BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|18379334 RNA-binding protein S1, serine-rich domain [Homo sapiens] (305 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|6857826 RNA-binding protein S1, serine-rich domain [Homo sapi... 603 e-173 gi|18379334 RNA-binding protein S1, serine-rich domain [Homo sap... 603 e-173 gi|169166609 PREDICTED: similar to ribonucleic acid binding prot... 591 e-169 gi|113415994 PREDICTED: similar to ribonucleic acid binding prot... 591 e-169 gi|113415504 PREDICTED: similar to ribonucleic acid binding prot... 589 e-168 gi|169166499 PREDICTED: similar to ribonucleic acid binding prot... 589 e-168 gi|113415498 PREDICTED: similar to ribonucleic acid binding prot... 589 e-168 gi|88973230 PREDICTED: similar to ribonucleic acid binding prote... 589 e-168 gi|33356174 pinin, desmosome associated protein [Homo sapiens] 90 2e-18 gi|47271443 splicing factor, arginine/serine-rich 2 [Homo sapiens] 84 2e-16 gi|40807452 peroxisome proliferator-activated receptor gamma, co... 83 3e-16 gi|4759098 splicing factor, arginine/serine-rich 10 [Homo sapiens] 82 8e-16 gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens] 81 1e-15 gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens] 78 9e-15 gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 76 3e-14 gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] 76 4e-14 gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens] 76 4e-14 gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] 75 6e-14 gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 74 1e-13 gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 74 1e-13 gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 74 1e-13 gi|9558733 transformer-2 alpha [Homo sapiens] 74 2e-13 gi|4506901 splicing factor, arginine/serine-rich 3 [Homo sapiens] 72 5e-13 gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 71 1e-12 gi|14790190 spen homolog, transcriptional regulator [Homo sapiens] 70 2e-12 gi|224548936 hypothetical protein LOC100170229 [Homo sapiens] 69 4e-12 gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithor... 69 5e-12 gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi... 69 5e-12 gi|15055543 splicing factor, arginine/serine-rich 2B [Homo sapiens] 69 7e-12 gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo s... 69 7e-12 >gi|6857826 RNA-binding protein S1, serine-rich domain [Homo sapiens] Length = 305 Score = 603 bits (1555), Expect = e-173 Identities = 305/305 (100%), Positives = 305/305 (100%) Query: 1 MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD 60 MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD Sbjct: 1 MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD 60 Query: 61 KTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS 120 KTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS Sbjct: 61 KTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS 120 Query: 121 SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI 180 SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI Sbjct: 121 SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI 180 Query: 181 FSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLA 240 FSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLA Sbjct: 181 FSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLA 240 Query: 241 PWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS 300 PWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS Sbjct: 241 PWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS 300 Query: 301 SNSSR 305 SNSSR Sbjct: 301 SNSSR 305 >gi|18379334 RNA-binding protein S1, serine-rich domain [Homo sapiens] Length = 305 Score = 603 bits (1555), Expect = e-173 Identities = 305/305 (100%), Positives = 305/305 (100%) Query: 1 MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD 60 MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD Sbjct: 1 MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD 60 Query: 61 KTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS 120 KTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS Sbjct: 61 KTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS 120 Query: 121 SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI 180 SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI Sbjct: 121 SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI 180 Query: 181 FSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLA 240 FSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLA Sbjct: 181 FSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLA 240 Query: 241 PWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS 300 PWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS Sbjct: 241 PWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS 300 Query: 301 SNSSR 305 SNSSR Sbjct: 301 SNSSR 305 >gi|169166609 PREDICTED: similar to ribonucleic acid binding protein S1 isoform 6 [Homo sapiens] Length = 305 Score = 591 bits (1523), Expect = e-169 Identities = 300/305 (98%), Positives = 301/305 (98%) Query: 1 MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD 60 MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD Sbjct: 1 MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD 60 Query: 61 KTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS 120 KTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS Sbjct: 61 KTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS 120 Query: 121 SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI 180 SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI Sbjct: 121 SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI 180 Query: 181 FSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLA 240 FSTYGKIKMIDMPVERMHPHLSKGYA VEFENPDEAEKALKHMDGGQIDGQEITAT VLA Sbjct: 181 FSTYGKIKMIDMPVERMHPHLSKGYACVEFENPDEAEKALKHMDGGQIDGQEITATVVLA 240 Query: 241 PWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS 300 PWPRP PRRFSPPRRMLPPPPMW RSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS Sbjct: 241 PWPRPTPRRFSPPRRMLPPPPMWLRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS 300 Query: 301 SNSSR 305 SNSS+ Sbjct: 301 SNSSQ 305 >gi|113415994 PREDICTED: similar to ribonucleic acid binding protein S1 isoform 2 [Homo sapiens] Length = 305 Score = 591 bits (1523), Expect = e-169 Identities = 300/305 (98%), Positives = 301/305 (98%) Query: 1 MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD 60 MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD Sbjct: 1 MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD 60 Query: 61 KTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS 120 KTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS Sbjct: 61 KTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS 120 Query: 121 SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI 180 SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI Sbjct: 121 SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI 180 Query: 181 FSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLA 240 FSTYGKIKMIDMPVERMHPHLSKGYA VEFENPDEAEKALKHMDGGQIDGQEITAT VLA Sbjct: 181 FSTYGKIKMIDMPVERMHPHLSKGYACVEFENPDEAEKALKHMDGGQIDGQEITATVVLA 240 Query: 241 PWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS 300 PWPRP PRRFSPPRRMLPPPPMW RSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS Sbjct: 241 PWPRPTPRRFSPPRRMLPPPPMWLRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS 300 Query: 301 SNSSR 305 SNSS+ Sbjct: 301 SNSSQ 305 >gi|113415504 PREDICTED: similar to ribonucleic acid binding protein S1 [Homo sapiens] Length = 305 Score = 589 bits (1518), Expect = e-168 Identities = 299/305 (98%), Positives = 300/305 (98%) Query: 1 MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD 60 MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD Sbjct: 1 MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD 60 Query: 61 KTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS 120 KTRKR SASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS Sbjct: 61 KTRKRHSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS 120 Query: 121 SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI 180 SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI Sbjct: 121 SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI 180 Query: 181 FSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLA 240 FSTYGKIKMIDMPVERMHPHLSKGYA VEFENPDEAEKALKHMDGGQIDGQEITAT VLA Sbjct: 181 FSTYGKIKMIDMPVERMHPHLSKGYACVEFENPDEAEKALKHMDGGQIDGQEITATVVLA 240 Query: 241 PWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS 300 PWPRP PRRFSPPRRMLPPPPMW RSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS Sbjct: 241 PWPRPTPRRFSPPRRMLPPPPMWLRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS 300 Query: 301 SNSSR 305 SNSS+ Sbjct: 301 SNSSQ 305 >gi|169166499 PREDICTED: similar to ribonucleic acid binding protein S1 [Homo sapiens] Length = 305 Score = 589 bits (1518), Expect = e-168 Identities = 299/305 (98%), Positives = 300/305 (98%) Query: 1 MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD 60 MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD Sbjct: 1 MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD 60 Query: 61 KTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS 120 KTRKR SASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS Sbjct: 61 KTRKRHSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS 120 Query: 121 SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI 180 SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI Sbjct: 121 SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI 180 Query: 181 FSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLA 240 FSTYGKIKMIDMPVERMHPHLSKGYA VEFENPDEAEKALKHMDGGQIDGQEITAT VLA Sbjct: 181 FSTYGKIKMIDMPVERMHPHLSKGYACVEFENPDEAEKALKHMDGGQIDGQEITATVVLA 240 Query: 241 PWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS 300 PWPRP PRRFSPPRRMLPPPPMW RSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS Sbjct: 241 PWPRPTPRRFSPPRRMLPPPPMWLRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS 300 Query: 301 SNSSR 305 SNSS+ Sbjct: 301 SNSSQ 305 >gi|113415498 PREDICTED: similar to ribonucleic acid binding protein S1 [Homo sapiens] Length = 305 Score = 589 bits (1518), Expect = e-168 Identities = 299/305 (98%), Positives = 300/305 (98%) Query: 1 MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD 60 MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD Sbjct: 1 MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD 60 Query: 61 KTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS 120 KTRKR SASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS Sbjct: 61 KTRKRHSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS 120 Query: 121 SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI 180 SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI Sbjct: 121 SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI 180 Query: 181 FSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLA 240 FSTYGKIKMIDMPVERMHPHLSKGYA VEFENPDEAEKALKHMDGGQIDGQEITAT VLA Sbjct: 181 FSTYGKIKMIDMPVERMHPHLSKGYACVEFENPDEAEKALKHMDGGQIDGQEITATVVLA 240 Query: 241 PWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS 300 PWPRP PRRFSPPRRMLPPPPMW RSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS Sbjct: 241 PWPRPTPRRFSPPRRMLPPPPMWLRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS 300 Query: 301 SNSSR 305 SNSS+ Sbjct: 301 SNSSQ 305 >gi|88973230 PREDICTED: similar to ribonucleic acid binding protein S1 isoform 3 [Homo sapiens] Length = 305 Score = 589 bits (1518), Expect = e-168 Identities = 299/305 (98%), Positives = 300/305 (98%) Query: 1 MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD 60 MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD Sbjct: 1 MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD 60 Query: 61 KTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS 120 KTRKR SASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS Sbjct: 61 KTRKRHSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS 120 Query: 121 SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI 180 SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI Sbjct: 121 SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI 180 Query: 181 FSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLA 240 FSTYGKIKMIDMPVERMHPHLSKGYA VEFENPDEAEKALKHMDGGQIDGQEITAT VLA Sbjct: 181 FSTYGKIKMIDMPVERMHPHLSKGYACVEFENPDEAEKALKHMDGGQIDGQEITATVVLA 240 Query: 241 PWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS 300 PWPRP PRRFSPPRRMLPPPPMW RSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS Sbjct: 241 PWPRPTPRRFSPPRRMLPPPPMWLRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS 300 Query: 301 SNSSR 305 SNSS+ Sbjct: 301 SNSSQ 305 >gi|33356174 pinin, desmosome associated protein [Homo sapiens] Length = 717 Score = 90.1 bits (222), Expect = 2e-18 Identities = 61/121 (50%), Positives = 73/121 (60%), Gaps = 9/121 (7%) Query: 35 SDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSS 94 S K+K RS+ +G R R+KT K RS SS SSS+ S S+S+SS SS+S SS Sbjct: 552 SKSKTKTRSRSRG---------RARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSS 602 Query: 95 SGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRR 154 S SSSSS+SS SGSSS SSS+SSSS S S SR R NR R +S KR + R Sbjct: 603 SRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSVDRKRRDTSGLER 662 Query: 155 S 155 S Sbjct: 663 S 663 Score = 78.6 bits (192), Expect = 7e-15 Identities = 55/114 (48%), Positives = 70/114 (61%), Gaps = 7/114 (6%) Query: 49 TKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGS 108 T K + + ++R R A + +S +RSRSSS+SSS SS+ST SSSGSSSSS SS S S Sbjct: 547 TVHPESKSKTKTRSRSRGRARNKTSKSRSRSSSSSSS-SSSSTSSSSGSSSSSGSSSSRS 605 Query: 109 SSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEK-----ERKRRSPS 157 SS+S SSS+S SS S S + RSRS+ + RD K +RKRR S Sbjct: 606 SSSS-SSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSVDRKRRDTS 658 Score = 62.4 bits (150), Expect = 5e-10 Identities = 51/154 (33%), Positives = 71/154 (46%), Gaps = 13/154 (8%) Query: 27 SPTKRKDRSDEKSKDRSK-DKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSS 85 S +K K RS + + R+K K ++ SS T +SS S S+ SRSSS+SSS Sbjct: 552 SKSKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSS 611 Query: 86 GSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPK 145 S+SGSSS +SS + SSS SRS S RR D +RR S Sbjct: 612 -------STSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSVDRKRRDTS-----G 659 Query: 146 RDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIME 179 + + + S + TK + +R+ K I E Sbjct: 660 LERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISE 693 Score = 58.9 bits (141), Expect = 5e-09 Identities = 51/157 (32%), Positives = 71/157 (45%), Gaps = 32/157 (20%) Query: 27 SPTKRKDRSDEKSKDR-SKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSS 85 S TK + RS +++++ SK + + SS + S+SSGSSS+RS SSS+SS+ Sbjct: 554 SKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSST 613 Query: 86 GSSTSTGSSSGSSSSSASSRSGS----------------------SSTSRSSSSSSSSGS 123 S+S SSS S+SSS+ SRS S S RS SS S Sbjct: 614 SGSSSRDSSS-STSSSSESRSRSRGRGHNRDRKHRRSVDRKRRDTSGLERSHKSSKGGSS 672 Query: 124 PSPSRRRHDNRRRSRSKS--------KPPKRDEKERK 152 + N R R +S K R E++RK Sbjct: 673 RDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRK 709 Score = 49.7 bits (117), Expect = 3e-06 Identities = 45/137 (32%), Positives = 58/137 (42%), Gaps = 8/137 (5%) Query: 4 SGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTR 63 S S G ++ SS+R+ S + S S+D S ++ ES + RGR R Sbjct: 584 SSSSTSSSSGSSSSSGSSSSRSSSSSS-SSTSGSSSRDSSSSTSSSSESRSRSRGRGHNR 642 Query: 64 KRRSASSGSSSTR-----SRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSS 118 R+ S R RS +S GSS T S +S S RS S S SRS S Sbjct: 643 DRKHRRSVDRKRRDTSGLERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISES-SRSGKRS 701 Query: 119 SSSGSPSPSRRRHDNRR 135 S S S R+ D RR Sbjct: 702 SRSERDRKSDRK-DKRR 717 Score = 47.0 bits (110), Expect = 2e-05 Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 14/152 (9%) Query: 15 KENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGAT--KESSEKDRGRDKTRKRRSASSGS 72 + KS +R+ S + S S S G++ + SS + R S+SS S Sbjct: 567 RNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTS 626 Query: 73 SSTRSRSSSTSSSGS---------STSTGSSSGSSSSSASSRSGSSSTSRSS--SSSSSS 121 SS+ SRS S + +SG S SS+ GSS ++ S +S S Sbjct: 627 SSSESRSRSRGRGHNRDRKHRRSVDRKRRDTSGLERSHKSSKGGSSRDTKGSKDKNSRSD 686 Query: 122 GSPSPSRRRHDNRRRSRSKSKPPKRDEKERKR 153 S S +R SRS+ + K D K+++R Sbjct: 687 RKRSISESSRSGKRSSRSE-RDRKSDRKDKRR 717 >gi|47271443 splicing factor, arginine/serine-rich 2 [Homo sapiens] Length = 221 Score = 83.6 bits (205), Expect = 2e-16 Identities = 55/145 (37%), Positives = 78/145 (53%), Gaps = 8/145 (5%) Query: 161 TKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKAL 220 T + + LT + D + +F YG++ + +P +R + S+G+A+V F + +AE A+ Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR-YTKESRGFAFVRFHDKRDAEDAM 72 Query: 221 KHMDGGQIDGQEITATAVLAPWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRR 280 MDG +DG+E+ +A + RPP S R PPP R RRSRSPRRR Sbjct: 73 DAMDGAVLDGRELRVQ--MARYGRPPDSHHS---RRGPPPR--RYGGGGYGRRSRSPRRR 125 Query: 281 SPVRRRSRSPGRRRHRSRSSSNSSR 305 R RSRS R R RSR S + SR Sbjct: 126 RRSRSRSRSRSRSRSRSRYSRSKSR 150 Score = 63.9 bits (154), Expect = 2e-10 Identities = 52/129 (40%), Positives = 66/129 (51%), Gaps = 13/129 (10%) Query: 22 STRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSS 81 S R P P +R + RS + S + R R ++R R S S S TRSRS S Sbjct: 101 SRRGPPP-RRYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRS 159 Query: 82 TSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKS 141 TS S S+ + S SS+ SRS S S SRS S S P P +R +++ RSRSKS Sbjct: 160 TSKSRSARRS-----KSKSSSVSRSRSRSRSRSRSRS-----PPPVSKR-ESKSRSRSKS 208 Query: 142 KPPKRDEKE 150 PPK E+E Sbjct: 209 -PPKSPEEE 216 Score = 61.2 bits (147), Expect = 1e-09 Identities = 46/105 (43%), Positives = 53/105 (50%), Gaps = 13/105 (12%) Query: 57 RGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSS 116 R R R+RRS S S +RSRS S S S S SRS S+S SRS+ Sbjct: 118 RSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSR----------TRSRSRSTSKSRSAR 167 Query: 117 SSSSSGSPSPSRRRHDNRRRSRSKSKPP--KRDEKERKRRSPSPK 159 S S S S SR R +R RSRS+S PP KR+ K R R PK Sbjct: 168 RSKSKSS-SVSRSRSRSRSRSRSRSPPPVSKRESKSRSRSKSPPK 211 Score = 49.7 bits (117), Expect = 3e-06 Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 10/105 (9%) Query: 24 RAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKR---------RSASSGSSS 74 R+ SP +R+ RS +S+ RS+ + ++ S K R R ++R R RS S SS Sbjct: 118 RSRSPRRRR-RSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKSSSV 176 Query: 75 TRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSS 119 +RSRS S S S S + S S S + S+S S + SS Sbjct: 177 SRSRSRSRSRSRSRSPPPVSKRESKSRSRSKSPPKSPEEEGAVSS 221 Score = 37.0 bits (84), Expect = 0.022 Identities = 27/66 (40%), Positives = 32/66 (48%) Query: 92 GSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKER 151 G S S RS S S SRS S S S S S SR R +R RS SKS+ +R + + Sbjct: 114 GYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKS 173 Query: 152 KRRSPS 157 S S Sbjct: 174 SSVSRS 179 Score = 37.0 bits (84), Expect = 0.022 Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 3/88 (3%) Query: 7 KKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRR 66 + +S + +S TR+ S + K RS +SK +S + S + R R ++R Sbjct: 137 RSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKS---SSVSRSRSRSRSRSRSRSPP 193 Query: 67 SASSGSSSTRSRSSSTSSSGSSTSTGSS 94 S S +RSRS S S SS Sbjct: 194 PVSKRESKSRSRSKSPPKSPEEEGAVSS 221 Score = 28.5 bits (62), Expect = 7.7 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 5/67 (7%) Query: 105 RSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVH 164 RS S R S S S S S S SR R+ SRSKS+ R +S S + +K Sbjct: 118 RSRSPRRRRRSRSRSRSRSRSRSRSRY-----SRSKSRSRTRSRSRSTSKSRSARRSKSK 172 Query: 165 IGRLTRN 171 ++R+ Sbjct: 173 SSSVSRS 179 >gi|40807452 peroxisome proliferator-activated receptor gamma, coactivator-related 1 [Homo sapiens] Length = 1664 Score = 83.2 bits (204), Expect = 3e-16 Identities = 69/222 (31%), Positives = 104/222 (46%), Gaps = 32/222 (14%) Query: 22 STRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSS 81 +TR P K RS + + + + + RGR+ RS SSGS+ T SSS Sbjct: 1388 NTRTPPEPSAKQRSMRCYRKACRSASPSSQGWQGRRGRNS----RSVSSGSNRTSEASSS 1443 Query: 82 TSSSGSST--------------------STGSSSGSSSSSASSRSGSSSTSRSSSSSSSS 121 +SSS SS+ S+G S SSSS+SS S SSS+S SSSS S S Sbjct: 1444 SSSSSSSSRSRSRSLSPPHKRWRRSSCSSSGRSRRCSSSSSSSSSSSSSSSSSSSSRSRS 1503 Query: 122 GSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIF 181 SPSP RR RR S +S + ++ ++ + V IG++ +T+ + + F Sbjct: 1504 RSPSPRRRSDRRRRYSSYRSHDHYQRQRVLQKERAIEERRVVFIGKIPGRMTRSELKQRF 1563 Query: 182 STYGKIK--MIDMPVERMHPHLSKGYAYVEFENPDEAEKALK 221 S +G+I+ I V+ Y +V + +EA A++ Sbjct: 1564 SVFGEIEECTIHFRVQ------GDNYGFVTYRYAEEAFAAIE 1599 Score = 29.6 bits (65), Expect = 3.5 Identities = 24/68 (35%), Positives = 25/68 (36%), Gaps = 14/68 (20%) Query: 251 SPPRRMLPPPPMWRRSPPRMRRRSR--------------SPRRRSPVRRRSRSPGRRRHR 296 S R + PP WRRS RSR S S R RSRSP RR Sbjct: 1453 SRSRSLSPPHKRWRRSSCSSSGRSRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRS 1512 Query: 297 SRSSSNSS 304 R SS Sbjct: 1513 DRRRRYSS 1520 Score = 28.5 bits (62), Expect = 7.7 Identities = 17/33 (51%), Positives = 17/33 (51%) Query: 266 SPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSR 298 S R R RS SPRRRS RRR S H R Sbjct: 1497 SSSRSRSRSPSPRRRSDRRRRYSSYRSHDHYQR 1529 >gi|4759098 splicing factor, arginine/serine-rich 10 [Homo sapiens] Length = 288 Score = 81.6 bits (200), Expect = 8e-16 Identities = 63/194 (32%), Positives = 91/194 (46%), Gaps = 19/194 (9%) Query: 71 GSSSTRSRSSSTSSSGSSTS---TGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPS 127 G +RS S S S+ GS S T + S S S SRS S S S S S S S + Sbjct: 10 GERESRSASRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRSRRSSRRHYT 69 Query: 128 RRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPT-KVHIGR--------------LTRNV 172 R R +R RS+S+ RD + R S SP T + H+G L+ Sbjct: 70 RSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYT 129 Query: 173 TKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQE 232 T+ + E+FS YG I + + V S+G+A+V FEN D+A++A + +G ++DG+ Sbjct: 130 TERDLREVFSKYGPIADVSI-VYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRR 188 Query: 233 ITATAVLAPWPRPP 246 I + P P Sbjct: 189 IRVDFSITKRPHTP 202 Score = 34.7 bits (78), Expect = 0.11 Identities = 26/61 (42%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Query: 249 RFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSP----VRRRSRSPGRRRHRSRSSSNSS 304 R +P R RS R R SRS RRS R RSRS RR RSRS S Sbjct: 31 RHTPARSRSKEDSRRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSRDY 90 Query: 305 R 305 R Sbjct: 91 R 91 >gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens] Length = 1007 Score = 81.3 bits (199), Expect = 1e-15 Identities = 92/307 (29%), Positives = 116/307 (37%), Gaps = 52/307 (16%) Query: 2 DLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRG--- 58 D + K L + K R+P+ K K KSKDR K ES +DRG Sbjct: 234 DQARKSKSPTLRRRSQEKIGKARSPTDDKVKIEDKSKSKDRKKSP-IINESRSRDRGKKS 292 Query: 59 ------RDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTS 112 R K++ RRS S S RS + S S +SSG + S S R G S Sbjct: 293 RSPVDLRGKSKDRRSRSKERKSKRSETDKEKKPIKSPSKDASSGKENRSPSRRPGRSPKR 352 Query: 113 RSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNV 172 RS SP P D RRSRS P D + ++ +SPS Sbjct: 353 RSL-------SPKP----RDKSRRSRS---PLLNDRRSKQSKSPS--------------- 383 Query: 173 TKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQE 232 S + K + +R P + + D + + D I+ Sbjct: 384 ------RTLSPGRRAKSRSLERKRREPERRRLSSPRTRPRDDILSRRERSKDASPINRWS 437 Query: 233 ITATAVLAPWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGR 292 T +P R R SP RR P RR RRR R R RS +RRRSRS G Sbjct: 438 PTRRRSRSPIRR---RSRSPLRRSRSP----RRRSRSPRRRDRGRRSRSRLRRRSRSRGG 490 Query: 293 RRHRSRS 299 RR RSRS Sbjct: 491 RRRRSRS 497 Score = 66.2 bits (160), Expect = 3e-11 Identities = 90/322 (27%), Positives = 128/322 (39%), Gaps = 50/322 (15%) Query: 18 NKKSSTRAPSPTKRKDRSDEKSKDRSKDKGA-------TKESSEKDRGRDKTRKRRSAS- 69 + K +T+ S ++ K+R+ +S D+ K KG T S K+R + K+ +RS S Sbjct: 175 DNKITTKKRSKSRSKERTRHRS-DKKKSKGGIEIVKEKTTRSKSKERKKSKSPSKRSKSQ 233 Query: 70 -----SGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSP 124 S S + R RS S + S + R S + S S S Sbjct: 234 DQARKSKSPTLRRRSQEKIGKARSPTDDKVKIEDKSKSKDRKKSPIINESRSRDRGKKSR 293 Query: 125 SPSRRRHDNR-RRSRSKSKPPKRDEKERKRRSPSPKPTK-VHIGRLTRNVTKDHIMEIFS 182 SP R ++ RRSRSK + KR E +++++ P P+K G+ R+ ++ Sbjct: 294 SPVDLRGKSKDRRSRSKERKSKRSETDKEKK-PIKSPSKDASSGKENRSPSRRPGRSPKR 352 Query: 183 TYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLAPW 242 K D P L+ D K K G+ + ++ Sbjct: 353 RSLSPKPRDKSRRSRSPLLN-----------DRRSKQSKSPSRTLSPGRRAKSRSLERKR 401 Query: 243 PRPPPRRFSPPR------------RMLPPPPMWRRSPPRMRRRSRSP---RRRSPVRRRS 287 P RR S PR R P+ R SP R RRSRSP R RSP+RR S Sbjct: 402 REPERRRLSSPRTRPRDDILSRRERSKDASPINRWSPTR--RRSRSPIRRRSRSPLRR-S 458 Query: 288 RSPGRR----RHRSRSSSNSSR 305 RSP RR R R R + SR Sbjct: 459 RSPRRRSRSPRRRDRGRRSRSR 480 Score = 60.1 bits (144), Expect = 2e-09 Identities = 73/281 (25%), Positives = 108/281 (38%), Gaps = 37/281 (13%) Query: 46 KGATKESSEKDRGRDKTRKRRSASSGSSSTRSR---------SSSTSSSGSSTSTGSSSG 96 +G S E+ +K R +S+ SSST+ + + S S S T S Sbjct: 138 QGYESGSEEEGEIHEKARNGNRSSTRSSSTKGKLELVDNKITTKKRSKSRSKERTRHRSD 197 Query: 97 SSSSSASSRSGSSSTSRSSSSS-SSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRS 155 S T+RS S S SPS + D R+S+S + + EK K RS Sbjct: 198 KKKSKGGIEIVKEKTTRSKSKERKKSKSPSKRSKSQDQARKSKSPTLRRRSQEKIGKARS 257 Query: 156 PSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFEN--- 212 P+ K+ +++ K I+ + + K PV+ + E ++ Sbjct: 258 PTDDKVKIEDKSKSKDRKKSPIINESRSRDRGKKSRSPVDLRGKSKDRRSRSKERKSKRS 317 Query: 213 -PDEAEKALKHMDGGQIDGQEITATAVLAPWPRPPPRR--FSPPRRMLPPPPMWRRSPPR 269 D+ +K +K G+E R P RR SP RR L P P + Sbjct: 318 ETDKEKKPIKSPSKDASSGKE----------NRSPSRRPGRSPKRRSLSPKPRDK----- 362 Query: 270 MRRRSRSPRRRSPVRRRSRSPGR-----RRHRSRSSSNSSR 305 RRSRSP ++S+SP R RR +SRS R Sbjct: 363 -SRRSRSPLLNDRRSKQSKSPSRTLSPGRRAKSRSLERKRR 402 Score = 45.4 bits (106), Expect = 6e-05 Identities = 42/132 (31%), Positives = 54/132 (40%), Gaps = 4/132 (3%) Query: 15 KENNKKSSTRAPSPTKR-KDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSS 73 + KS +R SP +R K RS E+ + ++ + SS + R RD RR S +S Sbjct: 375 RSKQSKSPSRTLSPGRRAKSRSLERKR---REPERRRLSSPRTRPRDDILSRRERSKDAS 431 Query: 74 STRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDN 133 S + S S S S S + R S R S S SR R Sbjct: 432 PINRWSPTRRRSRSPIRRRSRSPLRRSRSPRRRSRSPRRRDRGRRSRSRLRRRSRSRGGR 491 Query: 134 RRRSRSKSKPPK 145 RRRSRSK K K Sbjct: 492 RRRSRSKVKEDK 503 Score = 35.8 bits (81), Expect = 0.048 Identities = 40/173 (23%), Positives = 61/173 (35%), Gaps = 4/173 (2%) Query: 8 KKSLLGVKENNKKSST-RAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRR 66 + +L +E +K +S SPT+R+ RS + + RS + + R + R RR Sbjct: 417 RDDILSRRERSKDASPINRWSPTRRRSRSPIRRRSRSPLRRSRSPRRRSRSPRRRDRGRR 476 Query: 67 SASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSP 126 S S +RSR S S GS S SSS + Sbjct: 477 SRSRLRRRSRSRGGRRRRSRSKVKEDKFKGSLSEGMKVEQESSS---DDNLEDFDVEEED 533 Query: 127 SRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIME 179 + RR R + E S +P+ TR+ + D I+E Sbjct: 534 EEALIEQRRIQRQAIVQKYKYLAEDSNMSVPSEPSSPQSSTRTRSPSPDDILE 586 >gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens] Length = 953 Score = 78.2 bits (191), Expect = 9e-15 Identities = 61/147 (41%), Positives = 79/147 (53%), Gaps = 5/147 (3%) Query: 19 KKSSTRAPSPTKRKDRSDEKSKDRS-KDKGATKESSEKDRGRDKTRKRRSASSGSSSTRS 77 K+++T P + + D + +S K K S + R R KT +++S SS + S Sbjct: 500 KEAATTGPQVKRADEWKDPWRRSKSPKKKLGVSVSPSRARRRRKTSASSASASNSSRSSS 559 Query: 78 RSSSTSSSGSSTSTG-SSSGSSSSSASSRSGSSSTSRSSSSS-SSSGSPSPSRRRHDNRR 135 RSSS S SGSS S SSS SS SS SSR S S SRS S S SSS SPSP+ H Sbjct: 560 RSSSYSGSGSSRSRSRSSSYSSYSSRSSRHSSFSGSRSRSRSFSSSPSPSPTPSPHRPSI 619 Query: 136 RSRSKSKPP--KRDEKERKRRSPSPKP 160 R++ + PP K EK K+ +P P P Sbjct: 620 RTKGEPAPPPGKAGEKSVKKPAPPPAP 646 Score = 59.7 bits (143), Expect = 3e-09 Identities = 51/159 (32%), Positives = 77/159 (48%), Gaps = 17/159 (10%) Query: 6 VKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKR 65 VKK + K++ P PTK D + + K+R + R +T Sbjct: 637 VKKPAPPPAPPQATKTTAPVPEPTKPGDPREARRKERPA----------RTPPRRRTLSG 686 Query: 66 RSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSS--SSSSSGS 123 + SGSS + S S S S S SS S+ SS+ SSSSSA S + +S SS+SS S Sbjct: 687 SGSGSGSSYSGSSSRSRSLSVSSVSSVSSATSSSSSAHSVDSEDMYADLASPVSSASSRS 746 Query: 124 PSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTK 162 P+P++ R+ + KSK ++E+++R S +P K Sbjct: 747 PAPAQ-----TRKEKGKSKKEDGVKEEKRKRDSSTQPPK 780 Score = 56.6 bits (135), Expect = 3e-08 Identities = 51/155 (32%), Positives = 70/155 (45%), Gaps = 32/155 (20%) Query: 31 RKDRSDEKSKDRSKDKGATKESSEKDRGRD-KTRKRRSASSGSSSTR------------- 76 R+ R ++ K+R K+KG K S + R + K+ +A++G R Sbjct: 465 RQHRDRDREKEREKEKGKPKPRSPQPPSRQAEPPKKEAATTGPQVKRADEWKDPWRRSKS 524 Query: 77 -------SRSSSTSSSGSSTSTGSSSGSSSSSASSRSGS---SSTSRSSSSSSSSGSPSP 126 S S S + TS S+S S+SS +SSRS S S +SRS S SSS S S Sbjct: 525 PKKKLGVSVSPSRARRRRKTSASSASASNSSRSSSRSSSYSGSGSSRSRSRSSSYSSYSS 584 Query: 127 SRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPT 161 RH + SRS+S+ SPSP PT Sbjct: 585 RSSRHSSFSGSRSRSR--------SFSSSPSPSPT 611 Score = 41.6 bits (96), Expect = 9e-04 Identities = 52/303 (17%), Positives = 97/303 (32%), Gaps = 18/303 (5%) Query: 17 NNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTR 76 N ++ ++++R E+ +DR +++ + E++ RDK R+RR R Sbjct: 400 NYRERERERERENRQRERERERERDRERERRQREREREREHERDKERQRRKEE--WERER 457 Query: 77 SRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRR 136 ++ RS + ++ + + P +R D + Sbjct: 458 AKRDEKDRQHRDRDREKEREKEKGKPKPRSPQPPSRQAEPPKKEAATTGPQVKRADEWKD 517 Query: 137 SRSKSKPPKR--------DEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIK 188 +SK PK+ R+R++ + + + R + + + + Sbjct: 518 PWRRSKSPKKKLGVSVSPSRARRRRKTSASSASASNSSRSSSRSSSYSGSGSSRSRSRSS 577 Query: 189 MIDMPVERMHPHL----SKGYAYVEFENPDEAEKALKHMDGGQIDGQEI----TATAVLA 240 R H S+ + +P + H + G+ A Sbjct: 578 SYSSYSSRSSRHSSFSGSRSRSRSFSSSPSPSPTPSPHRPSIRTKGEPAPPPGKAGEKSV 637 Query: 241 PWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS 300 P PPP + P P + PR RR P R P RR G S S Sbjct: 638 KKPAPPPAPPQATKTTAPVPEPTKPGDPREARRKERPARTPPRRRTLSGSGSGSGSSYSG 697 Query: 301 SNS 303 S+S Sbjct: 698 SSS 700 Score = 38.1 bits (87), Expect = 0.010 Identities = 31/165 (18%), Positives = 62/165 (37%), Gaps = 16/165 (9%) Query: 21 SSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSS 80 +S+R+P+P + + K K +SK + KE K + K +G S++ S+ Sbjct: 742 ASSRSPAPAQTR-----KEKGKSKKEDGVKEEKRKRDSSTQPPKSAKPPAGGKSSQQPST 796 Query: 81 STSSSGSSTSTGSS-----------SGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRR 129 + G+ + ++ + R S R S + + SP R Sbjct: 797 PQQAPPGQPQQGTFVAHKEIKLTLLNKAADKGSRKRYEPSDKDRQSPPPAKRPNTSPDRG 856 Query: 130 RHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTK 174 D + R S P+R + + +P K + +++ +K Sbjct: 857 SRDRKSGGRLGSPKPERQRGQNSKAPAAPADRKRQLSPQSKSSSK 901 Score = 33.9 bits (76), Expect = 0.18 Identities = 53/304 (17%), Positives = 99/304 (32%), Gaps = 34/304 (11%) Query: 29 TKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSS 88 T+ + + + ++R +++ + E++R RD+ R+RR R Sbjct: 393 TETEPYHNYRERERERERENRQRERERERERDRERERRQREREREREHERDKERQRRKEE 452 Query: 89 TSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKP--PKR 146 + SP P R+ + ++ + + P + Sbjct: 453 WERERAKRDEKDRQHRDRDREKEREKEKGKPKPRSPQPPSRQAEPPKKEAATTGPQVKRA 512 Query: 147 DE-KERKRRSPSPK-----PTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPH 200 DE K+ RRS SPK R R + S+ + Sbjct: 513 DEWKDPWRRSKSPKKKLGVSVSPSRARRRRKTSASSASASNSSRSSSRSSSYSGSGSSRS 572 Query: 201 LSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLAPWPRPPPRRFSPPRRMLPPP 260 S+ +Y + + ++ +H + + ++ +P P P P R S + P P Sbjct: 573 RSRSSSYSSY-----SSRSSRHSSFSGSRSRSRSFSSSPSPSPTPSPHRPSIRTKGEPAP 627 Query: 261 PMWRR------------SPPRMRR---------RSRSPRRRSPVRRRSRSPGRRRHRSRS 299 P + +PP+ + + PR R +R+P RRR S S Sbjct: 628 PPGKAGEKSVKKPAPPPAPPQATKTTAPVPEPTKPGDPREARRKERPARTPPRRRTLSGS 687 Query: 300 SSNS 303 S S Sbjct: 688 GSGS 691 Score = 32.3 bits (72), Expect = 0.54 Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 2/102 (1%) Query: 32 KDRSDEKSKDRSKDKGATKESSEKDRG-RDKTRKRRSASSGSSSTRSRSSSTSSSGSSTS 90 + R + KDR A + ++ DRG RD+ R S R ++S ++ + Sbjct: 830 RKRYEPSDKDRQSPPPAKRPNTSPDRGSRDRKSGGRLGSPKPERQRGQNSKAPAAPADRK 889 Query: 91 TGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHD 132 S S SSS + S S ++S+ SG S RR + Sbjct: 890 RQLSPQSKSSSKVT-SVPGKASDPGAASTKSGKASTLSRREE 930 Score = 32.0 bits (71), Expect = 0.70 Identities = 47/206 (22%), Positives = 71/206 (34%), Gaps = 55/206 (26%) Query: 131 HDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMI 190 H+ R R R + + ++ E+ER+R + + + R ++H Sbjct: 399 HNYRERERERERENRQRERERERERDRERERR----QREREREREH-------------- 440 Query: 191 DMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLAPWPRPPPRRF 250 ER + + E E EK +H D + +E P+PP R+ Sbjct: 441 ----ERDKERQRRKEEW-ERERAKRDEKDRQHRDRDREKEREKEKGKPKPRSPQPPSRQA 495 Query: 251 SPPRRMLPPP-----------PMWRRS------------PPRMRRRSRSPRRRSPVRRRS 287 PP++ WRRS P R RRR ++ + S Sbjct: 496 EPPKKEAATTGPQVKRADEWKDPWRRSKSPKKKLGVSVSPSRARRRRKTSASSASASNSS 555 Query: 288 RS---------PGRRRHRSRSSSNSS 304 RS G R RSRSSS SS Sbjct: 556 RSSSRSSSYSGSGSSRSRSRSSSYSS 581 >gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] Length = 2752 Score = 76.3 bits (186), Expect = 3e-14 Identities = 55/159 (34%), Positives = 72/159 (45%), Gaps = 12/159 (7%) Query: 10 SLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKR---- 65 +L KE SS+ + S + S S S + E S + KR Sbjct: 2523 ALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSP 2582 Query: 66 --------RSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSS 117 R + R +SSS SS+S+ SSS SSSSS+SS S SSS+S SSSS Sbjct: 2583 TPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2642 Query: 118 SSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSP 156 SSSS SPSP++ + S KPP + + R R P Sbjct: 2643 SSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKP 2681 Score = 73.9 bits (180), Expect = 2e-13 Identities = 54/124 (43%), Positives = 70/124 (56%), Gaps = 12/124 (9%) Query: 48 ATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSG 107 A KE+ + R + T +R S SSS+ S SSS+SSS SS+S+ SSS SSSSS+SS S Sbjct: 2585 APKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-SS 2643 Query: 108 SSSTSRSSSSSSSSGSPSPS--RRRHDNRRRSRSKSKP--PKRDEK-------ERKRRSP 156 SSS+S S + P P+ ++ RRSRS KP RD + ER+R SP Sbjct: 2644 SSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSP 2703 Query: 157 SPKP 160 P P Sbjct: 2704 QPSP 2707 Score = 73.2 bits (178), Expect = 3e-13 Identities = 82/306 (26%), Positives = 119/306 (38%), Gaps = 36/306 (11%) Query: 8 KKSLLGVKENNKKSSTRAPSPTKRKDRS-DEKSKDRS--KDKGATKESSEKD-RGRDKTR 63 ++S G + + +P D S D K+K R+ + + + S E D + R R Sbjct: 1535 QRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPR 1594 Query: 64 KRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSS-SASSRSGSSSTSRSSS---SSS 119 + RS SS + R++ + SGS +S + + + SRSGSSS R S SSS Sbjct: 1595 RSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSS 1654 Query: 120 SSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIME 179 + SP + RR SRS +P + +RRS P RL+R Sbjct: 1655 TESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRR------SR 1708 Query: 180 IFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVL 239 S+ + + P R P +S +P+ AEK+ T+ Sbjct: 1709 SASSSPETRSRTPPRHRRSPSVS---------SPEPAEKSRSSRRRRSASSPRTKTTSRR 1759 Query: 240 APWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRS 299 P P PR +RS R RR RR S+S RRR RSRS Sbjct: 1760 GRSPSPKPRGL-------------QRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRS 1806 Query: 300 SSNSSR 305 S +R Sbjct: 1807 RSRVTR 1812 Score = 72.0 bits (175), Expect = 6e-13 Identities = 89/306 (29%), Positives = 124/306 (40%), Gaps = 34/306 (11%) Query: 19 KKSSTRAPSPTKRKDRSDEK-------SKDRSKDKGATKESSEKDRGRDKTRK-RRSASS 70 ++ +R+ +P +R RS + S+ R+ +G ++ S RGR +R +R S Sbjct: 665 RRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRS 724 Query: 71 GSSSTRSRSSSTSSSGS-STSTGSSSGSSSSSASSRSGSSSTSRSSSSSS-----SSGSP 124 GSSS R S TS S S S+ S SS SRS SS S++ S S S SP Sbjct: 725 GSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSP 784 Query: 125 SPSRRRHDNRRRSRSKSKPPKRDEKERKRR-----SPSPKPTKVHIGRLTRNVTKDHIME 179 P ++ RRSRS S PK + RR SP PK R + + + H Sbjct: 785 CPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKV 844 Query: 180 IFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKA---LKHMDGGQIDGQEITAT 236 T + I P + + E +PD K+ +H G + ++T Sbjct: 845 KSGTPPRQGSITSPQANEQSVTPQRRSCFE-SSPDPELKSRTPSRHSCSGSSPPRVKSST 903 Query: 237 AVLAPWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHR 296 PPR+ SP R P P + PR R S S SP R SR+ RR Sbjct: 904 ---------PPRQ-SPSRSSSPQPKVKAIISPRQRSHSGS-SSPSPSRVTSRTTPRRSRS 952 Query: 297 SRSSSN 302 SN Sbjct: 953 VSPCSN 958 Score = 67.8 bits (164), Expect = 1e-11 Identities = 87/316 (27%), Positives = 130/316 (41%), Gaps = 46/316 (14%) Query: 15 KENNKKSSTRAPSPTK-RKDRSDE-KSKDRSKDKGATKESSEKDRGRDKTRKRR-SASSG 71 K+++KK R+ S +K RK RS KSK +SKDK + S + + R SA S Sbjct: 210 KKSSKKKKHRSESESKKRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSA 269 Query: 72 SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSG----------SSSTSRSSSSSSSS 121 SSS SRS S S++ + T T + +G S S AS R G ++ST R SS +++ Sbjct: 270 SSSDTSRSRSRSAA-AKTHTTALAGRSPSPASGRRGEGDAPFSEPGTTSTQRPSSPETAT 328 Query: 122 GSPSPSRRRHDNRRRSRSKSKP---PKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIM 178 PS D ++ +S ++P P+R + +P+P + H G T Sbjct: 329 KQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQ 388 Query: 179 EIFSTYGKIKMI-DMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATA 237 E + + D + L + + + K +H +++ Sbjct: 389 EPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRH-----------ASSS 437 Query: 238 VLAPWPRPPPRRFSPPRRMLPPPPMWRRS-------------PPRMRRRSRSPRRRSPVR 284 +P P P P R + P RS P R RSRSP R Sbjct: 438 PESPKPAPAP---GSHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGR 494 Query: 285 RRSRSPGRRRH-RSRS 299 RSR+P +R H RSRS Sbjct: 495 SRSRTPTKRGHSRSRS 510 Score = 67.0 bits (162), Expect = 2e-11 Identities = 85/322 (26%), Positives = 126/322 (39%), Gaps = 44/322 (13%) Query: 7 KKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKR- 65 KKK E++ R S K+K RS+ +SK R K + T +S K + DK RKR Sbjct: 192 KKKDRGRRSESSSPRRERKKSSKKKKHRSESESKKR-KHRSPTPKSKRKSK--DKKRKRS 248 Query: 66 ---------------RSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSS 110 SA S SSS SRS S S++ + T T + +G S S AS R G Sbjct: 249 RSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAA-AKTHTTALAGRSPSPASGRRGEGD 307 Query: 111 TSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTR 170 S ++S+ PS ++ S + +D+KE+ PSP P + G Sbjct: 308 APFSEPGTTSTQRPSSPETA---TKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEPP 364 Query: 171 NVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDG 230 T + + + E ++P P EA + Sbjct: 365 APTPLLAERHGGSPQPLATTPLSQEPVNP-------------PSEASPTRDRSPPKSPEK 411 Query: 231 QEITATAVLAPWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSP--RRRSPVRRR-- 286 ++++ +P P P P + S P P +P R S SP + RS R + Sbjct: 412 LPQSSSSESSP-PSPQPTKVSRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRD 470 Query: 287 ---SRSPGRRRHRSRSSSNSSR 305 S +P RR RSRS + + R Sbjct: 471 KSHSHTPSRRMGRSRSPATAKR 492 Score = 67.0 bits (162), Expect = 2e-11 Identities = 83/300 (27%), Positives = 119/300 (39%), Gaps = 27/300 (9%) Query: 24 RAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTS 83 R+PS + + +S R + + + + RGR + K R S +RSR T Sbjct: 1726 RSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQR--SRSRSRREKTR 1783 Query: 84 SSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSS---SSSGSPSPSRRRHDNRRRSRSK 140 ++ +GSS +S SRS S T R S S S + S R RRR RS+ Sbjct: 1784 TTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSR 1843 Query: 141 SKPPKRDEKERKRRSPSP-KPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHP 199 + P R ++ R R SP+P K ++ T ++ I + + + R Sbjct: 1844 TPPTSR-KRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRS 1902 Query: 200 HLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLAPWPRPPPRRFSPP----RR 255 S + A + + + P R R +PP R Sbjct: 1903 RTS----VTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRS 1958 Query: 256 MLPPPPMWR-----RSPPRMRRRSRSPRRRSPV-RRRSRS----PGRRRHRSRSSSNSSR 305 PP+ R R+ P RRRSRS R SPV RRRSRS RRR RSR+S + R Sbjct: 1959 RSRTPPVTRRRSRSRTSPITRRRSRS--RTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRR 2016 Score = 65.9 bits (159), Expect = 4e-11 Identities = 75/306 (24%), Positives = 125/306 (40%), Gaps = 71/306 (23%) Query: 19 KKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKT-------------RKR 65 ++ +R+ +P +R+ RS ++ RS+ ++ + + R R +T R+ Sbjct: 580 RRGRSRSRTPARRRSRSRTPTRRRSR----SRTPARRGRSRSRTPARRRSRTRSPVRRRS 635 Query: 66 RSASSGSSSTRSRSSSTSSSGSSTS-TGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSP 124 RS S S RSRS + + G S S T + G S S +R S SR+ + S S Sbjct: 636 RSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSR 695 Query: 125 SPSRRRHDNR---RRSRSKSKPPKR-----DEKERKRRSPSPKPTKVHIGRLTRNVTKDH 176 +P R R +R RR RS S+ P+R ERK +S + + R +R+ + Sbjct: 696 TPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQ-------RRSRSNSSPE 748 Query: 177 IMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 236 + + + + + + P + LS + + G Sbjct: 749 MKKSRISSRRSRSLSSPRSKAKSRLS----------------LRRSLSGSS--------- 783 Query: 237 AVLAPWPRPPPRRFSPPRRM---LPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRR 293 P P + +PPRR P R+PPR R S SP P +++S++P R+ Sbjct: 784 ------PCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSP----PPKQKSKTPSRQ 833 Query: 294 RHRSRS 299 H S S Sbjct: 834 SHSSSS 839 Score = 64.7 bits (156), Expect = 1e-10 Identities = 78/303 (25%), Positives = 126/303 (41%), Gaps = 25/303 (8%) Query: 22 STRAPSPTKRKDRSDEKSKDRSKDKGA----TKESSEKDRGRDKTRKRRSASSGSSSTRS 77 S + S ++R+ RS +S+ + +G ++ + ++ R +R+RR S ++R Sbjct: 1791 SGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRK 1850 Query: 78 RSSSTSS--------SGSSTSTGSSSGSSSSSASSRSGSSSTS-----RSSSSSSSSGSP 124 RS S +S S +S +T S S + S R S TS RS S +S + Sbjct: 1851 RSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRR 1910 Query: 125 SPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTY 184 S SR +RRRSRS++ PP + R R + + ++ +TR ++ + T Sbjct: 1911 SRSRASPVSRRRSRSRT-PPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPV--TR 1967 Query: 185 GKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLAPWPR 244 + + P+ R S+ + + + +T + P Sbjct: 1968 RRSRSRTSPITRRRSR-SRTSPVTRRRSRSRTSPVTRRRSRSRT--SPVTRRRSRSRTPP 2024 Query: 245 PPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRS--PRRRSPVRRRSRSPGRRRHRSRSSSN 302 RR +LP RSP +RRRSRS PR R +RSP R RS S S+ Sbjct: 2025 AIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPAIRRRSASGSS 2084 Query: 303 SSR 305 S R Sbjct: 2085 SDR 2087 Score = 59.3 bits (142), Expect = 4e-09 Identities = 70/252 (27%), Positives = 93/252 (36%), Gaps = 56/252 (22%) Query: 68 ASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPS 127 AS+G+ + ++ + +S+ SSS SSSSS+SS S SSS+S SSSS S GS P Sbjct: 2511 ASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPV 2570 Query: 128 RRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKI 187 + R S P E R+ R P P P K R R+ + S+ Sbjct: 2571 Q---PEVALKRVPSPTPAPKEAVREGRPPEPTPAK----RKRRSSSSSSSSSSSSSSSSS 2623 Query: 188 KMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLAPWPRPPP 247 S + +P A+ P P+ P Sbjct: 2624 SSSSSSSSSSSSSSSSSSSSSSSSSPSPAK-----------------------PGPQALP 2660 Query: 248 RRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRR------------RSPVRRR--SRSPGRR 293 + SP + PP RRSRSPR+ SPV RR S P R Sbjct: 2661 KPASP------------KKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPR 2708 Query: 294 RHRSRSSSNSSR 305 +S SS SR Sbjct: 2709 DQQSSSSERGSR 2720 Score = 58.9 bits (141), Expect = 5e-09 Identities = 91/309 (29%), Positives = 121/309 (39%), Gaps = 30/309 (9%) Query: 20 KSSTRAPSPTKRKDRSDEK--SKDRSKDKGATKESSEKDRGRDKTRKRRS--ASSGSSST 75 K+ +R P P +R RS + K R + + SS + R R R RRS SS + Sbjct: 1679 KTKSRTP-PRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAE 1737 Query: 76 RSRSSSTSSSGSS--TSTGSSSGSSSSS-------ASSRSGSSSTSRSSSSSSSSGSPSP 126 +SRSS S SS T T S G S S + SRS T + S S S Sbjct: 1738 KSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQST 1797 Query: 127 SRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGK 186 SRRR R RSRS+ +R RSP+ + + R R + + Sbjct: 1798 SRRRQ--RSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRG--RSRTPPTSRKRSR 1853 Query: 187 IKMIDMPVERMHPHLSKG-YAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLAPWPRP 245 + P +R S + P + + + + + T+V R Sbjct: 1854 SRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRS 1913 Query: 246 PPRRFSPPRRMLPPPPMWRR----SPPRMRRRSRSPRRRSPV-RRRSRS----PGRRRHR 296 S R PP+ RR P RRRSRS R PV RRRSRS RRR R Sbjct: 1914 RASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRS--RTPPVTRRRSRSRTPPVTRRRSR 1971 Query: 297 SRSSSNSSR 305 SR+S + R Sbjct: 1972 SRTSPITRR 1980 Score = 57.0 bits (136), Expect = 2e-08 Identities = 77/296 (26%), Positives = 107/296 (36%), Gaps = 67/296 (22%) Query: 27 SPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSG 86 SPT+ DRS KS ++ +++ S + +R S+ + S S Sbjct: 398 SPTR--DRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISS 455 Query: 87 SSTSTGSSSG-----SSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRR-----R 136 S TS S G S S SR S S +++ S S +P++R H R R Sbjct: 456 SPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRR 515 Query: 137 SRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVER 196 SRS + + +R+ RS SP+ Sbjct: 516 SRSAQRWGRSRSPQRRGRSRSPQ------------------------------------- 538 Query: 197 MHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLAPWPRPPPRRFSPPRRM 256 P S+ A + H G+ + T P R R +P RR Sbjct: 539 -RPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRT----PARRGRSRSRTPARRR 593 Query: 257 LPPPPMWRRSPPRMRRRSRSP------RRRSPVRRRS--RSPGRRRHRSRSSSNSS 304 R+P R R RSR+P R R+P RRRS RSP RRR RSRS + S Sbjct: 594 -----SRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRS 644 Score = 55.1 bits (131), Expect = 8e-08 Identities = 80/298 (26%), Positives = 118/298 (39%), Gaps = 29/298 (9%) Query: 15 KENNKKSSTRAPSPTK--RKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGS 72 + ++ +SS +P PTK R S +S + G+ +E S ++++ R Sbjct: 414 QSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSH 473 Query: 73 SSTRSRSSSTSSSGSSTSTGSS-SGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRH 131 S T SR S S ++ G S S + + SRS S RS S+ S SP RR Sbjct: 474 SHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRG- 532 Query: 132 DNRRRSRSKSKP--PKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKM 189 RSRS +P + +R+ RS S + + H +R+ +T G+ + Sbjct: 533 ----RSRSPQRPGWSRSRNTQRRGRSRSARRGRSH----SRSP---------ATRGRSRS 575 Query: 190 IDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLAPWPRPPPRR 249 P R S+ A + + + + A R P RR Sbjct: 576 -RTPARRGRSR-SRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRR 633 Query: 250 FSPPRRMLPPPPMWRRSPP--RMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSSSNSSR 305 S R R P R R RSR+P RR R RSR+P RR RSRS + + R Sbjct: 634 RSRSRSPARRSGRSRSRTPARRGRSRSRTPARRG--RSRSRTPARRSGRSRSRTPARR 689 Score = 54.7 bits (130), Expect = 1e-07 Identities = 51/171 (29%), Positives = 68/171 (39%), Gaps = 35/171 (20%) Query: 15 KENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSS 74 KE ++ P+P KRK RS S S ++ SS S+SS SSS Sbjct: 2587 KEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSS---------SSSSSSSS 2637 Query: 75 TRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRS------SSSSSSSGSPSPSR 128 + S SSS+SSS S G + +S SRS S S S S SP Sbjct: 2638 SSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVE 2697 Query: 129 RR-----------------HDNRRRSRSKSKPPKRDEKERKRRSPSPKPTK 162 RR +RR R S+ P +R+R +PSP+P + Sbjct: 2698 RRRPSPQPSPRDQQSSSSERGSRRGQRGDSRSPSH---KRRRETPSPRPMR 2745 Score = 54.3 bits (129), Expect = 1e-07 Identities = 77/312 (24%), Positives = 109/312 (34%), Gaps = 34/312 (10%) Query: 19 KKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGR--DKTRKRRSASSGSSSTR 76 +++ AP P K E S RS K+ +KDRGR + + RR S + Sbjct: 158 REAKQPAPEPPKPYSLVRESSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKK 217 Query: 77 SRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRR 136 RS S S S S S R S ST+ + S + S S + R Sbjct: 218 HRSESESKKRKHRSPTPKS-KRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSR 276 Query: 137 SRSKSKPPKRDEKERKRRSPSPKPTKVHIGRL------TRNVTKDHIMEIFSTYGKIKMI 190 SRS+S K RSPSP + G T + + E + Sbjct: 277 SRSRSAAAKTHTTALAGRSPSPASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYE 336 Query: 191 DMPVERMHPHLSKGYAYVEFEN----PDEAEKALKHMDGGQIDGQEITATAVLAPWPRPP 246 D ++ ++ E + P L GG + AT L+ P P Sbjct: 337 DKDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGG---SPQPLATTPLSQEPVNP 393 Query: 247 PRRFSPPRRMLPPPPMWRRSPPRMRRRSR------SPRRRSPVRRRSRSPGRRR------ 294 P SP R PP +SP ++ + S SP+ R S SP + Sbjct: 394 PSEASPTRDRSPP-----KSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPG 448 Query: 295 -HRSRSSSNSSR 305 HR SSS +S+ Sbjct: 449 SHREISSSPTSK 460 Score = 51.6 bits (122), Expect = 9e-07 Identities = 86/310 (27%), Positives = 118/310 (38%), Gaps = 62/310 (20%) Query: 20 KSSTRAPSPTKRKDRSDEKSK-DRSKDKGATKESSEKDRGRDKTRKR---RSASSGSSST 75 KS + PS + RS +K RS+ + TK + R R R R S S Sbjct: 471 KSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQR 530 Query: 76 RSRSSSTSSSGSSTSTGSSS-GSSSSSASSRSGSSST-------SRSSSSSSSSGSPSPS 127 R RS S G S S + G S S+ RS S S SR+ + S S +P+ Sbjct: 531 RGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPA 590 Query: 128 RRRHDNRR--RSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYG 185 RRR +R R RS+S+ P R + R R+P+ + ++ TR+ Sbjct: 591 RRRSRSRTPTRRRSRSRTPARRGRSRS-RTPARRRSR------TRS-------------- 629 Query: 186 KIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLAPWPRP 245 PV R S + A + G+ + T Sbjct: 630 -------PVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRT--------- 673 Query: 246 PPRRFSPPRRMLPPPPMWR---RSPPRMRRRSRSPRR------RSPVRR-RSRSPGRRRH 295 P R S R P R R+P R R RSRS R R+P RR RS S R++ Sbjct: 674 -PARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKN 732 Query: 296 RSRSSSNSSR 305 +SR+S SR Sbjct: 733 KSRTSQRRSR 742 Score = 51.6 bits (122), Expect = 9e-07 Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 11/144 (7%) Query: 19 KKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSR 78 K+S +RA T R+ RS R + + T S + R R +T R S +S SR Sbjct: 1862 KRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRR-RSRSRTSVTRRRSRSRASPVSR 1920 Query: 79 SSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNR---- 134 S S + T S S + ++ SRS + +R S S + P +RRR +R Sbjct: 1921 RRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRT---PPVTRRRSRSRTSPI 1977 Query: 135 --RRSRSKSKPPKRDEKERKRRSP 156 RRSRS++ P R + R R SP Sbjct: 1978 TRRRSRSRTSPVTR-RRSRSRTSP 2000 Score = 51.6 bits (122), Expect = 9e-07 Identities = 46/152 (30%), Positives = 66/152 (43%), Gaps = 13/152 (8%) Query: 18 NKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKE-SSEKDRGRDKTRKRRSASSGSSSTR 76 +++ S S T+R+ RS R + + T + + R R T +RRS S TR Sbjct: 1896 SRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTR 1955 Query: 77 SRSSS--------TSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSR 128 RS S S S +S T S S +S + R S TS + S S + +R Sbjct: 1956 RRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTR 2015 Query: 129 RRHDNRR----RSRSKSKPPKRDEKERKRRSP 156 RR +R R RS+S+ P K + RSP Sbjct: 2016 RRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSP 2047 Score = 51.6 bits (122), Expect = 9e-07 Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 13/163 (7%) Query: 7 KKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDK-TRKR 65 +++S ++S +RA ++R+ RS R + + T + + R R +R Sbjct: 1897 RRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRR 1956 Query: 66 RSASSGSSSTRSRSSSTSS--------SGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSS 117 RS S TR RS S +S S +S T S S +S + R S TS + Sbjct: 1957 RSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRR 2016 Query: 118 SSSSGSPSPSRRRHDNRR----RSRSKSKPPKRDEKERKRRSP 156 S S +P RRR +R R RS+S+ P + + R+P Sbjct: 2017 RSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTP 2059 Score = 47.8 bits (112), Expect = 1e-05 Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 15/154 (9%) Query: 18 NKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGR-DKTRKRRSASSGSSSTR 76 +++S +R P ++R+ RS R + + T + + R R +RRS S TR Sbjct: 1873 HRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTR 1932 Query: 77 SRSSST-------SSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRR 129 RS S S S + T S S + + R S TS + S S + +RR Sbjct: 1933 RRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRR 1992 Query: 130 RHDNR------RRSRSKSKPPKRDEKERKRRSPS 157 R +R RRSRS++ P R + R R P+ Sbjct: 1993 RSRSRTSPVTRRRSRSRTSPVTR-RRSRSRTPPA 2025 Score = 47.0 bits (110), Expect = 2e-05 Identities = 48/164 (29%), Positives = 69/164 (42%), Gaps = 27/164 (16%) Query: 17 NNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTR 76 + +K+ +R R + S E K R + + SS + + + + RRS S S + Sbjct: 728 SERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPK 787 Query: 77 SRSSST---SSSGSSTSTGSSS-----GSSSSSASSRSGSSSTSRSSSSSSS------SG 122 +S + S SGSS S SSSS + S + SR S SSSS SG Sbjct: 788 QKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSG 847 Query: 123 SP-------SPSRRRHD--NRRRSRSKSKPPKRDEKERKRRSPS 157 +P SP +RRS +S P + E K R+PS Sbjct: 848 TPPRQGSITSPQANEQSVTPQRRSCFESSP----DPELKSRTPS 887 Score = 42.4 bits (98), Expect = 5e-04 Identities = 82/344 (23%), Positives = 120/344 (34%), Gaps = 73/344 (21%) Query: 19 KKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKT----RKRRSASSGSSS 74 K+ STR+ + S E S D + G + S D + RS+S+ S Sbjct: 1372 KEQSTRSSGHS-----SSELSPDAVEKAGMSSNQSISSPVLDAVPRTPSRERSSSASSPE 1426 Query: 75 TRSRSSSTSS--SGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSG------SPSP 126 + T S S S +S G GS + S S SGSS + + S G SP P Sbjct: 1427 MKDGLPRTPSRRSRSGSSPGLRDGSGTPSRHSLSGSSPGMKDIPRTPSRGRSECDSSPEP 1486 Query: 127 SRRRHDNRRRSRSKSKP--------PKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHI- 177 R RSRS S P P+R+ + + +G+ +R+ + + Sbjct: 1487 KALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRSRSGSSQELD 1546 Query: 178 --------------------------MEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEF- 210 + S G +D R+ P S+ + E Sbjct: 1547 VKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSK-SRLSPRRSRSGSSPEVK 1605 Query: 211 ENPDEAEKALKHMDGGQIDGQEITATAVLAPWPRPPPR--RFSPPRRMLPPPPMWRRS-- 266 + P A +A D ++ AP PR PR R + P P S Sbjct: 1606 DKPRAAPRAQSGSD---------SSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTE 1656 Query: 267 -----PPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSSSNSSR 305 PP+ R R R + +SR+P RRR SRSS +R Sbjct: 1657 SSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRR-SSRSSPELTR 1699 Score = 41.2 bits (95), Expect = 0.001 Identities = 72/312 (23%), Positives = 101/312 (32%), Gaps = 39/312 (12%) Query: 25 APSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSST-- 82 A + T + +EK +R + +S D R+ R A + S Sbjct: 117 AVTETHQLAELNEKKNERLRAAFGISDSYVDGSSFDPQRRAREAKQPAPEPPKPYSLVRE 176 Query: 83 SSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSG---SPSPSRRRHDNRRRSRS 139 SSS S + RS SSS R SS S S S++R R Sbjct: 177 SSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESESKKR--KHRSPTP 234 Query: 140 KSKPPKRDEKERKRRS--PSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERM 197 KSK +D+K ++ RS P+PK + H + + S K + Sbjct: 235 KSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGR 294 Query: 198 HPHLSKGY-----------AYVEFENPDEAEKALKH----MDGGQIDGQEITATAVLAPW 242 P + G + P E A K + D +E +AT Sbjct: 295 SPSPASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATR----- 349 Query: 243 PRPPPRRFSP-PRRMLPPPPMWRR---------SPPRMRRRSRSPRRRSPVRRRSRSPGR 292 P P P R S P P P + R + P + P SP R RS Sbjct: 350 PSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSP 409 Query: 293 RRHRSRSSSNSS 304 + SSS SS Sbjct: 410 EKLPQSSSSESS 421 Score = 40.4 bits (93), Expect = 0.002 Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 5/115 (4%) Query: 19 KKSSTRAPSPTKRKDRSDE----KSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSS 74 ++S +R P +R+ RS + + RS+ A + S + R R +RS + + Sbjct: 2016 RRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRS-RSRTPRTARGKRSLTRSPPA 2074 Query: 75 TRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRR 129 R RS+S SSS S S + + S + + + ++SR S S S SP+P R Sbjct: 2075 IRRRSASGSSSDRSRSATPPATRNHSGSRTPPVALNSSRMSCFSRPSMSPTPLDR 2129 Score = 39.3 bits (90), Expect = 0.004 Identities = 66/273 (24%), Positives = 99/273 (36%), Gaps = 33/273 (12%) Query: 19 KKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKT-----RKRRSASSGSS 73 ++S +R T+R+ RS R + + T + + R R +T R+ RS + Sbjct: 1980 RRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRR-RSRSRTPPAIRRRSRSRTPLLP 2038 Query: 74 STRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPS---PSRRR 130 RSRS S + + + + + + +RS + RS+S SSS S S P+ R Sbjct: 2039 RKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPAIRRRSASGSSSDRSRSATPPATRN 2098 Query: 131 HDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMI 190 H R + R SP+P G L + M + G M+ Sbjct: 2099 HSGSRTPPVALNSSRMSCFSRPSMSPTPLDRCRSPGMLEPLGSSRTPMSVLQQAGG-SMM 2157 Query: 191 DMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLAPWPRPPPRRF 250 D P R+ H EN ++ AL TA+ RPPP Sbjct: 2158 DGPGPRIPDHQRTSVP----ENHAQSRIAL-------------ALTAISLGTARPPPSMS 2200 Query: 251 SP--PRRM----LPPPPMWRRSPPRMRRRSRSP 277 + RM P P M R+ P SR P Sbjct: 2201 AAGLAARMSQVPAPVPLMSLRTAPAANLASRIP 2233 Score = 35.4 bits (80), Expect = 0.063 Identities = 32/104 (30%), Positives = 42/104 (40%), Gaps = 3/104 (2%) Query: 47 GATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRS 106 G + E E G + S +RSS SSS S +G SS+ + S Sbjct: 1346 GFSSEVKEDLNGPFLNQLETDPSLDMKEQSTRSSGHSSSELSPDAVEKAGMSSNQSISSP 1405 Query: 107 GSSSTSRSSSSSSSSGSPSPSRRRHDNR---RRSRSKSKPPKRD 147 + R+ S SS + SP + R RRSRS S P RD Sbjct: 1406 VLDAVPRTPSRERSSSASSPEMKDGLPRTPSRRSRSGSSPGLRD 1449 Score = 34.3 bits (77), Expect = 0.14 Identities = 44/156 (28%), Positives = 64/156 (41%), Gaps = 14/156 (8%) Query: 20 KSSTRAPSPTKR---KDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSS--- 73 +++ ++ +P +R + D + K R+ + + SS R + T R+S S SS Sbjct: 859 QANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSGSSPP-RVKSSTPPRQSPSRSSSPQP 917 Query: 74 ------STRSRSSSTSSSGS-STSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSP 126 S R RS S SSS S S T ++ S S S S S S S S SP Sbjct: 918 KVKAIISPRQRSHSGSSSPSPSRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDT 977 Query: 127 SRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTK 162 + R+S S S P K + PS +K Sbjct: 978 KVKPETPPRQSHSGSISPYPKVKAQTPPGPSLSGSK 1013 Score = 33.9 bits (76), Expect = 0.18 Identities = 34/130 (26%), Positives = 46/130 (35%), Gaps = 1/130 (0%) Query: 21 SSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSS 80 S R S T + S + K K G R +S ++ RSRS Sbjct: 895 SPPRVKSSTPPRQSPSRSSSPQPKVKAIISPRQRSHSGSSSPSPSR-VTSRTTPRRSRSV 953 Query: 81 STSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSK 140 S S+ S S S SSS ++ + R S S S S P + S SK Sbjct: 954 SPCSNVESRLLPRYSHSGSSSPDTKVKPETPPRQSHSGSISPYPKVKAQTPPGPSLSGSK 1013 Query: 141 SKPPKRDEKE 150 S P+ K+ Sbjct: 1014 SPCPQEKSKD 1023 >gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] Length = 330 Score = 75.9 bits (185), Expect = 4e-14 Identities = 61/160 (38%), Positives = 80/160 (50%), Gaps = 16/160 (10%) Query: 15 KENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSS 74 KE+ + +K K DE D K S E+D + K+ +R + S SS Sbjct: 151 KESEGEEEDEDEDLSKYKLDEDEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSH 210 Query: 75 TRSRSSSTSSSGSSTSTGSSSGSSSSSAS-SRSGSSSTSRS------SSSSSSSGSPSPS 127 +RS S S+S S S + + S S SSSSS S SRS S SRS SSS S GS SP Sbjct: 211 SRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSSRSHRGSSSPR 270 Query: 128 RRRHD--------NRRRSRSKSKPPKRDEKERKRRSPSPK 159 +R + NR+RSRS+S D K+R+ RS SP+ Sbjct: 271 KRSYSSSSSSPERNRKRSRSRSS-SSGDRKKRRTRSRSPE 309 Score = 65.5 bits (158), Expect = 6e-11 Identities = 45/125 (36%), Positives = 67/125 (53%), Gaps = 10/125 (8%) Query: 15 KENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASS---G 71 + ++ +SS+R+ SP+ + RS +S+ S + ++ SS ++R R + K RS+S G Sbjct: 207 RSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSS-RERSRSRGSKSRSSSRSHRG 265 Query: 72 SSSTRSRSSSTSSSG------SSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPS 125 SSS R RS S+SSS S S SSSG + RSSS SS SGS S Sbjct: 266 SSSPRKRSYSSSSSSPERNRKRSRSRSSSSGDRKKRRTRSRSPERRHRSSSGSSHSGSRS 325 Query: 126 PSRRR 130 S+++ Sbjct: 326 SSKKK 330 Score = 43.1 bits (100), Expect = 3e-04 Identities = 45/155 (29%), Positives = 63/155 (40%), Gaps = 28/155 (18%) Query: 19 KKSSTRAPSPT---KRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSST 75 KK +A P K + + + ++ +D+ +K ++D D Sbjct: 132 KKYRGKAVGPASILKEVEDKESEGEEEDEDEDLSKYKLDEDEDED--------------- 176 Query: 76 RSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGS-SSTSRSSSSSSSSGSPSPSRRRHDNR 134 + S S S S+ SRS S SS SRSSS SS SPS SR R +R Sbjct: 177 ---DADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSS---SPSSSRSRSRSR 230 Query: 135 RRSRSKSKPPKRD---EKERKRRSPSPKPTKVHIG 166 RS S S+ R E+ R R S S ++ H G Sbjct: 231 SRSSSSSQSRSRSSSRERSRSRGSKSRSSSRSHRG 265 Score = 34.3 bits (77), Expect = 0.14 Identities = 20/41 (48%), Positives = 24/41 (58%) Query: 264 RRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSSSNSS 304 ++S R R +SRS RS R S S R R RSRS S+SS Sbjct: 196 KKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSS 236 Score = 33.5 bits (75), Expect = 0.24 Identities = 23/43 (53%), Positives = 25/43 (58%), Gaps = 5/43 (11%) Query: 266 SPPRMRRRSRSPRR----RSPVRRRSRSPGRRRHRSRSSSNSS 304 SP R R+RSRS R R RSRSP RRHRS S S+ S Sbjct: 280 SPERNRKRSRSRSSSSGDRKKRRTRSRSP-ERRHRSSSGSSHS 321 Score = 32.3 bits (72), Expect = 0.54 Identities = 22/43 (51%), Positives = 25/43 (58%), Gaps = 3/43 (6%) Query: 265 RSPPRMRRRSRSPRRRSPVRRRSRSP--GRRRHRSRSSSNSSR 305 RS R R S SPR+RS S SP R+R RSRSSS+ R Sbjct: 257 RSSSRSHRGSSSPRKRS-YSSSSSSPERNRKRSRSRSSSSGDR 298 Score = 31.2 bits (69), Expect = 1.2 Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Query: 266 SPPRMRRRSRS-PRRRSPVRRRSRSPGRRRHRSRSSSNSS 304 SP R RSRS R S + RSRS R R RSR S + S Sbjct: 219 SPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRS 258 Score = 29.3 bits (64), Expect = 4.5 Identities = 24/55 (43%), Positives = 26/55 (47%), Gaps = 16/55 (29%) Query: 265 RSPPRMRRRSR---------------SPRRRSPVRRRSRSPGRRRHRSRSSSNSS 304 RS R R RSR SPR+RS S SP R R RSRS S+SS Sbjct: 242 RSSSRERSRSRGSKSRSSSRSHRGSSSPRKRS-YSSSSSSPERNRKRSRSRSSSS 295 Score = 28.5 bits (62), Expect = 7.7 Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Query: 264 RRSPPRMRRRSRSPRR-RSPVRRRSRSPGRRRHRSRSSS 301 R S R RS SP RS R RSRS + RSRSSS Sbjct: 207 RSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSS 245 >gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens] Length = 320 Score = 75.9 bits (185), Expect = 4e-14 Identities = 61/160 (38%), Positives = 80/160 (50%), Gaps = 16/160 (10%) Query: 15 KENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSS 74 KE+ + +K K DE D K S E+D + K+ +R + S SS Sbjct: 151 KESEGEEEDEDEDLSKYKLDEDEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSH 210 Query: 75 TRSRSSSTSSSGSSTSTGSSSGSSSSSAS-SRSGSSSTSRS------SSSSSSSGSPSPS 127 +RS S S+S S S + + S S SSSSS S SRS S SRS SSS S GS SP Sbjct: 211 SRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSSRSHRGSSSPR 270 Query: 128 RRRHD--------NRRRSRSKSKPPKRDEKERKRRSPSPK 159 +R + NR+RSRS+S D K+R+ RS SP+ Sbjct: 271 KRSYSSSSSSPERNRKRSRSRSS-SSGDRKKRRTRSRSPE 309 Score = 55.8 bits (133), Expect = 5e-08 Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 5/106 (4%) Query: 15 KENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASS---G 71 + ++ +SS+R+ SP+ + RS +S+ S + ++ SS ++R R + K RS+S G Sbjct: 207 RSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSS-RERSRSRGSKSRSSSRSHRG 265 Query: 72 SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSS 117 SSS R RS S+SSS S S S SSS+ R + SRS S Sbjct: 266 SSSPRKRSYSSSSS-SPERNRKRSRSRSSSSGDRKKRRTRSRSPES 310 Score = 43.1 bits (100), Expect = 3e-04 Identities = 45/155 (29%), Positives = 63/155 (40%), Gaps = 28/155 (18%) Query: 19 KKSSTRAPSPT---KRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSST 75 KK +A P K + + + ++ +D+ +K ++D D Sbjct: 132 KKYRGKAVGPASILKEVEDKESEGEEEDEDEDLSKYKLDEDEDED--------------- 176 Query: 76 RSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGS-SSTSRSSSSSSSSGSPSPSRRRHDNR 134 + S S S S+ SRS S SS SRSSS SS SPS SR R +R Sbjct: 177 ---DADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSS---SPSSSRSRSRSR 230 Query: 135 RRSRSKSKPPKRD---EKERKRRSPSPKPTKVHIG 166 RS S S+ R E+ R R S S ++ H G Sbjct: 231 SRSSSSSQSRSRSSSRERSRSRGSKSRSSSRSHRG 265 Score = 34.3 bits (77), Expect = 0.14 Identities = 20/41 (48%), Positives = 24/41 (58%) Query: 264 RRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSSSNSS 304 ++S R R +SRS RS R S S R R RSRS S+SS Sbjct: 196 KKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSS 236 Score = 32.3 bits (72), Expect = 0.54 Identities = 22/43 (51%), Positives = 25/43 (58%), Gaps = 3/43 (6%) Query: 265 RSPPRMRRRSRSPRRRSPVRRRSRSP--GRRRHRSRSSSNSSR 305 RS R R S SPR+RS S SP R+R RSRSSS+ R Sbjct: 257 RSSSRSHRGSSSPRKRS-YSSSSSSPERNRKRSRSRSSSSGDR 298 Score = 31.2 bits (69), Expect = 1.2 Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Query: 266 SPPRMRRRSRS-PRRRSPVRRRSRSPGRRRHRSRSSSNSS 304 SP R RSRS R S + RSRS R R RSR S + S Sbjct: 219 SPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRS 258 Score = 29.3 bits (64), Expect = 4.5 Identities = 24/55 (43%), Positives = 26/55 (47%), Gaps = 16/55 (29%) Query: 265 RSPPRMRRRSR---------------SPRRRSPVRRRSRSPGRRRHRSRSSSNSS 304 RS R R RSR SPR+RS S SP R R RSRS S+SS Sbjct: 242 RSSSRERSRSRGSKSRSSSRSHRGSSSPRKRS-YSSSSSSPERNRKRSRSRSSSS 295 Score = 28.5 bits (62), Expect = 7.7 Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Query: 264 RRSPPRMRRRSRSPRR-RSPVRRRSRSPGRRRHRSRSSS 301 R S R RS SP RS R RSRS + RSRSSS Sbjct: 207 RSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSS 245 >gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] Length = 494 Score = 75.5 bits (184), Expect = 6e-14 Identities = 81/297 (27%), Positives = 114/297 (38%), Gaps = 35/297 (11%) Query: 7 KKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRR 66 K +S + +KK +R+PS K + RS K RSK K +E + + K K R Sbjct: 231 KSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKP-KSR 289 Query: 67 SASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSP 126 S S S ++SRS S GS S S S R S + S S S S S Sbjct: 290 SPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSK 349 Query: 127 SRRRHDNRRRSR--SKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTY 184 S+ + R+RSR S+S+ R + ER R+ S + +K + + D + Sbjct: 350 SKDKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDR------SQ 403 Query: 185 GKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLAPWPR 244 + + ER H + Q +G+ + A R Sbjct: 404 SRSPSRSVSKEREH----------------------AKSESSQREGRGESENAGTNQETR 441 Query: 245 PPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSSS 301 R S + LP RS + RSRS +S R SRSP R R RS S S Sbjct: 442 SRSRSNSKSKPNLPSESR-SRSKSASKTRSRS---KSRSRSASRSPSRSRSRSHSRS 494 Score = 62.0 bits (149), Expect = 6e-10 Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 4/140 (2%) Query: 13 GVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKR-RSASSG 71 G + S +R+ S ++ + R KS+ RS G++K S K R R ++ R RS S Sbjct: 178 GSRRRRSYSRSRSHSRSRSRSRHSRKSRSRS---GSSKSSHSKSRSRSRSGSRSRSKSRS 234 Query: 72 SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRH 131 S +RSRS S S S S+ + S+S + + ++ + S S RH Sbjct: 235 RSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRH 294 Query: 132 DNRRRSRSKSKPPKRDEKER 151 ++ +SRS+S+ + +E++R Sbjct: 295 KSKSKSRSRSQERRVEEEKR 314 Score = 61.2 bits (147), Expect = 1e-09 Identities = 42/98 (42%), Positives = 54/98 (55%), Gaps = 7/98 (7%) Query: 62 TRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSAS-SRSGSSSTSRSSSSSSS 120 +R+RRS S S +RSRS S S S + +GSS S S S S SRSGS S S+S S S S Sbjct: 179 SRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQS 238 Query: 121 SG------SPSPSRRRHDNRRRSRSKSKPPKRDEKERK 152 S SPS+ + +R S KS+ +D+ E K Sbjct: 239 RSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEK 276 Score = 58.5 bits (140), Expect = 7e-09 Identities = 49/128 (38%), Positives = 64/128 (50%), Gaps = 13/128 (10%) Query: 44 KDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSAS 103 +DK ++ R R +R R S S S +RSRS S+ SS S + + S SGS S S Sbjct: 174 EDKPGSRRRRSYSRSRSHSRSR-SRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRS-- 230 Query: 104 SRSGSSSTSRSSSSSSSSGSPS--PSRRRHDNRRRSRSKSKPPKRDEKER-------KRR 154 +S S S SRS S S SPS SR R + +SRSKSK ++ + K R Sbjct: 231 -KSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSR 289 Query: 155 SPSPKPTK 162 SPS +K Sbjct: 290 SPSRHKSK 297 Score = 52.0 bits (123), Expect = 7e-07 Identities = 62/218 (28%), Positives = 88/218 (40%), Gaps = 35/218 (16%) Query: 100 SSASSRSGSSSTSRS---------SSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRD-EK 149 S + SRS S S SRS S SS SS S S SR R +R RS+S+S+ R K Sbjct: 184 SYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSRSRSK 243 Query: 150 ERKRRSPSPKP--TKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAY 207 + K RSPS + ++ H +R+ +KD E + H SK + Sbjct: 244 KEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSKSRSR 303 Query: 208 VEFENPDEAEKALKHMDGGQIDGQEITATAVLAPWPRPPPRRFSPPRRMLPPPPMWRRSP 267 + +E ++ G + ++ R + S RS Sbjct: 304 SQERRVEEEKR-------GSVSRGRSQEKSLRQSRSRSRSKGGS-------------RSR 343 Query: 268 PRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSSSNSSR 305 R R +S+ R+ R+RSR R R RSRS S SR Sbjct: 344 SRSRSKSKDKRKG---RKRSREESRSRSRSRSKSERSR 378 Score = 52.0 bits (123), Expect = 7e-07 Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 10/115 (8%) Query: 4 SGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTR 63 S KKK KE+ +S +R+PS + K+R KS+ ++ E++ G ++ Sbjct: 390 SSKKKK-----KEDTDRSQSRSPSRSVSKEREHAKSESSQREGRGESENA----GTNQET 440 Query: 64 KRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSS 118 + RS S+ S S S S S S++ T S S S S SAS RS S S SRS S S Sbjct: 441 RSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSAS-RSPSRSRSRSHSRS 494 Score = 43.5 bits (101), Expect = 2e-04 Identities = 47/185 (25%), Positives = 73/185 (39%), Gaps = 26/185 (14%) Query: 122 GSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIF 181 GS R + RR R K PP R E ++ + L+ + + + Sbjct: 77 GSYGSGRSGYGYRRSGRDKYGPPTRTEY------------RLIVENLSSRCSWQDLKDYM 124 Query: 182 STYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLAP 241 G++ D R K +EF + + ++AL+ +DG +++G++I Sbjct: 125 RQAGEVTYADAHKGR------KNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVE---- 174 Query: 242 WPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSP---VRRRSRSPGRRRHRSR 298 +P RR R RS + RSRS +S R RSRS R R +SR Sbjct: 175 -DKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSR 233 Query: 299 SSSNS 303 S S S Sbjct: 234 SRSQS 238 Score = 41.6 bits (96), Expect = 9e-04 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 9/80 (11%) Query: 162 KVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALK 221 +V+IGRL+ + + F YGKI +D L GY +VEF++ +A+ A+ Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVD---------LKNGYGFVEFDDLRDADDAVY 53 Query: 222 HMDGGQIDGQEITATAVLAP 241 ++G + G+ + P Sbjct: 54 ELNGKDLCGERVIVEHARGP 73 Score = 40.4 bits (93), Expect = 0.002 Identities = 57/199 (28%), Positives = 77/199 (38%), Gaps = 32/199 (16%) Query: 110 STSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLT 169 S R S S S S S S SR RH + RSRS S + + RS S +K + Sbjct: 179 SRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQS 238 Query: 170 RNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQID 229 R+ +K K + R H S G + ++ D+AE+ +++ D Sbjct: 239 RSRSKKE---------KSRSPSKEKSRSRSH-SAGKS--RSKSKDQAEEKIQNNDN---- 282 Query: 230 GQEITATAVLAPWPRPPPRRFSPPRRMLPPPPM-----WRRSPPRMRRRSRSPRRRSPVR 284 V P R P R S + R S R R + +S R+ R Sbjct: 283 --------VGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQS---R 331 Query: 285 RRSRSPGRRRHRSRSSSNS 303 RSRS G R RSRS S S Sbjct: 332 SRSRSKGGSRSRSRSRSKS 350 >gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] Length = 2968 Score = 74.3 bits (181), Expect = 1e-13 Identities = 47/103 (45%), Positives = 62/103 (60%) Query: 21 SSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSS 80 SS+ + S + + E+ D++ D G + S+SS SSS+ S SS Sbjct: 2568 SSSSSSSSSSGSETEGEEEGDKNGDGGCGTGGRNCSAASSRAASPASSSSSSSSSSSSSS 2627 Query: 81 STSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGS 123 S+SSS SS+S+ SSS SSSSS+SS S SSS+S SSSSSSSS S Sbjct: 2628 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2670 Score = 73.6 bits (179), Expect = 2e-13 Identities = 52/135 (38%), Positives = 70/135 (51%), Gaps = 3/135 (2%) Query: 13 GVKENNKKSSTRAPSPTKRKDRSDEKSKDRSK---DKGATKESSEKDRGRDKTRKRRSAS 69 G +E+ SS+ + S + S S+ + DK R R ++ Sbjct: 2553 GAEESESSSSSSSGSSSSSSSSSSSGSETEGEEEGDKNGDGGCGTGGRNCSAASSRAASP 2612 Query: 70 SGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRR 129 + SSS+ S SSS+SSS SS+S+ SSS SSSSS+SS S SSS+S SSSSSSSS S S S Sbjct: 2613 ASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSST 2672 Query: 130 RHDNRRRSRSKSKPP 144 ++ S P Sbjct: 2673 TDEDSSCSSDDEAAP 2687 Score = 67.0 bits (162), Expect = 2e-11 Identities = 49/136 (36%), Positives = 64/136 (47%), Gaps = 5/136 (3%) Query: 18 NKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRS 77 N KS +A + + S+ S S ++ SS + + G T Sbjct: 2540 NPKSPDKAQAEQDGAEESESSSSSSSGSSSSSSSSSSSGSETEGEEEGDKNGDGGCGTGG 2599 Query: 78 RSSSTSSS-----GSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHD 132 R+ S +SS SS+S+ SSS SSSSS+SS S SSS+S SSSSSSSS S S S Sbjct: 2600 RNCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2659 Query: 133 NRRRSRSKSKPPKRDE 148 + S S S DE Sbjct: 2660 SSSSSSSSSSSSTTDE 2675 Score = 62.8 bits (151), Expect = 4e-10 Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 19/150 (12%) Query: 17 NNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTR 76 N +S+RA SP S S S ++ SS +SS SSS+ Sbjct: 2601 NCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSS--------------SSSSSSSSS 2646 Query: 77 SRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRR 136 S SSS+SSS SS+S+ SSS SSSSS + S S+ ++ + ++G PS + Sbjct: 2647 SSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPAPTAG-PSAQAALPTKATK 2705 Query: 137 SRSKSKP----PKRDEKERKRRSPSPKPTK 162 K++P P + + ++P P+PT+ Sbjct: 2706 QAGKARPSAHSPGKKTPAPQPQAPPPQPTQ 2735 Score = 60.5 bits (145), Expect = 2e-09 Identities = 55/160 (34%), Positives = 69/160 (43%), Gaps = 43/160 (26%) Query: 40 KDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSS--------------- 84 +D K K +E+D G +++ S+SSGSSS SSS+SS Sbjct: 2536 EDSGNPKSPDKAQAEQD-GAEESESSSSSSSGSSS----SSSSSSSSGSETEGEEEGDKN 2590 Query: 85 -----------------------SGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSS 121 S SS+S+ SSS SSSSS+SS S SSS+S SSSSSSSS Sbjct: 2591 GDGGCGTGGRNCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2650 Query: 122 GSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPT 161 S S S + S S S D +P PT Sbjct: 2651 SSSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPAPT 2690 Score = 35.0 bits (79), Expect = 0.083 Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 3/62 (4%) Query: 71 GSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRR 130 G T S + S + + + S SS+SS SGSSS SSSSSSSSGS + Sbjct: 2530 GPGLTFEDSGNPKSPDKAQAEQDGAEESESSSSSSSGSSS---SSSSSSSSGSETEGEEE 2586 Query: 131 HD 132 D Sbjct: 2587 GD 2588 Score = 34.3 bits (77), Expect = 0.14 Identities = 46/198 (23%), Positives = 74/198 (37%), Gaps = 36/198 (18%) Query: 81 STSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSK 140 S + S + G SSG+ + +SSR G + + G P P + D R R Sbjct: 178 SHAPSARTPGGGHSSGAPAKGSSSRDGPAK-----ERAGRGGEPPPLFGKKDPRARGEEA 232 Query: 141 SKP-------PKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIME---IFSTYGKIKMI 190 S P + + R+ R P P+ + L + TK+ ++ + G + Sbjct: 233 SGPRGVVDLTQEARAEGRQDRGP-PRLAERLSPFLAESKTKNAALQPSVLTMCNGGAGDV 291 Query: 191 DMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLAPWPRPPPRRF 250 +P A V A++A + +G ++ + T L P PRP P Sbjct: 292 GLP------------ALVAEAGRGGAKEAARQDEGARL----LRRTETLLPGPRPCPSPL 335 Query: 251 SPPRRMLPPPPMWRRSPP 268 PP P PP +PP Sbjct: 336 PPP----PAPPKGPPAPP 349 Score = 34.3 bits (77), Expect = 0.14 Identities = 18/42 (42%), Positives = 24/42 (57%) Query: 248 RRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRS 289 RR S RR P + RR P R R+R+ +P SP R+R +S Sbjct: 1507 RRDSEDRREEPHRSLARRGPGRPRKRTHAPSALSPPRKRGKS 1548 Score = 32.7 bits (73), Expect = 0.41 Identities = 35/151 (23%), Positives = 52/151 (34%), Gaps = 36/151 (23%) Query: 43 SKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSA 102 S+ K ++++ D ++ SG+ + ++ + + + SSS S SSS+ Sbjct: 2511 SEPKAPWPKATDGDLAQEPGPGLTFEDSGNPKSPDKAQAEQDGAEESESSSSSSSGSSSS 2570 Query: 103 SSRSGSS------------------------------------STSRSSSSSSSSGSPSP 126 SS S SS S+S SSSSSSSS S S Sbjct: 2571 SSSSSSSGSETEGEEEGDKNGDGGCGTGGRNCSAASSRAASPASSSSSSSSSSSSSSSSS 2630 Query: 127 SRRRHDNRRRSRSKSKPPKRDEKERKRRSPS 157 S + S S S S S Sbjct: 2631 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2661 Score = 29.6 bits (65), Expect = 3.5 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 2/63 (3%) Query: 30 KRKDRSDEKSKDR--SKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGS 87 K K R K + R S+D+ S RG + RKR A S S R R S SSG Sbjct: 1495 KEKQRELVKLQRRRDSEDRREEPHRSLARRGPGRPRKRTHAPSALSPPRKRGKSGHSSGK 1554 Query: 88 STS 90 +S Sbjct: 1555 LSS 1557 >gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] Length = 2426 Score = 74.3 bits (181), Expect = 1e-13 Identities = 86/296 (29%), Positives = 121/296 (40%), Gaps = 37/296 (12%) Query: 22 STRAPSPTKRKDRSDEKSKDRSKDKGA------TKESSEKDRGRDK--TRKRRSASSGSS 73 S +P + +R+ E S + D T E S+K++ RDK K+R +S S Sbjct: 1766 SAASPVVSSMPERASESSSEEKDDYEIFVKVKDTHEKSKKNKNRDKGEKEKKRDSSLRSR 1825 Query: 74 STRSRSSSTSS-SGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHD 132 S RS+SS S +S S + SS S S RS + S SRS SS S S SR R Sbjct: 1826 SKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRS 1885 Query: 133 NRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDM 192 + R +S + +ERKR+ S + + + +R ++ Sbjct: 1886 VSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRR----------------- 1928 Query: 193 PVERMH-PHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLAPWPRPPPRRFS 251 R H P + V + + + + + R P RR Sbjct: 1929 --SRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSR 1986 Query: 252 PPRRMLPPPPMWRRSPPRMRRRS------RSPRRRSPVRRR-SRSPGRRRHRSRSS 300 P R P RRS +RRRS R R R+P+RRR SRSP RR+ RSRSS Sbjct: 1987 TPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRK-RSRSS 2041 Score = 64.3 bits (155), Expect = 1e-10 Identities = 52/155 (33%), Positives = 74/155 (47%), Gaps = 23/155 (14%) Query: 15 KENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEK--------DRGRDKTRKRR 66 K + +S TR+ S ++R+ RS S+ RSK +G S EK + R++ RKR Sbjct: 1853 KSKSHRSQTRSRSRSRRRRRS---SRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRS 1909 Query: 67 SASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSP 126 S+ + R+RS + S S S + S RS S RS S S S S +P Sbjct: 1910 SSRDNRKTVRARSRTPSRR---------SRSHTPSRRRRSRSVGRRRSFSISPSRRSRTP 1960 Query: 127 SRRRHDNRRRSRS---KSKPPKRDEKERKRRSPSP 158 SRR RRSR+ +S+ P R + RRS +P Sbjct: 1961 SRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTP 1995 Score = 61.6 bits (148), Expect = 8e-10 Identities = 52/165 (31%), Positives = 73/165 (44%), Gaps = 21/165 (12%) Query: 13 GVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKG--ATKESSEKDRGRDKTRKRRSASS 70 G KE + SS R+ S KR S+ KS+ R+ + A K SS+ R +TR R + Sbjct: 1812 GEKEKKRDSSLRSRS--KRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRR 1869 Query: 71 GSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRR 130 S+RSRS S S S S + R S+SR + + + S +PSRR Sbjct: 1870 RRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRS 1929 Query: 131 HDN----RRRSRS-------------KSKPPKRDEKERKRRSPSP 158 + RRRSRS +S+ P R + RRS +P Sbjct: 1930 RSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTP 1974 Score = 56.6 bits (135), Expect = 3e-08 Identities = 48/147 (32%), Positives = 62/147 (42%), Gaps = 10/147 (6%) Query: 16 ENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSAS-SGSSS 74 E +KK+ R ++K S +S+ + K R + RKR S S S S Sbjct: 1801 EKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQ 1860 Query: 75 TRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNR 134 TRSRS S SS S S G S S R S S S S SR DNR Sbjct: 1861 TRSRSRSRRRRRSSRSRSKSRGRRSVSKEKR--KRSPKHRSKSRERKRKRSSSR---DNR 1915 Query: 135 RRSRSKSKPPKRDEK----ERKRRSPS 157 + R++S+ P R + R+RRS S Sbjct: 1916 KTVRARSRTPSRRSRSHTPSRRRRSRS 1942 Score = 53.9 bits (128), Expect = 2e-07 Identities = 48/160 (30%), Positives = 70/160 (43%), Gaps = 8/160 (5%) Query: 7 KKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKD-KGATKESSEKDRGRDKTRKR 65 K + V + +K S + S ++ + R S+D K + ++ S + R +R+R Sbjct: 1879 KSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRR 1938 Query: 66 RSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPS 125 RS S G R RS S S S S + S + S + + S S T S + S S + Sbjct: 1939 RSRSVG----RRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRT 1994 Query: 126 PSRRRHDN---RRRSRSKSKPPKRDEKERKRRSPSPKPTK 162 PSRRR RRRS S S R + RR S P + Sbjct: 1995 PSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSRSPIR 2034 Score = 47.0 bits (110), Expect = 2e-05 Identities = 46/147 (31%), Positives = 65/147 (44%), Gaps = 8/147 (5%) Query: 7 KKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRR 66 +K+ ++N K R+ +P++R + RS+ G + S R +T RR Sbjct: 1904 RKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRR 1963 Query: 67 SAS-SGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPS 125 S + S S T SR S T S S T + S + S SRS S S S S + Sbjct: 1964 SRTPSRRSRTPSRRSRTPSRRSRTPS-RRSRTPSRRRRSRSVVRRRSFSISPVRLRRSRT 2022 Query: 126 PSRRRHD----NRRRSRS--KSKPPKR 146 P RRR R+RSRS + + PKR Sbjct: 2023 PLRRRFSRSPIRRKRSRSSERGRSPKR 2049 Score = 36.6 bits (83), Expect = 0.028 Identities = 30/68 (44%), Positives = 34/68 (50%), Gaps = 10/68 (14%) Query: 248 RRFSPPRRMLPPPPMWRRSPPR-----MRRRSRSPRRRSPV-----RRRSRSPGRRRHRS 297 R+ SP R +RS R +R RSR+P RRS RRRSRS GRRR S Sbjct: 1891 RKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFS 1950 Query: 298 RSSSNSSR 305 S S SR Sbjct: 1951 ISPSRRSR 1958 Score = 31.2 bits (69), Expect = 1.2 Identities = 23/46 (50%), Positives = 24/46 (52%), Gaps = 4/46 (8%) Query: 264 RRSPPRMRRRSRSPR---RRSPVRRRSRSPGRRR-HRSRSSSNSSR 305 R S R R R RS + RS R RSRS RRR RSRS S R Sbjct: 1839 RTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRR 1884 Score = 30.0 bits (66), Expect = 2.7 Identities = 23/52 (44%), Positives = 25/52 (48%), Gaps = 11/52 (21%) Query: 265 RSPPRMRRRSRSPRRRSPVRR------RSRSP-----GRRRHRSRSSSNSSR 305 RS R RRRS R +S RR R RSP R R R RSSS +R Sbjct: 1864 RSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNR 1915 >gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] Length = 2303 Score = 74.3 bits (181), Expect = 1e-13 Identities = 86/296 (29%), Positives = 121/296 (40%), Gaps = 37/296 (12%) Query: 22 STRAPSPTKRKDRSDEKSKDRSKDKGA------TKESSEKDRGRDK--TRKRRSASSGSS 73 S +P + +R+ E S + D T E S+K++ RDK K+R +S S Sbjct: 1766 SAASPVVSSMPERASESSSEEKDDYEIFVKVKDTHEKSKKNKNRDKGEKEKKRDSSLRSR 1825 Query: 74 STRSRSSSTSS-SGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHD 132 S RS+SS S +S S + SS S S RS + S SRS SS S S SR R Sbjct: 1826 SKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRS 1885 Query: 133 NRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDM 192 + R +S + +ERKR+ S + + + +R ++ Sbjct: 1886 VSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRR----------------- 1928 Query: 193 PVERMH-PHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLAPWPRPPPRRFS 251 R H P + V + + + + + R P RR Sbjct: 1929 --SRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSR 1986 Query: 252 PPRRMLPPPPMWRRSPPRMRRRS------RSPRRRSPVRRR-SRSPGRRRHRSRSS 300 P R P RRS +RRRS R R R+P+RRR SRSP RR+ RSRSS Sbjct: 1987 TPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRK-RSRSS 2041 Score = 64.3 bits (155), Expect = 1e-10 Identities = 52/155 (33%), Positives = 74/155 (47%), Gaps = 23/155 (14%) Query: 15 KENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEK--------DRGRDKTRKRR 66 K + +S TR+ S ++R+ RS S+ RSK +G S EK + R++ RKR Sbjct: 1853 KSKSHRSQTRSRSRSRRRRRS---SRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRS 1909 Query: 67 SASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSP 126 S+ + R+RS + S S S + S RS S RS S S S S +P Sbjct: 1910 SSRDNRKTVRARSRTPSRR---------SRSHTPSRRRRSRSVGRRRSFSISPSRRSRTP 1960 Query: 127 SRRRHDNRRRSRS---KSKPPKRDEKERKRRSPSP 158 SRR RRSR+ +S+ P R + RRS +P Sbjct: 1961 SRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTP 1995 Score = 61.6 bits (148), Expect = 8e-10 Identities = 52/165 (31%), Positives = 73/165 (44%), Gaps = 21/165 (12%) Query: 13 GVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKG--ATKESSEKDRGRDKTRKRRSASS 70 G KE + SS R+ S KR S+ KS+ R+ + A K SS+ R +TR R + Sbjct: 1812 GEKEKKRDSSLRSRS--KRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRR 1869 Query: 71 GSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRR 130 S+RSRS S S S S + R S+SR + + + S +PSRR Sbjct: 1870 RRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRS 1929 Query: 131 HDN----RRRSRS-------------KSKPPKRDEKERKRRSPSP 158 + RRRSRS +S+ P R + RRS +P Sbjct: 1930 RSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTP 1974 Score = 56.6 bits (135), Expect = 3e-08 Identities = 48/147 (32%), Positives = 62/147 (42%), Gaps = 10/147 (6%) Query: 16 ENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSAS-SGSSS 74 E +KK+ R ++K S +S+ + K R + RKR S S S S Sbjct: 1801 EKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQ 1860 Query: 75 TRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNR 134 TRSRS S SS S S G S S R S S S S SR DNR Sbjct: 1861 TRSRSRSRRRRRSSRSRSKSRGRRSVSKEKR--KRSPKHRSKSRERKRKRSSSR---DNR 1915 Query: 135 RRSRSKSKPPKRDEK----ERKRRSPS 157 + R++S+ P R + R+RRS S Sbjct: 1916 KTVRARSRTPSRRSRSHTPSRRRRSRS 1942 Score = 53.9 bits (128), Expect = 2e-07 Identities = 48/160 (30%), Positives = 70/160 (43%), Gaps = 8/160 (5%) Query: 7 KKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKD-KGATKESSEKDRGRDKTRKR 65 K + V + +K S + S ++ + R S+D K + ++ S + R +R+R Sbjct: 1879 KSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRR 1938 Query: 66 RSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPS 125 RS S G R RS S S S S + S + S + + S S T S + S S + Sbjct: 1939 RSRSVG----RRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRT 1994 Query: 126 PSRRRHDN---RRRSRSKSKPPKRDEKERKRRSPSPKPTK 162 PSRRR RRRS S S R + RR S P + Sbjct: 1995 PSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSRSPIR 2034 Score = 47.0 bits (110), Expect = 2e-05 Identities = 46/147 (31%), Positives = 65/147 (44%), Gaps = 8/147 (5%) Query: 7 KKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRR 66 +K+ ++N K R+ +P++R + RS+ G + S R +T RR Sbjct: 1904 RKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRR 1963 Query: 67 SAS-SGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPS 125 S + S S T SR S T S S T + S + S SRS S S S S + Sbjct: 1964 SRTPSRRSRTPSRRSRTPSRRSRTPS-RRSRTPSRRRRSRSVVRRRSFSISPVRLRRSRT 2022 Query: 126 PSRRRHD----NRRRSRS--KSKPPKR 146 P RRR R+RSRS + + PKR Sbjct: 2023 PLRRRFSRSPIRRKRSRSSERGRSPKR 2049 Score = 36.6 bits (83), Expect = 0.028 Identities = 30/68 (44%), Positives = 34/68 (50%), Gaps = 10/68 (14%) Query: 248 RRFSPPRRMLPPPPMWRRSPPR-----MRRRSRSPRRRSPV-----RRRSRSPGRRRHRS 297 R+ SP R +RS R +R RSR+P RRS RRRSRS GRRR S Sbjct: 1891 RKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFS 1950 Query: 298 RSSSNSSR 305 S S SR Sbjct: 1951 ISPSRRSR 1958 Score = 31.2 bits (69), Expect = 1.2 Identities = 23/46 (50%), Positives = 24/46 (52%), Gaps = 4/46 (8%) Query: 264 RRSPPRMRRRSRSPR---RRSPVRRRSRSPGRRR-HRSRSSSNSSR 305 R S R R R RS + RS R RSRS RRR RSRS S R Sbjct: 1839 RTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRR 1884 Score = 30.0 bits (66), Expect = 2.7 Identities = 23/52 (44%), Positives = 25/52 (48%), Gaps = 11/52 (21%) Query: 265 RSPPRMRRRSRSPRRRSPVRR------RSRSP-----GRRRHRSRSSSNSSR 305 RS R RRRS R +S RR R RSP R R R RSSS +R Sbjct: 1864 RSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNR 1915 >gi|9558733 transformer-2 alpha [Homo sapiens] Length = 282 Score = 73.6 bits (179), Expect = 2e-13 Identities = 60/191 (31%), Positives = 97/191 (50%), Gaps = 12/191 (6%) Query: 53 SEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTS 112 S+ + + R+ RS S + T +R S S SGS + + S S S S S RS S S S Sbjct: 2 SDVEENNFEGRESRSQSKSPTGTPARVKSESRSGSRSPSRVSKHSESHSRS-RSKSRSRS 60 Query: 113 RSSSSSSSSGSPSPS---RRRHDNR------RRSRSKSKPPKRDEKERKRRSPSPKP-TK 162 R S + S S S RRR +R RR RS+S P + + +P P T Sbjct: 61 RRHSHRRYTRSRSHSHSHRRRSRSRSYTPEYRRRRSRSHSPMSNRRRHTGSRANPDPNTC 120 Query: 163 VHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKH 222 + + L+ T+ + E+FS YG + +++ V S+G+A+V FE D++++A++ Sbjct: 121 LGVFGLSLYTTERDLREVFSRYGPLSGVNV-VYDQRTGRSRGFAFVYFERIDDSKEAMER 179 Query: 223 MDGGQIDGQEI 233 +G ++DG+ I Sbjct: 180 ANGMELDGRRI 190 Score = 32.7 bits (73), Expect = 0.41 Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 253 PRRMLPPPPMWRRSPPRMRRRSRS-PRRRSPVRRRSRSPGRRRH-RSRSSSNSSR 305 P R+ RSP R+ + S S R RS R RSR RR+ RSRS S+S R Sbjct: 25 PARVKSESRSGSRSPSRVSKHSESHSRSRSKSRSRSRRHSHRRYTRSRSHSHSHR 79 Score = 30.4 bits (67), Expect = 2.0 Identities = 20/36 (55%), Positives = 21/36 (58%), Gaps = 2/36 (5%) Query: 269 RMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSSSNSS 304 R R S S RRRS R RS +P RR RSRS S S Sbjct: 70 RSRSHSHSHRRRS--RSRSYTPEYRRRRSRSHSPMS 103 >gi|4506901 splicing factor, arginine/serine-rich 3 [Homo sapiens] Length = 164 Score = 72.4 bits (176), Expect = 5e-13 Identities = 56/154 (36%), Positives = 71/154 (46%), Gaps = 22/154 (14%) Query: 154 RSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENP 213 R P KV++G L N K + F YG ++ + V R P G+A+VEFE+P Sbjct: 3 RDSCPLDCKVYVGNLGNNGNKTELERAFGYYGPLRSVW--VARNPP----GFAFVEFEDP 56 Query: 214 DEAEKALKHMDGGQIDGQEITATAVLAPWPRPPPRRFSPPRRMLPPPPMWRRSP-PRMRR 272 +A A++ +DG + G + R R PPP W R P RR Sbjct: 57 RDAADAVRELDGRTLCGCRV----------RVELSNGEKRSRNRGPPPSWGRRPRDDYRR 106 Query: 273 RSRSPRRRSPVRR-----RSRSPGRRRHRSRSSS 301 RS PRRRSP RR RSRS R R R RS S Sbjct: 107 RSPPPRRRSPRRRSFSRSRSRSLSRDRRRERSLS 140 Score = 30.0 bits (66), Expect = 2.7 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 8/62 (12%) Query: 24 RAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKR-RSASSGSSSTRSRSSST 82 R+P P +R R S+ RS+ S +DR R+++ R R+ S +RSRS S Sbjct: 107 RSPPPRRRSPRRRSFSRSRSR-------SLSRDRRRERSLSRERNHKPSRSFSRSRSRSR 159 Query: 83 SS 84 S+ Sbjct: 160 SN 161 >gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] Length = 904 Score = 71.2 bits (173), Expect = 1e-12 Identities = 103/373 (27%), Positives = 138/373 (36%), Gaps = 109/373 (29%) Query: 24 RAPSPTK--RKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSS------- 74 + PSP K +K++ EK++ RS+ + ++ S + R TR RR S S S Sbjct: 257 KEPSPEKNSKKEKEKEKTRPRSRSRSKSR-SRTRSRSPSHTRPRRRHRSRSRSYSPRRRP 315 Query: 75 --------------------TRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRS 114 R R S + S+ S SGSSSSS+SSRS S Sbjct: 316 SPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPP 375 Query: 115 SSSSSS-------SGSPSPSRRRH--------------------DNRRRSRSKSKPPKRD 147 +SS S S SP RRRH NR R S P R Sbjct: 376 KRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRT 435 Query: 148 E---------KERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVE--- 195 ++R+ SP+PKP KV + + GK+ D + Sbjct: 436 SGKVTKHKGTEKRESPSPAPKPRKVELSESEED-----------KGGKMAAADSVQQRRQ 484 Query: 196 -RMHPHLSKGYAYVEFENPDEAEKALKHMDGGQID-GQEITATAVLAPWPR--------- 244 R S + + DE K H+ G++ + + + +P PR Sbjct: 485 YRRQNQQSSSDSGSSSSSEDERPKR-SHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPR 543 Query: 245 --------PPP--RRFSPP------RRMLPPPPMWRRSP-PRMRRRSRSPRRRSPVRRRS 287 PPP RR SP RR P PP RR+P P RRRS SPRR SP +R Sbjct: 544 GRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRR 603 Query: 288 RSPGRRRHRSRSS 300 SP R +S Sbjct: 604 YSPSPPPKRRTAS 616 Score = 67.8 bits (164), Expect = 1e-11 Identities = 86/307 (28%), Positives = 114/307 (37%), Gaps = 59/307 (19%) Query: 28 PTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGS 87 P+ + E+ K R ++ ++D +DK K SS RSRS S S Sbjct: 120 PSAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRS 179 Query: 88 STSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRD 147 S SS R S SRS + S SPSP+ + K K P+ Sbjct: 180 P------SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEK---------KEKTPELP 224 Query: 148 EKERKRRSPS-------------PKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPV 194 E K + PS PKP + K+ E S K K P Sbjct: 225 EPSVKVKEPSVQEATSTSDILKVPKPEPIP-------EPKEPSPEKNSKKEKEKEKTRPR 277 Query: 195 ERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLAPWPRPPPRRFSPPR 254 R SK + +P +H + + +P RP PRR +PPR Sbjct: 278 SRSR---SKSRSRTRSRSPSHTRPRRRHRSRSR----SYSPRRRPSPRRRPSPRRRTPPR 330 Query: 255 RMLPPPPMWR--RSPPRMRRR-----------SRSPRRRSPVR---RRSRSPGRRRHRSR 298 RM PPPP R RSP R RRR S S R RSP + +R+ SP R+ R Sbjct: 331 RM-PPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLS 389 Query: 299 SSSNSSR 305 S++ R Sbjct: 390 PSASPPR 396 Score = 66.6 bits (161), Expect = 3e-11 Identities = 94/341 (27%), Positives = 127/341 (37%), Gaps = 79/341 (23%) Query: 15 KENNKKSSTRAPSPTKRKDRSDEKSKD----------RSKDKGATKESSEKDRGRDKTRK 64 K+ +K TR S ++ K RS +S+ RS+ + + R R R+ Sbjct: 266 KKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRR 325 Query: 65 RRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS---- 120 R R R S + S+ S SGSSSSS+SSRS S +SS Sbjct: 326 RTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKT 385 Query: 121 ---SGSPSPSRRRH--------------------DNRRRSRSKSKPPKRDE--------- 148 S S SP RRRH NR R S P R Sbjct: 386 RRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGT 445 Query: 149 KERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMH----PHLSKG 204 ++R+ SP+PKP KV + + GK+ D +R S Sbjct: 446 EKRESPSPAPKPRKVELSESEEDKG-----------GKMAAADSVQQRRQYRRQNQQSSS 494 Query: 205 YAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLA-PWPRPPPRRFSPPRRMLPPPPMW 263 + + DE K H+ G++ + + + A P PR + SP R P Sbjct: 495 DSGSSSSSEDERPKR-SHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSP--- 550 Query: 264 RRSPPRMRRRSRSP-------RRRSPV---RRRSRSPGRRR 294 SPP RRR RSP RRR+P RRR+ SP RR Sbjct: 551 --SPPPTRRR-RSPSPAPPPRRRRTPTPPPRRRTPSPPPRR 588 Score = 55.5 bits (132), Expect = 6e-08 Identities = 67/319 (21%), Positives = 118/319 (36%), Gaps = 39/319 (12%) Query: 6 VKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD----K 61 ++++ L +K+ ++ R K + S + ++RS+ K S R R + Sbjct: 136 IEQEKLASMKKQDEDKDKR----DKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRR 191 Query: 62 TRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSS 121 RKR + S T+SRS S + + S S ++STS Sbjct: 192 ERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATSTSDILKVPKPE 251 Query: 122 GSP---SPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIM 178 P PS ++ + + + K++P R + + R+ S P+ R R+ ++ + Sbjct: 252 PIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSP 311 Query: 179 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKA-----LKHMDGGQIDGQEI 233 P R P + P ++ + + G Sbjct: 312 R-----------RRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSS 360 Query: 234 TATAVLAPWPRPPPRRFSPPRRMLPPPPMWRR-----SPPRMRRRSRSPRRRSPVRRRSR 288 ++++ + R PP++ PP+R PP RR SPPR R R P P R S Sbjct: 361 SSSSSRS---RSPPKK--PPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSP 415 Query: 289 SP--GRRRHRSRSSSNSSR 305 +P R +SR S + R Sbjct: 416 TPQQSNRTRKSRVSVSPGR 434 Score = 54.7 bits (130), Expect = 1e-07 Identities = 84/327 (25%), Positives = 114/327 (34%), Gaps = 87/327 (26%) Query: 16 ENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSST 75 + +K + +P+P RK E +D+ A D ++RR Sbjct: 443 KGTEKRESPSPAPKPRKVELSESEEDKGGKMAAA----------DSVQQRRQYR------ 486 Query: 76 RSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNR- 134 R S+S SGSS+S+ S + G R S S S SPSP +R+ + Sbjct: 487 RQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGR----RRRHSPSRSASPSPRKRQKETSP 542 Query: 135 --RRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDM 192 RR RS S PP R +RRSPSP P R R T + + Sbjct: 543 RGRRRRSPSPPPTR-----RRRSPSPAPPP----RRRRTPTPPP---------RRRTPSP 584 Query: 193 PVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLAPW----PRPPPR 248 P R P +P ++ + TA+ P P PPP+ Sbjct: 585 PPRRRSP------------SPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPK 632 Query: 249 R---FSPPRRMLPPPPMWRRSPPRM----------------------RRRSRSPRRRSPV 283 R SPP + P RRSP +R S SPR R+P Sbjct: 633 RRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQ 692 Query: 284 RRRSRSPGRR-----RHRSRSSSNSSR 305 S P RR R +S S S+R Sbjct: 693 TSSSPPPVRRGASSSPQRRQSPSPSTR 719 Score = 52.4 bits (124), Expect = 5e-07 Identities = 83/332 (25%), Positives = 111/332 (33%), Gaps = 50/332 (15%) Query: 10 SLLGVKENNKKSSTRAP--SPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRS 67 SL G ++ S +R+P P KR K++ S + K R Sbjct: 354 SLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRH 413 Query: 68 ASSGSSSTRSRSSSTSSSGSSTS------TGSSSGSSSSSASS-RSGSSSTSRSSSSSSS 120 + + S R+R S S S TS G+ S S A R S S Sbjct: 414 SPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKM 473 Query: 121 SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI 180 + + S +RR R+ +S S E +R PK + V G + R Sbjct: 474 AAADSVQQRRQYRRQNQQSSSDSGSSSSSEDER----PKRSHVKNGEVGRRRRHSPSRSA 529 Query: 181 FSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLA 240 + K + P R S P + + Sbjct: 530 SPSPRKRQKETSPRGRRRRSPS----------PPPTRRRRSPSPAPPPRRRRTPTPPPRR 579 Query: 241 PWPRPPPRRFSP-PRRMLPP--------PPMWRR--------------SPPRMRRRSRSP 277 P PPPRR SP PRR PP PP RR SPP RR S SP Sbjct: 580 RTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSP 639 Query: 278 ---RRRSPV-RRRSRSPGRRRHRSRSSSNSSR 305 +R SPV +RRS S + + S S S+R Sbjct: 640 PPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTR 671 Score = 48.9 bits (115), Expect = 6e-06 Identities = 74/298 (24%), Positives = 105/298 (35%), Gaps = 77/298 (25%) Query: 8 KKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRS 67 K +G + + S + +PSP KR+ + + + R + TR+RRS Sbjct: 513 KNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRR------------RSPSPPPTRRRRS 560 Query: 68 ASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPS 127 S R R+ + + S R S S R S SPSP Sbjct: 561 PSPAPPPRRRRTPTPPPR-----------RRTPSPPPRRRSPSPRRYSPPIQRRYSPSP- 608 Query: 128 RRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKI 187 +RR+ S PPKR R SPSP P + R++ + Sbjct: 609 ----PPKRRTASPPPPPKR------RASPSPPPKR----RVSHSPPP------------- 641 Query: 188 KMIDMPV-ERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLAPWPR-- 244 K PV +R P LS KH G + +P P Sbjct: 642 KQRSSPVTKRRSPSLSS-----------------KHRKG---SSPSRSTREARSPQPNKR 681 Query: 245 --PPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS 300 P PR +P PPP S RR+S SP R P+RR SR+P ++ + +S Sbjct: 682 HSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTR-PIRRVSRTPEPKKIKKAAS 738 Score = 46.2 bits (108), Expect = 4e-05 Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 11/216 (5%) Query: 22 STRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSS 81 ++ +P P +R S + R +T+ R + + +++AS S R SSS Sbjct: 693 TSSSPPPVRRGASSSPQR--RQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSS 750 Query: 82 TSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRS---SSSSSSSGSPSPSR---RRHDNRR 135 S SGS + S S+S S++ S + + S + SPSP R + ++ Sbjct: 751 RSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEGGGKK 810 Query: 136 RSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVE 195 + + K K K+D+K +K + K K VT I +T + + + P Sbjct: 811 KKKKKDKKHKKDKKHKKHK--KHKKEKAVAAAAAAAVTPAAIAAATTTLAQEEPVAAPEP 868 Query: 196 RMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQ 231 + S+ ++ EKAL+ M Q+ Q Sbjct: 869 KKETE-SEAEDNLDDLEKHLREKALRSMRKAQVSPQ 903 Score = 43.5 bits (101), Expect = 2e-04 Identities = 46/148 (31%), Positives = 62/148 (41%), Gaps = 17/148 (11%) Query: 19 KKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSE---KDRGRDKTRKRRSASSGSSST 75 K+ + P P KR+ K R K+ S K R + K R SS S ST Sbjct: 611 KRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRST 670 Query: 76 R-SRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNR 134 R +RS + S + + +SSS R G +SSS SPSPS R Sbjct: 671 REARSPQPNKRHSPSPRPRAPQTSSSPPPVRRG------ASSSPQRRQSPSPSTR----P 720 Query: 135 RRSRSKSKPPKRDEKERKRRSPSPKPTK 162 R S++ PK K +K SPSP+ + Sbjct: 721 IRRVSRTPEPK---KIKKAASPSPQSVR 745 Score = 43.5 bits (101), Expect = 2e-04 Identities = 46/179 (25%), Positives = 69/179 (38%), Gaps = 35/179 (19%) Query: 19 KKSSTRAPSPTKR-------KDRSDEKSKDRSKDKGAT-KESSEKDRGRDKTRKRRSASS 70 K+ ++ +P P +R K RS +K RS + ++ S R + R + Sbjct: 622 KRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKR 681 Query: 71 GSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRS----------------------GS 108 S S R R+ TSSS G+SS + S S Sbjct: 682 HSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSP 741 Query: 109 SSTSRSSSSSSSSGSPSPSRRRHDN-----RRRSRSKSKPPKRDEKERKRRSPSPKPTK 162 S R SSS S SGSP P+ ++ + +S S + P K+ K +PSP P + Sbjct: 742 QSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPR 800 Score = 31.2 bits (69), Expect = 1.2 Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 3/70 (4%) Query: 19 KKSSTRAPSPTKRKDRSDE---KSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSST 75 KK+ + PSP+ ++ E K K + KDK K+ K + K K +A++ ++ T Sbjct: 787 KKAKSPTPSPSPPRNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAVAAAAAAAVT 846 Query: 76 RSRSSSTSSS 85 + ++ +++ Sbjct: 847 PAAIAAATTT 856 >gi|14790190 spen homolog, transcriptional regulator [Homo sapiens] Length = 3664 Score = 70.5 bits (171), Expect = 2e-12 Identities = 72/240 (30%), Positives = 105/240 (43%), Gaps = 30/240 (12%) Query: 22 STRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKD----------RGRDKTRK---RRSA 68 ++R+ SP R D D + + R++++ +D RGR R RS Sbjct: 185 ASRSRSPN-RFDAHDPRYEPRAREQFTLPSVVHRDIYRDDITREVRGRRPERNYQHSRSR 243 Query: 69 SSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSR 128 S SS +R++S +S +S T S SGS S S SS S S S SSSS+SS S S S Sbjct: 244 SPHSSQSRNQSPQRLASQASRPTRSPSGSGSRSRSSSSDSIS---SSSSTSSDSSDSSSS 300 Query: 129 RRHDNRRRSRSKSKPPKRD-------EKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIF 181 D+ RS + P EK+ R+S K + + R T KD + F Sbjct: 301 SSDDSPARSVQSAAVPAPTSQLLSSLEKDEPRKSFGIKVQNLPV-RSTDTSLKDGLFHEF 359 Query: 182 STYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLAP 241 +GK+ + ++H + Y V F ++ EKAL G G +I TA + P Sbjct: 360 KKFGKVTSV-----QIHGTSEERYGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGP 414 Score = 37.0 bits (84), Expect = 0.022 Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 17/134 (12%) Query: 42 RSKDKGATKESSEKDRGRDKTRK-----------RRSASSGSSSTRS-RSSSTSSSGSST 89 R +++ +E E DR RD R+ RR S G+S +++ R S S + Sbjct: 698 RQRERERERERFESDRDRDHERRPIERSQSPVHLRRPQSPGASPSQAERLPSDSERRLYS 757 Query: 90 STGSSSGSSSSSASSRSGSSSTSR-----SSSSSSSSGSPSPSRRRHDNRRRSRSKSKPP 144 + SGS SS + R SR + + + P R + R + K + Sbjct: 758 RSSDRSGSCSSLSPPRYEKLDKSRLERYTKNEKTDKERTFDPERVERERRLIRKEKVEKD 817 Query: 145 KRDEKERKRRSPSP 158 K D+++RK + SP Sbjct: 818 KTDKQKRKGKVHSP 831 Score = 36.2 bits (82), Expect = 0.037 Identities = 62/272 (22%), Positives = 98/272 (36%), Gaps = 80/272 (29%) Query: 30 KRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSAS--------------SGSSST 75 +R +R+ + S+ RS ++ S + +R RS S S SSST Sbjct: 231 RRPERNYQHSRSRSPHSSQSRNQSPQRLASQASRPTRSPSGSGSRSRSSSSDSISSSSST 290 Query: 76 RSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTS-----------------RSSSSS 118 S SS +SSS S S S S++ A + SS RS+ +S Sbjct: 291 SSDSSDSSSSSSDDSPARSVQSAAVPAPTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTS 350 Query: 119 SSSG-----------------SPSPSR------RRHDNRRRSRSKSK------------- 142 G S R R+ +++ ++ + SK Sbjct: 351 LKDGLFHEFKKFGKVTSVQIHGTSEERYGLVFFRQQEDQEKALTASKGKLFFGMQIEVTA 410 Query: 143 ---PPKRDEKERKRRSPS-----PKPTK-VHIGRLTRNVTKDHIMEIFSTYGKIKMIDMP 193 P E E + PK T+ + IG L + T + IF +G+I ID+ Sbjct: 411 WIGPETESENEFRPLDERIDEFHPKATRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIK 470 Query: 194 VERMHPHLSKGYAYVEFENPDEAEKALKHMDG 225 P YA++++ + KA+K MDG Sbjct: 471 KVNGVPQ----YAFLQYCDIASVCKAIKKMDG 498 Score = 34.3 bits (77), Expect = 0.14 Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 14/116 (12%) Query: 50 KESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSS 109 +E S + R R++ R+R + R R S S S G+S S A S Sbjct: 693 REYSYRQRERERERERFESDRDRDHER-RPIERSQSPVHLRRPQSPGASPSQAERLPSDS 751 Query: 110 ST---SRSSSSSSSSGSPSPSR----------RRHDNRRRSRSKSKPPKRDEKERK 152 SRSS S S S SP R R N + + ++ P+R E+ER+ Sbjct: 752 ERRLYSRSSDRSGSCSSLSPPRYEKLDKSRLERYTKNEKTDKERTFDPERVERERR 807 Score = 32.7 bits (73), Expect = 0.41 Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 21/161 (13%) Query: 19 KKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKT----------RKRRSA 68 + +T P S + K ++ G+ ++ KD G DK K+ + Sbjct: 2010 RPEATTEVGPQIGVKESSMEPKAAEEEAGSEQKRDRKDAGTDKNPPETAPVEVVEKKPAP 2069 Query: 69 SSGSSSTRSRS--SSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSP 126 S S R RS S + S++ + S A++++G + + S S SP Sbjct: 2070 EKNSKSKRGRSRNSRLAVDKSASLKNVDAAVSPRGAAAQAGERESGVVAVSPEKSESP-- 2127 Query: 127 SRRRHDNRRRSRSKSKPPKRDEKERKR----RSPSPKPTKV 163 + ++ S+ KS P D++ K PSP+ T++ Sbjct: 2128 ---QKEDGLSSQLKSDPVDPDKEPEKEDVSASGPSPEATQL 2165 Score = 31.6 bits (70), Expect = 0.91 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Query: 265 RSPPRMRRRSRSPRR-RSPVRRRSRSPGRRRHRSRSSSNSS 304 RSP + R++SP+R S R +RSP RSRSSS+ S Sbjct: 243 RSPHSSQSRNQSPQRLASQASRPTRSPSGSGSRSRSSSSDS 283 Score = 30.0 bits (66), Expect = 2.7 Identities = 28/148 (18%), Positives = 57/148 (38%), Gaps = 15/148 (10%) Query: 21 SSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSS 80 ++ R P K + R+DE+ ++ +K+ T + E G R +++A+ G Sbjct: 1946 TTPRRGRPPKTRRRADEEEENEAKEPAETLKPPE---GWRSPRSQKTAAGG--------- 1993 Query: 81 STSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSK 140 G ++ A++ G + SS + + +R+ + + Sbjct: 1994 --GPQGKKGKNEPKVDATRPEATTEVGPQIGVKESSMEPKAAEEEAGSEQKRDRKDAGTD 2051 Query: 141 SKPPKRDEKERKRRSPSP-KPTKVHIGR 167 PP+ E + P+P K +K GR Sbjct: 2052 KNPPETAPVEVVEKKPAPEKNSKSKRGR 2079 >gi|224548936 hypothetical protein LOC100170229 [Homo sapiens] Length = 715 Score = 69.3 bits (168), Expect = 4e-12 Identities = 72/281 (25%), Positives = 116/281 (41%), Gaps = 37/281 (13%) Query: 20 KSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRS 79 + +R+ SP K +D S +S +++D+ S ++ RD +R R S + RSRS Sbjct: 423 RDRSRSRSPNKARDCSRSRSPYKARDR---SRSRSPNKARDHSRSR---SPNKARDRSRS 476 Query: 80 SSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS------SGSPSPSRRRHD- 132 S S + GS S S R S SSS S SPS R+R Sbjct: 477 RSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQS 536 Query: 133 ---NRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKM 189 N+ R RS+S+ P + + R+ RSPS + + R R+ +K+ E + + Sbjct: 537 RSPNKERDRSQSRSPSEEREHRQSRSPSKERDR----RRWRSPSKER--ERRQSRSSSEE 590 Query: 190 IDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLAPWPRPPPRR 249 D R P+ GY+ + ++A + Q T++ + Sbjct: 591 RDHSRSR-SPNKQSGYSRPRASSKEKAHSRSRTPSKEGNHSQSRTSS-----------KE 638 Query: 250 FSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSP 290 P + +P P W+RSP R S++ R+P + S SP Sbjct: 639 SDPSQSTVPRSPDWKRSPTRTSSLSQN---RTPSKTSSHSP 676 Score = 65.9 bits (159), Expect = 4e-11 Identities = 82/325 (25%), Positives = 126/325 (38%), Gaps = 37/325 (11%) Query: 14 VKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEK-----DRGRDKTRK---- 64 VK N+ +STR+ + + RS +S+ S+ + ++ S R R +TRK Sbjct: 266 VKSYNQ-ASTRSRPQSHSQSRSPRRSRSGSQKRTHSRVRSHSWKRNHSRARSRTRKGILS 324 Query: 65 -------RRSASSGSSSTRSRSS----STSSSGSSTSTGSSSGSSSSSASSRSGSSSTSR 113 RS S G S +SR+ S + S + + S S S SSS SS+ R Sbjct: 325 QMGRHSQSRSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPR 384 Query: 114 SSSSSSSSGSPSP----SRRRHDNRRRSRSKSKPPKRDEKERKRRSP----------SPK 159 S S SGSP+ SR R N+ R RS+S+ P + + RSP SP Sbjct: 385 KESGRSQSGSPNKQRDHSRSRSPNKARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPY 444 Query: 160 PTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENP-DEAEK 218 + + N +DH + + + H G E ++ + Sbjct: 445 KARDRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPS 504 Query: 219 ALKHMDGGQIDGQEITATAVLAPWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPR 278 + + +E +P R+ P + S R R+SRSP Sbjct: 505 KERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPS 564 Query: 279 RRSPVRRRSRSPGRRRHRSRSSSNS 303 + RRR RSP + R R +S S+S Sbjct: 565 KERD-RRRWRSPSKERERRQSRSSS 588 Score = 56.2 bits (134), Expect = 3e-08 Identities = 86/331 (25%), Positives = 129/331 (38%), Gaps = 57/331 (17%) Query: 4 SGVKKKSLLGVKENN-KKSSTRAPSPTKRKDRSD--EKSKDRSKDKGATKESSEKDR-GR 59 SG +K++ V+ ++ K++ +RA S T++ S S+ RS KG ++ S R GR Sbjct: 292 SGSQKRTHSRVRSHSWKRNHSRARSRTRKGILSQMGRHSQSRSHSKGKSQNQSRTPRRGR 351 Query: 60 DKT-----RKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSAS-SRSGSSSTSR 113 K RS S SS++ R SSS S S SGS + SRS S + +R Sbjct: 352 SHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKAR 411 Query: 114 SSSSSSS-------SGSPSPSRRRHDNRRRS------RSKSKPPKRDEKERKRRSP---- 156 S S S S S SP++ R +R RS RS+S+ P + + RSP Sbjct: 412 DRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKARDRSRSRSPNKARDHSRSRSPNKAR 471 Query: 157 ------SPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEF 210 SP + H + + +DH + P + S+ + Sbjct: 472 DRSRSRSPSKERDHSQLGSPSKERDH-----------RRSRSPSKERQCRQSRSSSKERD 520 Query: 211 ENPDEAEKALKHMDGGQIDGQEITATAVLAPWPRPPPRRFSPPRRMLPPPPMWRRSPPRM 270 + + + +E + +P R+ P S R Sbjct: 521 HRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSP------------SKERD 568 Query: 271 RRRSRSPRRRSPVRRRSRSPGRRRHRSRSSS 301 RRR RSP + RR+SRS R SRS S Sbjct: 569 RRRWRSPSKERE-RRQSRSSSEERDHSRSRS 598 Score = 55.5 bits (132), Expect = 6e-08 Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 15/162 (9%) Query: 17 NNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEK-----DRGRDKTRKRRSASSG 71 + ++ R+ SP+K + R +S ++ +D+ ++ SE+ R K R RR S Sbjct: 516 SKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSP 575 Query: 72 SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRH 131 S R S +SS S S S + +SG S SS + S S +PS+ + Sbjct: 576 SKERERRQSRSSSE-------ERDHSRSRSPNKQSGYSRPRASSKEKAHSRSRTPSKEGN 628 Query: 132 DNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVT 173 ++ R+ SK P + RSP K + L++N T Sbjct: 629 HSQSRTSSKESDPSQSTVP---RSPDWKRSPTRTSSLSQNRT 667 Score = 49.7 bits (117), Expect = 3e-06 Identities = 80/318 (25%), Positives = 110/318 (34%), Gaps = 57/318 (17%) Query: 4 SGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRS-KDKGATKESSEKDRGRDKT 62 SG+ + S L V + K T P+K K + S R K G S + Sbjct: 202 SGIGRSSELAVTPSTAKCQTPTGIPSKEKSDNPSPSSSRKVKSYGQMIIPSREKSYSPTE 261 Query: 63 RKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSS-ASSRSGSSSTSRSSSSSSS- 120 R S +STRSR S S S S + S S + S S S + SR+ S + Sbjct: 262 MSSRVKSYNQASTRSRPQSHSQSRSPRRSRSGSQKRTHSRVRSHSWKRNHSRARSRTRKG 321 Query: 121 --SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIM 178 S S+ R ++ +S+++S+ P+R R+PS Sbjct: 322 ILSQMGRHSQSRSHSKGKSQNQSRTPRRGRSHNWSRNPSK-------------------- 361 Query: 179 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAV 238 ER H H + K G + Q + + Sbjct: 362 ----------------ERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSR 405 Query: 239 LAPWPRPPPRRFSPPRRMLPPPPMWRRSPPRMR--RRSRSP-------RRRSPVR----R 285 R R SP + RSP + R RSRSP R RSP + Sbjct: 406 SPNKARDRSRSRSPYKAR---DRSRSRSPNKARDCSRSRSPYKARDRSRSRSPNKARDHS 462 Query: 286 RSRSPGRRRHRSRSSSNS 303 RSRSP + R RSRS S S Sbjct: 463 RSRSPNKARDRSRSRSPS 480 Score = 47.4 bits (111), Expect = 2e-05 Identities = 69/313 (22%), Positives = 119/313 (38%), Gaps = 35/313 (11%) Query: 23 TRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGS---------S 73 +R +P +R RS ++S R+ G + + + R S GS + Sbjct: 119 SRGRTPGRRGSRSSKRSPSRASTPGRIRTHGARPGMASRVRTPTSQQKGSRGKSYGRPRT 178 Query: 74 STRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRS-------SSSSSSSGSPSP 126 S R RS S + S S GS +S + + ST++ S S + SPS Sbjct: 179 SNRERSDSQPRNLSKKSYRPPGGSGIGRSSELAVTPSTAKCQTPTGIPSKEKSDNPSPSS 238 Query: 127 SRRRHDNRRR---SRSKSKPP--------------KRDEKERKRRSPSPKPTKVHIGRLT 169 SR+ + SR KS P R + +S SP+ ++ + T Sbjct: 239 SRKVKSYGQMIIPSREKSYSPTEMSSRVKSYNQASTRSRPQSHSQSRSPRRSRSGSQKRT 298 Query: 170 RNVTKDHIMEIFSTYGKIKMIDMPVERMHPH-LSKGYAYVEFENPDEAEKALKHMDGGQI 228 + + H + + + + + +M H S+ ++ + +N + + + + Sbjct: 299 HSRVRSHSWKRNHSRARSRTRKGILSQMGRHSQSRSHSKGKSQNQSRTPRRGRSHNWSRN 358 Query: 229 DGQEITATAVLAPWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSR 288 +E + + + R S PR+ + R RSRSP + R RSR Sbjct: 359 PSKERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKARD-RSRSR 417 Query: 289 SPGRRRHRSRSSS 301 SP + R RSRS S Sbjct: 418 SPYKARDRSRSRS 430 Score = 44.7 bits (104), Expect = 1e-04 Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 2/148 (1%) Query: 15 KENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSS 74 K ++K S + APS + + K AT S +R + S S S Sbjct: 5 KRSSKPSMSLAPSGSSMPTADPKPPASLKSTKSATPNRSLVPTKPATSRNSVMSPSSSKS 64 Query: 75 TRSRSSSTSSSG--SSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHD 132 T+S S+ + S SS S S + S S+ + +S S++S + SR R Sbjct: 65 TKSTSTKRAPSNRPSSRSRVRSKARTPSRVSTDTRTSKASKASDVRCHQRRGTHSRGRTP 124 Query: 133 NRRRSRSKSKPPKRDEKERKRRSPSPKP 160 RR SRS + P R + R+ +P Sbjct: 125 GRRGSRSSKRSPSRASTPGRIRTHGARP 152 Score = 40.4 bits (93), Expect = 0.002 Identities = 78/338 (23%), Positives = 129/338 (38%), Gaps = 40/338 (11%) Query: 4 SGVKKKSLLGVKENNKKSSTRAPSPTKR-KDRSDEKSKDRSKDKGATKESSEKDRGRDKT 62 S +SL+ K ++S +PS +K K S +++ + S + R T Sbjct: 37 SATPNRSLVPTKPATSRNSVMSPSSSKSTKSTSTKRAPSNRPSSRSRVRSKARTPSRVST 96 Query: 63 RKRRSASSGSSSTR--------SRSSSTSSSGSSTSTGSSSGSSSSSA----SSRSGSSS 110 R S +S +S R SR + GS +S S S +S+ +R G +S Sbjct: 97 DTRTSKASKASDVRCHQRRGTHSRGRTPGRRGSRSSKRSPSRASTPGRIRTHGARPGMAS 156 Query: 111 TSRS-SSSSSSSGSPSPSRRRHDNRRRSRSKS--------KPPKRDEKERKRR---SPS- 157 R+ +S S S R R NR RS S+ +PP R +PS Sbjct: 157 RVRTPTSQQKGSRGKSYGRPRTSNRERSDSQPRNLSKKSYRPPGGSGIGRSSELAVTPST 216 Query: 158 ---PKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLS---KGYAYVEFE 211 PT + + N + ++ +YG++ + +S K Y Sbjct: 217 AKCQTPTGIPSKEKSDNPSPSSSRKV-KSYGQMIIPSREKSYSPTEMSSRVKSYNQASTR 275 Query: 212 NPDEAEKALKHMDGGQIDGQEITATAVLA-PWPRPPPRRFSPPRRMLPPPPMWRRSPPRM 270 + ++ + + Q+ T + V + W R R S R+ + M R S R Sbjct: 276 SRPQSHSQSRSPRRSRSGSQKRTHSRVRSHSWKRNHSRARSRTRKGI-LSQMGRHSQSRS 334 Query: 271 RRRSRSPRR-RSPVRRR----SRSPGRRRHRSRSSSNS 303 + +S + R+P R R SR+P + R S S S+S Sbjct: 335 HSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSS 372 Score = 39.7 bits (91), Expect = 0.003 Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 4/104 (3%) Query: 17 NNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRR-SASSGSSST 75 + +K+ +R+ +P+K + S ++ + D + D R TR S + S T Sbjct: 612 SKEKAHSRSRTPSKEGNHSQSRTSSKESDPSQSTVPRSPDWKRSPTRTSSLSQNRTPSKT 671 Query: 76 RSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSS 119 S S ST SG T S S + A++ + RSSSSSS Sbjct: 672 SSHSPSTFPSGGQTL---SQDDSQADATTSKATLPGERSSSSSS 712 Score = 38.5 bits (88), Expect = 0.007 Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 15/144 (10%) Query: 22 STRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSS 81 ST++ +P +RS +K + SS K T KR ++ SS +R RS + Sbjct: 34 STKSATP----NRSLVPTKPATSRNSVMSPSSSKSTKSTST-KRAPSNRPSSRSRVRSKA 88 Query: 82 TSSSGSSTSTGSSSGSSSSSAS--SRSGSSST--------SRSSSSSSSSGSPSPSRRRH 131 + S ST T +S S +S R G+ S SRSS S S S R H Sbjct: 89 RTPSRVSTDTRTSKASKASDVRCHQRRGTHSRGRTPGRRGSRSSKRSPSRASTPGRIRTH 148 Query: 132 DNRRRSRSKSKPPKRDEKERKRRS 155 R S+ + P +K + +S Sbjct: 149 GARPGMASRVRTPTSQQKGSRGKS 172 Score = 37.0 bits (84), Expect = 0.022 Identities = 35/107 (32%), Positives = 47/107 (43%), Gaps = 6/107 (5%) Query: 21 SSTRAPSPTKRKDRSDEKSKD--RSKDKGATKES--SEKDRGRDKTRKRRSASSGSSSTR 76 S RA S K RS SK+ S+ + ++KES S+ R KR + S S Sbjct: 606 SRPRASSKEKAHSRSRTPSKEGNHSQSRTSSKESDPSQSTVPRSPDWKRSPTRTSSLSQN 665 Query: 77 SRSSSTSSSGSST--STGSSSGSSSSSASSRSGSSSTSRSSSSSSSS 121 S TSS ST S G + S A + + ++ SSSSSS Sbjct: 666 RTPSKTSSHSPSTFPSGGQTLSQDDSQADATTSKATLPGERSSSSSS 712 Score = 34.3 bits (77), Expect = 0.14 Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 18/135 (13%) Query: 17 NNKKSSTRAPSPTKR------KDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASS 70 + ++ +R+ SP K+ + S EK+ RS+ S E + + +T + S S Sbjct: 588 SEERDHSRSRSPNKQSGYSRPRASSKEKAHSRSR-----TPSKEGNHSQSRTSSKESDPS 642 Query: 71 GSSSTRS---RSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPS 127 S+ RS + S T +S S + S SS S ++ SG + S+ S + + + S Sbjct: 643 QSTVPRSPDWKRSPTRTSSLSQNRTPSKTSSHSPSTFPSGGQTLSQDDSQADA----TTS 698 Query: 128 RRRHDNRRRSRSKSK 142 + R S S SK Sbjct: 699 KATLPGERSSSSSSK 713 Score = 32.7 bits (73), Expect = 0.41 Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 7/104 (6%) Query: 74 STRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSST-------SRSSSSSSSSGSPSP 126 S+ RSS S S + + + + AS +S S+T ++ ++S +S SPS Sbjct: 2 SSPKRSSKPSMSLAPSGSSMPTADPKPPASLKSTKSATPNRSLVPTKPATSRNSVMSPSS 61 Query: 127 SRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTR 170 S+ + ++P R K R+PS T + ++ Sbjct: 62 SKSTKSTSTKRAPSNRPSSRSRVRSKARTPSRVSTDTRTSKASK 105 >gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 [Homo sapiens] Length = 568 Score = 68.9 bits (167), Expect = 5e-12 Identities = 48/109 (44%), Positives = 62/109 (56%), Gaps = 10/109 (9%) Query: 64 KRRSASSGSSSTRS--RSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSS 121 +R+ +G RS SSS+SSS SS+S+ SSS SSSSS+SS S SSS+S SSSSSSS+ Sbjct: 132 RRKLLKAGGDPNRSIHTSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSST 191 Query: 122 GSPSPSRRRHDNR-------RRSRSKSKPPKRD-EKERKRRSPSPKPTK 162 P + +++ R +S K P RD K K S PK K Sbjct: 192 SFSKPHKLMKEHKEKPSKDSREHKSAFKEPSRDHNKSSKESSKKPKENK 240 Score = 63.2 bits (152), Expect = 3e-10 Identities = 45/116 (38%), Positives = 58/116 (50%), Gaps = 22/116 (18%) Query: 67 SASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSP 126 S+SS SSS+ S SSS+SSS SS+S+ SSS SSSSS+SS S +S + PS Sbjct: 150 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKPHKLMKEHKEKPSK 209 Query: 127 SRRRH---------DNRRRSRSKSKPPKRDE-------------KERKRRSPSPKP 160 R H D+ + S+ SK PK ++ KE K S PKP Sbjct: 210 DSREHKSAFKEPSRDHNKSSKESSKKPKENKPLKEEKIVPKMAFKEPKPMSKEPKP 265 Score = 40.8 bits (94), Expect = 0.002 Identities = 28/78 (35%), Positives = 36/78 (46%) Query: 99 SSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSP 158 +SS+SS S SSS+S SSSSSSSS S S S + S S S + K K P Sbjct: 148 TSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKPHKLMKEHKEKP 207 Query: 159 KPTKVHIGRLTRNVTKDH 176 + ++DH Sbjct: 208 SKDSREHKSAFKEPSRDH 225 Score = 40.4 bits (93), Expect = 0.002 Identities = 38/140 (27%), Positives = 58/140 (41%), Gaps = 17/140 (12%) Query: 27 SPTKRKDRSDEKSKDRSKDKGATKE----------------SSEKDRGRDKTRKRRSASS 70 +P+KR SD + K K ++ E S++K + +DK+ + Sbjct: 280 APSKRPPISDSEELSAKKRKKSSSEALFKSFSSAPPLILTCSADKKQIKDKSHVKMGKVK 339 Query: 71 GSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRR 130 S T + ST + S + SS+S S S +SSSSSSS S +PS+ R Sbjct: 340 IESETSEKKKSTLPPFDDIVDPNDS-DVEENISSKSDSEQPSPASSSSSSSSSFTPSQTR 398 Query: 131 HDNRRRSRSKSKPPKRDEKE 150 RS K +E+E Sbjct: 399 QQGPLRSIMKDLHSDDNEEE 418 Score = 28.9 bits (63), Expect = 5.9 Identities = 39/159 (24%), Positives = 53/159 (33%), Gaps = 5/159 (3%) Query: 2 DLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDK-GATKESSEKDRGRD 60 +LS K+K E KS + AP ++ KD+S K G K SE + Sbjct: 292 ELSAKKRKK--SSSEALFKSFSSAPPLILTCSADKKQIKDKSHVKMGKVKIESETSEKKK 349 Query: 61 KTRKRRS--ASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSS 118 T S SS S S + SSS SSSS S++ RS Sbjct: 350 STLPPFDDIVDPNDSDVEENISSKSDSEQPSPASSSSSSSSSFTPSQTRQQGPLRSIMKD 409 Query: 119 SSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPS 157 S ++ +P R +R S S Sbjct: 410 LHSDDNEEESDEVEDNDNDSEMERPVNRGGSRSRRVSLS 448 >gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapiens] Length = 674 Score = 68.9 bits (167), Expect = 5e-12 Identities = 84/300 (28%), Positives = 117/300 (39%), Gaps = 31/300 (10%) Query: 15 KENNKKSSTRAPSPTKRKD---RSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSG 71 + ++ +SS+R+ S ++R RS ++ RS+ ++ S + R ++R RR + G Sbjct: 388 RTSSSRSSSRSSSRSRRGGGYYRSGRHARSRSRSWSRSRSRSRR-YSRSRSRGRRHSGGG 446 Query: 72 SSSTRSRSSSTSSSGS-STSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRR 130 S S S + G S S S S R G SSS S SS S SPSR R Sbjct: 447 SRDGHRYSRSPARRGGYGPRRRSRSRSHSGDRYRRGGRGLRHHSSSRSRSSWSLSPSRSR 506 Query: 131 HDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIF--------S 182 R RS S S R + +SPSP P + +LTR + E Sbjct: 507 SLTRSRSHSPSPSQSRSRSRSRSQSPSPSPAR---EKLTRPAASPAVGEKLKKTEPAAGK 563 Query: 183 TYGKIKMIDMPVERMHPHLSKGY-AYVEFENPDEAEKALKHMDGGQIDGQEITATAVLAP 241 G K P E++ + K + + EK ++ Q E+ A A Sbjct: 564 ETGAAKPKLTPQEKLKLRMQKALNRQFKADKKAAQEKMIQQEHERQEREDELRAMA---- 619 Query: 242 WPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSSS 301 R R W R + R+SRSP SP R S RRR RSRS S Sbjct: 620 ----RKIRMKERERREKEREEWER---QYSRQSRSP---SPRYSREYSSSRRRSRSRSRS 669 Score = 50.4 bits (119), Expect = 2e-06 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 38/296 (12%) Query: 7 KKKSLLGVKENNKKSSTRAPSPTK---RKDRSDEKSKDRSKDKGATKESSEKDR------ 57 ++K L G ++ + S R SPT ++ S+ S+ RS+ + T EK Sbjct: 275 REKRLRG-RKISPPSYARRDSPTYDPYKRSPSESSSESRSRSRSPTPGREEKITFITSFG 333 Query: 58 GRDKTRKRRSASSGSS--STRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSS 115 G D+ +A++ +S +T + G + +S+ SSS+SS S +S TS S Sbjct: 334 GSDEEAAAAAAAAAASGVTTGKPPAPPQPGGPAPGRNASARRRSSSSSSSSSASRTSSSR 393 Query: 116 SSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKD 175 SSS SS + + R +RS+S+ R +R S S + H G +R+ + Sbjct: 394 SSSRSSSRSRRGGGYYRSGRHARSRSRSWSRSRSRSRRYSRSRSRGRRHSGGGSRDGHR- 452 Query: 176 HIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITA 235 +S + P R G Y + L+H ++ Sbjct: 453 -----YSRSPARRGGYGPRRRSRSRSHSGDRY------RRGGRGLRHH----------SS 491 Query: 236 TAVLAPWPRPPPRRFSPPR-RMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSP 290 + + W P R S R R P P RS R R +S SP SP R + P Sbjct: 492 SRSRSSWSLSPSRSRSLTRSRSHSPSPSQSRSRSRSRSQSPSP---SPAREKLTRP 544 Score = 46.2 bits (108), Expect = 4e-05 Identities = 64/259 (24%), Positives = 89/259 (34%), Gaps = 50/259 (19%) Query: 65 RRSASSGSSSTRSRSSSTSSSGSS-----TSTGSSSGSSSSSASSRSGSSSTSRSSSSSS 119 +RS S SS +RSRS S + TS G S ++++A++ + S T+ + Sbjct: 301 KRSPSESSSESRSRSRSPTPGREEKITFITSFGGSDEEAAAAAAAAAASGVTTGKPPAPP 360 Query: 120 SSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIME 179 G P+P R RRRS S S R S G R+ H Sbjct: 361 QPGGPAPGRNA-SARRRSSSSSSSSSASRTSSSRSSSRSSSRSRRGGGYYRSGR--HARS 417 Query: 180 IFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVL 239 ++ + + R + +H GG DG Sbjct: 418 RSRSWSRSRSRSRRYSRSR------------------SRGRRHSGGGSRDGHR------- 452 Query: 240 APWPRPPPRR--FSPPRRMLPPP---PMWRRSPPRMRRRSRS----------PRRRSPVR 284 + R P RR + P RR +RR +R S S R RS R Sbjct: 453 --YSRSPARRGGYGPRRRSRSRSHSGDRYRRGGRGLRHHSSSRSRSSWSLSPSRSRSLTR 510 Query: 285 RRSRSPGRRRHRSRSSSNS 303 RS SP + RSRS S S Sbjct: 511 SRSHSPSPSQSRSRSRSRS 529 Score = 45.1 bits (105), Expect = 8e-05 Identities = 78/332 (23%), Positives = 110/332 (33%), Gaps = 76/332 (22%) Query: 14 VKENNKKSST--RAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKR------ 65 V + NK+++T A R R D++ + K A +E GR R+R Sbjct: 218 VADLNKQATTYGMADGDFVRMLRKDKEEAEAIKHAKALEEEKAMYSGRRSRRQRREFREK 277 Query: 66 ------------------------RSASSGSSSTRSRSSSTSSSGSS-----TSTGSSSG 96 RS S SS +RSRS S + TS G S Sbjct: 278 RLRGRKISPPSYARRDSPTYDPYKRSPSESSSESRSRSRSPTPGREEKITFITSFGGSDE 337 Query: 97 SSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSP 156 ++++A++ + S T+ + G P+P R RRRS S S R S Sbjct: 338 EAAAAAAAAAASGVTTGKPPAPPQPGGPAPGRNA-SARRRSSSSSSSSSASRTSSSRSSS 396 Query: 157 SPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEA 216 G R + H ++ + + R Sbjct: 397 RSSSRSRRGGGYYR--SGRHARSRSRSWSRSRSRSRRYSR------------------SR 436 Query: 217 EKALKHMDGGQIDGQEITATAVLAPWPRPPPRR--FSPPRRMLPPPPMWRRSPPRMRRRS 274 + +H GG DG + R P RR + P RR S R RR Sbjct: 437 SRGRRHSGGGSRDGHR---------YSRSPARRGGYGPRRRSRSR----SHSGDRYRRGG 483 Query: 275 RSPRRRSPVRRRSR---SPGRRRHRSRSSSNS 303 R R S R RS SP R R +RS S+S Sbjct: 484 RGLRHHSSSRSRSSWSLSPSRSRSLTRSRSHS 515 Score = 30.4 bits (67), Expect = 2.0 Identities = 16/32 (50%), Positives = 19/32 (59%) Query: 113 RSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPP 144 R S S S SP SR +RRRSRS+S+ P Sbjct: 639 RQYSRQSRSPSPRYSREYSSSRRRSRSRSRSP 670 >gi|15055543 splicing factor, arginine/serine-rich 2B [Homo sapiens] Length = 282 Score = 68.6 bits (166), Expect = 7e-12 Identities = 49/141 (34%), Positives = 67/141 (47%), Gaps = 4/141 (2%) Query: 165 IGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMD 224 + LT + D + +F YG++ + +P E H +G+A+V F + +A+ A MD Sbjct: 18 VDNLTYRTSPDSLRRVFEKYGRVGDVYIPREP-HTKAPRGFAFVRFHDRRDAQDAEAAMD 76 Query: 225 GGQIDGQEITATAVLAPWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVR 284 G ++DG+E+ P R PR RRS RRSRSPRRR R Sbjct: 77 GAELDGRELRVQVARYGRRDLPRSRQGEPRGRSRGGGYGRRS-RSYGRRSRSPRRRH--R 133 Query: 285 RRSRSPGRRRHRSRSSSNSSR 305 RSR P R RSRS SR Sbjct: 134 SRSRGPSCSRSRSRSRYRGSR 154 Score = 62.8 bits (151), Expect = 4e-10 Identities = 57/151 (37%), Positives = 77/151 (50%), Gaps = 16/151 (10%) Query: 20 KSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD---KTRKRRS-------AS 69 +S +R PS ++ + RS + S+ + S R ++R R S +S Sbjct: 133 RSRSRGPSCSRSRSRSRYRGSRYSRSPYSRSPYSRSRYSRSPYSRSRYRESRYGGSHYSS 192 Query: 70 SGSSSTR----SRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPS 125 SG S++R S S S SGSSTS+ S+S S SSSA RS SSS SRS S S SS Sbjct: 193 SGYSNSRYSRYHSSRSHSKSGSSTSSRSASTSKSSSAR-RSKSSSVSRSRSRSRSSSMTR 251 Query: 126 PSRRRHDNRRRSRSKSK-PPKRDEKERKRRS 155 R + +SRS+SK PPK E+E + S Sbjct: 252 SPPRVSKRKSKSRSRSKRPPKSPEEEGQMSS 282 Score = 59.3 bits (142), Expect = 4e-09 Identities = 56/162 (34%), Positives = 81/162 (50%), Gaps = 14/162 (8%) Query: 13 GVKENNKKSSTRAPSPTKR-----KDRSDEKSKDRSKDKGATKESSEKDRGR-DKTRKRR 66 G ++ R+ SP +R + S +S+ RS+ +G+ S R ++R R Sbjct: 113 GYGRRSRSYGRRSRSPRRRHRSRSRGPSCSRSRSRSRYRGSRYSRSPYSRSPYSRSRYSR 172 Query: 67 SASSGSSSTRSR--SSSTSSSGSSTST----GSSSGSSSSSASSRSGSSSTSRSSSSSSS 120 S S S SR S SSSG S S SS S S +S+ S S+STS+SSS+ S Sbjct: 173 SPYSRSRYRESRYGGSHYSSSGYSNSRYSRYHSSRSHSKSGSSTSSRSASTSKSSSARRS 232 Query: 121 SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTK 162 S S SR R +R S ++S PP+ +++ K RS S +P K Sbjct: 233 KSS-SVSRSRSRSRSSSMTRS-PPRVSKRKSKSRSRSKRPPK 272 Score = 31.2 bits (69), Expect = 1.2 Identities = 63/258 (24%), Positives = 83/258 (32%), Gaps = 47/258 (18%) Query: 33 DRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTG 92 DR D + + + D GA + E + +R S R RS S S G Sbjct: 64 DRRDAQDAEAAMD-GAELDGRELRVQVARYGRRDLPRSRQGEPRGRSRGGGYGRRSRSYG 122 Query: 93 SSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERK 152 S S SRS S SRS S S GS R SRS P R R Sbjct: 123 RRSRSPRRRHRSRSRGPSCSRSRSRSRYRGS-----------RYSRS---PYSRSPYSRS 168 Query: 153 RRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFEN 212 R S SP Y + + + H + S GY+ + Sbjct: 169 RYSRSP-------------------------YSRSRYRESRYGGSH-YSSSGYSNSRY-- 200 Query: 213 PDEAEKALKHMDGGQIDGQEITATAVLAPWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRR 272 + H G +T+ + R S R M RSPPR+ + Sbjct: 201 -SRYHSSRSHSKSGSSTSSRSASTSKSSSARRSKSSSVSRSRSRSRSSSM-TRSPPRVSK 258 Query: 273 RSRSPRRRSPVRRRSRSP 290 R R RS +R +SP Sbjct: 259 RKSKSRSRS--KRPPKSP 274 >gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo sapiens] Length = 434 Score = 68.6 bits (166), Expect = 7e-12 Identities = 62/175 (35%), Positives = 78/175 (44%), Gaps = 20/175 (11%) Query: 2 DLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKS-KDRSKDKGATK-ESSEKDRGR 59 D G K +S KE + S S +K +S+E + K+ S DKG + SSE R Sbjct: 55 DNEGRKHRSRSRSKEGRRHESKDKSS---KKHKSEEHNDKEHSSDKGRERLNSSENGEDR 111 Query: 60 DKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGS----SSTSRSS 115 K RK R +S G S +RSRS S S S SRS S S SRS Sbjct: 112 HK-RKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSR 170 Query: 116 SSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKER----------KRRSPSPKP 160 S S SR RH +R RSRS+++ RD K+R R+PSP P Sbjct: 171 ERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPP 225 Score = 58.2 bits (139), Expect = 9e-09 Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 11/169 (6%) Query: 15 KENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSS- 73 K +N+ R+ S +K R + SKD+S K ++E ++K+ DK R+R ++S Sbjct: 53 KSDNEGRKHRSRSRSKEGRRHE--SKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGED 110 Query: 74 --------STRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPS 125 S+R RS S S S S S + SR S SRS S Sbjct: 111 RHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSR 170 Query: 126 PSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTK 174 +RR +R RSRS+ + R + RS K R +R++++ Sbjct: 171 ERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSR 219 Score = 57.8 bits (138), Expect = 1e-08 Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 3/158 (1%) Query: 15 KENNKKSSTRAPSPTKRKDRSDEKSKDRSKDK-GATKESSEKDRGRDKTRKRRSASSGSS 73 K + +S +R+ ++ D K + RS+ K G ES +K + K+ + S Sbjct: 37 KHHYSRSRSRSRERKRKSDNEGRKHRSRSRSKEGRRHESKDKSSKKHKSEEHNDKEHSSD 96 Query: 74 STRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDN 133 R R +S S +G SS + SRS S S S S S SR R + Sbjct: 97 KGRERLNS-SENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKS 155 Query: 134 RRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRN 171 R RSR + K R +ERKRR S ++ TR+ Sbjct: 156 RSRSRERKKSRSR-SRERKRRIRSRSRSRSRHRHRTRS 192 Score = 53.9 bits (128), Expect = 2e-07 Identities = 51/166 (30%), Positives = 70/166 (42%), Gaps = 29/166 (17%) Query: 25 APSPTKRKDRSDEK-SKDRSKDKG---------ATKESSEKDRGRDKTRKRRSASSGSSS 74 A S T+R + EK S DR K K A+K + R R + RKR+S + G Sbjct: 2 AASDTERDGLAPEKTSPDRDKKKEQSEVSVSPRASKHHYSRSRSRSRERKRKSDNEGRKH 61 Query: 75 TRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSG------------ 122 RSRS S + SS S + + SS R +SS +G Sbjct: 62 -RSRSRSKEGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSS 120 Query: 123 -----SPSPSR-RRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTK 162 S S SR RRH +R R R KS+ R+ K+ + RS K ++ Sbjct: 121 RGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSR 166 Score = 47.4 bits (111), Expect = 2e-05 Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 10/143 (6%) Query: 15 KENNKKSSTRAPSPTKR---KDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSG 71 K + +S +R+ S +R + R +KS+ RS+++ +K R R + RK+ + S Sbjct: 118 KSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRER-------KKSRSRSRERKKSRSRSR 170 Query: 72 SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRH 131 R RS S S S T S S + S S + R S S S + SP P R R+ Sbjct: 171 ERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRN 230 Query: 132 DNRRRSRSKSKPPKRDEKERKRR 154 + ++ +R +K +++R Sbjct: 231 TAMDAQEALARRLERAKKLQEQR 253 Score = 45.1 bits (105), Expect = 8e-05 Identities = 57/211 (27%), Positives = 80/211 (37%), Gaps = 22/211 (10%) Query: 99 SSSASSRSG----SSSTSRSSSSSSSSGSPSP-SRRRHDNRRRSRSKSKPPKRDEKERKR 153 ++S + R G +S R S S SP + + H +R RSRS+ + K D + RK Sbjct: 2 AASDTERDGLAPEKTSPDRDKKKEQSEVSVSPRASKHHYSRSRSRSRERKRKSDNEGRKH 61 Query: 154 RSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENP 213 RS S GR R+ +KD K E S + Sbjct: 62 RSRSRSKE----GR--RHESKD----------KSSKKHKSEEHNDKEHSSDKGRERLNSS 105 Query: 214 DEAEKALKHMDGGQIDGQEITATAVLAPWPRPPPRRFSPPR-RMLPPPPMWRRSPPRMRR 272 + E K + G+ + + R R R R RS R + Sbjct: 106 ENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKS 165 Query: 273 RSRSPRRRSPVRRRSRSPGRRRHRSRSSSNS 303 RSRS R+ +R RSRS R RHR+RS S + Sbjct: 166 RSRSRERKRRIRSRSRSRSRHRHRTRSRSRT 196 Score = 34.7 bits (78), Expect = 0.11 Identities = 19/41 (46%), Positives = 23/41 (56%) Query: 265 RSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSSSNSSR 305 RS R R R R R RS R++SRS R R +SRS S + Sbjct: 123 RSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERK 163 Score = 28.9 bits (63), Expect = 5.9 Identities = 19/59 (32%), Positives = 23/59 (38%) Query: 247 PRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSSSNSSR 305 P + SP R SP + R RS R+R R+HRSRS S R Sbjct: 13 PEKTSPDRDKKKEQSEVSVSPRASKHHYSRSRSRSRERKRKSDNEGRKHRSRSRSKEGR 71 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.305 0.119 0.330 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,844,294 Number of Sequences: 37866 Number of extensions: 856470 Number of successful extensions: 43621 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 1416 Number of HSP's successfully gapped in prelim test: 1181 Number of HSP's that attempted gapping in prelim test: 11828 Number of HSP's gapped (non-prelim): 17583 length of query: 305 length of database: 18,247,518 effective HSP length: 102 effective length of query: 203 effective length of database: 14,385,186 effective search space: 2920192758 effective search space used: 2920192758 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.6 bits) S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.