LOC727900 1136

Name: LOC727900	Sequence: fasta or formatted (206aa)		NCBI GI: 113415439
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Other entries for this name: alt mRNA {206aa} PREDICTED: hypothetical protein alt prot {192aa} PREDICTED: hypothetical protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 1.5 3 1 C cysteine 1.0 2 1 D aspartate 4.9 10 1 E glutamate 0.0 0 0 F phenylalanine 5.3 11 2 G glycine 1.9 4 1 H histidine 10.2 21 1 I isoleucine 5.8 12 1 K lysine 1.5 3 1 L leucine 7.3 15 2 M methionine 3.4 7 1 N asparagine 1.5 3 1 P proline 14.6 30 2 Q glutamine 11.7 24 1 R arginine 1.0 2 1 S serine 13.1 27 4 T threonine 8.7 18 2 V valine 6.8 14 1 W tryptophan 0.0 0 0 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC727900 1.000 PREDICTED: hypothetical protein LOC727900 0.839 PREDICTED: hypothetical protein PLAC4 0.049 placenta-specific 4 HIVEP3 0.041 human immunodeficiency virus type I enhancer bindin... HIVEP3 0.041 human immunodeficiency virus type I enhancer bindin... LOC284297 0.037 hypothetical protein LOC284297 LOC100288786 0.037 PREDICTED: hypothetical protein XP_002343819 ANKRD17 0.027 ankyrin repeat domain protein 17 isoform a ANKRD17 0.027 ankyrin repeat domain protein 17 isoform b RNF38 0.024 ring finger protein 38 isoform 2 RNF38 0.024 ring finger protein 38 isoform 2 RNF38 0.024 ring finger protein 38 isoform 3 RNF38 0.024 ring finger protein 38 isoform 2 RNF38 0.024 ring finger protein 38 isoform 1 FLJ10404 0.024 hypothetical protein LOC54540 C17orf63 0.024 hypothetical protein LOC55731 C17orf63 0.024 hypothetical protein LOC55731 SPRY4 0.022 sprouty homolog 4 isoform 1 TANC2 0.022 tetratricopeptide repeat, ankyrin repeat and coiled... SHANK3 0.022 SH3 and multiple ankyrin repeat domains 3 NCOA6 0.022 nuclear receptor coactivator 6 TNRC6B 0.020 trinucleotide repeat containing 6B isoform 2 TNRC6B 0.020 trinucleotide repeat containing 6B isoform 3 TNRC6B 0.020 trinucleotide repeat containing 6B isoform 1 LOC100133981 0.020 PREDICTED: hypothetical protein LOC100133439 0.020 PREDICTED: hypothetical protein MED15 0.020 mediator complex subunit 15 isoform b LOC100133408 0.017 PREDICTED: similar to mucin ELK4 0.017 ELK4 protein isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.