Guide to the Human Genome
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Name: ELMO1 Sequence: fasta or formatted (247aa) NCBI GI: 86788140
Description:

engulfment and cell motility 1 isoform 2

Referenced in:

Rho and Rac

Other entries for this name:
alt prot [727aa] engulfment and cell motility 1 isoform 1
alt mRNA [247aa] engulfment and cell motility 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6          9           1
 C cysteine            2.4          6           1
 D aspartate           7.7         19           1
 E glutamate           7.7         19           2
 F phenylalanine       2.8          7           1
 G glycine             2.8          7           1
 H histidine           2.0          5           1
 I isoleucine          5.7         14           1
 K lysine              8.9         22           1
 L leucine            13.4         33           2
 M methionine          2.8          7           2
 N asparagine          5.3         13           1
 P proline             6.1         15           3
 Q glutamine           6.5         16           2
 R arginine            5.3         13           3
 S serine              5.7         14           2
 T threonine           3.2          8           2
 V valine              4.5         11           2
 W tryptophan          0.8          2           1
 Y tyrosine            2.8          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   engulfment and cell motility 1 isoform 2 
ELMO1                 1.000   engulfment and cell motility 1 isoform 2 
ELMO1                 1.000   engulfment and cell motility 1 isoform 1 
ELMO2                 0.791   engulfment and cell motility 2 
ELMO2                 0.791   engulfment and cell motility 2 
ELMO3                 0.575   engulfment and cell motility 3 
SYNE2                 0.013   spectrin repeat containing, nuclear envelope 2 isof...
SYNE2                 0.013   spectrin repeat containing, nuclear envelope 2 isof...
PLCG2                 0.013   phospholipase C, gamma 2 
ANKRD30B              0.010   ankyrin repeat domain 30B 
CENPF                 0.010   centromere protein F 
DHX37                 0.008   DEAH (Asp-Glu-Ala-His) box polypeptide 37 
KIAA1598              0.008   shootin1 isoform a 
KIAA1598              0.008   shootin1 isoform b 
C12orf35              0.008   hypothetical protein LOC55196 
PDE4DIP               0.006   phosphodiesterase 4D interacting protein isoform 2 [...
PDE4DIP               0.006   phosphodiesterase 4D interacting protein isoform 1 ...
DNAJC13               0.006   DnaJ (Hsp40) homolog, subfamily C, member 13 
KIAA1524              0.006   p90 autoantigen 
PDS5B                 0.006   PDS5, regulator of cohesion maintenance, homolog B [H...
USP28                 0.006   ubiquitin specific protease 28 
REC8                  0.006   REC8 homolog 
REC8                  0.006   REC8 homolog 
MYH7                  0.006   myosin, heavy chain 7, cardiac muscle, beta 
ACTBL3                0.006   PREDICTED: actin, beta-like 3 
LOC647042             0.006   PREDICTED: hypothetical protein isoform 2 
LOC647042             0.006   PREDICTED: hypothetical protein isoform 1 
ACTBL3                0.006   PREDICTED: kappa-actin 
LOC653513             0.006   PREDICTED: similar to Phosphodiesterase 4D interacti...
LRG1                  0.006   leucine-rich alpha-2-glycoprotein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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