Guide to the Human Genome
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Name: REC8 Sequence: fasta or formatted (547aa) NCBI GI: 115430229
Description:

REC8 homolog

Referenced in:

Spindle, M phase, and Meiosis

Other entries for this name:
alt mRNA [547aa] REC8 homolog
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         39           3
 C cysteine            1.1          6           1
 D aspartate           1.6          9           1
 E glutamate          14.3         78           4
 F phenylalanine       2.2         12           2
 G glycine             2.9         16           1
 H histidine           1.8         10           1
 I isoleucine          5.5         30           1
 K lysine              1.6          9           1
 L leucine            13.7         75           3
 M methionine          2.4         13           2
 N asparagine          0.9          5           1
 P proline            14.3         78           4
 Q glutamine           4.2         23           2
 R arginine            9.3         51           7
 S serine              4.2         23           2
 T threonine           3.1         17           1
 V valine              6.6         36           2
 W tryptophan          1.5          8           1
 Y tyrosine            1.6          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   REC8 homolog 
REC8                  1.000   REC8 homolog 
TTN                   0.045   titin isoform N2-A 
RAD21                 0.044   RAD21 homolog 
MLL2                  0.032   myeloid/lymphoid or mixed-lineage leukemia 2 
FSCB                  0.025   fibrous sheath CABYR binding protein 
PRAM1                 0.022   PML-RARA regulated adaptor molecule 1 
PRX                   0.022   periaxin isoform 2 
RAD21L1               0.022   RAD21-like 1 
MLL4                  0.019   myeloid/lymphoid or mixed-lineage leukemia 4 
WNK4                  0.018   WNK lysine deficient protein kinase 4 
RIN3                  0.017   Ras and Rab interactor 3 
FAM47C                0.017   hypothetical protein LOC442444 
LOC100132247          0.017   hypothetical protein LOC100132247 
ZAN                   0.017   zonadhesin isoform 3 
ZAN                   0.017   zonadhesin isoform 6 
BRD4                  0.016   bromodomain-containing protein 4 isoform long 
NPIPL3                0.016   nuclear pore complex interacting protein-like 3 [Ho...
VGF                   0.016   VGF nerve growth factor inducible precursor 
SRRM1                 0.016   serine/arginine repetitive matrix 1 
WASF1                 0.016   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.016   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.016   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.016   Wiskott-Aldrich syndrome protein family member 1 [Hom...
RAPH1                 0.016   Ras association and pleckstrin homology domains 1 is...
CHKA                  0.016   choline kinase alpha isoform b 
CHKA                  0.016   choline kinase alpha isoform a 
KIAA0754              0.015   hypothetical protein LOC643314 
NEFH                  0.015   neurofilament, heavy polypeptide 200kDa 
EFS                   0.015   embryonal Fyn-associated substrate isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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