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Search of human proteins with 169213727
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169213727 PREDICTED: hypothetical protein [Homo sapiens]
(235 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169213727 PREDICTED: hypothetical protein [Homo sapiens] 461 e-130
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 35 0.043
gi|13994236 cat eye syndrome chromosome region, candidate 6 isof... 35 0.056
gi|61676082 shadow of prion protein [Homo sapiens] 35 0.056
gi|153945755 zinc finger protein 608 [Homo sapiens] 34 0.095
gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo ... 34 0.12
gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo ... 34 0.12
gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo ... 34 0.12
gi|119829187 alpha 1 type XVII collagen [Homo sapiens] 34 0.12
gi|205361109 multiple C2 domains, transmembrane 1 isoform L [Hom... 34 0.12
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens] 33 0.16
gi|169201482 PREDICTED: similar to hCG2038970 [Homo sapiens] 33 0.16
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 33 0.21
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 33 0.21
gi|67782356 corneodesmosin precursor [Homo sapiens] 33 0.21
gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... 33 0.21
gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens] 33 0.21
gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens] 33 0.21
gi|236462242 potassium voltage-gated channel, KQT-like subfamily... 33 0.28
gi|236462079 potassium voltage-gated channel, KQT-like subfamily... 33 0.28
gi|236461942 potassium voltage-gated channel, KQT-like subfamily... 33 0.28
gi|236461719 potassium voltage-gated channel, KQT-like subfamily... 33 0.28
gi|28373065 potassium voltage-gated channel, KQT-like subfamily,... 33 0.28
gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens] 32 0.36
gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens] 32 0.36
gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens] 32 0.36
gi|187761351 growth factor independent 1 [Homo sapiens] 32 0.47
gi|187761349 growth factor independent 1 [Homo sapiens] 32 0.47
gi|71037377 growth factor independent 1 [Homo sapiens] 32 0.47
gi|149944451 zinc finger, SWIM domain containing 5 [Homo sapiens] 32 0.47
>gi|169213727 PREDICTED: hypothetical protein [Homo sapiens]
Length = 235
Score = 461 bits (1185), Expect = e-130
Identities = 235/235 (100%), Positives = 235/235 (100%)
Query: 1 MEGGGLASGLRPRADGSTRALGSGSAARGPQKATTARTSTLSMLSAGRQAGFASHAGGAV 60
MEGGGLASGLRPRADGSTRALGSGSAARGPQKATTARTSTLSMLSAGRQAGFASHAGGAV
Sbjct: 1 MEGGGLASGLRPRADGSTRALGSGSAARGPQKATTARTSTLSMLSAGRQAGFASHAGGAV 60
Query: 61 GGAAGLQFRRPEKRLCRTRARLGKAPSACAGGGCRRSATSDDAPSSSSFSSRRAFLLGTS 120
GGAAGLQFRRPEKRLCRTRARLGKAPSACAGGGCRRSATSDDAPSSSSFSSRRAFLLGTS
Sbjct: 61 GGAAGLQFRRPEKRLCRTRARLGKAPSACAGGGCRRSATSDDAPSSSSFSSRRAFLLGTS 120
Query: 121 PTSPPSLRLLLRRLRLTLAGRGAQQAEVSSAVGASCVSIGSGNGCSPSGVAVSAVDSASR 180
PTSPPSLRLLLRRLRLTLAGRGAQQAEVSSAVGASCVSIGSGNGCSPSGVAVSAVDSASR
Sbjct: 121 PTSPPSLRLLLRRLRLTLAGRGAQQAEVSSAVGASCVSIGSGNGCSPSGVAVSAVDSASR 180
Query: 181 GGCRRGVMMRCASFCTSMATRRRQRRGLPGGTEQAAGALRTTGSLTPLYTNQPTQ 235
GGCRRGVMMRCASFCTSMATRRRQRRGLPGGTEQAAGALRTTGSLTPLYTNQPTQ
Sbjct: 181 GGCRRGVMMRCASFCTSMATRRRQRRGLPGGTEQAAGALRTTGSLTPLYTNQPTQ 235
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein
[Homo sapiens]
Length = 3969
Score = 35.4 bits (80), Expect = 0.043
Identities = 59/219 (26%), Positives = 84/219 (38%), Gaps = 31/219 (14%)
Query: 12 PRADGSTRALGSGSAARGPQKATTARTSTLSMLSAGRQAGFASHAGGAVGGAAGLQFRRP 71
P G+T G G RG A R L +L G G GG G P
Sbjct: 10 PARPGTTGG-GGGGGRRGLGGAPRQRVPAL-LLPPGPPVG---------GGGPGAPPSPP 58
Query: 72 EKRLCRTRARLGKAPSACAGGGCRRSATSDDAPSSSSFSSRRAFLLGTSPTSPPSLRLLL 131
+ A G + + GG SA S + SSSS SS +S +S P+L
Sbjct: 59 A--VAAAAAAAGSSGAGVPGGAAAASAASSSSASSSSSSS-------SSASSGPAL---- 105
Query: 132 RRLRLTLAGRGAQQA-EVSSAVGASCVSIGSGNGCSPSGVAVSAVDSASRGGCRRGVMMR 190
LR+ G G A +VS+A+G + + G S G + G V +R
Sbjct: 106 --LRV---GPGFDAALQVSAAIGTNLRRFRAVFGESGGGGGSGEDEQFLGFGSDEEVRVR 160
Query: 191 CASFCTSMATRRRQRRGLP-GGTEQAAGALRTTGSLTPL 228
+ S+ T R+ RG P G+++ + L +PL
Sbjct: 161 SPTRSPSVKTSPRKPRGRPRSGSDRNSAILSDPSVFSPL 199
>gi|13994236 cat eye syndrome chromosome region, candidate 6 isoform
a [Homo sapiens]
Length = 578
Score = 35.0 bits (79), Expect = 0.056
Identities = 50/171 (29%), Positives = 67/171 (39%), Gaps = 23/171 (13%)
Query: 24 GSAARGPQKATTARTSTLSMLSAGRQAGFASHAGGAVGGAAGLQFRRPEKRLCRTRARLG 83
G + RG + + + TST + S G G GG+ + G + ++ L ++ +
Sbjct: 34 GGSFRGRRGSGDSSTSTST--SRGGGGGRRGGGGGSPSSSTGAEREDDDESLSVSKPLVP 91
Query: 84 KAPSACAGGGCRRSATSDDAPSSSSFSSRRAFLLGTS-PTSPPSLRLLLRRLRLTLA--G 140
A A G + A + AP + FSS A TS PTS S+ T A G
Sbjct: 92 NA--ALLGPPAQVGAPAGPAPVA--FSSSAATSSSTSTPTSSCSM---------TAADFG 138
Query: 141 RGAQQAEVS-----SAVGASCVSIGSGNGCSPSGVAVSAVDSASRGGCRRG 186
GA V SA GA GSG C P D R G RRG
Sbjct: 139 GGAAAGAVGGPGSRSAGGAGGTGTGSGASCCPCCCCCGCPDRPGRRGRRRG 189
>gi|61676082 shadow of prion protein [Homo sapiens]
Length = 151
Score = 35.0 bits (79), Expect = 0.056
Identities = 45/139 (32%), Positives = 54/139 (38%), Gaps = 33/139 (23%)
Query: 5 GLASGLRPRADGSTRALGSGSAARG-------PQKATTARTSTLSMLSAGRQAGFASHAG 57
G A G R A GS R G ARG P + A S+L + +AG AG A AG
Sbjct: 22 GAAKGGRGGARGSARG-GVRGGARGASRVRVRPAQRYGAPGSSLRVAAAGAAAGAA--AG 78
Query: 58 GAVGGAAGLQFRRPEKRLCRTRARLGKAPSACAGGGCRRSATSDDA-----PSSSSFSSR 112
A G AAG +RR AG G R +D + S
Sbjct: 79 AAAGLAAGSGWRR------------------AAGPGERGLEDEEDGVPGGNGTGPGIYSY 120
Query: 113 RAFLLGTSPTSPPSLRLLL 131
RA+ G PT P L L+L
Sbjct: 121 RAWTSGAGPTRGPRLCLVL 139
>gi|153945755 zinc finger protein 608 [Homo sapiens]
Length = 1512
Score = 34.3 bits (77), Expect = 0.095
Identities = 45/171 (26%), Positives = 67/171 (39%), Gaps = 17/171 (9%)
Query: 38 TSTLSMLSAGRQAGFASHAGGAVGGAA-GLQFRRPEKRLCRTRARLGKAPSACAGGGCRR 96
T+T S ++ G AS GA A GL+F + A G + + +R
Sbjct: 54 TTTTSSSNSKDCGGPASSGAGATAALADGLKFASVQ-----ASAPQGNSHKETSKSKVKR 108
Query: 97 SATSDDAPSSSSFSSRRAFLLGTSPTSPPSLRLLLRRLRLTLAGRGAQQAEVSSAVGASC 156
S TS DA S A L G S R ++ GR + ++SA+G S
Sbjct: 109 SKTSKDANKSLP----SAALYGIPEISSTGKRQEVQ-------GRPGEATGMNSALGQSV 157
Query: 157 VSIGSGNGCSPSGVAVSAVDSASRGGCRRGVMMRCASFCTSMATRRRQRRG 207
S GSGN S S ++ +A G C + + +S +R + G
Sbjct: 158 SSGGSGNPNSNSTSTSTSAATAGAGSCGKSKEEKPGKSQSSRGAKRDKDAG 208
>gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo
sapiens]
Length = 355
Score = 33.9 bits (76), Expect = 0.12
Identities = 39/136 (28%), Positives = 51/136 (37%), Gaps = 19/136 (13%)
Query: 4 GGLASGLRPRADGSTRALGSGSAARGPQK-------ATTARTSTLSMLSAGRQAGFASHA 56
G +G P G TRA G+GSAARGP + A A L + GR F+ +
Sbjct: 205 GARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRS 264
Query: 57 GGAVGGAAGLQF--RRP-----EKRLCRTRARLGKAPSACAGGGCRRSATSDDAPSSSSF 109
A L+F RP +R CR P++ R S P +S
Sbjct: 265 SLA---RPPLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPS--RPRASGL 319
Query: 110 SSRRAFLLGTSPTSPP 125
+R A G P P
Sbjct: 320 RARAARRPGLDPGPAP 335
>gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo
sapiens]
Length = 355
Score = 33.9 bits (76), Expect = 0.12
Identities = 39/136 (28%), Positives = 51/136 (37%), Gaps = 19/136 (13%)
Query: 4 GGLASGLRPRADGSTRALGSGSAARGPQK-------ATTARTSTLSMLSAGRQAGFASHA 56
G +G P G TRA G+GSAARGP + A A L + GR F+ +
Sbjct: 205 GARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRS 264
Query: 57 GGAVGGAAGLQF--RRP-----EKRLCRTRARLGKAPSACAGGGCRRSATSDDAPSSSSF 109
A L+F RP +R CR P++ R S P +S
Sbjct: 265 SLA---RPPLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPS--RPRASGL 319
Query: 110 SSRRAFLLGTSPTSPP 125
+R A G P P
Sbjct: 320 RARAARRPGLDPGPAP 335
>gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo
sapiens]
Length = 355
Score = 33.9 bits (76), Expect = 0.12
Identities = 39/136 (28%), Positives = 51/136 (37%), Gaps = 19/136 (13%)
Query: 4 GGLASGLRPRADGSTRALGSGSAARGPQK-------ATTARTSTLSMLSAGRQAGFASHA 56
G +G P G TRA G+GSAARGP + A A L + GR F+ +
Sbjct: 205 GARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRS 264
Query: 57 GGAVGGAAGLQF--RRP-----EKRLCRTRARLGKAPSACAGGGCRRSATSDDAPSSSSF 109
A L+F RP +R CR P++ R S P +S
Sbjct: 265 SLA---RPPLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPS--RPRASGL 319
Query: 110 SSRRAFLLGTSPTSPP 125
+R A G P P
Sbjct: 320 RARAARRPGLDPGPAP 335
>gi|119829187 alpha 1 type XVII collagen [Homo sapiens]
Length = 1497
Score = 33.9 bits (76), Expect = 0.12
Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 25/87 (28%)
Query: 8 SGLRPRADGSTRALGSGSAARGPQKATTARTSTLSMLSAGRQAGFASHAGGAVGGAAGLQ 67
SGL+ A+G + + +T +T+T + S G G S GG VGGA G
Sbjct: 400 SGLKAEANGDLKTV-----------STKGKTTTADIHSYGSSGGGGSGGGGGVGGAGG-- 446
Query: 68 FRRPEKRLCRTRARLGKAPSACAGGGC 94
G AP+ C G C
Sbjct: 447 ------------GPWGPAPAWCPCGSC 461
>gi|205361109 multiple C2 domains, transmembrane 1 isoform L [Homo
sapiens]
Length = 999
Score = 33.9 bits (76), Expect = 0.12
Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 8/118 (6%)
Query: 12 PRADGSTRALGSGSAARGP----QKATTARTSTLSMLSAGRQAGFASHAGGAVGGAAGLQ 67
P G+ A GSG+ +R +K R + S + + GGA G
Sbjct: 61 PVGTGNAPARGSGAGSRWSGFKKRKQVLDRVFSSSQPNLCCSSPEPLEPGGAGRAEQGST 120
Query: 68 FRRPEKRLCRTRARLGKAPSACAGGGCRRSATSDDAPSSSSFSSRRAFLLGTSPTSPP 125
RR + + A S AGG + D APSSSS SS L +SP PP
Sbjct: 121 LRRRIREHLLPAVKGPAAASGAAGGTPPGGRSPDSAPSSSSASSS----LSSSPQPPP 174
Score = 28.5 bits (62), Expect = 5.2
Identities = 41/164 (25%), Positives = 59/164 (35%), Gaps = 17/164 (10%)
Query: 25 SAARGPQKATTARTSTLSMLSAGRQAGFASHAGGAVGGAAGLQFRRPEKRLCRTRARLGK 84
+AA G + A +S + L Q G GG G A G PE+R T +
Sbjct: 5 AAAAGEPEPPAASSSFQARLWKNLQLGVGRSKGGGGGRAGG-----PERRTADTPS---P 56
Query: 85 APSACAGGGCRRSATSDDAPSSSSFSSRRAFLLGTSPTSPPSLRLLL-RRLRLTLAGRGA 143
+P G G + S S F R+ L +S P+L L AGR
Sbjct: 57 SPPPPVGTGNAPARGSGAGSRWSGFKKRKQVLDRVFSSSQPNLCCSSPEPLEPGGAGRAE 116
Query: 144 Q--------QAEVSSAVGASCVSIGSGNGCSPSGVAVSAVDSAS 179
Q + + AV + G+ G P G + + S+S
Sbjct: 117 QGSTLRRRIREHLLPAVKGPAAASGAAGGTPPGGRSPDSAPSSS 160
>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 466
Score = 33.5 bits (75), Expect = 0.16
Identities = 52/200 (26%), Positives = 69/200 (34%), Gaps = 34/200 (17%)
Query: 16 GSTRALGSGSAARGPQKATTARTSTLSMLSAGRQAGFASHAGGAVGGAAGLQFRRPEKRL 75
GS A + GP A+ R L+ A G ASH+G G G R +
Sbjct: 122 GSAPAPSGAQSCGGPAPASALRRP-LTQWDASGGGGRASHSGPRAGTPGG---GRSSRAG 177
Query: 76 CRTRARLGKAPSACAGGGCRRSATSDDAPSSSSFSSRRAFLLGTS---PTSPPSLRLLLR 132
R + L P G SSRR LG+S +PP R L
Sbjct: 178 ARRKTPLSLCPLKLRKG-----------------SSRRCQGLGSSWGGSGTPPPPRALWN 220
Query: 133 RLRLTLAGRGAQQAEVSSAVGASCVSIGSGNGCSPSGVAVSAVDSASR--GGCRRGVMMR 190
R G +A+V + +C G+ PS V V + +R GG +R
Sbjct: 221 R----HGGAAGARAQVRGSEKRAC----PGSTLPPSSVLAGCVGTRARGHGGVQRQRFSA 272
Query: 191 CASFCTSMATRRRQRRGLPG 210
+S T T R PG
Sbjct: 273 PSSHSTGARTLPTPSRARPG 292
>gi|169201482 PREDICTED: similar to hCG2038970 [Homo sapiens]
Length = 821
Score = 33.5 bits (75), Expect = 0.16
Identities = 48/199 (24%), Positives = 68/199 (34%), Gaps = 28/199 (14%)
Query: 31 QKATTARTSTLSMLSAGRQAGFASHAGGAVGGAAGLQFRRPEKRLCRTRARLGKAPSACA 90
+K + RT T+SMLS Q + G +AG+ +LCR LG
Sbjct: 472 EKPLSQRTCTVSMLSEPPQGHWRRQPGSGYPRSAGVTAFTLMWKLCRGFPNLGAEE---F 528
Query: 91 GGGCRRSATSDDAPSSSSFSSRRAFLLGTSPTSPPSLRLLLRRLRLTLAGRGAQQAEVSS 150
G C R TS S + P +P + + RL T R A +
Sbjct: 529 GVRCMRVTTSSRVSFQQPSSGAAQEAMEACPLAPNAKTVATLRLPRTQPVRAALK----- 583
Query: 151 AVGASCVSIGSGNGCSPSGVAVSAVDSASRGGCRRGVMMRCASFCTSMATRRRQRRGLPG 210
+S GC+P ++A+ G C C +A + RG G
Sbjct: 584 ------LSSFLAQGCTP----LTALQC--------GRECPCGRLCRGLAAEHKYSRGHSG 625
Query: 211 GTEQAA--GALRTTGSLTP 227
+ A GA R L P
Sbjct: 626 PSTPATCDGASRPAQHLLP 644
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 33.1 bits (74), Expect = 0.21
Identities = 52/204 (25%), Positives = 69/204 (33%), Gaps = 26/204 (12%)
Query: 3 GGGLASGLRPRADGSTRALGSGSAARGPQ-------------KATTARTSTLSMLSAGRQ 49
G L G G R G G+AA GP +A R ++ +AGRQ
Sbjct: 813 GAVLVQGHEAGVAGGAR--GGGAAAGGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGRQ 870
Query: 50 AGFASHAGGAVGGAAGLQFRRPEKRLCRTRARLGKAPSACAGGGCRRSATSDDAPSSSSF 109
A G V G ++ CR + L A +A A G R + P +
Sbjct: 871 GAGAGGGGRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQGA 930
Query: 110 SSRRAFLLGTSPTSPPSLRLLLRRLRLTLAGRGAQQAEVS---SAVGASCVSIGSGNGCS 166
S R R RR + LAG GA A + G V + +
Sbjct: 931 PSHR-------HRPGARGRRSRRRAAVALAG-GAHPARAALGRRRGGGQAVGARAAHQAR 982
Query: 167 PSGVAVSAVDSASRGGCRRGVMMR 190
+G V V A+R G GV R
Sbjct: 983 LAGGQVDQVVVAARAGDADGVRGR 1006
Score = 30.0 bits (66), Expect = 1.8
Identities = 23/54 (42%), Positives = 26/54 (48%), Gaps = 10/54 (18%)
Query: 49 QAGFASHA------GGAVGGAAGLQFRRPEKRLCRTRARLG---KAPSACAGGG 93
Q G A HA GGA+GG AGL P +R C R R G + P GGG
Sbjct: 567 QLGTAPHAHVPTVLGGALGGRAGL-VAAPARRECPARRRGGCWPRRPRRRHGGG 619
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 33.1 bits (74), Expect = 0.21
Identities = 52/204 (25%), Positives = 69/204 (33%), Gaps = 26/204 (12%)
Query: 3 GGGLASGLRPRADGSTRALGSGSAARGPQ-------------KATTARTSTLSMLSAGRQ 49
G L G G R G G+AA GP +A R ++ +AGRQ
Sbjct: 813 GAVLVQGHEAGVAGGAR--GGGAAAGGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGRQ 870
Query: 50 AGFASHAGGAVGGAAGLQFRRPEKRLCRTRARLGKAPSACAGGGCRRSATSDDAPSSSSF 109
A G V G ++ CR + L A +A A G R + P +
Sbjct: 871 GAGAGGGGRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQGA 930
Query: 110 SSRRAFLLGTSPTSPPSLRLLLRRLRLTLAGRGAQQAEVS---SAVGASCVSIGSGNGCS 166
S R R RR + LAG GA A + G V + +
Sbjct: 931 PSHR-------HRPGARGRRSRRRAAVALAG-GAHPARAALGRRRGGGQAVGARAAHQAR 982
Query: 167 PSGVAVSAVDSASRGGCRRGVMMR 190
+G V V A+R G GV R
Sbjct: 983 LAGGQVDQVVVAARAGDADGVRGR 1006
Score = 30.0 bits (66), Expect = 1.8
Identities = 23/54 (42%), Positives = 26/54 (48%), Gaps = 10/54 (18%)
Query: 49 QAGFASHA------GGAVGGAAGLQFRRPEKRLCRTRARLG---KAPSACAGGG 93
Q G A HA GGA+GG AGL P +R C R R G + P GGG
Sbjct: 567 QLGTAPHAHVPTVLGGALGGRAGL-VAAPARRECPARRRGGCWPRRPRRRHGGG 619
>gi|67782356 corneodesmosin precursor [Homo sapiens]
Length = 529
Score = 33.1 bits (74), Expect = 0.21
Identities = 41/166 (24%), Positives = 71/166 (42%), Gaps = 29/166 (17%)
Query: 1 MEGGGLASGLRPRADGSTRALGSGSAARGPQKATTARTSTLSMLSAGR-----------Q 49
+ G G +SG + GS+ + S S+AR ++ +S S+ G Q
Sbjct: 56 LTGKGDSSGFSSYS-GSSSSGSSISSARSSGGGSSGSSSGSSIAQGGSAGSFKPGTGYSQ 114
Query: 50 AGFASHAGGAVGGAAGLQFRRPEKRLCRTRARLGKAPSACAGGGCRRSATSDDAPSSSSF 109
++S +G ++ GA+G ++LG + S G ++S + SSSSF
Sbjct: 115 VSYSSGSGSSLQGASG-------------SSQLGSSSSHSGSSGSHSGSSSSHSSSSSSF 161
Query: 110 S-SRRAFLLGTS---PTSPPSLRLLLRRLRLTLAGRGAQQAEVSSA 151
S +F +G PT+ S R +L + + +Q VSS+
Sbjct: 162 QFSSSSFQVGNGSALPTNDNSYRGILNPSQPGQSSSSSQTFGVSSS 207
>gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribose
polymerase [Homo sapiens]
Length = 1327
Score = 33.1 bits (74), Expect = 0.21
Identities = 36/116 (31%), Positives = 46/116 (39%), Gaps = 31/116 (26%)
Query: 78 TRARLGKAPSACAGGGCRRSATSDDAPSSSSFSSRRAFLLGTSPTSPPSLRLLLRRLRLT 137
T + G AP+ AG G S +S +P+SSS S SP+SP
Sbjct: 110 TSSAAGVAPNP-AGSGSNNSPSSSSSPTSSSSS---------SPSSP------------- 146
Query: 138 LAGRGAQQAEVSSAVGASCVSIGSGNGCSPSGVAVSAVDSASR---GGCRRGVMMR 190
G+ AE A G S + G G + G V AV A R CR G + R
Sbjct: 147 ----GSSLAESPEAAGVSSTA-PLGPGAAGPGTGVPAVSGALRELLEACRNGDVSR 197
>gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]
Length = 1512
Score = 33.1 bits (74), Expect = 0.21
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 3 GGGLASGLRPRADGSTRALGSGSAARGPQKATTARTSTLSMLSAGRQAGFASHAGGAVGG 62
GG SG P + T+ G GS R P++ R+S+ R+ G GG
Sbjct: 172 GGTGGSGGSPASSSGTQRRGEGSERR-PRR--DRRSSSGRSKERHREH---RRRDGQRGG 225
Query: 63 AAGLQFRRPEKRLCRTRARLGKAPSACAGGGCRRSATSDDAPSSS 107
+ + R RA + K+ S+ + GG R+SA++ + SSS
Sbjct: 226 SEASKSRSRHSHSGEERAEVAKSGSSSSSGGRRKSASATSSSSSS 270
>gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]
Length = 1452
Score = 33.1 bits (74), Expect = 0.21
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 3 GGGLASGLRPRADGSTRALGSGSAARGPQKATTARTSTLSMLSAGRQAGFASHAGGAVGG 62
GG SG P + T+ G GS R P++ R+S+ R+ G GG
Sbjct: 172 GGTGGSGGSPASSSGTQRRGEGSERR-PRR--DRRSSSGRSKERHREH---RRRDGQRGG 225
Query: 63 AAGLQFRRPEKRLCRTRARLGKAPSACAGGGCRRSATSDDAPSSS 107
+ + R RA + K+ S+ + GG R+SA++ + SSS
Sbjct: 226 SEASKSRSRHSHSGEERAEVAKSGSSSSSGGRRKSASATSSSSSS 270
>gi|236462242 potassium voltage-gated channel, KQT-like subfamily,
member 5 isoform 5 [Homo sapiens]
Length = 822
Score = 32.7 bits (73), Expect = 0.28
Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 2 EGGGLASGLRPRADGSTRALGSGSAARGPQKATTARTSTLSMLSAGRQAG---FASHAGG 58
EGG A+GL ++ + A G G G + + R L +A R G + A
Sbjct: 10 EGG--AAGLWVKSGAAAAAAGGGRLGSGMKDVESGRGRVLLNSAAARGDGLLLLGTRAAT 67
Query: 59 AVGGAAGLQFRRPEKRLCRTRARLGKAPSACAGGGCRRS 97
GG GL+ R K+ R + LGK S + CRR+
Sbjct: 68 LGGGGGGLRESRRGKQGAR-MSLLGKPLSYTSSQSCRRN 105
Score = 28.5 bits (62), Expect = 5.2
Identities = 37/136 (27%), Positives = 44/136 (32%), Gaps = 31/136 (22%)
Query: 55 HAGGAVGGAAGLQFRRPEKRLCRTRARLGKAPSACAGGGCRRSATSDDAPSSSSFSSRRA 114
HAGG GGAAGL + A +A AGGG S D S R
Sbjct: 5 HAGGEEGGAAGLWVK-------------SGAAAAAAGGGRLGSGMKDVE------SGRGR 45
Query: 115 FLLGTSPTSPPSLRLLLRRLRLTLAGRGAQQAEVSSAVGASCVSIGSGNGCSPSGVAVSA 174
LL ++ L LL R G G + GA +G
Sbjct: 46 VLLNSAAARGDGLLLLGTRAATLGGGGGGLRESRRGKQGARMSLLG------------KP 93
Query: 175 VDSASRGGCRRGVMMR 190
+ S CRR V R
Sbjct: 94 LSYTSSQSCRRNVKYR 109
>gi|236462079 potassium voltage-gated channel, KQT-like subfamily,
member 5 isoform 4 [Homo sapiens]
Length = 951
Score = 32.7 bits (73), Expect = 0.28
Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 2 EGGGLASGLRPRADGSTRALGSGSAARGPQKATTARTSTLSMLSAGRQAG---FASHAGG 58
EGG A+GL ++ + A G G G + + R L +A R G + A
Sbjct: 10 EGG--AAGLWVKSGAAAAAAGGGRLGSGMKDVESGRGRVLLNSAAARGDGLLLLGTRAAT 67
Query: 59 AVGGAAGLQFRRPEKRLCRTRARLGKAPSACAGGGCRRS 97
GG GL+ R K+ R + LGK S + CRR+
Sbjct: 68 LGGGGGGLRESRRGKQGAR-MSLLGKPLSYTSSQSCRRN 105
Score = 28.5 bits (62), Expect = 5.2
Identities = 37/136 (27%), Positives = 44/136 (32%), Gaps = 31/136 (22%)
Query: 55 HAGGAVGGAAGLQFRRPEKRLCRTRARLGKAPSACAGGGCRRSATSDDAPSSSSFSSRRA 114
HAGG GGAAGL + A +A AGGG S D S R
Sbjct: 5 HAGGEEGGAAGLWVK-------------SGAAAAAAGGGRLGSGMKDVE------SGRGR 45
Query: 115 FLLGTSPTSPPSLRLLLRRLRLTLAGRGAQQAEVSSAVGASCVSIGSGNGCSPSGVAVSA 174
LL ++ L LL R G G + GA +G
Sbjct: 46 VLLNSAAARGDGLLLLGTRAATLGGGGGGLRESRRGKQGARMSLLG------------KP 93
Query: 175 VDSASRGGCRRGVMMR 190
+ S CRR V R
Sbjct: 94 LSYTSSQSCRRNVKYR 109
>gi|236461942 potassium voltage-gated channel, KQT-like subfamily,
member 5 isoform 3 [Homo sapiens]
Length = 942
Score = 32.7 bits (73), Expect = 0.28
Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 2 EGGGLASGLRPRADGSTRALGSGSAARGPQKATTARTSTLSMLSAGRQAG---FASHAGG 58
EGG A+GL ++ + A G G G + + R L +A R G + A
Sbjct: 10 EGG--AAGLWVKSGAAAAAAGGGRLGSGMKDVESGRGRVLLNSAAARGDGLLLLGTRAAT 67
Query: 59 AVGGAAGLQFRRPEKRLCRTRARLGKAPSACAGGGCRRS 97
GG GL+ R K+ R + LGK S + CRR+
Sbjct: 68 LGGGGGGLRESRRGKQGAR-MSLLGKPLSYTSSQSCRRN 105
Score = 28.5 bits (62), Expect = 5.2
Identities = 37/136 (27%), Positives = 44/136 (32%), Gaps = 31/136 (22%)
Query: 55 HAGGAVGGAAGLQFRRPEKRLCRTRARLGKAPSACAGGGCRRSATSDDAPSSSSFSSRRA 114
HAGG GGAAGL + A +A AGGG S D S R
Sbjct: 5 HAGGEEGGAAGLWVK-------------SGAAAAAAGGGRLGSGMKDVE------SGRGR 45
Query: 115 FLLGTSPTSPPSLRLLLRRLRLTLAGRGAQQAEVSSAVGASCVSIGSGNGCSPSGVAVSA 174
LL ++ L LL R G G + GA +G
Sbjct: 46 VLLNSAAARGDGLLLLGTRAATLGGGGGGLRESRRGKQGARMSLLG------------KP 93
Query: 175 VDSASRGGCRRGVMMR 190
+ S CRR V R
Sbjct: 94 LSYTSSQSCRRNVKYR 109
>gi|236461719 potassium voltage-gated channel, KQT-like subfamily,
member 5 isoform 2 [Homo sapiens]
Length = 923
Score = 32.7 bits (73), Expect = 0.28
Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 2 EGGGLASGLRPRADGSTRALGSGSAARGPQKATTARTSTLSMLSAGRQAG---FASHAGG 58
EGG A+GL ++ + A G G G + + R L +A R G + A
Sbjct: 10 EGG--AAGLWVKSGAAAAAAGGGRLGSGMKDVESGRGRVLLNSAAARGDGLLLLGTRAAT 67
Query: 59 AVGGAAGLQFRRPEKRLCRTRARLGKAPSACAGGGCRRS 97
GG GL+ R K+ R + LGK S + CRR+
Sbjct: 68 LGGGGGGLRESRRGKQGAR-MSLLGKPLSYTSSQSCRRN 105
Score = 28.5 bits (62), Expect = 5.2
Identities = 37/136 (27%), Positives = 44/136 (32%), Gaps = 31/136 (22%)
Query: 55 HAGGAVGGAAGLQFRRPEKRLCRTRARLGKAPSACAGGGCRRSATSDDAPSSSSFSSRRA 114
HAGG GGAAGL + A +A AGGG S D S R
Sbjct: 5 HAGGEEGGAAGLWVK-------------SGAAAAAAGGGRLGSGMKDVE------SGRGR 45
Query: 115 FLLGTSPTSPPSLRLLLRRLRLTLAGRGAQQAEVSSAVGASCVSIGSGNGCSPSGVAVSA 174
LL ++ L LL R G G + GA +G
Sbjct: 46 VLLNSAAARGDGLLLLGTRAATLGGGGGGLRESRRGKQGARMSLLG------------KP 93
Query: 175 VDSASRGGCRRGVMMR 190
+ S CRR V R
Sbjct: 94 LSYTSSQSCRRNVKYR 109
>gi|28373065 potassium voltage-gated channel, KQT-like subfamily,
member 5 isoform 1 [Homo sapiens]
Length = 932
Score = 32.7 bits (73), Expect = 0.28
Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 2 EGGGLASGLRPRADGSTRALGSGSAARGPQKATTARTSTLSMLSAGRQAG---FASHAGG 58
EGG A+GL ++ + A G G G + + R L +A R G + A
Sbjct: 10 EGG--AAGLWVKSGAAAAAAGGGRLGSGMKDVESGRGRVLLNSAAARGDGLLLLGTRAAT 67
Query: 59 AVGGAAGLQFRRPEKRLCRTRARLGKAPSACAGGGCRRS 97
GG GL+ R K+ R + LGK S + CRR+
Sbjct: 68 LGGGGGGLRESRRGKQGAR-MSLLGKPLSYTSSQSCRRN 105
Score = 28.5 bits (62), Expect = 5.2
Identities = 37/136 (27%), Positives = 44/136 (32%), Gaps = 31/136 (22%)
Query: 55 HAGGAVGGAAGLQFRRPEKRLCRTRARLGKAPSACAGGGCRRSATSDDAPSSSSFSSRRA 114
HAGG GGAAGL + A +A AGGG S D S R
Sbjct: 5 HAGGEEGGAAGLWVK-------------SGAAAAAAGGGRLGSGMKDVE------SGRGR 45
Query: 115 FLLGTSPTSPPSLRLLLRRLRLTLAGRGAQQAEVSSAVGASCVSIGSGNGCSPSGVAVSA 174
LL ++ L LL R G G + GA +G
Sbjct: 46 VLLNSAAARGDGLLLLGTRAATLGGGGGGLRESRRGKQGARMSLLG------------KP 93
Query: 175 VDSASRGGCRRGVMMR 190
+ S CRR V R
Sbjct: 94 LSYTSSQSCRRNVKYR 109
>gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 32.3 bits (72), Expect = 0.36
Identities = 45/174 (25%), Positives = 64/174 (36%), Gaps = 21/174 (12%)
Query: 58 GAVGGAAGLQFRRPEKRLCRTRARLGKAPSACAGGGCRRSATSDDAPSSSSFSSRRAFLL 117
G+ GG Q P++ AP A R A S S ++ A L
Sbjct: 188 GSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLP 247
Query: 118 GTSPT---SPPSLRLLLRRLRLTLAGRGAQQAEVSSAVGASCVSIGSGNG-CSPSGVAVS 173
P +PP+ L R + AGR + E +A + C ++G G C +G +
Sbjct: 248 LPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQP 307
Query: 174 AVDSASRGGCRRGVMMRCASFCTSMATRRRQRRGLPGGTEQAAGALRTTGSLTP 227
S + CR FC RRR+RR GG + G T G +P
Sbjct: 308 PATSGNGERCR---------FC-----RRRRRR---GGGGEGEGTHATHGPASP 344
>gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 32.3 bits (72), Expect = 0.36
Identities = 45/174 (25%), Positives = 64/174 (36%), Gaps = 21/174 (12%)
Query: 58 GAVGGAAGLQFRRPEKRLCRTRARLGKAPSACAGGGCRRSATSDDAPSSSSFSSRRAFLL 117
G+ GG Q P++ AP A R A S S ++ A L
Sbjct: 188 GSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLP 247
Query: 118 GTSPT---SPPSLRLLLRRLRLTLAGRGAQQAEVSSAVGASCVSIGSGNG-CSPSGVAVS 173
P +PP+ L R + AGR + E +A + C ++G G C +G +
Sbjct: 248 LPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQP 307
Query: 174 AVDSASRGGCRRGVMMRCASFCTSMATRRRQRRGLPGGTEQAAGALRTTGSLTP 227
S + CR FC RRR+RR GG + G T G +P
Sbjct: 308 PATSGNGERCR---------FC-----RRRRRR---GGGGEGEGTHATHGPASP 344
>gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 32.3 bits (72), Expect = 0.36
Identities = 45/174 (25%), Positives = 64/174 (36%), Gaps = 21/174 (12%)
Query: 58 GAVGGAAGLQFRRPEKRLCRTRARLGKAPSACAGGGCRRSATSDDAPSSSSFSSRRAFLL 117
G+ GG Q P++ AP A R A S S ++ A L
Sbjct: 188 GSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGSGPAQPAHLP 247
Query: 118 GTSPT---SPPSLRLLLRRLRLTLAGRGAQQAEVSSAVGASCVSIGSGNG-CSPSGVAVS 173
P +PP+ L R + AGR + E +A + C ++G G C +G +
Sbjct: 248 LPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQP 307
Query: 174 AVDSASRGGCRRGVMMRCASFCTSMATRRRQRRGLPGGTEQAAGALRTTGSLTP 227
S + CR FC RRR+RR GG + G T G +P
Sbjct: 308 PATSGNGERCR---------FC-----RRRRRR---GGGGEGEGTHATHGPASP 344
>gi|187761351 growth factor independent 1 [Homo sapiens]
Length = 422
Score = 32.0 bits (71), Expect = 0.47
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 41 LSMLSAGRQAGFASHAGGAVGGAAGLQFRRPEKRLCRTRARLGKAPSACAGGGCRRSATS 100
L + A +A S+AGGA A PE +L R +P +C G C RS+
Sbjct: 29 LENVPAPSRADSTSNAGGAK--AEPRDRLSPESQLTEAPDRASASPDSCEGSVCERSSEF 86
Query: 101 DD-----APSSSSFSSR 112
+D +PS+S S +
Sbjct: 87 EDFWRPPSPSASPASEK 103
>gi|187761349 growth factor independent 1 [Homo sapiens]
Length = 422
Score = 32.0 bits (71), Expect = 0.47
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 41 LSMLSAGRQAGFASHAGGAVGGAAGLQFRRPEKRLCRTRARLGKAPSACAGGGCRRSATS 100
L + A +A S+AGGA A PE +L R +P +C G C RS+
Sbjct: 29 LENVPAPSRADSTSNAGGAK--AEPRDRLSPESQLTEAPDRASASPDSCEGSVCERSSEF 86
Query: 101 DD-----APSSSSFSSR 112
+D +PS+S S +
Sbjct: 87 EDFWRPPSPSASPASEK 103
>gi|71037377 growth factor independent 1 [Homo sapiens]
Length = 422
Score = 32.0 bits (71), Expect = 0.47
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 41 LSMLSAGRQAGFASHAGGAVGGAAGLQFRRPEKRLCRTRARLGKAPSACAGGGCRRSATS 100
L + A +A S+AGGA A PE +L R +P +C G C RS+
Sbjct: 29 LENVPAPSRADSTSNAGGAK--AEPRDRLSPESQLTEAPDRASASPDSCEGSVCERSSEF 86
Query: 101 DD-----APSSSSFSSR 112
+D +PS+S S +
Sbjct: 87 EDFWRPPSPSASPASEK 103
>gi|149944451 zinc finger, SWIM domain containing 5 [Homo sapiens]
Length = 1185
Score = 32.0 bits (71), Expect = 0.47
Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 12 PRADGSTRALGSGSAARGPQK---ATTARTSTLSMLSAGRQAGFASHAGGAVGGAAGLQF 68
P A + A G+ A GPQ A S ++AG G + AG A G GL F
Sbjct: 121 PGAGAAGGAAGASPAEEGPQPPPGAAAPAGSAPGGVAAGASPGLGAGAGAAGCGGEGLPF 180
Query: 69 RR 70
RR
Sbjct: 181 RR 182
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.128 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,362,425
Number of Sequences: 37866
Number of extensions: 431985
Number of successful extensions: 2778
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 142
Number of HSP's that attempted gapping in prelim test: 2615
Number of HSP's gapped (non-prelim): 292
length of query: 235
length of database: 18,247,518
effective HSP length: 99
effective length of query: 136
effective length of database: 14,498,784
effective search space: 1971834624
effective search space used: 1971834624
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.