Search of human proteins with 18491024

Search of human proteins with 18491024

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|18491024 dipeptidyl peptidase III [Homo sapiens]
         (737 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|86792661 dipeptidyl peptidase III [Homo sapiens]                  1474   0.0  
gi|18491024 dipeptidyl peptidase III [Homo sapiens]                  1474   0.0  
gi|24308169 dynein, axonemal, heavy chain 3 [Homo sapiens]             31   3.6  
gi|194272142 myosin IXB isoform 2 [Homo sapiens]                       30   6.2  
gi|33356170 myosin IXB isoform 1 [Homo sapiens]                        30   6.2  
gi|148536873 NADPH oxidase 1 isoform long [Homo sapiens]               30   8.0  
gi|7669510 NADPH oxidase 1 isoform long variant [Homo sapiens]         30   8.0  
gi|197927452 dynein, axonemal, heavy chain 1 [Homo sapiens]            30   8.0  
gi|21955154 NLR family, pyrin domain containing 12 isoform 2 [Ho...    30   8.0  
gi|22003858 ventricular zone expressed PH domain homolog 1 [Homo...    30   8.0  

>gi|86792661 dipeptidyl peptidase III [Homo sapiens]
          Length = 737

 Score = 1474 bits (3816), Expect = 0.0
 Identities = 737/737 (100%), Positives = 737/737 (100%)

Query: 1   MADTQYILPNDIGVSSLDCREAFRLLSPTERLYAYHLSRAAWYGGLAVLLQTSPEAPYIY 60
           MADTQYILPNDIGVSSLDCREAFRLLSPTERLYAYHLSRAAWYGGLAVLLQTSPEAPYIY
Sbjct: 1   MADTQYILPNDIGVSSLDCREAFRLLSPTERLYAYHLSRAAWYGGLAVLLQTSPEAPYIY 60

Query: 61  ALLSRLFRAQDPDQLRQHALAEGLTEEEYQAFLVYAAGVYSNMGNYKSFGDTKFVPNLPK 120
           ALLSRLFRAQDPDQLRQHALAEGLTEEEYQAFLVYAAGVYSNMGNYKSFGDTKFVPNLPK
Sbjct: 61  ALLSRLFRAQDPDQLRQHALAEGLTEEEYQAFLVYAAGVYSNMGNYKSFGDTKFVPNLPK 120

Query: 121 EKLERVILGSEAAQQHPEEVRGLWQTCGELMFSLEPRLRHLGLGKEGITTYFSGNCTMED 180
           EKLERVILGSEAAQQHPEEVRGLWQTCGELMFSLEPRLRHLGLGKEGITTYFSGNCTMED
Sbjct: 121 EKLERVILGSEAAQQHPEEVRGLWQTCGELMFSLEPRLRHLGLGKEGITTYFSGNCTMED 180

Query: 181 AKLAQDFLDSQNLSAYNTRLFKEVDGEGKPYYEVRLASVLGSEPSLDSEVTSKLKSYEFR 240
           AKLAQDFLDSQNLSAYNTRLFKEVDGEGKPYYEVRLASVLGSEPSLDSEVTSKLKSYEFR
Sbjct: 181 AKLAQDFLDSQNLSAYNTRLFKEVDGEGKPYYEVRLASVLGSEPSLDSEVTSKLKSYEFR 240

Query: 241 GSPFQVTRGDYAPILQKVVEQLEKAKAYAANSHQGQMLAQYIESFTQGSIEAHKRGSRFW 300
           GSPFQVTRGDYAPILQKVVEQLEKAKAYAANSHQGQMLAQYIESFTQGSIEAHKRGSRFW
Sbjct: 241 GSPFQVTRGDYAPILQKVVEQLEKAKAYAANSHQGQMLAQYIESFTQGSIEAHKRGSRFW 300

Query: 301 IQDKGPIVESYIGFIESYRDPFGSRGEFEGFVAVVNKAMSAKFERLVASAEQLLKELPWP 360
           IQDKGPIVESYIGFIESYRDPFGSRGEFEGFVAVVNKAMSAKFERLVASAEQLLKELPWP
Sbjct: 301 IQDKGPIVESYIGFIESYRDPFGSRGEFEGFVAVVNKAMSAKFERLVASAEQLLKELPWP 360

Query: 361 PTFEKDKFLTPDFTSLDVLTFAGSGIPAGINIPNYDDLRQTEGFKNVSLGNVLAVAYATQ 420
           PTFEKDKFLTPDFTSLDVLTFAGSGIPAGINIPNYDDLRQTEGFKNVSLGNVLAVAYATQ
Sbjct: 361 PTFEKDKFLTPDFTSLDVLTFAGSGIPAGINIPNYDDLRQTEGFKNVSLGNVLAVAYATQ 420

Query: 421 REKLTFLEEDDKDLYILWKGPSFDVQVGLHELLGHGSGKLFVQDEKGAFNFDQETVINPE 480
           REKLTFLEEDDKDLYILWKGPSFDVQVGLHELLGHGSGKLFVQDEKGAFNFDQETVINPE
Sbjct: 421 REKLTFLEEDDKDLYILWKGPSFDVQVGLHELLGHGSGKLFVQDEKGAFNFDQETVINPE 480

Query: 481 TGEQIQSWYRSGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGFEGADAEDVIY 540
           TGEQIQSWYRSGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGFEGADAEDVIY
Sbjct: 481 TGEQIQSWYRSGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGFEGADAEDVIY 540

Query: 541 VNWLNMVRAGLLALEFYTPEAFNWRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPD 600
           VNWLNMVRAGLLALEFYTPEAFNWRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPD
Sbjct: 541 VNWLNMVRAGLLALEFYTPEAFNWRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPD 600

Query: 601 ARVRLDRSKIRSVGKPALERFLRRLQVLKSTGDVAGGRALYEGYATVTDAPPECFLTLRD 660
           ARVRLDRSKIRSVGKPALERFLRRLQVLKSTGDVAGGRALYEGYATVTDAPPECFLTLRD
Sbjct: 601 ARVRLDRSKIRSVGKPALERFLRRLQVLKSTGDVAGGRALYEGYATVTDAPPECFLTLRD 660

Query: 661 TVLLRKESRKLIVQPNTRLEGSDVQLLEYEASAAGLIRSFSERFPEDGPELEEILTQLAT 720
           TVLLRKESRKLIVQPNTRLEGSDVQLLEYEASAAGLIRSFSERFPEDGPELEEILTQLAT
Sbjct: 661 TVLLRKESRKLIVQPNTRLEGSDVQLLEYEASAAGLIRSFSERFPEDGPELEEILTQLAT 720

Query: 721 ADARFWKGPSEAPSGQA 737
           ADARFWKGPSEAPSGQA
Sbjct: 721 ADARFWKGPSEAPSGQA 737


>gi|18491024 dipeptidyl peptidase III [Homo sapiens]
          Length = 737

 Score = 1474 bits (3816), Expect = 0.0
 Identities = 737/737 (100%), Positives = 737/737 (100%)

Query: 1   MADTQYILPNDIGVSSLDCREAFRLLSPTERLYAYHLSRAAWYGGLAVLLQTSPEAPYIY 60
           MADTQYILPNDIGVSSLDCREAFRLLSPTERLYAYHLSRAAWYGGLAVLLQTSPEAPYIY
Sbjct: 1   MADTQYILPNDIGVSSLDCREAFRLLSPTERLYAYHLSRAAWYGGLAVLLQTSPEAPYIY 60

Query: 61  ALLSRLFRAQDPDQLRQHALAEGLTEEEYQAFLVYAAGVYSNMGNYKSFGDTKFVPNLPK 120
           ALLSRLFRAQDPDQLRQHALAEGLTEEEYQAFLVYAAGVYSNMGNYKSFGDTKFVPNLPK
Sbjct: 61  ALLSRLFRAQDPDQLRQHALAEGLTEEEYQAFLVYAAGVYSNMGNYKSFGDTKFVPNLPK 120

Query: 121 EKLERVILGSEAAQQHPEEVRGLWQTCGELMFSLEPRLRHLGLGKEGITTYFSGNCTMED 180
           EKLERVILGSEAAQQHPEEVRGLWQTCGELMFSLEPRLRHLGLGKEGITTYFSGNCTMED
Sbjct: 121 EKLERVILGSEAAQQHPEEVRGLWQTCGELMFSLEPRLRHLGLGKEGITTYFSGNCTMED 180

Query: 181 AKLAQDFLDSQNLSAYNTRLFKEVDGEGKPYYEVRLASVLGSEPSLDSEVTSKLKSYEFR 240
           AKLAQDFLDSQNLSAYNTRLFKEVDGEGKPYYEVRLASVLGSEPSLDSEVTSKLKSYEFR
Sbjct: 181 AKLAQDFLDSQNLSAYNTRLFKEVDGEGKPYYEVRLASVLGSEPSLDSEVTSKLKSYEFR 240

Query: 241 GSPFQVTRGDYAPILQKVVEQLEKAKAYAANSHQGQMLAQYIESFTQGSIEAHKRGSRFW 300
           GSPFQVTRGDYAPILQKVVEQLEKAKAYAANSHQGQMLAQYIESFTQGSIEAHKRGSRFW
Sbjct: 241 GSPFQVTRGDYAPILQKVVEQLEKAKAYAANSHQGQMLAQYIESFTQGSIEAHKRGSRFW 300

Query: 301 IQDKGPIVESYIGFIESYRDPFGSRGEFEGFVAVVNKAMSAKFERLVASAEQLLKELPWP 360
           IQDKGPIVESYIGFIESYRDPFGSRGEFEGFVAVVNKAMSAKFERLVASAEQLLKELPWP
Sbjct: 301 IQDKGPIVESYIGFIESYRDPFGSRGEFEGFVAVVNKAMSAKFERLVASAEQLLKELPWP 360

Query: 361 PTFEKDKFLTPDFTSLDVLTFAGSGIPAGINIPNYDDLRQTEGFKNVSLGNVLAVAYATQ 420
           PTFEKDKFLTPDFTSLDVLTFAGSGIPAGINIPNYDDLRQTEGFKNVSLGNVLAVAYATQ
Sbjct: 361 PTFEKDKFLTPDFTSLDVLTFAGSGIPAGINIPNYDDLRQTEGFKNVSLGNVLAVAYATQ 420

Query: 421 REKLTFLEEDDKDLYILWKGPSFDVQVGLHELLGHGSGKLFVQDEKGAFNFDQETVINPE 480
           REKLTFLEEDDKDLYILWKGPSFDVQVGLHELLGHGSGKLFVQDEKGAFNFDQETVINPE
Sbjct: 421 REKLTFLEEDDKDLYILWKGPSFDVQVGLHELLGHGSGKLFVQDEKGAFNFDQETVINPE 480

Query: 481 TGEQIQSWYRSGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGFEGADAEDVIY 540
           TGEQIQSWYRSGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGFEGADAEDVIY
Sbjct: 481 TGEQIQSWYRSGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGFEGADAEDVIY 540

Query: 541 VNWLNMVRAGLLALEFYTPEAFNWRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPD 600
           VNWLNMVRAGLLALEFYTPEAFNWRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPD
Sbjct: 541 VNWLNMVRAGLLALEFYTPEAFNWRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPD 600

Query: 601 ARVRLDRSKIRSVGKPALERFLRRLQVLKSTGDVAGGRALYEGYATVTDAPPECFLTLRD 660
           ARVRLDRSKIRSVGKPALERFLRRLQVLKSTGDVAGGRALYEGYATVTDAPPECFLTLRD
Sbjct: 601 ARVRLDRSKIRSVGKPALERFLRRLQVLKSTGDVAGGRALYEGYATVTDAPPECFLTLRD 660

Query: 661 TVLLRKESRKLIVQPNTRLEGSDVQLLEYEASAAGLIRSFSERFPEDGPELEEILTQLAT 720
           TVLLRKESRKLIVQPNTRLEGSDVQLLEYEASAAGLIRSFSERFPEDGPELEEILTQLAT
Sbjct: 661 TVLLRKESRKLIVQPNTRLEGSDVQLLEYEASAAGLIRSFSERFPEDGPELEEILTQLAT 720

Query: 721 ADARFWKGPSEAPSGQA 737
           ADARFWKGPSEAPSGQA
Sbjct: 721 ADARFWKGPSEAPSGQA 737


>gi|24308169 dynein, axonemal, heavy chain 3 [Homo sapiens]
          Length = 4116

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 7/90 (7%)

Query: 423  KLTFLEE--DDKDLYILWKGPSFDVQVGLHELLGHGSGKLFVQDEKGAFNFD---QETVI 477
            +LTF +E  D     + W    +  Q  L  +  + + K  +  +   F F+   QETV+
Sbjct: 3948 RLTFFQEWIDKGPPVVFWISGFYFTQSFLTGVSQNYARKYTIPIDHIGFEFEVTPQETVM 4007

Query: 478  --NPETGEQIQSWYRSGETWDSKFSTIASS 505
              NPE G  I+  +  G  WD K   I  S
Sbjct: 4008 ENNPEDGAYIKGLFLEGARWDRKTMQIGES 4037


>gi|194272142 myosin IXB isoform 2 [Homo sapiens]
          Length = 2022

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 3/58 (5%)

Query: 247  TRGDYAPILQKVVEQLEKAKAYAANSHQGQMLAQYIESFTQGSIEAHKRGSRFWIQDK 304
            T+ D+ P+ Q   ++ ++ +  A   H G + A Y  S  Q   +     S  W+ DK
Sbjct: 1604 TKNDFEPVKQSKAQKKKRKQERAVQEHNGHVFASYQVSIPQSCEQCL---SYIWLMDK 1658


>gi|33356170 myosin IXB isoform 1 [Homo sapiens]
          Length = 2157

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 3/58 (5%)

Query: 247  TRGDYAPILQKVVEQLEKAKAYAANSHQGQMLAQYIESFTQGSIEAHKRGSRFWIQDK 304
            T+ D+ P+ Q   ++ ++ +  A   H G + A Y  S  Q   +     S  W+ DK
Sbjct: 1604 TKNDFEPVKQSKAQKKKRKQERAVQEHNGHVFASYQVSIPQSCEQCL---SYIWLMDK 1658


>gi|148536873 NADPH oxidase 1 isoform long [Homo sapiens]
          Length = 564

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 8/53 (15%)

Query: 468 AFNFDQETVINPETG-EQIQSWYRSGETWDSKFSTIASSYEECRAESVGLYLC 519
           A NFD+ T I   TG +Q  S+ R    WD++FSTIA+S+ +     VG++LC
Sbjct: 486 ALNFDKATDI--VTGLKQKTSFGRP--MWDNEFSTIATSHPK---SVVGVFLC 531


>gi|7669510 NADPH oxidase 1 isoform long variant [Homo sapiens]
          Length = 515

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 8/53 (15%)

Query: 468 AFNFDQETVINPETG-EQIQSWYRSGETWDSKFSTIASSYEECRAESVGLYLC 519
           A NFD+ T I   TG +Q  S+ R    WD++FSTIA+S+ +     VG++LC
Sbjct: 437 ALNFDKATDI--VTGLKQKTSFGRP--MWDNEFSTIATSHPK---SVVGVFLC 482


>gi|197927452 dynein, axonemal, heavy chain 1 [Homo sapiens]
          Length = 4265

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 5/77 (6%)

Query: 178  MEDAKLAQDFLDSQNLSAYNTRLFKEVDGEGKPYYEVRLASVLGSEPSLDSEVTSKLKSY 237
            + +AK+ Q+  D ++   Y          EG P  ++ L  VL +     +E+ +K++  
Sbjct: 3378 ISNAKMRQELKDIEDQILYRLS-----SSEGNPVDDMELIKVLEASKMKAAEIQAKVRIA 3432

Query: 238  EFRGSPFQVTRGDYAPI 254
            E       +TR +Y P+
Sbjct: 3433 EQTEKDIDLTRMEYIPV 3449


>gi|21955154 NLR family, pyrin domain containing 12 isoform 2 [Homo
           sapiens]
          Length = 1061

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 46/214 (21%), Positives = 81/214 (37%), Gaps = 36/214 (16%)

Query: 142 GLWQTCGELMFSLEPRLRHLGLGKEGITTYFSGNCTMEDAKLAQDF----LDSQNLSAYN 197
           GLW    +++F  E  LR  GL  E ++ + + N   +D    + +    L  Q   A  
Sbjct: 468 GLWNQ--KILFE-EQDLRKHGLDGEDVSAFLNMNIFQKDINCERYYSFIHLSFQEFFAAM 524

Query: 198 TRLFKEVDGEGKPYYEVRLASVLGSEPSLDSEVTSKLKSYEFRGSPFQV--TRGDYAPIL 255
             +  E +G   P                D +VT  L  Y F    F    +R  +  + 
Sbjct: 525 YYILDEGEGGAGP----------------DQDVTRLLTEYAFSERSFLALTSRFLFGLLN 568

Query: 256 QKVVEQLEKAKAYAANSHQGQMLAQYIESFTQGSIEAHKRGSRFWIQDKGPIVESYIGFI 315
           ++    LEK+  +  + H    L Q+I+S  Q      ++GS          +E +    
Sbjct: 569 EETRSHLEKSLCWKVSPHIKMDLLQWIQSKAQSDGSTLQQGS----------LEFFSCLY 618

Query: 316 ESYRDPFGSRGEFEGFVAVVNKAMSAKFERLVAS 349
           E   + F  +     F  +V   +++K E +V+S
Sbjct: 619 EIQEEEFIQQA-LSHFQVIVVSNIASKMEHMVSS 651


>gi|22003858 ventricular zone expressed PH domain homolog 1 [Homo
           sapiens]
          Length = 833

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 12/97 (12%)

Query: 66  LFRAQDPDQLRQHALAEGLTEEEYQAFLVYAAGVYSNMGNYKSFGDTKFVPNLPKEKLER 125
           L RA D   L    + + LTE   Q  ++      S+  +Y++  + + V  +   ++  
Sbjct: 14  LSRAGDLFSLDDSEIEDSLTEALEQIKII------SSSSDYQTNNNDQAVVEICITRITT 67

Query: 126 VILGSEAAQQHPEEVRGLWQTCGELMFSLEPRLRHLG 162
            I  +E+ ++H + + GLW +C      LE  LR  G
Sbjct: 68  AIRETESIEKHAKALVGLWDSC------LEHNLRPFG 98


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.135    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,167,771
Number of Sequences: 37866
Number of extensions: 1278168
Number of successful extensions: 2653
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2644
Number of HSP's gapped (non-prelim): 18
length of query: 737
length of database: 18,247,518
effective HSP length: 110
effective length of query: 627
effective length of database: 14,082,258
effective search space: 8829575766
effective search space used: 8829575766
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.