Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: AMN Sequence: fasta or formatted (453aa) NCBI GI: 110611172
Description:

amnionless protein precursor

Referenced in:

Vitamin Pathways, Coenzymes, and 1-Carbon Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.1         64           3
 C cysteine            2.9         13           2
 D aspartate           5.5         25           2
 E glutamate           5.1         23           2
 F phenylalanine       4.2         19           2
 G glycine            10.2         46           2
 H histidine           2.6         12           1
 I isoleucine          0.9          4           1
 K lysine              0.9          4           1
 L leucine            12.6         57           2
 M methionine          0.9          4           1
 N asparagine          1.8          8           1
 P proline             7.1         32           2
 Q glutamine           2.6         12           1
 R arginine            7.7         35           2
 S serine              6.6         30           2
 T threonine           2.6         12           1
 V valine              9.3         42           2
 W tryptophan          1.8          8           1
 Y tyrosine            0.7          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   amnionless protein precursor 
LOC100292362          0.013   PREDICTED: hypothetical protein 
LOC100290531          0.013   PREDICTED: hypothetical protein XP_002347966 
LOC100288045          0.013   PREDICTED: hypothetical protein XP_002343660 
KAZALD1               0.008   Kazal-type serine peptidase inhibitor domain 1 precu...
STOX1                 0.008   storkhead box 1 isoform c 
STOX1                 0.008   storkhead box 1 isoform b 
STOX1                 0.008   storkhead box 1 isoform a 
STOX1                 0.008   storkhead box 1 isoform a 
LOC100294438          0.008   PREDICTED: hypothetical protein 
COL1A1                0.007   alpha 1 type I collagen preproprotein 
CYB5R2                0.007   cytochrome b5 reductase b5R.2 
FCRL4                 0.006   Fc receptor-like 4 precursor 
LOC644794             0.006   PREDICTED: hypothetical protein 
LOC644794             0.006   PREDICTED: hypothetical protein 
LOC644794             0.006   PREDICTED: hypothetical protein 
LOC644794             0.006   PREDICTED: hypothetical protein 
KCP                   0.006   cysteine rich BMP regulator 2 isoform 2 
KCP                   0.006   cysteine rich BMP regulator 2 isoform 1 
CEACAM4               0.006   carcinoembryonic antigen-related cell adhesion molec...
TMEM201               0.006   transmembrane protein 201 isoform 2 
TMEM201               0.006   transmembrane protein 201 isoform 1 
SNX14                 0.006   sorting nexin 14 isoform b 
SNX14                 0.006   sorting nexin 14 isoform a 
LOC100130897          0.004   PREDICTED: hypothetical protein 
LOC100130897          0.004   PREDICTED: hypothetical protein 
ECM2                  0.004   extracellular matrix protein 2 precursor 
GFRA4                 0.004   GDNF family receptor alpha 4 isoform a precursor [Ho...
GFRA4                 0.004   GDNF family receptor alpha 4 isoform b precursor [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press