TL TL++ERKIY T +GYFIVTPQTYFIT +  + N +    DE
Sbjct: 116 LRHTLNTLVRERKIYPTPDGYFIVTPQTYFITPSLIRTNSKWYHLDE 162


>gi|29171705 melanoma antigen family D, 2 [Homo sapiens]
          Length = 606

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 15/74 (20%)

Query: 27  AAEEPGGRAVFRAFRRANAR-------CFWNARLARAASRLAFQGWLRRGVLLVRAPPAC 79
           A+   GGR V +A   + AR        FW    AR ASR     W RR +L +R+P A 
Sbjct: 196 ASGTTGGRRVSKALMASMARRASRGPIAFW----ARRASRTRLAAWARRALLSLRSPKA- 250

Query: 80  LQVLRDAWRRRALR 93
               R   RRRA +
Sbjct: 251 ---RRGKARRRAAK 261


>gi|19387846 melanoma antigen family D, 2 [Homo sapiens]
          Length = 606

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 15/74 (20%)

Query: 27  AAEEPGGRAVFRAFRRANAR-------CFWNARLARAASRLAFQGWLRRGVLLVRAPPAC 79
           A+   GGR V +A   + AR        FW    AR ASR     W RR +L +R+P A 
Sbjct: 196 ASGTTGGRRVSKALMASMARRASRGPIAFW----ARRASRTRLAAWARRALLSLRSPKA- 250

Query: 80  LQVLRDAWRRRALR 93
               R   RRRA +
Sbjct: 251 ---RRGKARRRAAK 261


>gi|41350320 melanoma antigen family D, 2 [Homo sapiens]
          Length = 606

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 15/74 (20%)

Query: 27  AAEEPGGRAVFRAFRRANAR-------CFWNARLARAASRLAFQGWLRRGVLLVRAPPAC 79
           A+   GGR V +A   + AR        FW    AR ASR     W RR +L +R+P A 
Sbjct: 196 ASGTTGGRRVSKALMASMARRASRGPIAFW----ARRASRTRLAAWARRALLSLRSPKA- 250

Query: 80  LQVLRDAWRRRALR 93
               R   RRRA +
Sbjct: 251 ---RRGKARRRAAK 261


>gi|110611172 amnionless protein precursor [Homo sapiens]
          Length = 453

 Score = 32.0 bits (71), Expect = 0.45
 Identities = 33/105 (31%), Positives = 40/105 (38%), Gaps = 6/105 (5%)

Query: 18  RLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRLAFQGWLRRGVLLVRAPP 77
           RL     A  AE      V  A  R +    W +  A  A  +A    L   VLLV APP
Sbjct: 323 RLARALLADVAENGEALGVLEATMRESGAHVWGSSAAGLAGGVAAAVLLALLVLLV-APP 381

Query: 78  ACLQVLRDAWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFVPL 122
              +  R  WRR     P G  +     VF V     T S+ +PL
Sbjct: 382 LLRRAGRLRWRRHEAAAPAGAPLGFRNPVFDV-----TASEELPL 421


>gi|239755540 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 170

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 5/79 (6%)

Query: 78  ACLQVLRDAWRRRALRPPR-----GFRIRAVGDVFPVQMNPITQSQFVPLGEVLCCAISD 132
           ACL +  +AW  R  R P+     G   RAV    P+ M P    Q  P G     A + 
Sbjct: 76  ACLSIPPEAWSSRRSRHPQAVTAAGEATRAVVGWLPMDMCPSPTWQDPPRGRAFHRAENR 135

Query: 133 MNTAQIVVTQESLLERLMK 151
                + V Q SL+  +++
Sbjct: 136 QRRNSLEVAQISLVAPVLQ 154


>gi|239755457 PREDICTED: similar to patatin-like phospholipase
           domain containing 2 [Homo sapiens]
          Length = 226

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 5/75 (6%)

Query: 53  LARAASRLAFQGWLRR----GVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFP 108
           L+ AA R A  GW+R     G  L +      Q+L   +      PP   R+RA  D  P
Sbjct: 132 LSCAAYREALPGWMRNNLSLGDALAKWEECQRQLLLGLFCTNVAFPPEALRMRAPADPAP 191

Query: 109 VQMNPITQSQFVPLG 123
              +P    Q  P G
Sbjct: 192 APADP-ASPQHQPAG 205


>gi|239749992 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 170

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 5/79 (6%)

Query: 78  ACLQVLRDAWRRRALRPPR-----GFRIRAVGDVFPVQMNPITQSQFVPLGEVLCCAISD 132
           ACL +  +AW  R  R P+     G   RAV    P+ M P    Q  P G     A + 
Sbjct: 76  ACLSIPPEAWSSRRSRHPQAVTAAGEATRAVVGWLPMDMCPSPTWQDPPRGRAFHRAENR 135

Query: 133 MNTAQIVVTQESLLERLMK 151
                + V Q SL+  +++
Sbjct: 136 QRRNSLEVAQISLVAPVLQ 154


>gi|239744303 PREDICTED: hypothetical protein XP_002343093 [Homo
           sapiens]
          Length = 170

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 5/79 (6%)

Query: 78  ACLQVLRDAWRRRALRPPR-----GFRIRAVGDVFPVQMNPITQSQFVPLGEVLCCAISD 132
           ACL +  +AW  R  R P+     G   RAV    P+ M P    Q  P G     A + 
Sbjct: 76  ACLSIPPEAWSSRRSRHPQAVTAAGEATRAVVGWLPMDMCPSPTWQDPPRGRAFHRAENR 135

Query: 133 MNTAQIVVTQESLLERLMK 151
                + V Q SL+  +++
Sbjct: 136 QRRNSLEVAQISLVAPVLQ 154


>gi|169169855 PREDICTED: similar to hCG34808 [Homo sapiens]
          Length = 483

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 130 ISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGTLIKERKIYHTG 181
           ++++NT Q   T +SL  +  K++    IP        +G L K+R IYH G
Sbjct: 88  LAELNTCQRQETADSLDNKKKKYFSLEEIPKSSKTVFIIGNLQKKR-IYHLG 138


>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
           sapiens]
          Length = 935

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 28/85 (32%), Positives = 34/85 (40%), Gaps = 7/85 (8%)

Query: 18  RLEAQKAAGAAEEPGGRAVFRAFRRANARCFWNARLARAASRLAFQGWLRRGVLLVRA-- 75
           +L      G A    GR V R   R  A       + RAASR A +G  RR +    A  
Sbjct: 796 KLTDSARGGRARLTAGRRVRRESGRRRAGATSQGAIRRAASR-ARKGESRRPLPANSAGR 854

Query: 76  ----PPACLQVLRDAWRRRALRPPR 96
                PA  +  R +W  RA RP R
Sbjct: 855 PALPSPAAARSARGSWGLRASRPSR 879


>gi|169168879 PREDICTED: similar to hCG34808 [Homo sapiens]
          Length = 483

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 130 ISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGTLIKERKIYHTG 181
           ++++NT Q   T +SL  +  K++    IP        +G L K+R IYH G
Sbjct: 88  LAELNTCQRQETADSLDNKKKKYFSLEEIPKSSKTVFIIGNLQKKR-IYHLG 138


>gi|169169326 PREDICTED: similar to hCG34808 [Homo sapiens]
          Length = 483

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 130 ISDMNTAQIVVTQESLLERLMKHYPGIAIPSEDILYTTLGTLIKERKIYHTG 181
           ++++NT Q   T +SL  +  K++    IP        +G L K+R IYH G
Sbjct: 88  LAELNTCQRQETADSLDNKKKKYFSLEEIPKSSKTVFIIGNLQKKR-IYHLG 138


>gi|32698724 patatin-like phospholipase domain containing 2 [Homo
           sapiens]
          Length = 504

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 4/65 (6%)

Query: 53  LARAASRLAFQGWLRR----GVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRAVGDVFP 108
           L+ AA R A  GW+R     G  L +      Q+L   +      PP   R+RA  D  P
Sbjct: 410 LSCAAYREALPGWMRNNLSLGDALAKWEECQRQLLLGLFCTNVAFPPEALRMRAPADPAP 469

Query: 109 VQMNP 113
              +P
Sbjct: 470 APADP 474


>gi|215422401 hypothetical protein LOC9811 isoform 2 [Homo sapiens]
          Length = 600

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 9/76 (11%)

Query: 102 AVGDVFPVQMNPI-------TQSQFVPLGEVLCCAISDMNTAQIVVTQ--ESLLERLMKH 152
           + G+ F V + PI        QSQ V    VLCC++   +T +++  Q  E + E L   
Sbjct: 493 STGEPFRVLVCPIYTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQLPEMMTELLASA 552

Query: 153 YPGIAIPSEDILYTTL 168
              +  PSE +L  +L
Sbjct: 553 RDKMLCPSESMLTRSL 568


>gi|7662112 hypothetical protein LOC9811 isoform 1 [Homo sapiens]
          Length = 598

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 9/76 (11%)

Query: 102 AVGDVFPVQMNPI-------TQSQFVPLGEVLCCAISDMNTAQIVVTQ--ESLLERLMKH 152
           + G+ F V + PI        QSQ V    VLCC++   +T +++  Q  E + E L   
Sbjct: 491 STGEPFRVLVCPIYTCLRELLQSQDVKEDAVLCCSMELQSTGRLLEEQLPEMMTELLASA 550

Query: 153 YPGIAIPSEDILYTTL 168
              +  PSE +L  +L
Sbjct: 551 RDKMLCPSESMLTRSL 566


>gi|31542713 MOCO sulphurase C-terminal domain containing 2 [Homo
           sapiens]
          Length = 335

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 86  AWRRRALRPPRGFRIRAVGDVFPVQMNPITQSQFVPLGEVLCCAI 130
           AWRR    P R  R++ VG V  + + P+   + VP+ E  C A+
Sbjct: 39  AWRRAW--PRRRRRLQQVGTVAKLWIYPVKSCKGVPVSEAECTAM 81


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.137    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,544,054
Number of Sequences: 37866
Number of extensions: 346311
Number of successful extensions: 1003
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 993
Number of HSP's gapped (non-prelim): 24
length of query: 227
length of database: 18,247,518
effective HSP length: 99
effective length of query: 128
effective length of database: 14,498,784
effective search space: 1855844352
effective search space used: 1855844352
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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