Guide to the Human Genome
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Name: ACER3 Sequence: fasta or formatted (267aa) NCBI GI: 170932467
Description:

phytoceramidase, alkaline

Referenced in:

Sphingomyelin, Ceramides, and Glycolipids

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.0          8           2
 C cysteine            2.6          7           2
 D aspartate           1.9          5           1
 E glutamate           4.1         11           2
 F phenylalanine       7.5         20           1
 G glycine             5.6         15           1
 H histidine           2.6          7           1
 I isoleucine          8.2         22           2
 K lysine              4.1         11           2
 L leucine            13.1         35           2
 M methionine          3.7         10           1
 N asparagine          3.0          8           1
 P proline             4.5         12           2
 Q glutamine           1.5          4           1
 R arginine            4.1         11           1
 S serine              5.2         14           1
 T threonine           6.7         18           2
 V valine              7.5         20           2
 W tryptophan          4.1         11           2
 Y tyrosine            6.7         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phytoceramidase, alkaline 
ACER2                 0.094   alkaline ceramidase 2 
ACER1                 0.072   alkaline ceramidase 1 
RNF121                0.015   ring finger protein 121 
CACNA1C               0.011   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.011   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.011   calcium channel, voltage-dependent, L type, alpha 1...
ITPR3                 0.011   inositol 1,4,5-triphosphate receptor, type 3 
TMEM79                0.011   transmembrane protein 79 
OR7D2                 0.009   olfactory receptor, family 7, subfamily D, member 2 ...
PERP                  0.007   PERP, TP53 apoptosis effector 
CACNA1C               0.007   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.007   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.007   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.007   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.007   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.007   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.007   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.007   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.007   calcium channel, voltage-dependent, L type, alpha 1...
ATP6V0A1              0.007   ATPase, H+ transporting, lysosomal V0 subunit a1 iso...
ATP6V0A1              0.007   ATPase, H+ transporting, lysosomal V0 subunit a1 is...
ATP6V0A1              0.007   ATPase, H+ transporting, lysosomal V0 subunit a1 is...
RNF175                0.007   ring finger protein 175 
LOC100287119          0.006   PREDICTED: hypothetical protein XP_002342305 
LOC100134353          0.006   PREDICTED: hypothetical protein 
SLC7A6                0.006   solute carrier family 7 (cationic amino acid transp...
SLC7A6                0.006   solute carrier family 7 (cationic amino acid transp...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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