HIST1H3D 12631

Name: HIST1H3D	Sequence: fasta or formatted (136aa)		NCBI GI: 21071021
Description: histone cluster 1, H3d		Referenced in: Histones, Related Proteins, and Modifying Enzymes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.2 18 2 C cysteine 1.5 2 1 D aspartate 2.9 4 1 E glutamate 5.1 7 1 F phenylalanine 2.9 4 1 G glycine 5.1 7 2 H histidine 1.5 2 1 I isoleucine 5.1 7 1 K lysine 9.6 13 2 L leucine 8.8 12 2 M methionine 2.2 3 1 N asparagine 0.7 1 1 P proline 4.4 6 1 Q glutamine 5.9 8 1 R arginine 13.2 18 2 S serine 3.7 5 2 T threonine 7.4 10 1 V valine 4.4 6 1 W tryptophan 0.0 0 0 Y tyrosine 2.2 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 histone cluster 1, H3d HIST1H3E 1.000 histone cluster 1, H3e HIST1H3H 1.000 histone cluster 1, H3h HIST1H3I 1.000 histone cluster 1, H3i HIST1H3A 1.000 histone cluster 1, H3a HIST1H3F 1.000 histone cluster 1, H3f HIST1H3B 1.000 histone cluster 1, H3b HIST1H3J 1.000 histone cluster 1, H3j HIST1H3C 1.000 histone cluster 1, H3c HIST1H3G 1.000 H3 histone family, member H HIST2H3A 0.983 histone cluster 2, H3a HIST2H3C 0.983 histone cluster 2, H3c HIST2H3D 0.983 histone cluster 2, H3d HIST3H3 0.979 histone cluster 3, H3 H3F3B 0.959 H3 histone, family 3B H3F3A 0.959 H3 histone, family 3A LOC440093 0.896 histone H3-like LOC340096 0.788 PREDICTED: similar to hCG1642908 LOC391769 0.772 PREDICTED: similar to HIStone family member (his-72... LOC391769 0.772 PREDICTED: similar to HIStone family member (his-72)... LOC391769 0.772 PREDICTED: similar to HIStone family member (his-72)... LOC644950 0.751 PREDICTED: similar to histone H3.3B LOC340096 0.548 PREDICTED: similar to hCG1642908 LOC340096 0.548 PREDICTED: similar to hCG1642908 CENPA 0.353 centromere protein A isoform a CENPA 0.232 centromere protein A isoform b H2BFM 0.033 PREDICTED: H2B histone family, member M H2BFM 0.033 PREDICTED: H2B histone family, member M CENPT 0.033 centromere protein T H2BFM 0.025 PREDICTED: H2B histone family, member M Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.