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Search of human proteins with 18152775
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|18152775 beta-1,3-glucuronyltransferase 2 [Homo sapiens]
(323 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|18152775 beta-1,3-glucuronyltransferase 2 [Homo sapiens] 661 0.0
gi|16905510 beta-1,3-glucuronyltransferase 1 [Homo sapiens] 296 2e-80
gi|77695914 beta-1,3-glucuronyltransferase 1 [Homo sapiens] 296 2e-80
gi|12408654 beta-1,3-glucuronyltransferase 3 [Homo sapiens] 248 7e-66
gi|27477113 sterol regulatory element-binding transcription fact... 32 0.76
gi|46275820 tetratricopeptide repeat domain 9B [Homo sapiens] 32 0.76
gi|56711322 ring finger protein 43 [Homo sapiens] 32 0.76
gi|4503615 even-skipped homeobox 1 [Homo sapiens] 32 1.00
gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens] 32 1.00
gi|239753475 PREDICTED: hypothetical protein [Homo sapiens] 31 1.3
gi|239748044 PREDICTED: hypothetical protein XP_002346500 [Homo ... 31 1.3
gi|239741935 PREDICTED: hypothetical protein XP_002342357 [Homo ... 31 1.3
gi|215820635 protein phosphatase 1, regulatory subunit 13 like [... 31 1.7
gi|63003907 protein phosphatase 1, regulatory subunit 13 like [H... 31 1.7
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 31 1.7
gi|164419758 bromodomain containing 2 [Homo sapiens] 30 2.2
gi|4826806 bromodomain containing 2 [Homo sapiens] 30 2.2
gi|157388908 hypothetical protein LOC54954 [Homo sapiens] 30 2.2
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 30 2.9
gi|108860690 chromosome 16 open reading frame 7 [Homo sapiens] 30 2.9
gi|239756385 PREDICTED: similar to hCG1991431 [Homo sapiens] 30 3.8
gi|55743092 aristaless-like homeobox 4 [Homo sapiens] 30 3.8
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 30 3.8
gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens] 29 4.9
gi|9945318 MAX binding protein [Homo sapiens] 29 6.5
gi|40807452 peroxisome proliferator-activated receptor gamma, co... 29 6.5
gi|117938768 GNAS complex locus alex [Homo sapiens] 28 8.4
gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo sap... 28 8.4
gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo sap... 28 8.4
gi|122891870 melanoma inhibitory activity family, member 3 [Homo... 28 8.4
>gi|18152775 beta-1,3-glucuronyltransferase 2 [Homo sapiens]
Length = 323
Score = 661 bits (1705), Expect = 0.0
Identities = 323/323 (100%), Positives = 323/323 (100%)
Query: 1 MKSALFTRFFILLPWILIVIIMLDVDTRRPVPPLTPRPYFSPYAVGRGGARLPLRRGGPA 60
MKSALFTRFFILLPWILIVIIMLDVDTRRPVPPLTPRPYFSPYAVGRGGARLPLRRGGPA
Sbjct: 1 MKSALFTRFFILLPWILIVIIMLDVDTRRPVPPLTPRPYFSPYAVGRGGARLPLRRGGPA 60
Query: 61 HGTQKRNQSRPQPQPEPQLPTIYAITPTYSRPVQKAELTRLANTFRQVAQLHWILVEDAA 120
HGTQKRNQSRPQPQPEPQLPTIYAITPTYSRPVQKAELTRLANTFRQVAQLHWILVEDAA
Sbjct: 61 HGTQKRNQSRPQPQPEPQLPTIYAITPTYSRPVQKAELTRLANTFRQVAQLHWILVEDAA 120
Query: 121 ARSELVSRFLARAGLPSTHLHVPTPRRYKRPGLPRATEQRNAGLAWLRQRHQHQRAQPGV 180
ARSELVSRFLARAGLPSTHLHVPTPRRYKRPGLPRATEQRNAGLAWLRQRHQHQRAQPGV
Sbjct: 121 ARSELVSRFLARAGLPSTHLHVPTPRRYKRPGLPRATEQRNAGLAWLRQRHQHQRAQPGV 180
Query: 181 LFFADDDNTYSLELFQEMRTTRKVSVWPVGLVGGRRYERPLVENGKVVGWYTGWRADRPF 240
LFFADDDNTYSLELFQEMRTTRKVSVWPVGLVGGRRYERPLVENGKVVGWYTGWRADRPF
Sbjct: 181 LFFADDDNTYSLELFQEMRTTRKVSVWPVGLVGGRRYERPLVENGKVVGWYTGWRADRPF 240
Query: 241 AIDMAGFAVSLQVILSNPKAVFKRRGSQPGMQESDFLKQITTVEELEPKANNCTKVLVWH 300
AIDMAGFAVSLQVILSNPKAVFKRRGSQPGMQESDFLKQITTVEELEPKANNCTKVLVWH
Sbjct: 241 AIDMAGFAVSLQVILSNPKAVFKRRGSQPGMQESDFLKQITTVEELEPKANNCTKVLVWH 300
Query: 301 TRTEKVNLANEPKYHLDTVKIEV 323
TRTEKVNLANEPKYHLDTVKIEV
Sbjct: 301 TRTEKVNLANEPKYHLDTVKIEV 323
>gi|16905510 beta-1,3-glucuronyltransferase 1 [Homo sapiens]
Length = 334
Score = 296 bits (758), Expect = 2e-80
Identities = 152/262 (58%), Positives = 183/262 (69%), Gaps = 8/262 (3%)
Query: 69 SRPQPQPEPQLPTIYAITPTYSRPVQKAELTRLANTFRQVAQLHWILVEDAAARSELVSR 128
+RP P + LPTI+ +TPTYSRPVQKAELTR+ANT V LHW++VEDA R+ L +R
Sbjct: 74 TRPPPWSDT-LPTIHVVTPTYSRPVQKAELTRMANTLLHVPNLHWLVVEDAPRRTPLTAR 132
Query: 129 FLARAGLPSTHLHVPTPRRYKR------PGLPRATEQRNAGLAWLRQRHQHQRAQPGVLF 182
L GL THLHV TPR YK P +PR T QRN L WLR+ +QPGV++
Sbjct: 133 LLRDTGLNYTHLHVETPRNYKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVY 192
Query: 183 FADDDNTYSLELFQEMRTTRKVSVWPVGLVGGRRYERPLVEN-GKVVGWYTGWRADRPFA 241
FADDDNTYSLELF+EMR+TR+VSVWPV VGG RYE P V GKVVGW T + RPFA
Sbjct: 193 FADDDNTYSLELFEEMRSTRRVSVWPVAFVGGLRYEAPRVNGAGKVVGWKTVFDPHRPFA 252
Query: 242 IDMAGFAVSLQVILSNPKAVFKRRGSQPGMQESDFLKQITTVEELEPKANNCTKVLVWHT 301
IDMAGFAV+L++IL +A FK RG + G QES L+++ T+ +LEPKA NCTK+LVWHT
Sbjct: 253 IDMAGFAVNLRLILQRSQAYFKLRGVKGGYQESSLLRELVTLNDLEPKAANCTKILVWHT 312
Query: 302 RTEKVNLANEPKYHLDTVKIEV 323
RTEK L NE K +E+
Sbjct: 313 RTEKPVLVNEGKKGFTDPSVEI 334
>gi|77695914 beta-1,3-glucuronyltransferase 1 [Homo sapiens]
Length = 334
Score = 296 bits (758), Expect = 2e-80
Identities = 152/262 (58%), Positives = 183/262 (69%), Gaps = 8/262 (3%)
Query: 69 SRPQPQPEPQLPTIYAITPTYSRPVQKAELTRLANTFRQVAQLHWILVEDAAARSELVSR 128
+RP P + LPTI+ +TPTYSRPVQKAELTR+ANT V LHW++VEDA R+ L +R
Sbjct: 74 TRPPPWSDT-LPTIHVVTPTYSRPVQKAELTRMANTLLHVPNLHWLVVEDAPRRTPLTAR 132
Query: 129 FLARAGLPSTHLHVPTPRRYKR------PGLPRATEQRNAGLAWLRQRHQHQRAQPGVLF 182
L GL THLHV TPR YK P +PR T QRN L WLR+ +QPGV++
Sbjct: 133 LLRDTGLNYTHLHVETPRNYKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVY 192
Query: 183 FADDDNTYSLELFQEMRTTRKVSVWPVGLVGGRRYERPLVEN-GKVVGWYTGWRADRPFA 241
FADDDNTYSLELF+EMR+TR+VSVWPV VGG RYE P V GKVVGW T + RPFA
Sbjct: 193 FADDDNTYSLELFEEMRSTRRVSVWPVAFVGGLRYEAPRVNGAGKVVGWKTVFDPHRPFA 252
Query: 242 IDMAGFAVSLQVILSNPKAVFKRRGSQPGMQESDFLKQITTVEELEPKANNCTKVLVWHT 301
IDMAGFAV+L++IL +A FK RG + G QES L+++ T+ +LEPKA NCTK+LVWHT
Sbjct: 253 IDMAGFAVNLRLILQRSQAYFKLRGVKGGYQESSLLRELVTLNDLEPKAANCTKILVWHT 312
Query: 302 RTEKVNLANEPKYHLDTVKIEV 323
RTEK L NE K +E+
Sbjct: 313 RTEKPVLVNEGKKGFTDPSVEI 334
>gi|12408654 beta-1,3-glucuronyltransferase 3 [Homo sapiens]
Length = 335
Score = 248 bits (632), Expect = 7e-66
Identities = 136/262 (51%), Positives = 168/262 (64%), Gaps = 16/262 (6%)
Query: 65 KRNQSRPQPQPEPQ-LPTIYAITPTYSRPVQKAELTRLANTFRQVAQLHWILVEDAAARS 123
+R P PEP+ LPTIY +TPTY+R VQKAEL RL+ T V +LHW+LVEDA +
Sbjct: 59 RRPPPAPAQPPEPEALPTIYVVTPTYARLVQKAELVRLSQTLSLVPRLHWLLVEDAEGPT 118
Query: 124 ELVSRFLARAGLPSTHLHVPTPR----RYKRPGL--PRATEQRNAGLAWLR--------Q 169
LVS LA +GL THL V TP+ R PG PR EQRN L WLR +
Sbjct: 119 PLVSGLLAASGLLFTHLVVLTPKAQRLREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGE 178
Query: 170 RHQHQRAQPGVLFFADDDNTYSLELFQEMRTTRKVSVWPVGLVGGRRYERPLVENGKVVG 229
+ GV++FADDDNTYS ELF+EMR TR VSVWPVGLVGG R+E P V++G+VVG
Sbjct: 179 KDPPPPGTQGVVYFADDDNTYSRELFEEMRWTRGVSVWPVGLVGGLRFEGPQVQDGRVVG 238
Query: 230 WYTGWRADRPFAIDMAGFAVSLQVILSNPKAVFKRRGSQPGMQESDFLKQITTVEELEPK 289
++T W RPF +DMAGFAV+L ++L P A F + G ES L + ++LEP+
Sbjct: 239 FHTAWEPSRPFPVDMAGFAVALPLLLDKPNAQFDSTAPR-GHLESSLLSHLVDPKDLEPR 297
Query: 290 ANNCTKVLVWHTRTEKVNLANE 311
A NCT+VLVWHTRTEK + E
Sbjct: 298 AANCTRVLVWHTRTEKPKMKQE 319
>gi|27477113 sterol regulatory element-binding transcription factor
2 [Homo sapiens]
Length = 1141
Score = 32.0 bits (71), Expect = 0.76
Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 12/85 (14%)
Query: 38 PYFSPYAVGRGGARLPLRRGGPAHGTQKRN----QSRPQPQPEPQL---PTIYAITPTYS 90
P FSP A L ++ + T R Q RPQPQP+PQ ITPT+S
Sbjct: 98 PSFSPSAASPQAPTLQVKVSPTSVPTTPRATPILQPRPQPQPQPQTQLQQQTVMITPTFS 157
Query: 91 -----RPVQKAELTRLANTFRQVAQ 110
R +Q+ + + A T QV Q
Sbjct: 158 TTPQTRIIQQPLIYQNAATSFQVLQ 182
>gi|46275820 tetratricopeptide repeat domain 9B [Homo sapiens]
Length = 239
Score = 32.0 bits (71), Expect = 0.76
Identities = 40/135 (29%), Positives = 54/135 (40%), Gaps = 28/135 (20%)
Query: 30 PVPPLTPRPYFSPYAVGRGGARLPLRRGGPAHGTQKRNQSRPQPQPEPQLPTIYAITPTY 89
P PP P P SP G G G HG+ +RP P PEP A+ +
Sbjct: 16 PEPPPRPPPALSPPGSGPG--------SGSRHGS-----ARPGPTPEPSGSLGAALDSSL 62
Query: 90 SRPVQ-KAELTRL--ANTFRQ-VAQLHWILVEDAAARSELVSRFLARAGLPSTHLHVPTP 145
V KAE R FR+ + + H L++ AA+ S GLP+ P P
Sbjct: 63 RAAVAFKAEGQRCYREKKFREAIGKYHRALLQLKAAQGARPS------GLPA-----PAP 111
Query: 146 RRYKRPGLPRATEQR 160
PG R +E++
Sbjct: 112 GPTSSPGPARLSEEQ 126
>gi|56711322 ring finger protein 43 [Homo sapiens]
Length = 783
Score = 32.0 bits (71), Expect = 0.76
Identities = 40/148 (27%), Positives = 58/148 (39%), Gaps = 33/148 (22%)
Query: 82 IYAITPTYSRPVQKAELTRLANTFRQVAQL----------HWILVEDAAARSELVSRFLA 131
I + P P K LT L F VA++ H + + +A+ L F++
Sbjct: 47 IIRVIPLKMDPTGKLNLT-LEGVFAGVAEITPAEGKLMQSHPLYLCNASDDDNLEPGFIS 105
Query: 132 RAGLPSTHLHVPTPRRYKRPGLPRATEQRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYS 191
L S PRR RP L A++ R AG +R VLF +D +
Sbjct: 106 IVKLES-------PRRAPRPCLSLASKARMAG----------ERGASAVLFDITEDRAAA 148
Query: 192 LELFQEMRTTRKVSVWPVGLVGGRRYER 219
+L Q + T WPV L+ G E+
Sbjct: 149 EQLQQPLGLT-----WPVVLIWGNDAEK 171
>gi|4503615 even-skipped homeobox 1 [Homo sapiens]
Length = 407
Score = 31.6 bits (70), Expect = 1.00
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 5/66 (7%)
Query: 30 PVPPLTPRPYFSPYAVGRGGARLPLRRGGPAHGTQKRNQS---RPQPQPEPQLPTIYAIT 86
P P P PY+SP VG G A P G+ + + QP P P+L +
Sbjct: 272 PFPSHLPLPYYSP--VGLGAASAASAAASPFSGSLRPLDTFRVLSQPYPRPELLCAFRHP 329
Query: 87 PTYSRP 92
P Y P
Sbjct: 330 PLYPGP 335
>gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens]
Length = 818
Score = 31.6 bits (70), Expect = 1.00
Identities = 33/126 (26%), Positives = 49/126 (38%), Gaps = 23/126 (18%)
Query: 30 PVPPLTPRPYFSPYAVGRG--------GARLPLRRGGPAHGTQKRNQSRPQPQPEPQLPT 81
P PP TP PY Y G A PL P+ T ++SRP P+P Q PT
Sbjct: 681 PTPPSTPSPYGLSYPQGYSLASGQLSPAAAPPL--ASPSVFTSTLSKSRPTPKPR-QRPT 737
Query: 82 IYAITPTYSRPVQKAELTRLANTFRQVAQLHWILVEDAAARSELVSRFLARAGLPSTHLH 141
+ P + L+ + Q + + D + E +S L +PS H+
Sbjct: 738 L---------PPPQPPTVNLSASSPQSTEAPML---DGMSPGESMSTDLVHFDIPSIHIE 785
Query: 142 VPTPRR 147
+ + R
Sbjct: 786 LGSTLR 791
>gi|239753475 PREDICTED: hypothetical protein [Homo sapiens]
Length = 721
Score = 31.2 bits (69), Expect = 1.3
Identities = 40/147 (27%), Positives = 52/147 (35%), Gaps = 19/147 (12%)
Query: 52 LPLRRGG--PAHG---TQKRNQSRPQPQPEPQLPTIYAI-TPTYSRPVQKAE-------- 97
LP RG P +G TQK +P P P + +I TP PV
Sbjct: 195 LPPSRGSWKPLNGSNQTQKHEAQKPPKHTAPPGPDLTSIRTPASEPPVTGCHPPSGGCGW 254
Query: 98 LTRLANTFRQVAQLHWILVEDAAARSELVSRFLARAGLPSTHLHVPTPRRYKRPGLPRAT 157
++RL T+ +VA W L R V L +G P H PT P+A
Sbjct: 255 ISRLPRTWTRVAASRWGLHMGWGQRPSTVLLPLPSSGRPCLHHLSPTSSILP----PQAP 310
Query: 158 EQRNAGLAWLRQRHQHQ-RAQPGVLFF 183
G W + R PG + F
Sbjct: 311 GGAPGGHTWAQARWPRPGHTDPGCITF 337
>gi|239748044 PREDICTED: hypothetical protein XP_002346500 [Homo
sapiens]
Length = 721
Score = 31.2 bits (69), Expect = 1.3
Identities = 40/147 (27%), Positives = 52/147 (35%), Gaps = 19/147 (12%)
Query: 52 LPLRRGG--PAHG---TQKRNQSRPQPQPEPQLPTIYAI-TPTYSRPVQKAE-------- 97
LP RG P +G TQK +P P P + +I TP PV
Sbjct: 195 LPPSRGSWKPLNGSNQTQKHEAQKPPKHTAPPGPDLTSIRTPASEPPVTGCHPPSGGCGW 254
Query: 98 LTRLANTFRQVAQLHWILVEDAAARSELVSRFLARAGLPSTHLHVPTPRRYKRPGLPRAT 157
++RL T+ +VA W L R V L +G P H PT P+A
Sbjct: 255 ISRLPRTWTRVAASRWGLHMGWGQRPSTVLLPLPSSGRPCLHHLSPTSSILP----PQAP 310
Query: 158 EQRNAGLAWLRQRHQHQ-RAQPGVLFF 183
G W + R PG + F
Sbjct: 311 GGAPGGHTWAQARWPRPGHTDPGCITF 337
>gi|239741935 PREDICTED: hypothetical protein XP_002342357 [Homo
sapiens]
Length = 721
Score = 31.2 bits (69), Expect = 1.3
Identities = 40/147 (27%), Positives = 52/147 (35%), Gaps = 19/147 (12%)
Query: 52 LPLRRGG--PAHG---TQKRNQSRPQPQPEPQLPTIYAI-TPTYSRPVQKAE-------- 97
LP RG P +G TQK +P P P + +I TP PV
Sbjct: 195 LPPSRGSWKPLNGSNQTQKHEAQKPPKHTAPPGPDLTSIRTPASEPPVTGCHPPSGGCGW 254
Query: 98 LTRLANTFRQVAQLHWILVEDAAARSELVSRFLARAGLPSTHLHVPTPRRYKRPGLPRAT 157
++RL T+ +VA W L R V L +G P H PT P+A
Sbjct: 255 ISRLPRTWTRVAASRWGLHMGWGQRPSTVLLPLPSSGRPCLHHLSPTSSILP----PQAP 310
Query: 158 EQRNAGLAWLRQRHQHQ-RAQPGVLFF 183
G W + R PG + F
Sbjct: 311 GGAPGGHTWAQARWPRPGHTDPGCITF 337
>gi|215820635 protein phosphatase 1, regulatory subunit 13 like
[Homo sapiens]
Length = 828
Score = 30.8 bits (68), Expect = 1.7
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 22/76 (28%)
Query: 27 TRRPVPPLTPRPYFSP-----------------YAVGRGGARLP-----LRRGGPAHGTQ 64
+R P+PP +P+P +P + G A LP R P Q
Sbjct: 350 SRIPMPPSSPQPRGAPRQRPIPLSMIFKLQNAFWEHGASRAMLPGSPLFTRAPPPKLQPQ 409
Query: 65 KRNQSRPQPQPEPQLP 80
+ Q +PQ QP+PQLP
Sbjct: 410 PQPQPQPQSQPQPQLP 425
Score = 29.3 bits (64), Expect = 4.9
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 17/55 (30%)
Query: 27 TRRPVPPLTPRPYFSPYAVGRGGARLPLRRGGPAHGTQKRNQSRPQPQPEPQLPT 81
TR P P L P+P P + +LP PQPQ +PQ PT
Sbjct: 399 TRAPPPKLQPQPQPQPQPQSQPQPQLP-----------------PQPQTQPQTPT 436
>gi|63003907 protein phosphatase 1, regulatory subunit 13 like [Homo
sapiens]
Length = 828
Score = 30.8 bits (68), Expect = 1.7
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 22/76 (28%)
Query: 27 TRRPVPPLTPRPYFSP-----------------YAVGRGGARLP-----LRRGGPAHGTQ 64
+R P+PP +P+P +P + G A LP R P Q
Sbjct: 350 SRIPMPPSSPQPRGAPRQRPIPLSMIFKLQNAFWEHGASRAMLPGSPLFTRAPPPKLQPQ 409
Query: 65 KRNQSRPQPQPEPQLP 80
+ Q +PQ QP+PQLP
Sbjct: 410 PQPQPQPQSQPQPQLP 425
Score = 29.3 bits (64), Expect = 4.9
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 17/55 (30%)
Query: 27 TRRPVPPLTPRPYFSPYAVGRGGARLPLRRGGPAHGTQKRNQSRPQPQPEPQLPT 81
TR P P L P+P P + +LP PQPQ +PQ PT
Sbjct: 399 TRAPPPKLQPQPQPQPQPQSQPQPQLP-----------------PQPQTQPQTPT 436
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 30.8 bits (68), Expect = 1.7
Identities = 42/141 (29%), Positives = 54/141 (38%), Gaps = 17/141 (12%)
Query: 32 PPLTPRPYFSPYAVGRGGARLPLRRGGPAHGTQKRNQSRPQPQPEPQLPTIYAITPTYSR 91
PP PR P AV LP PA Q++ PQPQP P+ + A +R
Sbjct: 192 PPAGPRRA-PPPAVAAREPPLPPPPQPPAP-PQQQQPPPPQPQPPPEGGAVRA--GGAAR 247
Query: 92 PVQKAELTRL------ANTFRQVAQLHWILVEDAAARSELVSRFLARAGLP-------ST 138
PV E+ R A ++ +L E+AAAR L L LP +
Sbjct: 248 PVSLREVVRYLGGSGGAGGRLTRGRVQGLLEEEAAARGRLERTRLGALALPRGDRPGRAP 307
Query: 139 HLHVPTPRRYKRPGLPRATEQ 159
P R KR G R E+
Sbjct: 308 PAASARPSRSKRGGEERVLEK 328
>gi|164419758 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 30.4 bits (67), Expect = 2.2
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Query: 24 DVDTRRPVPPLTPRPYFSPYAVGRGGARLPLRRG--GPAHGTQKRNQSRPQPQPEPQLPT 81
D D + P P P+P S A G GG L GP+ G+ + + P LPT
Sbjct: 570 DEDDKGPRAPRPPQPKKSKKASGSGGGSAALGPSGFGPSGGSGTKLPKKATKTAPPALPT 629
Query: 82 IY-AITPTYSRPVQKAELTRLA 102
Y + SRP+ E +L+
Sbjct: 630 GYDSEEEEESRPMSYDEKRQLS 651
>gi|4826806 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 30.4 bits (67), Expect = 2.2
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Query: 24 DVDTRRPVPPLTPRPYFSPYAVGRGGARLPLRRG--GPAHGTQKRNQSRPQPQPEPQLPT 81
D D + P P P+P S A G GG L GP+ G+ + + P LPT
Sbjct: 570 DEDDKGPRAPRPPQPKKSKKASGSGGGSAALGPSGFGPSGGSGTKLPKKATKTAPPALPT 629
Query: 82 IY-AITPTYSRPVQKAELTRLA 102
Y + SRP+ E +L+
Sbjct: 630 GYDSEEEEESRPMSYDEKRQLS 651
>gi|157388908 hypothetical protein LOC54954 [Homo sapiens]
Length = 1096
Score = 30.4 bits (67), Expect = 2.2
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 10/57 (17%)
Query: 30 PVPPLTPRPYFSPYAVGRGGARLPLRRGGPAHGTQKRNQSRP------QPQPEPQLP 80
P+ P P Y+ G G P+R PAH Q++P P P PQLP
Sbjct: 62 PLQPPLPPAALGAYSGGAG----PIRHHHPAHHFHHHGQAQPGLHPPLPPPPPPQLP 114
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 30.0 bits (66), Expect = 2.9
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
Query: 31 VPPLTPRPYFSPYAVGRGGARLPLRRGGPAHGTQKRNQSRPQPQPEPQLP 80
+PP P P P A G G P G P G S P P P +P
Sbjct: 257 IPPAMPPPPMPPGAAGHG----PPSAGTPGAGHPGHGHSHPHPFPPGGMP 302
>gi|108860690 chromosome 16 open reading frame 7 [Homo sapiens]
Length = 631
Score = 30.0 bits (66), Expect = 2.9
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Query: 30 PVPPLTPRPYFSPYAVGRGGARLPLRRGG-----PAHGTQKRNQSRPQPQPEPQL 79
P PPL P P SP +G + LP + GT +R QPEPQL
Sbjct: 351 PTPPLQPGPVGSPSPLGDTASGLPDKDSSFEDLEQFLGTSERQGRGRGVQPEPQL 405
>gi|239756385 PREDICTED: similar to hCG1991431 [Homo sapiens]
Length = 232
Score = 29.6 bits (65), Expect = 3.8
Identities = 10/20 (50%), Positives = 15/20 (75%)
Query: 73 PQPEPQLPTIYAITPTYSRP 92
P+P P LPT+Y ++ T+S P
Sbjct: 52 PRPSPTLPTLYPVSSTHSSP 71
>gi|55743092 aristaless-like homeobox 4 [Homo sapiens]
Length = 411
Score = 29.6 bits (65), Expect = 3.8
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 43 YAVGRGGARLPLRRGGPAHGTQKRNQ---SRPQPQPEPQ 78
Y G+ PL G A G+ + Q S PQPQP PQ
Sbjct: 66 YGAGQQDLATPLESGAGARGSFNKFQPQPSTPQPQPPPQ 104
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 29.6 bits (65), Expect = 3.8
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Query: 32 PPLTPRPYFSPYAVGRGGARLPLRRGGPAHGTQKRNQSRPQPQPEPQLPTIYAITPTY 89
PP P P P A+ G P+ P Q+ + P P QLPT + PT+
Sbjct: 4286 PPRLPAP---PGALSTGPVLGPVHPTPPPSSPQEPKRPSQLPSPSSQLPTEAQLPPTH 4340
>gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 653
Score = 29.3 bits (64), Expect = 4.9
Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 20/83 (24%)
Query: 30 PVPPLTPR--------PYFSPYAVGRGGAR--LPLRRGGPAHGTQKRNQSRP-------- 71
P P L PR P +P G G R L LR G + +++RP
Sbjct: 506 PGPVLAPRCPGNGVLLPVLAPQCPGNGVPRPVLALRCPPGGQGPSRHHKARPSSSQTKPA 565
Query: 72 -QPQPEPQLP-TIYAITPTYSRP 92
QPQ +PQ P T+ P Y P
Sbjct: 566 PQPQSKPQAPSTLPTSNPIYPYP 588
>gi|9945318 MAX binding protein [Homo sapiens]
Length = 582
Score = 28.9 bits (63), Expect = 6.5
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 33 PLTPRPYFSPYAVGRGGARLPLRRGGPAHGTQKRNQSRPQPQPEPQLP 80
PL P P+ P++V A LP+++ P T P P P P P
Sbjct: 377 PLPPHPHPHPHSVALPPAHLPVQQQQPQQKT-----PLPAPPPPPAAP 419
>gi|40807452 peroxisome proliferator-activated receptor gamma,
coactivator-related 1 [Homo sapiens]
Length = 1664
Score = 28.9 bits (63), Expect = 6.5
Identities = 33/121 (27%), Positives = 50/121 (41%), Gaps = 17/121 (14%)
Query: 53 PLRRGGPAHGTQKRNQSRPQPQPEPQLPTIYAITPTY--SRPVQKAELTRLANTFRQVAQ 110
PL G P HG + ++ + +P P P P + S VQ ++ LA
Sbjct: 1037 PLSLGLPGHGAPQTEPTKVEVKPVPASP-----HPKHKVSALVQSPQMKALA-----CVS 1086
Query: 111 LHWILVEDAAAR----SELVSRFLARAGLPSTHLHVPTPRRYKRPGLPRATEQRNAGLAW 166
+ VE+ A+ +R + LP+T VPTPR+ P LP R L++
Sbjct: 1087 AEGVTVEEPASERLKPETQETRPREKPPLPATKA-VPTPRQSTVPKLPAVHPARLRKLSF 1145
Query: 167 L 167
L
Sbjct: 1146 L 1146
>gi|117938768 GNAS complex locus alex [Homo sapiens]
Length = 626
Score = 28.5 bits (62), Expect = 8.4
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 13/58 (22%)
Query: 27 TRRPVP----PLTPRPYFSPYAVGRGGARLP-----LRRGGPAHGTQKRNQSRPQPQP 75
T +P+P PLTP+P P GR RLP LR G P ++ Q P PQP
Sbjct: 386 TPQPIPTPGRPLTPQPIQMP---GRP-LRLPPPLRLLRPGQPMSPQLRQTQGLPLPQP 439
>gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo
sapiens]
Length = 1038
Score = 28.5 bits (62), Expect = 8.4
Identities = 40/162 (24%), Positives = 59/162 (36%), Gaps = 32/162 (19%)
Query: 25 VDTRRPVPPLTPRPY--FSPYAVGR----------GGARLPLRRGGPAHGTQKRNQ---- 68
V R P+PP RP+ SP G R+P R G++ +
Sbjct: 739 VPPRVPIPPRPTRPHVQLSPAPPGEEETSQWPGPASPPRVPPREPLSPQGSRTPSPLVPP 798
Query: 69 -SRPQP-----QPEPQLPTI--YAITPTYSRP-VQKAELTR-------LANTFRQVAQLH 112
S P P P +PT +A P Y+ P V +A R + ++V+ H
Sbjct: 799 GSSPLPPRLSSSPGKTMPTTQSFASDPKYATPQVIQAPGPRAGPCILPIVRDGKKVSSTH 858
Query: 113 WILVEDAAARSELVSRFLARAGLPSTHLHVPTPRRYKRPGLP 154
+ L+ + + E RFL A P +P P P P
Sbjct: 859 YYLLPERPSYLERYQRFLREAQSPEEPTPLPVPLLLPPPSTP 900
>gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo
sapiens]
Length = 1086
Score = 28.5 bits (62), Expect = 8.4
Identities = 40/162 (24%), Positives = 59/162 (36%), Gaps = 32/162 (19%)
Query: 25 VDTRRPVPPLTPRPY--FSPYAVGR----------GGARLPLRRGGPAHGTQKRNQ---- 68
V R P+PP RP+ SP G R+P R G++ +
Sbjct: 817 VPPRVPIPPRPTRPHVQLSPAPPGEEETSQWPGPASPPRVPPREPLSPQGSRTPSPLVPP 876
Query: 69 -SRPQP-----QPEPQLPTI--YAITPTYSRP-VQKAELTR-------LANTFRQVAQLH 112
S P P P +PT +A P Y+ P V +A R + ++V+ H
Sbjct: 877 GSSPLPPRLSSSPGKTMPTTQSFASDPKYATPQVIQAPGPRAGPCILPIVRDGKKVSSTH 936
Query: 113 WILVEDAAARSELVSRFLARAGLPSTHLHVPTPRRYKRPGLP 154
+ L+ + + E RFL A P +P P P P
Sbjct: 937 YYLLPERPSYLERYQRFLREAQSPEEPTPLPVPLLLPPPSTP 978
>gi|122891870 melanoma inhibitory activity family, member 3 [Homo
sapiens]
Length = 1907
Score = 28.5 bits (62), Expect = 8.4
Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 20/63 (31%)
Query: 29 RPVPPLTPRPYFSPYAVGRGGARLPLRRGGPAHGTQKRNQSRPQPQPEPQLPTIYAITPT 88
RP+ L PR YF P G RLP P HG PQ P P + + P+
Sbjct: 1843 RPLGSLGPREYFIP------GTRLP----PPTHG----------PQEYPPPPAVRDLLPS 1882
Query: 89 YSR 91
SR
Sbjct: 1883 GSR 1885
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.137 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,670,033
Number of Sequences: 37866
Number of extensions: 702205
Number of successful extensions: 2914
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 2856
Number of HSP's gapped (non-prelim): 62
length of query: 323
length of database: 18,247,518
effective HSP length: 102
effective length of query: 221
effective length of database: 14,385,186
effective search space: 3179126106
effective search space used: 3179126106
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.