Search of human proteins with 10440560

Search of human proteins with 10440560

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|10440560 histone cluster 1, H3f [Homo sapiens]
         (136 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4504287 histone cluster 1, H3e [Homo sapiens]                      266   4e-72
gi|4504295 histone cluster 1, H3h [Homo sapiens]                      266   4e-72
gi|4504289 histone cluster 1, H3i [Homo sapiens]                      266   4e-72
gi|4504281 histone cluster 1, H3a [Homo sapiens]                      266   4e-72
gi|10440560 histone cluster 1, H3f [Homo sapiens]                     266   4e-72
gi|21071021 histone cluster 1, H3d [Homo sapiens]                     266   4e-72
gi|4504297 histone cluster 1, H3b [Homo sapiens]                      266   4e-72
gi|4504293 histone cluster 1, H3j [Homo sapiens]                      266   4e-72
gi|4504285 histone cluster 1, H3c [Homo sapiens]                      266   4e-72
gi|4504291 H3 histone family, member H [Homo sapiens]                 266   4e-72
gi|53793688 histone cluster 2, H3a [Homo sapiens]                     262   6e-71
gi|31742503 histone cluster 2, H3c [Homo sapiens]                     262   6e-71
gi|183076548 histone cluster 2, H3d [Homo sapiens]                    262   6e-71
gi|4504299 histone cluster 3, H3 [Homo sapiens]                       261   2e-70
gi|4885385 H3 histone, family 3B [Homo sapiens]                       256   3e-69
gi|4504279 H3 histone, family 3A [Homo sapiens]                       256   3e-69
gi|188528667 histone H3-like [Homo sapiens]                           241   1e-64
gi|239742494 PREDICTED: similar to hCG1642908 [Homo sapiens]          215   1e-56
gi|169167761 PREDICTED: similar to HIStone family member (his-72...   211   1e-55
gi|88987392 PREDICTED: similar to HIStone family member (his-72)...   211   1e-55
gi|41147170 PREDICTED: similar to HIStone family member (his-72)...   211   1e-55
gi|239742093 PREDICTED: similar to histone H3.3B [Homo sapiens]       206   6e-54
gi|169167750 PREDICTED: similar to hCG1642908 [Homo sapiens]          157   3e-39
gi|169168508 PREDICTED: similar to hCG1642908 [Homo sapiens]          157   3e-39
gi|4502775 centromere protein A isoform a [Homo sapiens]              110   4e-25
gi|109637779 centromere protein A isoform b [Homo sapiens]             81   2e-16
gi|169216381 PREDICTED: H2B histone family, member M [Homo sapiens]    33   0.072
gi|169216635 PREDICTED: H2B histone family, member M [Homo sapiens]    33   0.072
gi|126722969 centromere protein T [Homo sapiens]                       33   0.094
gi|169217174 PREDICTED: H2B histone family, member M [Homo sapiens]    31   0.27 

>gi|4504287 histone cluster 1, H3e [Homo sapiens]
          Length = 136

 Score =  266 bits (680), Expect = 4e-72
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4504295 histone cluster 1, H3h [Homo sapiens]
          Length = 136

 Score =  266 bits (680), Expect = 4e-72
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4504289 histone cluster 1, H3i [Homo sapiens]
          Length = 136

 Score =  266 bits (680), Expect = 4e-72
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4504281 histone cluster 1, H3a [Homo sapiens]
          Length = 136

 Score =  266 bits (680), Expect = 4e-72
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|10440560 histone cluster 1, H3f [Homo sapiens]
          Length = 136

 Score =  266 bits (680), Expect = 4e-72
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|21071021 histone cluster 1, H3d [Homo sapiens]
          Length = 136

 Score =  266 bits (680), Expect = 4e-72
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4504297 histone cluster 1, H3b [Homo sapiens]
          Length = 136

 Score =  266 bits (680), Expect = 4e-72
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4504293 histone cluster 1, H3j [Homo sapiens]
          Length = 136

 Score =  266 bits (680), Expect = 4e-72
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4504285 histone cluster 1, H3c [Homo sapiens]
          Length = 136

 Score =  266 bits (680), Expect = 4e-72
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4504291 H3 histone family, member H [Homo sapiens]
          Length = 136

 Score =  266 bits (680), Expect = 4e-72
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|53793688 histone cluster 2, H3a [Homo sapiens]
          Length = 136

 Score =  262 bits (670), Expect = 6e-71
 Identities = 135/136 (99%), Positives = 135/136 (99%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEA EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|31742503 histone cluster 2, H3c [Homo sapiens]
          Length = 136

 Score =  262 bits (670), Expect = 6e-71
 Identities = 135/136 (99%), Positives = 135/136 (99%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEA EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|183076548 histone cluster 2, H3d [Homo sapiens]
          Length = 136

 Score =  262 bits (670), Expect = 6e-71
 Identities = 135/136 (99%), Positives = 135/136 (99%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEA EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4504299 histone cluster 3, H3 [Homo sapiens]
          Length = 136

 Score =  261 bits (666), Expect = 2e-70
 Identities = 132/136 (97%), Positives = 134/136 (98%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATK ARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRL+REIAQDFKTDLRFQSSAVMALQEACE+YLVGLFEDTNLC IHAKRVTI
Sbjct: 61  LLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4885385 H3 histone, family 3B [Homo sapiens]
          Length = 136

 Score =  256 bits (655), Expect = 3e-69
 Identities = 131/136 (96%), Positives = 134/136 (98%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|4504279 H3 histone, family 3A [Homo sapiens]
          Length = 136

 Score =  256 bits (655), Expect = 3e-69
 Identities = 131/136 (96%), Positives = 134/136 (98%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gi|188528667 histone H3-like [Homo sapiens]
          Length = 135

 Score =  241 bits (615), Expect = 1e-64
 Identities = 127/136 (93%), Positives = 129/136 (94%), Gaps = 1/136 (0%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKS P+T GVK PHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSTPSTCGVK-PHRYRPGTVALREIRRYQKSTE 59

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDF TDLRFQS+AV ALQEA EAYLVGL EDTNLCAIHAKRVTI
Sbjct: 60  LLIRKLPFQRLVREIAQDFNTDLRFQSAAVGALQEASEAYLVGLLEDTNLCAIHAKRVTI 119

Query: 121 MPKDIQLARRIRGERA 136
           MPKDIQLARRIRGERA
Sbjct: 120 MPKDIQLARRIRGERA 135


>gi|239742494 PREDICTED: similar to hCG1642908 [Homo sapiens]
          Length = 147

 Score =  215 bits (547), Expect = 1e-56
 Identities = 108/136 (79%), Positives = 122/136 (89%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARK+T  +APRK LATKAARK A  TGG+KKPHRY+PGT+ALREIR+YQKST+
Sbjct: 1   MARTKQTARKATAWQAPRKPLATKAARKRASPTGGIKKPHRYKPGTLALREIRKYQKSTQ 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120
           LL+RKLPFQRLVREIAQ    DLRFQS+A+ ALQEA EAYLV LFEDTNLCAIHA+RVTI
Sbjct: 61  LLLRKLPFQRLVREIAQAISPDLRFQSAAIGALQEASEAYLVQLFEDTNLCAIHARRVTI 120

Query: 121 MPKDIQLARRIRGERA 136
           MP+D+QLARR+RGE A
Sbjct: 121 MPRDMQLARRLRGEGA 136


>gi|169167761 PREDICTED: similar to HIStone family member (his-72)
           [Homo sapiens]
          Length = 136

 Score =  211 bits (538), Expect = 1e-55
 Identities = 106/134 (79%), Positives = 120/134 (89%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARK+T  +APRK LATKAA K AP TGG+KKPHRY+PGT+ALREIR+YQKST+
Sbjct: 1   MARTKQTARKATAWQAPRKPLATKAAGKRAPPTGGIKKPHRYKPGTLALREIRKYQKSTQ 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120
           LL+RKLPFQRLVREIAQ    DLRFQS+A+ ALQEA EAYLV LFEDTNLCAIHA+RVTI
Sbjct: 61  LLLRKLPFQRLVREIAQAISPDLRFQSAAIGALQEASEAYLVQLFEDTNLCAIHARRVTI 120

Query: 121 MPKDIQLARRIRGE 134
           MP+D+QLARR+R E
Sbjct: 121 MPRDMQLARRLRRE 134


>gi|88987392 PREDICTED: similar to HIStone family member (his-72)
           [Homo sapiens]
          Length = 136

 Score =  211 bits (538), Expect = 1e-55
 Identities = 106/134 (79%), Positives = 120/134 (89%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARK+T  +APRK LATKAA K AP TGG+KKPHRY+PGT+ALREIR+YQKST+
Sbjct: 1   MARTKQTARKATAWQAPRKPLATKAAGKRAPPTGGIKKPHRYKPGTLALREIRKYQKSTQ 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120
           LL+RKLPFQRLVREIAQ    DLRFQS+A+ ALQEA EAYLV LFEDTNLCAIHA+RVTI
Sbjct: 61  LLLRKLPFQRLVREIAQAISPDLRFQSAAIGALQEASEAYLVQLFEDTNLCAIHARRVTI 120

Query: 121 MPKDIQLARRIRGE 134
           MP+D+QLARR+R E
Sbjct: 121 MPRDMQLARRLRRE 134


>gi|41147170 PREDICTED: similar to HIStone family member (his-72)
           [Homo sapiens]
          Length = 136

 Score =  211 bits (538), Expect = 1e-55
 Identities = 106/134 (79%), Positives = 120/134 (89%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARK+T  +APRK LATKAA K AP TGG+KKPHRY+PGT+ALREIR+YQKST+
Sbjct: 1   MARTKQTARKATAWQAPRKPLATKAAGKRAPPTGGIKKPHRYKPGTLALREIRKYQKSTQ 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120
           LL+RKLPFQRLVREIAQ    DLRFQS+A+ ALQEA EAYLV LFEDTNLCAIHA+RVTI
Sbjct: 61  LLLRKLPFQRLVREIAQAISPDLRFQSAAIGALQEASEAYLVQLFEDTNLCAIHARRVTI 120

Query: 121 MPKDIQLARRIRGE 134
           MP+D+QLARR+R E
Sbjct: 121 MPRDMQLARRLRRE 134


>gi|239742093 PREDICTED: similar to histone H3.3B [Homo sapiens]
          Length = 141

 Score =  206 bits (523), Expect = 6e-54
 Identities = 104/122 (85%), Positives = 114/122 (93%)

Query: 15  KAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVRE 74
           KA RKQL TKAA KSAP+TGGVKKPH YRPGTVALREIRRYQK+TELLIRKL FQRLV+E
Sbjct: 20  KAARKQLGTKAAHKSAPSTGGVKKPHHYRPGTVALREIRRYQKATELLIRKLRFQRLVQE 79

Query: 75  IAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134
           IAQD KTDLRFQS+A+ ALQEA EAYLVGLFED+NLCAIHAKR+TIMPK+IQLARRI+G+
Sbjct: 80  IAQDLKTDLRFQSAAIGALQEASEAYLVGLFEDSNLCAIHAKRLTIMPKEIQLARRIQGK 139

Query: 135 RA 136
           RA
Sbjct: 140 RA 141


>gi|169167750 PREDICTED: similar to hCG1642908 [Homo sapiens]
          Length = 193

 Score =  157 bits (396), Expect = 3e-39
 Identities = 79/101 (78%), Positives = 89/101 (88%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARK+T  +APRK LATKAARK A  TGG+KKPHRY+PGT+ALREIR+YQKST+
Sbjct: 46  MARTKQTARKATAWQAPRKPLATKAARKRASPTGGIKKPHRYKPGTLALREIRKYQKSTQ 105

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYL 101
           LL+RKLPFQRLVREIAQ    DLRFQS+A+ ALQEA EAYL
Sbjct: 106 LLLRKLPFQRLVREIAQAISPDLRFQSAAIGALQEASEAYL 146


>gi|169168508 PREDICTED: similar to hCG1642908 [Homo sapiens]
          Length = 193

 Score =  157 bits (396), Expect = 3e-39
 Identities = 79/101 (78%), Positives = 89/101 (88%)

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60
           MARTKQTARK+T  +APRK LATKAARK A  TGG+KKPHRY+PGT+ALREIR+YQKST+
Sbjct: 46  MARTKQTARKATAWQAPRKPLATKAARKRASPTGGIKKPHRYKPGTLALREIRKYQKSTQ 105

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYL 101
           LL+RKLPFQRLVREIAQ    DLRFQS+A+ ALQEA EAYL
Sbjct: 106 LLLRKLPFQRLVREIAQAISPDLRFQSAAIGALQEASEAYL 146


>gi|4502775 centromere protein A isoform a [Homo sapiens]
          Length = 140

 Score =  110 bits (275), Expect = 4e-25
 Identities = 67/132 (50%), Positives = 83/132 (62%), Gaps = 9/132 (6%)

Query: 9   RKSTGGKAPRKQ----LATKAARKSAPATGGVKKPH-RYRPGTVALREIRRYQKSTELLI 63
           R+S   +APR++      T    +  P+ G     H R R G   L+EIR+ QKST LLI
Sbjct: 5   RRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGW--LKEIRKLQKSTHLLI 62

Query: 64  RKLPFQRLVREIAQDFK--TDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIM 121
           RKLPF RL REI   F    D  +Q+ A++ALQEA EA+LV LFED  L  +HA RVT+ 
Sbjct: 63  RKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLF 122

Query: 122 PKDIQLARRIRG 133
           PKD+QLARRIRG
Sbjct: 123 PKDVQLARRIRG 134


>gi|109637779 centromere protein A isoform b [Homo sapiens]
          Length = 114

 Score = 81.3 bits (199), Expect = 2e-16
 Identities = 56/130 (43%), Positives = 68/130 (52%), Gaps = 31/130 (23%)

Query: 9   RKSTGGKAPRKQ----LATKAARKSAPATGGVKKPH-RYRPGTVALREIRRYQKSTELLI 63
           R+S   +APR++      T    +  P+ G     H R R G   L+EIR+ QKST LLI
Sbjct: 5   RRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGW--LKEIRKLQKSTHLLI 62

Query: 64  RKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPK 123
           RKLPF RL                        A EA+LV LFED  L  +HA RVT+ PK
Sbjct: 63  RKLPFSRL------------------------AAEAFLVHLFEDAYLLTLHAGRVTLFPK 98

Query: 124 DIQLARRIRG 133
           D+QLARRIRG
Sbjct: 99  DVQLARRIRG 108


>gi|169216381 PREDICTED: H2B histone family, member M [Homo sapiens]
          Length = 257

 Score = 33.1 bits (74), Expect = 0.072
 Identities = 29/130 (22%), Positives = 53/130 (40%), Gaps = 16/130 (12%)

Query: 2   ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 61
           A ++ T+ +    + P++  +TKA ++      G ++ H  R G         Y      
Sbjct: 113 ASSETTSEEGQSIQEPKEANSTKAQKQKRRGCRGSRRRHANRRGDSFGDSFTPY------ 166

Query: 62  LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIM 121
                 F R+++++ Q     L     AV  +       L  +  +    A + KRVTI 
Sbjct: 167 ------FPRVLKQVHQG----LSLSQEAVSVMDSMIHDILDRIATEAGQLAHYTKRVTIT 216

Query: 122 PKDIQLARRI 131
            +DIQ+A R+
Sbjct: 217 SRDIQMAVRL 226


>gi|169216635 PREDICTED: H2B histone family, member M [Homo sapiens]
          Length = 257

 Score = 33.1 bits (74), Expect = 0.072
 Identities = 29/130 (22%), Positives = 53/130 (40%), Gaps = 16/130 (12%)

Query: 2   ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 61
           A ++ T+ +    + P++  +TKA ++      G ++ H  R G         Y      
Sbjct: 113 ASSETTSEEGQSIQEPKEANSTKAQKQKRRGCRGSRRRHANRRGDSFGDSFTPY------ 166

Query: 62  LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIM 121
                 F R+++++ Q     L     AV  +       L  +  +    A + KRVTI 
Sbjct: 167 ------FPRVLKQVHQG----LSLSQEAVSVMDSMIHDILDRIATEAGQLAHYTKRVTIT 216

Query: 122 PKDIQLARRI 131
            +DIQ+A R+
Sbjct: 217 SRDIQMAVRL 226


>gi|126722969 centromere protein T [Homo sapiens]
          Length = 561

 Score = 32.7 bits (73), Expect = 0.094
 Identities = 15/55 (27%), Positives = 29/55 (52%)

Query: 79  FKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133
           F   +  +  A+  +++  + Y   L +D  + A HA R T+ P+D++L  R +G
Sbjct: 469 FYAKMPMERKALEMVEKCLDKYFQHLCDDLEVFAAHAGRKTVKPEDLELLMRRQG 523


>gi|169217174 PREDICTED: H2B histone family, member M [Homo sapiens]
          Length = 248

 Score = 31.2 bits (69), Expect = 0.27
 Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 16/130 (12%)

Query: 2   ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 61
           A ++ T+ +    + P++  +TKA ++      G ++ H  R G         Y      
Sbjct: 104 ASSETTSEEGQSIQEPKEANSTKAQKQKRRGCRGSRRRHANRRGDSFGDSFTPY------ 157

Query: 62  LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIM 121
                 F R+++++       L     AV  +       L  +  +    A + KRVTI 
Sbjct: 158 ------FPRVLKQV----HXGLSLSQEAVSVMDSMIHDILDRIATEAGQLAHYTKRVTIT 207

Query: 122 PKDIQLARRI 131
            +DIQ+A R+
Sbjct: 208 SRDIQMAVRL 217


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.132    0.369 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,555,140
Number of Sequences: 37866
Number of extensions: 170390
Number of successful extensions: 619
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 574
Number of HSP's gapped (non-prelim): 61
length of query: 136
length of database: 18,247,518
effective HSP length: 91
effective length of query: 45
effective length of database: 14,801,712
effective search space: 666077040
effective search space used: 666077040
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.