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Search of human proteins with 10092643
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|10092643 Yip1 domain family, member 1 [Homo sapiens]
(306 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|10092643 Yip1 domain family, member 1 [Homo sapiens] 624 e-179
gi|13128976 Yip1 domain family, member 2 [Homo sapiens] 294 6e-80
gi|31542713 MOCO sulphurase C-terminal domain containing 2 [Homo... 41 0.002
gi|24497490 solute carrier family 22 member 4 [Homo sapiens] 40 0.002
gi|49472828 natural killer cell-specific antigen KLIP1 [Homo sap... 39 0.006
gi|14150076 Yip1 domain family, member 4 [Homo sapiens] 39 0.008
gi|50897270 olfactory receptor, family 8, subfamily K, member 1 ... 36 0.037
gi|53933201 olfactory receptor, family 5, subfamily B, member 2 ... 36 0.037
gi|53933282 olfactory receptor, family 6, subfamily C, member 65... 35 0.064
gi|53828696 olfactory receptor, family 5, subfamily B, member 17... 33 0.41
gi|196123588 NADH dehydrogenase subunit 4 [Homo sapiens neandert... 32 0.70
gi|251831116 NADH dehydrogenase subunit 4 [Homo sapiens] 32 0.70
gi|53933268 olfactory receptor, family 6, subfamily C, member 74... 32 0.70
gi|51173717 actin-binding LIM protein 1 isoform s [Homo sapiens] 32 0.70
gi|51173715 actin-binding LIM protein 1 isoform c [Homo sapiens] 32 0.70
gi|51173713 actin-binding LIM protein 1 isoform b [Homo sapiens] 32 0.70
gi|51173711 actin-binding LIM protein 1 isoform a [Homo sapiens] 32 0.70
gi|51230656 olfactory receptor, family 8, subfamily I, member 2 ... 32 0.92
gi|23592222 olfactory receptor, family 5, subfamily P, member 2 ... 32 0.92
gi|91206450 ankyrin and armadillo repeat containing [Homo sapiens] 31 1.2
gi|50052934 olfactory receptor, family 1, subfamily Q, member 1 ... 31 1.6
gi|222080095 orexin receptor 1 [Homo sapiens] 30 2.0
gi|4505245 mannose receptor C type 1 precursor [Homo sapiens] 30 2.0
gi|57546917 mannose receptor, C type 1-like 1 [Homo sapiens] 30 2.0
gi|40807489 egf-like module containing, mucin-like, hormone rece... 30 2.7
gi|14211873 emopamil binding related protein, delta8-delta7 ster... 30 3.5
gi|154240686 FYVE, RhoGEF and PH domain containing 6 [Homo sapiens] 30 3.5
gi|4505445 neuropeptide Y receptor Y1 [Homo sapiens] 29 4.6
gi|9961252 ATP-binding cassette, subfamily B, member 4 isoform C... 29 6.0
gi|153945755 zinc finger protein 608 [Homo sapiens] 29 6.0
>gi|10092643 Yip1 domain family, member 1 [Homo sapiens]
Length = 306
Score = 624 bits (1608), Expect = e-179
Identities = 306/306 (100%), Positives = 306/306 (100%)
Query: 1 MAAVDDLQFEEFGNAATSLTANPDATTVNIEDPGETPKHQPGSPRGSGREEDDELLGNDD 60
MAAVDDLQFEEFGNAATSLTANPDATTVNIEDPGETPKHQPGSPRGSGREEDDELLGNDD
Sbjct: 1 MAAVDDLQFEEFGNAATSLTANPDATTVNIEDPGETPKHQPGSPRGSGREEDDELLGNDD 60
Query: 61 SDKTELLAGQKKSSPFWTFEYYQTFFDVDTYQVFDRIKGSLLPIPGKNFVRLYIRSNPDL 120
SDKTELLAGQKKSSPFWTFEYYQTFFDVDTYQVFDRIKGSLLPIPGKNFVRLYIRSNPDL
Sbjct: 61 SDKTELLAGQKKSSPFWTFEYYQTFFDVDTYQVFDRIKGSLLPIPGKNFVRLYIRSNPDL 120
Query: 121 YGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEFRKVSIAATIIYAYAWLVPLALW 180
YGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEFRKVSIAATIIYAYAWLVPLALW
Sbjct: 121 YGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEFRKVSIAATIIYAYAWLVPLALW 180
Query: 181 GFLMWRNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWILVMIALGISGS 240
GFLMWRNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWILVMIALGISGS
Sbjct: 181 GFLMWRNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWILVMIALGISGS 240
Query: 241 LLAMTFWPAVREDNRRVALATIVTIVLLHMLLSVGCLAYFFDAPEMDHLPTTTATPNQTV 300
LLAMTFWPAVREDNRRVALATIVTIVLLHMLLSVGCLAYFFDAPEMDHLPTTTATPNQTV
Sbjct: 241 LLAMTFWPAVREDNRRVALATIVTIVLLHMLLSVGCLAYFFDAPEMDHLPTTTATPNQTV 300
Query: 301 AAAKSS 306
AAAKSS
Sbjct: 301 AAAKSS 306
>gi|13128976 Yip1 domain family, member 2 [Homo sapiens]
Length = 316
Score = 294 bits (753), Expect = 6e-80
Identities = 149/305 (48%), Positives = 191/305 (62%), Gaps = 12/305 (3%)
Query: 1 MAAVDDLQFEEFGNAATSLTANPDATTVNIEDPGETPKHQPGSPRGSGREEDDELLGNDD 60
MA+ D+L F EF A L PDA T + D TP+ GSG E ++
Sbjct: 1 MASADELTFHEFEEATNLLADTPDAATTSRSDQ-LTPQGHVAVAVGSGGSYGAEDEVEEE 59
Query: 61 SDKTELLAGQKKSSP--FWTFEYYQTFFDVDTYQVFDRIKGSLLPIPGKNFVRLYIRSNP 118
SDK LL Q++ FWTF YYQ+FFDVDT QV DRIKGSLLP PG NFVR ++R+ P
Sbjct: 60 SDKAALLQEQQQQQQPGFWTFSYYQSFFDVDTSQVLDRIKGSLLPRPGHNFVRHHLRNRP 119
Query: 119 DLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEFRKVSIAATIIYAYAWLVPLA 178
DLYGPFWICATL F +A++GNL+ L + + HY P+F KV++A IY YAWLVPLA
Sbjct: 120 DLYGPFWICATLAFVLAVTGNLTLVLAQRRDPSIHYSPQFHKVTVAGISIYCYAWLVPLA 179
Query: 179 LWGFLMWRNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWILVMIALGIS 238
LWGFL WR + Y+FLE VC+YGYSLF++IP +LW+IP ++W+ +ALG+S
Sbjct: 180 LWGFLRWRKGVQERMGPYTFLETVCIYGYSLFVFIPMVVLWLIPVPWLQWLFGALALGLS 239
Query: 239 GSLLAMTFWPAVREDNRRVALATIVTIVLLHMLLSVGCLAYFFDA---------PEMDHL 289
+ L T WP VRED R VA + +VLLH LL++GC YFF + P++ L
Sbjct: 240 AAGLVFTLWPVVREDTRLVATVLLSVVVLLHALLAMGCKLYFFQSLPPENVAPPPQITSL 299
Query: 290 PTTTA 294
P+ A
Sbjct: 300 PSNIA 304
>gi|31542713 MOCO sulphurase C-terminal domain containing 2 [Homo
sapiens]
Length = 335
Score = 40.8 bits (94), Expect = 0.002
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 216 AILWIIPQKAVRWILVM----IALGISGSLLAMTFWPAVREDNRRVALATIVTIVLLHML 271
A LWI P K+ + + V A+G+ L FW ++ED V +VL+ ++
Sbjct: 58 AKLWIYPVKSCKGVPVSEAECTAMGLRSGNLRDRFWLVIKEDGHMVTARQEPRLVLISII 117
Query: 272 LSVGCLAYFFDAPEMDHLPTTTATPN 297
CL F AP+MD L + P+
Sbjct: 118 YENNCL--IFRAPDMDQLVLPSKQPS 141
>gi|24497490 solute carrier family 22 member 4 [Homo sapiens]
Length = 551
Score = 40.4 bits (93), Expect = 0.002
Identities = 44/182 (24%), Positives = 81/182 (44%), Gaps = 28/182 (15%)
Query: 125 WICATLVFAIAISGNLSNFLIH--LGEKTYHYVPEFRKVSIAATIIYAYAW-LVPLALWG 181
W T++F I G +SN+++ LG + ++ +A + L+PL +
Sbjct: 193 WEMFTVLFVIVGMGQISNYVVAFILGTEILGKSVRIIFSTLGVCTFFAVGYMLLPLFAYF 252
Query: 182 FLMWRNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWI--LVMIALGISG 239
WR M +++ + ++CV L+ +IP + W+I Q+ R ++ A ++
Sbjct: 253 IRDWR----MLLLALTVPGVLCV---PLWWFIPESPRWLISQRRFREAEDIIQKAAKMNN 305
Query: 240 SLLAMTFWPAVREDN---------------RRVALATIVTIVLLHMLLSVGCLAYFFDAP 284
+ + +V E N R +A+ TI+++ LL ML SVG A DAP
Sbjct: 306 IAVPAVIFDSVEELNPLKQQKAFILDLFRTRNIAIMTIMSL-LLWMLTSVGYFALSLDAP 364
Query: 285 EM 286
+
Sbjct: 365 NL 366
>gi|49472828 natural killer cell-specific antigen KLIP1 [Homo
sapiens]
Length = 350
Score = 38.9 bits (89), Expect = 0.006
Identities = 69/286 (24%), Positives = 121/286 (42%), Gaps = 55/286 (19%)
Query: 13 GNAATSLTANPDATTVNIEDPGETPKH-------QPGSPRGSGREEDDELLGNDDSDKTE 65
G+A + D + + ED GE + + + EED E LG K +
Sbjct: 30 GSAVIDMENMDDTSGSSFEDMGELHQRLREEEVDADAADAAAAEEEDGEFLGMKGF-KGQ 88
Query: 66 LL---------AGQKKSSPFWTF----EYYQTFFDVDTYQVFDRIKGSLLPIPGKNFVRL 112
L AG++++S ++ + + +FDV+ QV R+ S++PI NF +
Sbjct: 89 LSRQVADQMWQAGKRQASRAFSLYANIDILRPYFDVEPAQVRSRLLESMIPIKMVNFPQ- 147
Query: 113 YIRSNPDLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEFRKVSIAATIIYAYA 172
+ +LYGP + TLV AI + G ++ I + E + A + Y
Sbjct: 148 --KIAGELYGPLMLVFTLV-AILLHGMKTSDTI---------IREGTLMGTAIGTCFGY- 194
Query: 173 WLVPLALWGFLMWR-NSKVMNIVSYSFLEIVCVYGYSLFIY-IPTAILWIIPQKAVRWIL 230
WL + FL + N+++ + L+++ + GY LF + I I + I A+ ++
Sbjct: 195 WLGVSSFIYFLAYLCNAQI------TMLQMLALLGYGLFGHCIVLFITYNIHLHALFYLF 248
Query: 231 VMIALGIS-----GSLLAMTFWPAVREDNRRVALATIVTIVLLHML 271
++ G+S L++ T P R L T+ LHML
Sbjct: 249 WLLVGGLSTLRMVAVLVSRTVGPTQR-------LLLCGTLAALHML 287
>gi|14150076 Yip1 domain family, member 4 [Homo sapiens]
Length = 244
Score = 38.5 bits (88), Expect = 0.008
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 40/129 (31%)
Query: 87 DVDTYQVFDRIKGSLLPIPGKNFVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFLIH 146
D+D ++ +I+ L+P+P F R +R NPD +GP A ++F IS
Sbjct: 82 DIDLKDIYYKIRCVLMPMPSLGFNRQVVRDNPDFWGPL---AVVLFFSMIS--------- 129
Query: 147 LGEKTYHYVPEFRKVSIAATIIYAYAWLVPLALWG----FLMWR-------NSKVMNIVS 195
+FR VS W++ + ++G FL+ R +V+ ++
Sbjct: 130 -------LYGQFRVVS----------WIITIWIFGSLTIFLLARVLGGEVAYGQVLGVIG 172
Query: 196 YSFLEIVCV 204
YS L ++ +
Sbjct: 173 YSLLPLIVI 181
>gi|50897270 olfactory receptor, family 8, subfamily K, member 1
[Homo sapiens]
Length = 319
Score = 36.2 bits (82), Expect = 0.037
Identities = 30/136 (22%), Positives = 58/136 (42%), Gaps = 11/136 (8%)
Query: 109 FVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEFRKVSIAATII 168
F+ + I NP L P + +++ + + GNL ++ + H F ++ T +
Sbjct: 18 FILMGITDNPGLQAPLFGLFLIIYLVTVIGNLGMVILTYLDSKLHTPMYFFLRHLSITDL 77
Query: 169 YAYAWLVPLALWGFLMWRNSKVMN----------IVSYSFLEIVCVYGYSLFIYIPTAIL 218
+ P L F++ +N+ N I S L I+ Y ++ I +L
Sbjct: 78 GYSTVIAPKMLVNFIVHKNTISYNWYATQLAFFEIFIISELFILSAMAYDRYVAICKPLL 137
Query: 219 W-IIPQKAVRWILVMI 233
+ II + V W+LV++
Sbjct: 138 YVIIMAEKVLWVLVIV 153
>gi|53933201 olfactory receptor, family 5, subfamily B, member 2
[Homo sapiens]
Length = 309
Score = 36.2 bits (82), Expect = 0.037
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 109 FVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEFRKVSIAATII 168
F+ L + S P+L P +I T ++ + + GNL L+ L + H P + +S + +
Sbjct: 10 FILLGLTSVPELQIPLFILFTFIYLLTLCGNLGMMLLILMDSCLH-TPMYFFLSNLSLVD 68
Query: 169 YAYAWLV-PLALWGFLMWRNSKVMN-----IVSYSFLEIVCVYGYSL 209
+ Y+ V P + GFL R KV++ + + F+ + V Y L
Sbjct: 69 FGYSSAVTPKVMAGFL--RGDKVISYNACAVQMFFFVALATVENYLL 113
>gi|53933282 olfactory receptor, family 6, subfamily C, member 65
[Homo sapiens]
Length = 312
Score = 35.4 bits (80), Expect = 0.064
Identities = 29/139 (20%), Positives = 59/139 (42%), Gaps = 16/139 (11%)
Query: 107 KNFVRLYIRSNPDLYGPFWICATLVFAIAISGN-------LSNFLIHLGEKTYHYVPEFR 159
+ F+ L NP+L + + + +++SGN LSN IHL Y ++ F
Sbjct: 8 REFILLGFTDNPELQVVIFFFMLITYLLSVSGNMIIIMLTLSN--IHLKTPMYFFLRNFS 65
Query: 160 KVSIAATIIYAYAWLVPLALWGFLMWRNSKVMNIVSYSFLE-----IVCVYGYSLFIYI- 213
+ I+ T ++ +L+ +A + N+ + + L ++ V Y ++ I
Sbjct: 66 FLEISFTTVFIPRFLINIATGDTTISYNASMAQVFFLILLGSTEFFLLAVMSYDRYVAIC 125
Query: 214 -PTAILWIIPQKAVRWILV 231
P I+ K W+++
Sbjct: 126 KPLHYTTIMSNKVCNWLVI 144
>gi|53828696 olfactory receptor, family 5, subfamily B, member 17
[Homo sapiens]
Length = 314
Score = 32.7 bits (73), Expect = 0.41
Identities = 20/76 (26%), Positives = 38/76 (50%)
Query: 109 FVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEFRKVSIAATII 168
F+ L + + P+L P +I TL++ I ++GNL ++ L + H F +++ I
Sbjct: 10 FILLGLTNAPELQVPLFIMFTLIYLITLTGNLGMIILILLDSHLHTPMYFFLSNLSLAGI 69
Query: 169 YAYAWLVPLALWGFLM 184
+ + P L G L+
Sbjct: 70 GYSSAVTPKVLTGLLI 85
>gi|196123588 NADH dehydrogenase subunit 4 [Homo sapiens
neanderthalensis]
Length = 459
Score = 32.0 bits (71), Expect = 0.70
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 14/78 (17%)
Query: 170 AYAWLVPLALWGFLMW-----RNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAILWIIPQK 224
AY +LV L+LWG +M R + + ++++YS + + + + TAIL P
Sbjct: 258 AYPFLV-LSLWGMIMTSSICLRQTDLKSLIAYSSISHMAL--------VVTAILIQTPWS 308
Query: 225 AVRWILVMIALGISGSLL 242
+++MIA G++ SLL
Sbjct: 309 FTGAVILMIAHGLTSSLL 326
>gi|251831116 NADH dehydrogenase subunit 4 [Homo sapiens]
Length = 459
Score = 32.0 bits (71), Expect = 0.70
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 14/78 (17%)
Query: 170 AYAWLVPLALWGFLMW-----RNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAILWIIPQK 224
AY +LV L+LWG +M R + + ++++YS + + + + TAIL P
Sbjct: 258 AYPFLV-LSLWGMIMTSSICLRQTDLKSLIAYSSISHMAL--------VVTAILIQTPWS 308
Query: 225 AVRWILVMIALGISGSLL 242
+++MIA G++ SLL
Sbjct: 309 FTGAVILMIAHGLTSSLL 326
>gi|53933268 olfactory receptor, family 6, subfamily C, member 74
[Homo sapiens]
Length = 312
Score = 32.0 bits (71), Expect = 0.70
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 108 NFVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFL-----IHLGEKTYHYVPEFRKVS 162
NF+ L + +P L ++ + ++I+GNL+ +HL Y ++ F +
Sbjct: 9 NFILLGLTDDPQLQVIIFLLLFFTYMLSITGNLTIITLTLLDLHLKTPMYFFLRNFSFLE 68
Query: 163 IAATIIYAYAWLVPLA 178
++ T +Y +LV +A
Sbjct: 69 VSFTTVYIPKFLVSMA 84
>gi|51173717 actin-binding LIM protein 1 isoform s [Homo sapiens]
Length = 455
Score = 32.0 bits (71), Expect = 0.70
Identities = 20/40 (50%), Positives = 20/40 (50%), Gaps = 15/40 (37%)
Query: 32 DPGETPK----HQPGSP-----------RGSGREEDDELL 56
DP ETPK H PG P R SGREEDDE L
Sbjct: 234 DPSETPKIETDHWPGPPSFAVVGPDMKRRSSGREEDDEEL 273
>gi|51173715 actin-binding LIM protein 1 isoform c [Homo sapiens]
Length = 746
Score = 32.0 bits (71), Expect = 0.70
Identities = 20/40 (50%), Positives = 20/40 (50%), Gaps = 15/40 (37%)
Query: 32 DPGETPK----HQPGSP-----------RGSGREEDDELL 56
DP ETPK H PG P R SGREEDDE L
Sbjct: 525 DPSETPKIETDHWPGPPSFAVVGPDMKRRSSGREEDDEEL 564
>gi|51173713 actin-binding LIM protein 1 isoform b [Homo sapiens]
Length = 718
Score = 32.0 bits (71), Expect = 0.70
Identities = 20/40 (50%), Positives = 20/40 (50%), Gaps = 15/40 (37%)
Query: 32 DPGETPK----HQPGSP-----------RGSGREEDDELL 56
DP ETPK H PG P R SGREEDDE L
Sbjct: 497 DPSETPKIETDHWPGPPSFAVVGPDMKRRSSGREEDDEEL 536
>gi|51173711 actin-binding LIM protein 1 isoform a [Homo sapiens]
Length = 778
Score = 32.0 bits (71), Expect = 0.70
Identities = 20/40 (50%), Positives = 20/40 (50%), Gaps = 15/40 (37%)
Query: 32 DPGETPK----HQPGSP-----------RGSGREEDDELL 56
DP ETPK H PG P R SGREEDDE L
Sbjct: 557 DPSETPKIETDHWPGPPSFAVVGPDMKRRSSGREEDDEEL 596
>gi|51230656 olfactory receptor, family 8, subfamily I, member 2
[Homo sapiens]
Length = 310
Score = 31.6 bits (70), Expect = 0.92
Identities = 34/158 (21%), Positives = 66/158 (41%), Gaps = 19/158 (12%)
Query: 106 GKNFVRLYI------RSNPDLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEFR 159
G NF + + ++P+L ++ ++ + GNL + + H F
Sbjct: 3 GNNFTEVTVFILSGFANHPELQVSLFLMFLFIYLFTVLGNLGLITLIRMDSQLHTPMYFF 62
Query: 160 KVSIAATIIYAYAWLVPLALWGFLMWRNSKVM---NIVSYSFLEIVCV-------YGYSL 209
++A I+ + + P AL F R S + Y F+ +VC Y+
Sbjct: 63 LSNLAFIDIFYSSTVTPKALVNFQSNRRSISFVGCFVQMYFFVGLVCCECFLLGSMAYNR 122
Query: 210 FIYIPTAILW--IIPQKAVRWILVM-IALGISGSLLAM 244
+I I +L+ ++ QK W+ VM +G + SL+++
Sbjct: 123 YIAICNPLLYSVVMSQKVSNWLGVMPYVIGFTSSLISV 160
>gi|23592222 olfactory receptor, family 5, subfamily P, member 2
[Homo sapiens]
Length = 322
Score = 31.6 bits (70), Expect = 0.92
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 12/132 (9%)
Query: 126 ICATLVFAIAISGNLS-NFLIHLGEKTYHYVPEFRKVSIAATIIYAYAWLVPLALWGFLM 184
I ++F I +SGNLS LI + + +H + F A + Y+ + + P L FL+
Sbjct: 25 ILRVILFMIILSGNLSIIILIRISSQLHHPMYFFLSHLAFADMAYSSS-VTPNMLVNFLV 83
Query: 185 WRNSK-----VMNIVSYSFLEIV-CV----YGYSLFIYIPTAILWIIPQKAVRWILVMIA 234
RN+ + + S +F V CV Y F+ I + +L+ + +++
Sbjct: 84 ERNTVSYLGCAIQLGSAAFFATVECVLLAAMAYDRFVAICSPLLYSTKMSTQVSVQLLLV 143
Query: 235 LGISGSLLAMTF 246
+ I+G L+A+++
Sbjct: 144 VYIAGFLIAVSY 155
>gi|91206450 ankyrin and armadillo repeat containing [Homo sapiens]
Length = 1363
Score = 31.2 bits (69), Expect = 1.2
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 9 FEEFGNAA-TSLTANPDATTVNIEDPGETPKHQPGSP 44
F EF +A T +T +PD + ED E P + P SP
Sbjct: 123 FSEFSSAGLTDITKDPDFNEIYDEDVNEDPTYDPNSP 159
>gi|50052934 olfactory receptor, family 1, subfamily Q, member 1
[Homo sapiens]
Length = 314
Score = 30.8 bits (68), Expect = 1.6
Identities = 22/72 (30%), Positives = 36/72 (50%)
Query: 108 NFVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEFRKVSIAATI 167
+FV L I ++P+ P ++ +L++AI ISGNL+ + L H ++A T
Sbjct: 11 HFVLLGISTHPEEQIPLFLVFSLMYAINISGNLAIITLILSAPRLHIPMYIFLSNLALTD 70
Query: 168 IYAYAWLVPLAL 179
I + VP L
Sbjct: 71 ICFTSTTVPKML 82
>gi|222080095 orexin receptor 1 [Homo sapiens]
Length = 425
Score = 30.4 bits (67), Expect = 2.0
Identities = 22/103 (21%), Positives = 44/103 (42%), Gaps = 6/103 (5%)
Query: 150 KTYHYVPEFRKVSIAATIIYAYAWLVPLALWGFLMWRNSKVMNIVSYSFLEIVCVYGYSL 209
+ Y Y ++ V IAA + LV L +WRN + + +Y + +
Sbjct: 37 RDYLYPKQYEWVLIAAYVAVFVVALVGNTLVCLAVWRNHHMRTVTNYFIVNLSLADVLVT 96
Query: 210 FIYIPTAIL------WIIPQKAVRWILVMIALGISGSLLAMTF 246
I +P ++L W+ + I + A+ +S ++L ++F
Sbjct: 97 AICLPASLLVDITESWLFGHALCKVIPYLQAVSVSVAVLTLSF 139
>gi|4505245 mannose receptor C type 1 precursor [Homo sapiens]
Length = 1456
Score = 30.4 bits (67), Expect = 2.0
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 259 LATIVTIVLLHMLLSVGCLAYFFDAPEMDHLPTTTATPNQTVAAAKSS 306
+A +V IV+L +L G AYFF HLP A N ++SS
Sbjct: 1388 VAGVVIIVILLILTGAGLAAYFFYKKRRVHLPQEGAFENTLYFNSQSS 1435
>gi|57546917 mannose receptor, C type 1-like 1 [Homo sapiens]
Length = 1456
Score = 30.4 bits (67), Expect = 2.0
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 259 LATIVTIVLLHMLLSVGCLAYFFDAPEMDHLPTTTATPNQTVAAAKSS 306
+A +V IV+L +L G AYFF HLP A N ++SS
Sbjct: 1388 VAGVVIIVILLILTGAGLAAYFFYKKRRVHLPQEGAFENTLYFNSQSS 1435
>gi|40807489 egf-like module containing, mucin-like, hormone
receptor-like sequence 1 [Homo sapiens]
Length = 886
Score = 30.0 bits (66), Expect = 2.7
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 171 YAWLVPLALWGFLMWRNSKVMNIVSYSFLEI--VCVYGYSLFIYIPTAILWIIPQ 223
+ W++ A+ FLM RN KV+N S +++ +C +GY L + + + PQ
Sbjct: 680 FFWMLVEAVILFLMVRNLKVVNYFSSRNIKMLHICAFGYGLPMLVVVISASVQPQ 734
>gi|14211873 emopamil binding related protein, delta8-delta7 sterol
isomerase [Homo sapiens]
Length = 206
Score = 29.6 bits (65), Expect = 3.5
Identities = 20/94 (21%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 126 ICATLVFAIAISGNLSNFLIHLGEKTYHYVPEFRKVSIAATIIYAYAWLVPLALWGFLMW 185
I + + +A+ G+L+ FLI+ K +Y F ++++ +Y W+ L W
Sbjct: 98 IVSVEILTVALDGSLALFLIYAIVKEKYY-RHFLQITLCVCELYG-CWMTFLPEW----L 151
Query: 186 RNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAILW 219
S +N ++ + + + +++ IP +LW
Sbjct: 152 TRSPNLNTSNWLYCWLYLFFFNGVWVLIPGLLLW 185
>gi|154240686 FYVE, RhoGEF and PH domain containing 6 [Homo sapiens]
Length = 1430
Score = 29.6 bits (65), Expect = 3.5
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Query: 17 TSLTANPDATTVNIEDPGETP--------KHQPGSPRGSGREEDDELLGNDDSDKTELL 67
+S + DA +E+P E P +HQ S S E++D LG+ SD+ E++
Sbjct: 780 SSSMEDADANVYEVEEPYEAPDGQLQLGPRHQHSSSGASQEEQNDLGLGDLPSDEEEII 838
>gi|4505445 neuropeptide Y receptor Y1 [Homo sapiens]
Length = 384
Score = 29.3 bits (64), Expect = 4.6
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 232 MIALGISGSLLAMTFWPAVREDNRRVALATIVTIVLLHMLLSVGCLAYFFDAPEMDH 288
+I LG+SG+L A+ +++ R V IV + +L+++ CL + F MDH
Sbjct: 50 VIILGVSGNL-ALIIIILKQKEMRNVTNILIVNLSFSDLLVAIMCLPFTFVYTLMDH 105
>gi|9961252 ATP-binding cassette, subfamily B, member 4 isoform C
[Homo sapiens]
Length = 1232
Score = 28.9 bits (63), Expect = 6.0
Identities = 27/123 (21%), Positives = 48/123 (39%), Gaps = 31/123 (25%)
Query: 47 SGREEDDELLGNDDSDKTELLAGQKKSSPFWTFEYYQTFFDVDTYQVFDRIKGSLLPIPG 106
SG E L GN DK EL A K ++ + + I+ +
Sbjct: 870 SGIVEMKLLAGNAKRDKKELEAAGKIAT-----------------EAIENIRTVVSLTQE 912
Query: 107 KNFVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEFRKVSIAAT 166
+ F +Y+ LYGP+ + + +VF G+ S+F P++ K ++A
Sbjct: 913 RKFESMYVEK---LYGPYRVFSAIVFGAVALGHASSF-----------APDYAKAKLSAA 958
Query: 167 IIY 169
++
Sbjct: 959 HLF 961
>gi|153945755 zinc finger protein 608 [Homo sapiens]
Length = 1512
Score = 28.9 bits (63), Expect = 6.0
Identities = 15/59 (25%), Positives = 27/59 (45%)
Query: 16 ATSLTANPDATTVNIEDPGETPKHQPGSPRGSGREEDDELLGNDDSDKTELLAGQKKSS 74
+ S + + A T G++ + +PG + S + D+ G DK +LL G + S
Sbjct: 167 SNSTSTSTSAATAGAGSCGKSKEEKPGKSQSSRGAKRDKDAGKSRKDKHDLLQGHQNGS 225
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.138 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,665,247
Number of Sequences: 37866
Number of extensions: 526027
Number of successful extensions: 1756
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1730
Number of HSP's gapped (non-prelim): 47
length of query: 306
length of database: 18,247,518
effective HSP length: 102
effective length of query: 204
effective length of database: 14,385,186
effective search space: 2934577944
effective search space used: 2934577944
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.