Guide to the Human Genome
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Name: SLC38A5 Sequence: fasta or formatted (472aa) NCBI GI: 193788624
Description:

solute carrier family 38, member 5

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         39           1
 C cysteine            2.5         12           1
 D aspartate           1.7          8           1
 E glutamate           3.4         16           1
 F phenylalanine       6.6         31           2
 G glycine             8.1         38           1
 H histidine           1.9          9           1
 I isoleucine          7.2         34           3
 K lysine              3.0         14           2
 L leucine            14.0         66           3
 M methionine          4.7         22           1
 N asparagine          2.1         10           1
 P proline             5.5         26           1
 Q glutamine           3.2         15           2
 R arginine            3.2         15           2
 S serine              8.1         38           2
 T threonine           4.0         19           1
 V valine              8.5         40           3
 W tryptophan          0.8          4           1
 Y tyrosine            3.4         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 38, member 5 
SLC38A3               0.568   solute carrier family 38, member 3 
SLC38A4               0.439   solute carrier family 38, member 4 
SLC38A4               0.439   solute carrier family 38, member 4 
SLC38A2               0.437   solute carrier family 38, member 2 
SLC38A1               0.406   amino acid transporter system A1 
SLC38A1               0.406   amino acid transporter system A1 
SLC38A6               0.374   solute carrier family 38, member 6 
SLC38A8               0.089   solute carrier family 38, member 8 
SLC38A7               0.086   solute carrier family 38, member 7 
SLC38A11              0.085   solute carrier family 38, member 11 
SLC38A10              0.085   solute carrier family 38, member 10 isoform a 
SLC38A10              0.085   solute carrier family 38, member 10 isoform b 
SLC32A1               0.048   solute carrier family 32, member 1 
SLC36A4               0.039   solute carrier family 36 (proton/amino acid symporte...
SLC36A2               0.031   solute carrier family 36, member 2 
SLC36A3               0.030   solute carrier family 36, member 3 isoform 2 
SLC38A9               0.021   solute carrier family 38, member 9 
SLC36A3               0.019   solute carrier family 36, member 3 isoform 1 
SLC36A1               0.012   solute carrier family 36 member 1 
EPOR                  0.008   erythropoietin receptor precursor 
CHRNA1                0.007   nicotinic cholinergic receptor alpha 1 isoform b prec...
CHRNA1                0.007   nicotinic cholinergic receptor alpha 1 isoform a pre...
CATSPER3              0.006   cation channel, sperm associated 3 
AMAC1L1               0.006   PREDICTED: acyl-malonyl condensing enzyme 1-like 1 [...
AMAC1                 0.004   acyl-malonyl condensing enzyme 1 
KCNN4                 0.004   intermediate conductance calcium-activated potassium ...
AMAC1L1               0.004   PREDICTED: acyl-malonyl condensing enzyme 1-like 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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