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Search of human proteins with 18765702
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|18765702 engulfment and cell motility 1 isoform 2 [Homo
sapiens]
(247 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|86788140 engulfment and cell motility 1 isoform 2 [Homo sapiens] 503 e-143
gi|18765702 engulfment and cell motility 1 isoform 2 [Homo sapiens] 503 e-143
gi|18765700 engulfment and cell motility 1 isoform 1 [Homo sapiens] 503 e-143
gi|19718769 engulfment and cell motility 2 [Homo sapiens] 403 e-113
gi|33469947 engulfment and cell motility 2 [Homo sapiens] 403 e-113
gi|87298935 engulfment and cell motility 3 [Homo sapiens] 300 8e-82
gi|118918407 spectrin repeat containing, nuclear envelope 2 isof... 31 0.87
gi|118918403 spectrin repeat containing, nuclear envelope 2 isof... 31 0.87
gi|117320537 phospholipase C, gamma 2 [Homo sapiens] 31 1.1
gi|222537750 ankyrin repeat domain 30B [Homo sapiens] 30 1.5
gi|55770834 centromere protein F [Homo sapiens] 30 1.5
gi|29029601 DEAH (Asp-Glu-Ala-His) box polypeptide 37 [Homo sapi... 29 3.3
gi|187761324 shootin1 isoform a [Homo sapiens] 29 3.3
gi|50511340 shootin1 isoform b [Homo sapiens] 29 3.3
gi|65507253 hypothetical protein LOC55196 [Homo sapiens] 29 4.3
gi|50658069 phosphodiesterase 4D interacting protein isoform 2 [... 28 5.6
gi|157311604 phosphodiesterase 4D interacting protein isoform 1 ... 28 5.6
gi|112421122 DnaJ (Hsp40) homolog, subfamily C, member 13 [Homo ... 28 5.6
gi|190194355 p90 autoantigen [Homo sapiens] 28 7.4
gi|7657269 PDS5, regulator of cohesion maintenance, homolog B [H... 28 7.4
gi|16507200 ubiquitin specific protease 28 [Homo sapiens] 28 7.4
gi|115430231 REC8 homolog [Homo sapiens] 28 7.4
gi|115430229 REC8 homolog [Homo sapiens] 28 7.4
gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo s... 28 9.6
gi|239747898 PREDICTED: actin, beta-like 3 [Homo sapiens] 28 9.6
gi|239745259 PREDICTED: hypothetical protein isoform 2 [Homo sap... 28 9.6
gi|169208122 PREDICTED: hypothetical protein isoform 1 [Homo sap... 28 9.6
gi|239741786 PREDICTED: kappa-actin [Homo sapiens] 28 9.6
gi|88943074 PREDICTED: similar to Phosphodiesterase 4D interacti... 28 9.6
gi|16418467 leucine-rich alpha-2-glycoprotein 1 [Homo sapiens] 28 9.6
>gi|86788140 engulfment and cell motility 1 isoform 2 [Homo sapiens]
Length = 247
Score = 503 bits (1295), Expect = e-143
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MQVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQSRPILELKEKI 60
MQVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQSRPILELKEKI
Sbjct: 1 MQVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQSRPILELKEKI 60
Query: 61 QPEILELIKQQRLNRLVEGTCFRKLNARRRQDKFWYCRLSPNHKVLHYGDLEESPQGEVP 120
QPEILELIKQQRLNRLVEGTCFRKLNARRRQDKFWYCRLSPNHKVLHYGDLEESPQGEVP
Sbjct: 61 QPEILELIKQQRLNRLVEGTCFRKLNARRRQDKFWYCRLSPNHKVLHYGDLEESPQGEVP 120
Query: 121 HDSLQDKLPVADIKAVVTGKDCPHMKEKGALKQNKEVLELAFSILYDSNCQLNFIAPDKH 180
HDSLQDKLPVADIKAVVTGKDCPHMKEKGALKQNKEVLELAFSILYDSNCQLNFIAPDKH
Sbjct: 121 HDSLQDKLPVADIKAVVTGKDCPHMKEKGALKQNKEVLELAFSILYDSNCQLNFIAPDKH 180
Query: 181 EYCIWTDGLNALLGKDMMSDLTRNDLDTLLSMEIKLRLLDLENIQIPDAPPPIPKEPSNY 240
EYCIWTDGLNALLGKDMMSDLTRNDLDTLLSMEIKLRLLDLENIQIPDAPPPIPKEPSNY
Sbjct: 181 EYCIWTDGLNALLGKDMMSDLTRNDLDTLLSMEIKLRLLDLENIQIPDAPPPIPKEPSNY 240
Query: 241 DFVYDCN 247
DFVYDCN
Sbjct: 241 DFVYDCN 247
>gi|18765702 engulfment and cell motility 1 isoform 2 [Homo sapiens]
Length = 247
Score = 503 bits (1295), Expect = e-143
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MQVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQSRPILELKEKI 60
MQVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQSRPILELKEKI
Sbjct: 1 MQVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQSRPILELKEKI 60
Query: 61 QPEILELIKQQRLNRLVEGTCFRKLNARRRQDKFWYCRLSPNHKVLHYGDLEESPQGEVP 120
QPEILELIKQQRLNRLVEGTCFRKLNARRRQDKFWYCRLSPNHKVLHYGDLEESPQGEVP
Sbjct: 61 QPEILELIKQQRLNRLVEGTCFRKLNARRRQDKFWYCRLSPNHKVLHYGDLEESPQGEVP 120
Query: 121 HDSLQDKLPVADIKAVVTGKDCPHMKEKGALKQNKEVLELAFSILYDSNCQLNFIAPDKH 180
HDSLQDKLPVADIKAVVTGKDCPHMKEKGALKQNKEVLELAFSILYDSNCQLNFIAPDKH
Sbjct: 121 HDSLQDKLPVADIKAVVTGKDCPHMKEKGALKQNKEVLELAFSILYDSNCQLNFIAPDKH 180
Query: 181 EYCIWTDGLNALLGKDMMSDLTRNDLDTLLSMEIKLRLLDLENIQIPDAPPPIPKEPSNY 240
EYCIWTDGLNALLGKDMMSDLTRNDLDTLLSMEIKLRLLDLENIQIPDAPPPIPKEPSNY
Sbjct: 181 EYCIWTDGLNALLGKDMMSDLTRNDLDTLLSMEIKLRLLDLENIQIPDAPPPIPKEPSNY 240
Query: 241 DFVYDCN 247
DFVYDCN
Sbjct: 241 DFVYDCN 247
>gi|18765700 engulfment and cell motility 1 isoform 1 [Homo sapiens]
Length = 727
Score = 503 bits (1295), Expect = e-143
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MQVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQSRPILELKEKI 60
MQVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQSRPILELKEKI
Sbjct: 481 MQVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQSRPILELKEKI 540
Query: 61 QPEILELIKQQRLNRLVEGTCFRKLNARRRQDKFWYCRLSPNHKVLHYGDLEESPQGEVP 120
QPEILELIKQQRLNRLVEGTCFRKLNARRRQDKFWYCRLSPNHKVLHYGDLEESPQGEVP
Sbjct: 541 QPEILELIKQQRLNRLVEGTCFRKLNARRRQDKFWYCRLSPNHKVLHYGDLEESPQGEVP 600
Query: 121 HDSLQDKLPVADIKAVVTGKDCPHMKEKGALKQNKEVLELAFSILYDSNCQLNFIAPDKH 180
HDSLQDKLPVADIKAVVTGKDCPHMKEKGALKQNKEVLELAFSILYDSNCQLNFIAPDKH
Sbjct: 601 HDSLQDKLPVADIKAVVTGKDCPHMKEKGALKQNKEVLELAFSILYDSNCQLNFIAPDKH 660
Query: 181 EYCIWTDGLNALLGKDMMSDLTRNDLDTLLSMEIKLRLLDLENIQIPDAPPPIPKEPSNY 240
EYCIWTDGLNALLGKDMMSDLTRNDLDTLLSMEIKLRLLDLENIQIPDAPPPIPKEPSNY
Sbjct: 661 EYCIWTDGLNALLGKDMMSDLTRNDLDTLLSMEIKLRLLDLENIQIPDAPPPIPKEPSNY 720
Query: 241 DFVYDCN 247
DFVYDCN
Sbjct: 721 DFVYDCN 727
>gi|19718769 engulfment and cell motility 2 [Homo sapiens]
Length = 720
Score = 403 bits (1035), Expect = e-113
Identities = 193/244 (79%), Positives = 228/244 (93%)
Query: 1 MQVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQSRPILELKEKI 60
MQVV+EQ+ RAL +KP+SLDQFKSKL++LSY+EIL++RQSERM+Q+DFQS PI+EL+EKI
Sbjct: 474 MQVVREQITRALPSKPNSLDQFKSKLRSLSYSEILRLRQSERMSQDDFQSPPIVELREKI 533
Query: 61 QPEILELIKQQRLNRLVEGTCFRKLNARRRQDKFWYCRLSPNHKVLHYGDLEESPQGEVP 120
QPEILELIKQQRLNRL EG+ FRK+ RRRQ++FWYCRL+ NHKVLHYGDL+++PQGEV
Sbjct: 534 QPEILELIKQQRLNRLCEGSSFRKIGNRRRQERFWYCRLALNHKVLHYGDLDDNPQGEVT 593
Query: 121 HDSLQDKLPVADIKAVVTGKDCPHMKEKGALKQNKEVLELAFSILYDSNCQLNFIAPDKH 180
+SLQ+K+PVADIKA+VTGKDCPHMKEK ALKQNKEVLELAFSILYD + LNFIAP+K+
Sbjct: 594 FESLQEKIPVADIKAIVTGKDCPHMKEKSALKQNKEVLELAFSILYDPDETLNFIAPNKY 653
Query: 181 EYCIWTDGLNALLGKDMMSDLTRNDLDTLLSMEIKLRLLDLENIQIPDAPPPIPKEPSNY 240
EYCIW DGL+ALLGKDM S+LT++DLDTLLSME+KLRLLDLENIQIP+APPPIPKEPS+Y
Sbjct: 654 EYCIWIDGLSALLGKDMSSELTKSDLDTLLSMEMKLRLLDLENIQIPEAPPPIPKEPSSY 713
Query: 241 DFVY 244
DFVY
Sbjct: 714 DFVY 717
>gi|33469947 engulfment and cell motility 2 [Homo sapiens]
Length = 720
Score = 403 bits (1035), Expect = e-113
Identities = 193/244 (79%), Positives = 228/244 (93%)
Query: 1 MQVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQSRPILELKEKI 60
MQVV+EQ+ RAL +KP+SLDQFKSKL++LSY+EIL++RQSERM+Q+DFQS PI+EL+EKI
Sbjct: 474 MQVVREQITRALPSKPNSLDQFKSKLRSLSYSEILRLRQSERMSQDDFQSPPIVELREKI 533
Query: 61 QPEILELIKQQRLNRLVEGTCFRKLNARRRQDKFWYCRLSPNHKVLHYGDLEESPQGEVP 120
QPEILELIKQQRLNRL EG+ FRK+ RRRQ++FWYCRL+ NHKVLHYGDL+++PQGEV
Sbjct: 534 QPEILELIKQQRLNRLCEGSSFRKIGNRRRQERFWYCRLALNHKVLHYGDLDDNPQGEVT 593
Query: 121 HDSLQDKLPVADIKAVVTGKDCPHMKEKGALKQNKEVLELAFSILYDSNCQLNFIAPDKH 180
+SLQ+K+PVADIKA+VTGKDCPHMKEK ALKQNKEVLELAFSILYD + LNFIAP+K+
Sbjct: 594 FESLQEKIPVADIKAIVTGKDCPHMKEKSALKQNKEVLELAFSILYDPDETLNFIAPNKY 653
Query: 181 EYCIWTDGLNALLGKDMMSDLTRNDLDTLLSMEIKLRLLDLENIQIPDAPPPIPKEPSNY 240
EYCIW DGL+ALLGKDM S+LT++DLDTLLSME+KLRLLDLENIQIP+APPPIPKEPS+Y
Sbjct: 654 EYCIWIDGLSALLGKDMSSELTKSDLDTLLSMEMKLRLLDLENIQIPEAPPPIPKEPSSY 713
Query: 241 DFVY 244
DFVY
Sbjct: 714 DFVY 717
>gi|87298935 engulfment and cell motility 3 [Homo sapiens]
Length = 773
Score = 300 bits (768), Expect = 8e-82
Identities = 144/250 (57%), Positives = 197/250 (78%), Gaps = 4/250 (1%)
Query: 1 MQVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQSRPILELKEKI 60
MQVV+EQ+ R L KP+SL+ F++K+ L+Y E+L++RQ+ER++QE + PILEL+EK+
Sbjct: 521 MQVVREQLARTLALKPTSLELFRTKVNALTYGEVLRLRQTERLHQEGTLAPPILELREKL 580
Query: 61 QPEILELIKQQRLNRLVEGTCFRKLNARRRQDKFWYCRLSPNHKVLHYGDLEESPQGEVP 120
+PE++ LI+QQRL RL EGT FRK+++RRRQDK W+C LSPNHK+L YGD+EE
Sbjct: 581 KPELMGLIRQQRLLRLCEGTLFRKISSRRRQDKLWFCCLSPNHKLLQYGDMEEGASPPT- 639
Query: 121 HDSLQDKLPVADIKAVVTGKDCPHMKEKGALKQNKEVLELAFSILYD---SNCQLNFIAP 177
+SL ++LPVAD++A++TGKDCPH++EKG+ KQNK++ ELAFSI YD LNFIAP
Sbjct: 640 LESLPEQLPVADMRALLTGKDCPHVREKGSGKQNKDLYELAFSISYDRGEEEAYLNFIAP 699
Query: 178 DKHEYCIWTDGLNALLGKDMMSDLTRNDLDTLLSMEIKLRLLDLENIQIPDAPPPIPKEP 237
K E+ +WTDGL+ALLG M S+ TR DL+ LL+ME KLRLL+LEN+ IP+ PPP+P P
Sbjct: 700 SKREFYLWTDGLSALLGSPMGSEQTRLDLEQLLTMETKLRLLELENVPIPERPPPVPPPP 759
Query: 238 SNYDFVYDCN 247
+N++F YDC+
Sbjct: 760 TNFNFCYDCS 769
>gi|118918407 spectrin repeat containing, nuclear envelope 2 isoform 5
[Homo sapiens]
Length = 6907
Score = 31.2 bits (69), Expect = 0.87
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 15 KPSSLDQFKSKLQ--NLSYTEILKIRQSERMNQEDFQSRPILELKEKIQPEILELIK 69
K SS + + LQ NLS E + + + Q+DFQ + +LELK Q + ++ I+
Sbjct: 4347 KKSSEPEHQEALQPVNLSELESIVTERPQFSRQKDFQQQQVLELKPMEQKDFIKFIE 4403
>gi|118918403 spectrin repeat containing, nuclear envelope 2 isoform 1
[Homo sapiens]
Length = 6885
Score = 31.2 bits (69), Expect = 0.87
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 15 KPSSLDQFKSKLQ--NLSYTEILKIRQSERMNQEDFQSRPILELKEKIQPEILELIK 69
K SS + + LQ NLS E + + + Q+DFQ + +LELK Q + ++ I+
Sbjct: 4347 KKSSEPEHQEALQPVNLSELESIVTERPQFSRQKDFQQQQVLELKPMEQKDFIKFIE 4403
>gi|117320537 phospholipase C, gamma 2 [Homo sapiens]
Length = 1265
Score = 30.8 bits (68), Expect = 1.1
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 122 DSLQDKLPVADIKAVVTGKDCPHMKEKGALKQNKEVLELAFSILYDSN---CQLNFIAPD 178
D ++ L + +IK + GK+ + A++Q + + F+ILY + L+ A
Sbjct: 59 DKIEGFLDIMEIKEIRPGKNSKDFERAKAVRQKE---DCCFTILYGTQFVLSTLSLAADS 115
Query: 179 KHEYCIWTDGLNALLGKDMMSDLTRNDLDTLLSMEI 214
K + W GL +L ++ M+ T +++ L +I
Sbjct: 116 KEDAVNWLSGLK-ILHQEAMNASTPTIIESWLRKQI 150
>gi|222537750 ankyrin repeat domain 30B [Homo sapiens]
Length = 1392
Score = 30.4 bits (67), Expect = 1.5
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 24/159 (15%)
Query: 17 SSLDQFKSKLQNLSYT---EILKIRQSERMNQEDFQSRPILELKEKIQPEILELIKQQRL 73
S + KS+L+N E+ +R + +NQE+ + R + LKEKI+PE +L K+ +
Sbjct: 989 SEAKEIKSQLENQKAKWEQELCSVRLT--LNQEEEKRRNVDILKEKIRPE-EQLRKKLEV 1045
Query: 74 NRLVEGTCFRKLNARRRQDKFWYCRLSPNHKVLHYGDLEESPQGEVPHDSLQDKLPVADI 133
+ +E T R QD S ++V H + E ++ H++ K +A +
Sbjct: 1046 KQQLEQTL-------RIQDIELKSVTSNLNQVSHTHESE----NDLFHENCMLKKEIAML 1094
Query: 134 KAVVTGKDCPHMKEKGALKQNKEVLELAFSILYDSNCQL 172
K V +K + +K+NK ++ IL + N +L
Sbjct: 1095 KLEVA-----TLKHQHQVKENKYFEDI--KILQEKNAEL 1126
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 30.4 bits (67), Expect = 1.5
Identities = 33/158 (20%), Positives = 64/158 (40%), Gaps = 8/158 (5%)
Query: 2 QVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQSRPILE----LK 57
Q V + + AL K L K++ EI ++++S + ++ + +L L+
Sbjct: 896 QNVVAETLSALENKEKELQLLNDKVET-EQAEIQELKKSNHLLEDSLKELQLLSETLSLE 954
Query: 58 EKIQPEILELIKQQRLNRLVEGTCFRKLNARRRQDKFWYCRLSPNHKVLHYGDLEESPQG 117
+K I+ L K++ E +++NA Q+K + + +Y D E
Sbjct: 955 KKEMSSIISLNKREIEELTQENGTLKEINASLNQEKM--NLIQKSESFANYIDEREKSIS 1012
Query: 118 EVPHDSLQDKLPVADIKAVVTGKDCPHMKEKGALKQNK 155
E+ Q+KL + + TG + +K Q K
Sbjct: 1013 ELSDQYKQEKLILLQ-RCEETGNAYEDLSQKYKAAQEK 1049
>gi|29029601 DEAH (Asp-Glu-Ala-His) box polypeptide 37 [Homo
sapiens]
Length = 1157
Score = 29.3 bits (64), Expect = 3.3
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 175 IAPDKHEYCIWTDGLNALLGKDMMSDLTRNDLDTLLSMEIKLRLLDL-ENIQIPDAPPPI 233
I + HE ++TD L LL + + RN LL M LR+ D +N ++ PPP+
Sbjct: 370 IIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQNPRLFAKPPPV 429
Query: 234 PKEPS 238
K S
Sbjct: 430 IKVES 434
>gi|187761324 shootin1 isoform a [Homo sapiens]
Length = 631
Score = 29.3 bits (64), Expect = 3.3
Identities = 49/229 (21%), Positives = 90/229 (39%), Gaps = 39/229 (17%)
Query: 19 LDQFKSKLQNLSYTEILKIRQSER-MNQEDFQSRPILELKEKIQPEILELIKQQRLNRLV 77
L+ KSKL + E+ K++Q + +N E + R +LE ++ +E ++ ++N +
Sbjct: 165 LENLKSKLVEV-IEEVNKVKQEKTVLNSEVLEQRKVLEKCNRVSMLAVEEYEEMQVNLEL 223
Query: 78 EGTCFRKLNARRRQDKFWYCRLSPNHKVLHYGDLEESPQGEVPHDSLQDKLPVADI-KAV 136
E RK Q+ F +E++ H LQ +P + KA+
Sbjct: 224 EKD-LRKKAESFAQEMF----------------IEQNKLKRQSHLLLQSSIPDQQLLKAL 266
Query: 137 VTGKDCPHMKEKGALKQNKEVLELAFSI--------LYDSNCQLNFIAPDKHEYCIWTDG 188
E+ ++ ++V EL + +++ QL + DK E +
Sbjct: 267 DENAKLTQQLEEERIQHQQKVKELEEQLENETLHKEIHNLKQQLELLEEDKKELEL---- 322
Query: 189 LNALLGKDMMSDLTRNDLDTLLSMEIKLRLLDLENIQIPDAPPPIPKEP 237
K S+ +L + E++ R+ EN P PPP P P
Sbjct: 323 ------KYQNSEEKARNLKHSVD-ELQKRVNQSENSVPPPPPPPPPLPP 364
>gi|50511340 shootin1 isoform b [Homo sapiens]
Length = 456
Score = 29.3 bits (64), Expect = 3.3
Identities = 49/229 (21%), Positives = 90/229 (39%), Gaps = 39/229 (17%)
Query: 19 LDQFKSKLQNLSYTEILKIRQSER-MNQEDFQSRPILELKEKIQPEILELIKQQRLNRLV 77
L+ KSKL + E+ K++Q + +N E + R +LE ++ +E ++ ++N +
Sbjct: 165 LENLKSKLVEV-IEEVNKVKQEKTVLNSEVLEQRKVLEKCNRVSMLAVEEYEEMQVNLEL 223
Query: 78 EGTCFRKLNARRRQDKFWYCRLSPNHKVLHYGDLEESPQGEVPHDSLQDKLPVADI-KAV 136
E RK Q+ F +E++ H LQ +P + KA+
Sbjct: 224 EKD-LRKKAESFAQEMF----------------IEQNKLKRQSHLLLQSSIPDQQLLKAL 266
Query: 137 VTGKDCPHMKEKGALKQNKEVLELAFSI--------LYDSNCQLNFIAPDKHEYCIWTDG 188
E+ ++ ++V EL + +++ QL + DK E +
Sbjct: 267 DENAKLTQQLEEERIQHQQKVKELEEQLENETLHKEIHNLKQQLELLEEDKKELEL---- 322
Query: 189 LNALLGKDMMSDLTRNDLDTLLSMEIKLRLLDLENIQIPDAPPPIPKEP 237
K S+ +L + E++ R+ EN P PPP P P
Sbjct: 323 ------KYQNSEEKARNLKHSVD-ELQKRVNQSENSVPPPPPPPPPLPP 364
>gi|65507253 hypothetical protein LOC55196 [Homo sapiens]
Length = 1747
Score = 28.9 bits (63), Expect = 4.3
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 9 MRALTTKPSSLDQFKSKLQN-LSYTEILKIRQSERMNQEDF---QSRPILELKEKIQPEI 64
++ LT+K S+++ ++ L LS + K+ Q+ E +S E K KIQ E
Sbjct: 522 VKVLTSKTSAVEMTQAVLNTQLSSENVTKVEQNSPAVCETISVPKSMSTEEYKSKIQNEN 581
Query: 65 LELIKQQRLNRLVEGTCFRKLNARRRQDKFWYCRLSPN 102
+ L+ R + T + N + K C ++PN
Sbjct: 582 MLLLALLSQARKTQKTVLKDANQTIQDSKPDSCEMNPN 619
>gi|50658069 phosphodiesterase 4D interacting protein isoform 2
[Homo sapiens]
Length = 969
Score = 28.5 bits (62), Expect = 5.6
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 18 SLDQFKSKLQNLSYTEILKIRQSERMNQEDFQSRPILE--LKEKIQPEILELIKQQRLN 74
+L Q +++ L+ + + R E++++E Q +LE ++QP EL+KQQ+LN
Sbjct: 167 ALAQRDKRIEELNQSLAAQERLVEQLSREKQQLLHLLEEPTSMEVQPMTEELLKQQKLN 225
Score = 27.7 bits (60), Expect = 9.6
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 1 MQVVKEQVMRALTTKPSSLDQFKSKLQNL-SYTEILKIRQSERMNQEDFQSRPILELKEK 59
++V E + R L K LD+ + ++NL S E RQ E QE +LE K +
Sbjct: 51 LKVEVESLKRELQDKKQHLDKTWADVENLNSQNEAELRRQFEERQQETEHVYELLENKIQ 110
Query: 60 IQPEILELIKQQ--RLNRLVE 78
+ E L K + R+ LVE
Sbjct: 111 LLQEESRLAKNEAARMAALVE 131
>gi|157311604 phosphodiesterase 4D interacting protein isoform 1
[Homo sapiens]
Length = 2346
Score = 28.5 bits (62), Expect = 5.6
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 18 SLDQFKSKLQNLSYTEILKIRQSERMNQEDFQSRPILE--LKEKIQPEILELIKQQRLN 74
+L Q +++ L+ + + R E++++E Q +LE ++QP EL+KQQ+LN
Sbjct: 167 ALAQRDKRIEELNQSLAAQERLVEQLSREKQQLLHLLEEPTSMEVQPMTEELLKQQKLN 225
Score = 27.7 bits (60), Expect = 9.6
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 1 MQVVKEQVMRALTTKPSSLDQFKSKLQNL-SYTEILKIRQSERMNQEDFQSRPILELKEK 59
++V E + R L K LD+ + ++NL S E RQ E QE +LE K +
Sbjct: 51 LKVEVESLKRELQDKKQHLDKTWADVENLNSQNEAELRRQFEERQQETEHVYELLENKIQ 110
Query: 60 IQPEILELIKQQ--RLNRLVE 78
+ E L K + R+ LVE
Sbjct: 111 LLQEESRLAKNEAARMAALVE 131
>gi|112421122 DnaJ (Hsp40) homolog, subfamily C, member 13 [Homo
sapiens]
Length = 2243
Score = 28.5 bits (62), Expect = 5.6
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 15/101 (14%)
Query: 25 KLQNLSYTEILKIRQSERMNQEDFQSRPILELKEKIQPEILELIKQQRLNRLVEGTCFRK 84
KL S TEILK+ S N E P L + E+LE ++ Q+ N + +G C +
Sbjct: 1620 KLAVASVTEILKMLNS---NTES----PYLIWNNSTRAELLEFLESQQENMIKKGDCDKT 1672
Query: 85 LNARRRQDKFWYCRLSPNHKVLHYGDLEESPQGEVPHDSLQ 125
+ +F Y S + K L G++ EVP L+
Sbjct: 1673 YGS-----EFVY---SDHAKELIVGEIFVRVYNEVPTFQLE 1705
>gi|190194355 p90 autoantigen [Homo sapiens]
Length = 905
Score = 28.1 bits (61), Expect = 7.4
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 6 EQVMRALTTKPSSLDQFKSKLQ-NLSYTEILKIRQSERMNQEDFQSRPILELK-EKIQPE 63
EQ+ + L+ K SSL+ K++L+ L E L Q E +N+ I L KI PE
Sbjct: 840 EQIRKELSIKASSLEVQKAQLEGRLEEKESLVKLQQEELNKHSHMIAMIHSLSGGKINPE 899
Query: 64 ILEL 67
+ L
Sbjct: 900 TVNL 903
>gi|7657269 PDS5, regulator of cohesion maintenance, homolog B [Homo
sapiens]
Length = 1447
Score = 28.1 bits (61), Expect = 7.4
Identities = 19/86 (22%), Positives = 36/86 (41%)
Query: 85 LNARRRQDKFWYCRLSPNHKVLHYGDLEESPQGEVPHDSLQDKLPVADIKAVVTGKDCPH 144
LNA + ++ W C+ H+V DL + P+ + ++ K+ V GK
Sbjct: 486 LNAVKALNEMWKCQNLLRHQVKDLLDLIKQPKTDASVKAIFSKVMVITRNLPDPGKAQDF 545
Query: 145 MKEKGALKQNKEVLELAFSILYDSNC 170
MK+ + ++ E + +L C
Sbjct: 546 MKKFTQVLEDDEKIRKQLEVLVSPTC 571
>gi|16507200 ubiquitin specific protease 28 [Homo sapiens]
Length = 1077
Score = 28.1 bits (61), Expect = 7.4
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 4 VKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQSRPILELKE--KIQ 61
VKE + T+PS ++ + + L+ K+ N++D Q+ L L E KIQ
Sbjct: 63 VKEPSQDTVATEPSEVEGSAANKEVLA-----KVIDLTHDNKDDLQAAIALSLLESPKIQ 117
Query: 62 PEILELIKQQRLNRLVEGTCFRKLNARRRQDKFWYCRLSPN 102
+ + LNR+ E T ++R++ + W +PN
Sbjct: 118 AD------GRDLNRMHEATSAETKRSKRKRCEVWGENPNPN 152
>gi|115430231 REC8 homolog [Homo sapiens]
Length = 547
Score = 28.1 bits (61), Expect = 7.4
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Query: 194 GKDMMSDLTRNDLDTLLSMEIKLRLLDLENIQIPDAPPPIPKE 236
G+ + +++R +LD L++ E + LL+ IP PPP P E
Sbjct: 209 GERELPEVSRRELDLLIAEEEEAILLE-----IPRLPPPAPAE 246
>gi|115430229 REC8 homolog [Homo sapiens]
Length = 547
Score = 28.1 bits (61), Expect = 7.4
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Query: 194 GKDMMSDLTRNDLDTLLSMEIKLRLLDLENIQIPDAPPPIPKE 236
G+ + +++R +LD L++ E + LL+ IP PPP P E
Sbjct: 209 GERELPEVSRRELDLLIAEEEEAILLE-----IPRLPPPAPAE 246
>gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo
sapiens]
Length = 1935
Score = 27.7 bits (60), Expect = 9.6
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 6 EQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSER------MNQEDFQSRPILELKEK 59
E+ + A+ K SSL++ K +LQN ++ + +S Q +F + + E K+K
Sbjct: 1401 EEAVEAVNAKCSSLEKTKHRLQNEIEDLMVDVERSNAAAAALDKKQRNF-DKILAEWKQK 1459
Query: 60 IQPEILELIKQQRLNRLVEGTCFRKLNA 87
+ EL Q+ R + F+ NA
Sbjct: 1460 YEESQSELESSQKEARSLSTELFKLKNA 1487
>gi|239747898 PREDICTED: actin, beta-like 3 [Homo sapiens]
Length = 924
Score = 27.7 bits (60), Expect = 9.6
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Query: 150 ALKQNKEVLELAFSILYDSNCQLNFIAPDKHEYCIWTDG 188
A + KE+ LA SI+ ++ IAP K +Y +W G
Sbjct: 859 AHRMQKEITALAPSIM-----KIKIIAPPKRKYSVWVGG 892
>gi|239745259 PREDICTED: hypothetical protein isoform 2 [Homo
sapiens]
Length = 432
Score = 27.7 bits (60), Expect = 9.6
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 6 EQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQSRPILELKEKIQPEIL 65
EQ R + +Q K Q E+ K+ + ER +E Q R +LE +E++ E+
Sbjct: 224 EQEERLCEQEERLCEQEKLPGQERLLEEVEKLLEQERRQEE--QER-LLE-RERLLDEVE 279
Query: 66 ELIKQQRL----NRLVEGTCFRKLNARRRQDK 93
EL++Q+RL RL + R+L R ++
Sbjct: 280 ELLEQERLRQQDERLWQQETLRELERLRELER 311
>gi|169208122 PREDICTED: hypothetical protein isoform 1 [Homo
sapiens]
Length = 479
Score = 27.7 bits (60), Expect = 9.6
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 6 EQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQSRPILELKEKIQPEIL 65
EQ R + +Q K Q E+ K+ + ER +E Q R +LE +E++ E+
Sbjct: 259 EQEERLCEQEERLCEQEKLPGQERLLEEVEKLLEQERRQEE--QER-LLE-RERLLDEVE 314
Query: 66 ELIKQQRL----NRLVEGTCFRKLNARRRQDK 93
EL++Q+RL RL + R+L R ++
Sbjct: 315 ELLEQERLRQQDERLWQQETLRELERLRELER 346
>gi|239741786 PREDICTED: kappa-actin [Homo sapiens]
Length = 924
Score = 27.7 bits (60), Expect = 9.6
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Query: 150 ALKQNKEVLELAFSILYDSNCQLNFIAPDKHEYCIWTDG 188
A + KE+ LA SI+ ++ IAP K +Y +W G
Sbjct: 859 AHRMQKEITALAPSIM-----KIKIIAPPKRKYSVWVGG 892
>gi|88943074 PREDICTED: similar to Phosphodiesterase 4D
interacting protein [Homo sapiens]
Length = 134
Score = 27.7 bits (60), Expect = 9.6
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 1 MQVVKEQVMRALTTKPSSLDQFKSKLQNL-SYTEILKIRQSERMNQEDFQSRPILELKEK 59
++V E + R L K LD+ + ++NL S E RQ E QE +LE K +
Sbjct: 12 LKVEVESLKRELQDKKQHLDKTWADVENLNSQNEAELRRQFEERQQETEHVYELLENKIQ 71
Query: 60 IQPEILELIKQQ--RLNRLVE 78
+ E L K + R+ LVE
Sbjct: 72 LLQEESRLAKNEAARMAALVE 92
>gi|16418467 leucine-rich alpha-2-glycoprotein 1 [Homo sapiens]
Length = 347
Score = 27.7 bits (60), Expect = 9.6
Identities = 18/53 (33%), Positives = 24/53 (45%)
Query: 185 WTDGLNALLGKDMMSDLTRNDLDTLLSMEIKLRLLDLENIQIPDAPPPIPKEP 237
W GL AL D+ + R LL+ LR LDL Q+ PP + + P
Sbjct: 159 WLHGLKALGHLDLSGNRLRKLPPGLLANFTLLRTLDLGENQLETLPPDLLRGP 211
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,541,229
Number of Sequences: 37866
Number of extensions: 415084
Number of successful extensions: 1597
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 1576
Number of HSP's gapped (non-prelim): 50
length of query: 247
length of database: 18,247,518
effective HSP length: 100
effective length of query: 147
effective length of database: 14,460,918
effective search space: 2125754946
effective search space used: 2125754946
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.