Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 169212923
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169212923 PREDICTED: hypothetical protein [Homo sapiens]
(202 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169212923 PREDICTED: hypothetical protein [Homo sapiens] 394 e-110
gi|113427727 PREDICTED: hypothetical protein [Homo sapiens] 347 4e-96
gi|239752538 PREDICTED: hypothetical protein, partial [Homo sapi... 331 2e-91
gi|169206039 PREDICTED: hypothetical protein [Homo sapiens] 312 1e-85
gi|113424287 PREDICTED: hypothetical protein [Homo sapiens] 312 1e-85
gi|113424103 PREDICTED: hypothetical protein [Homo sapiens] 312 1e-85
gi|17158023 hypothetical protein LOC85395 [Homo sapiens] 290 6e-79
gi|109255230 centrosomal protein 170kDa isoform beta [Homo sapiens] 40 0.001
gi|109255228 centrosomal protein 170kDa isoform alpha [Homo sapi... 40 0.001
gi|109255232 centrosomal protein 170kDa isoform gamma [Homo sapi... 40 0.001
gi|194294519 nuclear receptor subfamily 1, group H, member 3 iso... 33 0.13
gi|194294517 nuclear receptor subfamily 1, group H, member 3 iso... 33 0.13
gi|148746195 trichohyalin [Homo sapiens] 33 0.22
gi|23397678 signal transducer and activator of transcription 6 [... 32 0.28
gi|19923191 minichromosome maintenance complex component 3 assoc... 31 0.82
gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sap... 30 1.1
gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sap... 30 1.1
gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sap... 30 1.1
gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapi... 30 1.1
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 30 1.1
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 30 1.1
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... 30 1.1
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... 30 1.1
gi|102467235 inner centromere protein antigens 135/155kDa isofor... 30 1.1
gi|166795299 solute carrier family 2 (facilitated glucose transp... 30 1.4
gi|23238200 RELT tumor necrosis factor receptor precursor [Homo ... 30 1.4
gi|21361873 RELT tumor necrosis factor receptor precursor [Homo ... 30 1.4
gi|102467242 inner centromere protein antigens 135/155kDa isofor... 30 1.8
gi|21483182 zinc finger with KRAB and SCAN domains 5 [Homo sapiens] 30 1.8
gi|11036642 zinc finger with KRAB and SCAN domains 5 [Homo sapiens] 30 1.8
>gi|169212923 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 394 bits (1013), Expect = e-110
Identities = 202/202 (100%), Positives = 202/202 (100%)
Query: 1 MVACILPNLSHPGNNVLDFSDMLLEGLIRIIPPFINTNIFARTKIDPSALVQKLELDVRS 60
MVACILPNLSHPGNNVLDFSDMLLEGLIRIIPPFINTNIFARTKIDPSALVQKLELDVRS
Sbjct: 1 MVACILPNLSHPGNNVLDFSDMLLEGLIRIIPPFINTNIFARTKIDPSALVQKLELDVRS 60
Query: 61 VTSIRRGAEAKTILPKKEKMKLRREQCLQKIEAIKLAEQKHREERRRRATVVVGHLHPLR 120
VTSIRRGAEAKTILPKKEKMKLRREQCLQKIEAIKLAEQKHREERRRRATVVVGHLHPLR
Sbjct: 61 VTSIRRGAEAKTILPKKEKMKLRREQCLQKIEAIKLAEQKHREERRRRATVVVGHLHPLR 120
Query: 121 DALPELLGLEAGSRHQACSRESNKPWPSELSRMSAAQRQQLLEEGRTRFQELLSSPAYRA 180
DALPELLGLEAGSRHQACSRESNKPWPSELSRMSAAQRQQLLEEGRTRFQELLSSPAYRA
Sbjct: 121 DALPELLGLEAGSRHQACSRESNKPWPSELSRMSAAQRQQLLEEGRTRFQELLSSPAYRA 180
Query: 181 STLVAIGQTLARQMQLEDGGQL 202
STLVAIGQTLARQMQLEDGGQL
Sbjct: 181 STLVAIGQTLARQMQLEDGGQL 202
>gi|113427727 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 347 bits (890), Expect = 4e-96
Identities = 179/181 (98%), Positives = 180/181 (99%)
Query: 22 MLLEGLIRIIPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTILPKKEKMK 81
MLLEGLIRIIPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKT+LPKKEKMK
Sbjct: 1 MLLEGLIRIIPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMK 60
Query: 82 LRREQCLQKIEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSRHQACSRE 141
LRREQCLQKIEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSR QACSRE
Sbjct: 61 LRREQCLQKIEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSRRQACSRE 120
Query: 142 SNKPWPSELSRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQMQLEDGGQ 201
SNKPWPSELSRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQMQLEDGGQ
Sbjct: 121 SNKPWPSELSRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQMQLEDGGQ 180
Query: 202 L 202
L
Sbjct: 181 L 181
>gi|239752538 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 172
Score = 331 bits (849), Expect = 2e-91
Identities = 170/172 (98%), Positives = 171/172 (99%)
Query: 31 IPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTILPKKEKMKLRREQCLQK 90
IPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKT+LPKKEKMKLRREQCLQK
Sbjct: 1 IPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQCLQK 60
Query: 91 IEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSRHQACSRESNKPWPSEL 150
IEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSR QACSRESNKPWPSEL
Sbjct: 61 IEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSRRQACSRESNKPWPSEL 120
Query: 151 SRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQMQLEDGGQL 202
SRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQMQLEDGGQL
Sbjct: 121 SRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQMQLEDGGQL 172
>gi|169206039 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 312 bits (799), Expect = 1e-85
Identities = 166/176 (94%), Positives = 168/176 (95%)
Query: 27 LIRIIPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTILPKKEKMKLRREQ 86
LIRIIPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKT+LPKKEKMKLRREQ
Sbjct: 6 LIRIIPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQ 65
Query: 87 CLQKIEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSRHQACSRESNKPW 146
LQKIEAIKLAEQKHREERRRRATVVVG LHPLRDALPELLGLEAGSR Q SRESNKP
Sbjct: 66 WLQKIEAIKLAEQKHREERRRRATVVVGDLHPLRDALPELLGLEAGSRRQTRSRESNKPR 125
Query: 147 PSELSRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQMQLEDGGQL 202
PSELSRMSAAQRQQLLEE RTRFQELL+SPAYRAS LVAIGQTLARQMQLEDGGQL
Sbjct: 126 PSELSRMSAAQRQQLLEEERTRFQELLASPAYRASPLVAIGQTLARQMQLEDGGQL 181
>gi|113424287 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 312 bits (799), Expect = 1e-85
Identities = 166/176 (94%), Positives = 168/176 (95%)
Query: 27 LIRIIPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTILPKKEKMKLRREQ 86
LIRIIPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKT+LPKKEKMKLRREQ
Sbjct: 6 LIRIIPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQ 65
Query: 87 CLQKIEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSRHQACSRESNKPW 146
LQKIEAIKLAEQKHREERRRRATVVVG LHPLRDALPELLGLEAGSR Q SRESNKP
Sbjct: 66 WLQKIEAIKLAEQKHREERRRRATVVVGDLHPLRDALPELLGLEAGSRRQTRSRESNKPR 125
Query: 147 PSELSRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQMQLEDGGQL 202
PSELSRMSAAQRQQLLEE RTRFQELL+SPAYRAS LVAIGQTLARQMQLEDGGQL
Sbjct: 126 PSELSRMSAAQRQQLLEEERTRFQELLASPAYRASPLVAIGQTLARQMQLEDGGQL 181
>gi|113424103 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 312 bits (799), Expect = 1e-85
Identities = 166/176 (94%), Positives = 168/176 (95%)
Query: 27 LIRIIPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTILPKKEKMKLRREQ 86
LIRIIPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKT+LPKKEKMKLRREQ
Sbjct: 6 LIRIIPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTVLPKKEKMKLRREQ 65
Query: 87 CLQKIEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSRHQACSRESNKPW 146
LQKIEAIKLAEQKHREERRRRATVVVG LHPLRDALPELLGLEAGSR Q SRESNKP
Sbjct: 66 WLQKIEAIKLAEQKHREERRRRATVVVGDLHPLRDALPELLGLEAGSRRQTRSRESNKPR 125
Query: 147 PSELSRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQMQLEDGGQL 202
PSELSRMSAAQRQQLLEE RTRFQELL+SPAYRAS LVAIGQTLARQMQLEDGGQL
Sbjct: 126 PSELSRMSAAQRQQLLEEERTRFQELLASPAYRASPLVAIGQTLARQMQLEDGGQL 181
>gi|17158023 hypothetical protein LOC85395 [Homo sapiens]
Length = 230
Score = 290 bits (742), Expect = 6e-79
Identities = 160/184 (86%), Positives = 162/184 (88%), Gaps = 15/184 (8%)
Query: 34 FINTNIFARTKIDPSALVQKLELDVRSVTS---------------IRRGAEAKTILPKKE 78
FINTNIFARTKIDPSALVQKLELDVRSVTS IRRGAEAKT+LPKKE
Sbjct: 47 FINTNIFARTKIDPSALVQKLELDVRSVTSVRRGEAGSSARSVPSIRRGAEAKTVLPKKE 106
Query: 79 KMKLRREQCLQKIEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSRHQAC 138
KMKLRREQ LQKIEAIKLAEQKHREERRRRATVVVG LHPLRDALPELLGLEAGSR QA
Sbjct: 107 KMKLRREQWLQKIEAIKLAEQKHREERRRRATVVVGDLHPLRDALPELLGLEAGSRRQAR 166
Query: 139 SRESNKPWPSELSRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQMQLED 198
SRESNKP PSELSRMSAAQRQQLLEE RTRFQELL+SPAYRAS LVAIGQTLARQMQLED
Sbjct: 167 SRESNKPRPSELSRMSAAQRQQLLEEERTRFQELLASPAYRASPLVAIGQTLARQMQLED 226
Query: 199 GGQL 202
GGQL
Sbjct: 227 GGQL 230
>gi|109255230 centrosomal protein 170kDa isoform beta [Homo sapiens]
Length = 1486
Score = 40.0 bits (92), Expect = 0.001
Identities = 39/163 (23%), Positives = 64/163 (39%), Gaps = 16/163 (9%)
Query: 37 TNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTIL------PKKEKMKLRREQCLQK 90
T ++ + K D + K+ V T ++ G + KT+L P KEK + +E L K
Sbjct: 586 TQVYQKDKQDADRPLSKMNRAVNGET-LKTGGDNKTLLHLGSSAPGKEKSETDKETSLVK 644
Query: 91 IEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSRHQACSRESNKPWPSEL 150
KL +Q+ REE P + + + G R + +ES P +
Sbjct: 645 QTLAKLQQQEQREE---------AQWTPTKLSSKNVSGQTDKCREETFKQESQPPEKNSG 695
Query: 151 SRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQ 193
S R E R + +E+L S + ++L RQ
Sbjct: 696 HSTSKGDRVAQSESKRRKAEEILKSQTPKGGDKKESSKSLVRQ 738
>gi|109255228 centrosomal protein 170kDa isoform alpha [Homo
sapiens]
Length = 1584
Score = 40.0 bits (92), Expect = 0.001
Identities = 39/163 (23%), Positives = 64/163 (39%), Gaps = 16/163 (9%)
Query: 37 TNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTIL------PKKEKMKLRREQCLQK 90
T ++ + K D + K+ V T ++ G + KT+L P KEK + +E L K
Sbjct: 684 TQVYQKDKQDADRPLSKMNRAVNGET-LKTGGDNKTLLHLGSSAPGKEKSETDKETSLVK 742
Query: 91 IEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSRHQACSRESNKPWPSEL 150
KL +Q+ REE P + + + G R + +ES P +
Sbjct: 743 QTLAKLQQQEQREE---------AQWTPTKLSSKNVSGQTDKCREETFKQESQPPEKNSG 793
Query: 151 SRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQ 193
S R E R + +E+L S + ++L RQ
Sbjct: 794 HSTSKGDRVAQSESKRRKAEEILKSQTPKGGDKKESSKSLVRQ 836
>gi|109255232 centrosomal protein 170kDa isoform gamma [Homo
sapiens]
Length = 1460
Score = 40.0 bits (92), Expect = 0.001
Identities = 39/163 (23%), Positives = 64/163 (39%), Gaps = 16/163 (9%)
Query: 37 TNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTIL------PKKEKMKLRREQCLQK 90
T ++ + K D + K+ V T ++ G + KT+L P KEK + +E L K
Sbjct: 586 TQVYQKDKQDADRPLSKMNRAVNGET-LKTGGDNKTLLHLGSSAPGKEKSETDKETSLVK 644
Query: 91 IEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSRHQACSRESNKPWPSEL 150
KL +Q+ REE P + + + G R + +ES P +
Sbjct: 645 QTLAKLQQQEQREE---------AQWTPTKLSSKNVSGQTDKCREETFKQESQPPEKNSG 695
Query: 151 SRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQ 193
S R E R + +E+L S + ++L RQ
Sbjct: 696 HSTSKGDRVAQSESKRRKAEEILKSQTPKGGDKKESSKSLVRQ 738
>gi|194294519 nuclear receptor subfamily 1, group H, member 3
isoform c [Homo sapiens]
Length = 402
Score = 33.5 bits (75), Expect = 0.13
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 12/89 (13%)
Query: 84 REQCLQKIEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAG------SRHQA 137
RE+C+ E I+L + K +EE + AT + LP+L + G + Q
Sbjct: 119 REECVLSEEQIRLKKLKRQEEEQAHATSLPPRASSPPQILPQLSPEQLGMIEKLVAAQQQ 178
Query: 138 CSRESNK------PWPSELSRMSAAQRQQ 160
C+R S PWP S RQQ
Sbjct: 179 CNRRSFSDRLRVTPWPMAPDPHSREARQQ 207
>gi|194294517 nuclear receptor subfamily 1, group H, member 3
isoform a [Homo sapiens]
Length = 447
Score = 33.5 bits (75), Expect = 0.13
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 12/89 (13%)
Query: 84 REQCLQKIEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAG------SRHQA 137
RE+C+ E I+L + K +EE + AT + LP+L + G + Q
Sbjct: 164 REECVLSEEQIRLKKLKRQEEEQAHATSLPPRASSPPQILPQLSPEQLGMIEKLVAAQQQ 223
Query: 138 CSRESNK------PWPSELSRMSAAQRQQ 160
C+R S PWP S RQQ
Sbjct: 224 CNRRSFSDRLRVTPWPMAPDPHSREARQQ 252
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 32.7 bits (73), Expect = 0.22
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 55 ELDVRSVTSIRRGAEAKTILPKKEKMKLRREQCLQKIEAIKLAEQKHREERRRR 108
E +R +RR + + + + +LRREQ L++ + + EQKH +ERR +
Sbjct: 392 EQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQEEERHEQKHEQERREQ 445
Score = 31.6 bits (70), Expect = 0.48
Identities = 27/121 (22%), Positives = 52/121 (42%), Gaps = 8/121 (6%)
Query: 53 KLELDVRSVTSIRRGAEAKTILPKKEKMKLRREQCLQKIEAIKLAEQKHREERRRRATVV 112
KLE + R RR + + ++ + +L+R++ ++++ +EQ+ R E+ R +
Sbjct: 490 KLEEEERREQQERREQQLRREQEERREQRLKRQEEEERLQQRLRSEQQLRREQEERREQL 549
Query: 113 VGHLHPLRDALPELLGLEAGSRHQACSRESNKPWPSELSRMSAAQRQQLLEEGRTRFQEL 172
+ R LE R Q RE + L R ++Q+L E R ++
Sbjct: 550 LKREEEKR--------LEQERREQRLKREQEERRDQLLKREEERRQQRLKREQEERLEQR 601
Query: 173 L 173
L
Sbjct: 602 L 602
Score = 30.8 bits (68), Expect = 0.82
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 2/122 (1%)
Query: 52 QKLELDVRSVTSIRRGAEAKTILPKKEKMKLRREQCLQKIEAIKLAEQKHREERRRRATV 111
++ E +R +RR + + + + +LRREQ L++ + ++ +Q RE++ RR
Sbjct: 371 ERREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQE 430
Query: 112 VVGHLHP-LRDALPELLGLEAGSRHQACSRESNKPWPSELSRMSAAQRQQLLEEGRTRFQ 170
H ++ + L E R RE + R +R Q EE R R+
Sbjct: 431 EERHEQKHEQERREQRLKREQEERRDWLKREEETERHEQERRKQQLKRDQ-EEERRERWL 489
Query: 171 EL 172
+L
Sbjct: 490 KL 491
Score = 30.8 bits (68), Expect = 0.82
Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 6/143 (4%)
Query: 55 ELDVRSVTSIRRGAEAKTILPK-KEKMKLRREQCLQKIEAIKLAEQKHREERRRRATVVV 113
E + R ++R E + + + + + +LRREQ ++ + +K E+K E+ RR +
Sbjct: 510 EQEERREQRLKRQEEEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQERREQRL-- 567
Query: 114 GHLHPLRDALPELLGLEAGSRHQACSRESNKPWPSELSRMSAAQRQQLLEEGRTRFQELL 173
+ +LL E R Q RE + L R +R + E R +
Sbjct: 568 --KREQEERRDQLLKREEERRQQRLKREQEERLEQRLKR-EEVERLEQEERREQRLKREE 624
Query: 174 SSPAYRASTLVAIGQTLARQMQL 196
R L + Q RQ QL
Sbjct: 625 PEEERRQQLLKSEEQEERRQQQL 647
Score = 30.4 bits (67), Expect = 1.1
Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 7/155 (4%)
Query: 51 VQKLELDVRSVTSIRRGA---EAKTILPKKEKMKLRREQCLQKIEAIKLAEQKHREERRR 107
V++LE + R ++R E + L K E+ + RR+Q L++ + + ++ REE
Sbjct: 607 VERLEQEERREQRLKREEPEEERRQQLLKSEEQEERRQQQLRREQQERREQRLKREEEEE 666
Query: 108 RATVVVGHLHPLRDALPELLGLE-AGSRHQACSRESNKPWPSEL---SRMSAAQRQQLLE 163
R + H EL E +R + SR W E +R S + +
Sbjct: 667 RLEQRLKREHEEERREQELAEEEQEQARERIKSRIPKWQWQLESEADARQSKVYSRPRKQ 726
Query: 164 EGRTRFQELLSSPAYRASTLVAIGQTLARQMQLED 198
EG+ R QE R S L + A + Q E+
Sbjct: 727 EGQRRRQEQEEKRRRRESELQWQEEERAHRQQQEE 761
Score = 30.4 bits (67), Expect = 1.1
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 20/119 (16%)
Query: 59 RSVTSIRRGAEAKTILPKKEKMKLRREQCLQKIEAIKLAEQKHREERRRRATVVVGHLHP 118
R + + R + LP++E+ + RR Q ++ + ++ E++ + +RR RA L
Sbjct: 796 RQLRAEERQQREQRFLPEEEEKEQRRRQRREREKELQFLEEEEQLQRRERAQ----QLQE 851
Query: 119 LRDALPELLGLEAGSRHQACSRESNKPWPSELSRMSAAQRQQLLEEGRTRFQELLSSPA 177
D L E R ++ + ++ W R QL EE + R L + PA
Sbjct: 852 EEDGLQ-----EDQERRRSQEQRRDQKW-----------RWQLEEERKRRRHTLYAKPA 894
Score = 28.1 bits (61), Expect = 5.3
Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 11/129 (8%)
Query: 76 KKEKMKLRREQCLQKIEAIKLAEQ--KHREERRRRATVVVGHLHPLRDALPELLGLEAGS 133
++++ +LRREQ L++ + + EQ + RE++ RR LR E
Sbjct: 294 EQQQQRLRREQQLRRKQEEERREQQEERREQQERREQQEERREQQLRREQEE-------R 346
Query: 134 RHQACSRESNKPWPSELSRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQ 193
R Q RE + + ++ Q ++ E+ R Q+L R + Q L R+
Sbjct: 347 REQQLRREQEEERREQ--QLRREQEEERREQQLRREQQLRREQQLRREQQLRREQQLRRE 404
Query: 194 MQLEDGGQL 202
QL QL
Sbjct: 405 QQLRREQQL 413
Score = 27.7 bits (60), Expect = 6.9
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 52 QKLELDVRSVTSIRRGAEAKTIL---PKKEKMKLRREQCLQKIEAIKLAEQKHREERRRR 108
Q+LE R +++ E + +L P+K + + R QC ++ E + EQ REER +R
Sbjct: 1074 QELERQYRKEEELQQ--EEEQLLREEPEKRRRQERERQCREEEELQQEEEQLLREEREKR 1131
>gi|23397678 signal transducer and activator of transcription 6
[Homo sapiens]
Length = 847
Score = 32.3 bits (72), Expect = 0.28
Identities = 36/118 (30%), Positives = 49/118 (41%), Gaps = 25/118 (21%)
Query: 107 RRATVVVGHLHPLRDALPELLGLEAG--SRHQACSRESNKPWPSE--------------- 149
RR VG +H LR+AL + G EAG S H +N PSE
Sbjct: 135 RRLQHRVGEIHLLREALQK--GAEAGQVSLHSLIETPANGTGPSEALAMLLQETTGELEA 192
Query: 150 -----LSRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQMQLEDGGQL 202
L R+ +RQQ L F+E L+ R +LV I L +++ GG+L
Sbjct: 193 AKALVLKRIQIWKRQQQLAGNGAPFEESLAPLQERCESLVDIYSQLQQEVGAA-GGEL 249
>gi|19923191 minichromosome maintenance complex component 3 associated
protein [Homo sapiens]
Length = 1980
Score = 30.8 bits (68), Expect = 0.82
Identities = 30/123 (24%), Positives = 46/123 (37%), Gaps = 26/123 (21%)
Query: 99 QKHREERRRRATVVVGHLHPLRDALP-ELLGLEAG-SRHQACSRESNKPWPSELSRMSAA 156
Q +E + R + + HP + P LL + R C++E P +L R ++A
Sbjct: 1798 QTQKELQLREGRLAIKPFHPSANNFPIPLLHMHRNWKRSTECAQEGRIPSTEDLMRGASA 1857
Query: 157 ------------------------QRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLAR 192
Q QQ L E F +L S P Y TLV++ T+
Sbjct: 1858 EELLAQCLSSSLLLEKEENKRFEDQLQQWLSEDSGAFTDLTSLPLYLPQTLVSLSHTIEP 1917
Query: 193 QMQ 195
M+
Sbjct: 1918 VMK 1920
>gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sapiens]
Length = 1293
Score = 30.4 bits (67), Expect = 1.1
Identities = 36/170 (21%), Positives = 67/170 (39%), Gaps = 28/170 (16%)
Query: 59 RSVTSIRRGAEAKTILPKKEKMKLRREQCLQKIEAIKLAEQKHREERRRRATVVVGHLHP 118
R +R E + ++E +LR E+ +K + +++ QK +R++ + L
Sbjct: 846 REEEEAQRRLEENRLRMEEEAARLRHEEEERKRKELEVQRQKELMRQRQQQQEALRRLQQ 905
Query: 119 LRDA-------LPELLGLEAGSRHQACSRESNKPWPSELSRMSAAQRQQLLEEGRTRFQE 171
+ LP S AC ++ +E+ ++ + +QL EE R + +E
Sbjct: 906 QQQQQQLAQMKLPSSSTWGQQSNTTACQSQATLSL-AEIQKLEEERERQLREEQRRQQRE 964
Query: 172 LL--------------------SSPAYRASTLVAIGQTLARQMQLEDGGQ 201
L+ S P+ +L+ I Q ARQMQ + Q
Sbjct: 965 LMKALQQQQQQQQQKLSGWGNVSKPSGTTKSLLEIQQEEARQMQKQQQQQ 1014
>gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sapiens]
Length = 1320
Score = 30.4 bits (67), Expect = 1.1
Identities = 36/170 (21%), Positives = 67/170 (39%), Gaps = 28/170 (16%)
Query: 59 RSVTSIRRGAEAKTILPKKEKMKLRREQCLQKIEAIKLAEQKHREERRRRATVVVGHLHP 118
R +R E + ++E +LR E+ +K + +++ QK +R++ + L
Sbjct: 873 REEEEAQRRLEENRLRMEEEAARLRHEEEERKRKELEVQRQKELMRQRQQQQEALRRLQQ 932
Query: 119 LRDA-------LPELLGLEAGSRHQACSRESNKPWPSELSRMSAAQRQQLLEEGRTRFQE 171
+ LP S AC ++ +E+ ++ + +QL EE R + +E
Sbjct: 933 QQQQQQLAQMKLPSSSTWGQQSNTTACQSQATLSL-AEIQKLEEERERQLREEQRRQQRE 991
Query: 172 LL--------------------SSPAYRASTLVAIGQTLARQMQLEDGGQ 201
L+ S P+ +L+ I Q ARQMQ + Q
Sbjct: 992 LMKALQQQQQQQQQKLSGWGNVSKPSGTTKSLLEIQQEEARQMQKQQQQQ 1041
>gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sapiens]
Length = 1299
Score = 30.4 bits (67), Expect = 1.1
Identities = 36/170 (21%), Positives = 67/170 (39%), Gaps = 28/170 (16%)
Query: 59 RSVTSIRRGAEAKTILPKKEKMKLRREQCLQKIEAIKLAEQKHREERRRRATVVVGHLHP 118
R +R E + ++E +LR E+ +K + +++ QK +R++ + L
Sbjct: 852 REEEEAQRRLEENRLRMEEEAARLRHEEEERKRKELEVQRQKELMRQRQQQQEALRRLQQ 911
Query: 119 LRDA-------LPELLGLEAGSRHQACSRESNKPWPSELSRMSAAQRQQLLEEGRTRFQE 171
+ LP S AC ++ +E+ ++ + +QL EE R + +E
Sbjct: 912 QQQQQQLAQMKLPSSSTWGQQSNTTACQSQATLSL-AEIQKLEEERERQLREEQRRQQRE 970
Query: 172 LL--------------------SSPAYRASTLVAIGQTLARQMQLEDGGQ 201
L+ S P+ +L+ I Q ARQMQ + Q
Sbjct: 971 LMKALQQQQQQQQQKLSGWGNVSKPSGTTKSLLEIQQEEARQMQKQQQQQ 1020
>gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapiens]
Length = 1299
Score = 30.4 bits (67), Expect = 1.1
Identities = 36/170 (21%), Positives = 67/170 (39%), Gaps = 28/170 (16%)
Query: 59 RSVTSIRRGAEAKTILPKKEKMKLRREQCLQKIEAIKLAEQKHREERRRRATVVVGHLHP 118
R +R E + ++E +LR E+ +K + +++ QK +R++ + L
Sbjct: 852 REEEEAQRRLEENRLRMEEEAARLRHEEEERKRKELEVQRQKELMRQRQQQQEALRRLQQ 911
Query: 119 LRDA-------LPELLGLEAGSRHQACSRESNKPWPSELSRMSAAQRQQLLEEGRTRFQE 171
+ LP S AC ++ +E+ ++ + +QL EE R + +E
Sbjct: 912 QQQQQQLAQMKLPSSSTWGQQSNTTACQSQATLSL-AEIQKLEEERERQLREEQRRQQRE 970
Query: 172 LL--------------------SSPAYRASTLVAIGQTLARQMQLEDGGQ 201
L+ S P+ +L+ I Q ARQMQ + Q
Sbjct: 971 LMKALQQQQQQQQQKLSGWGNVSKPSGTTKSLLEIQQEEARQMQKQQQQQ 1020
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 30.4 bits (67), Expect = 1.1
Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 5/131 (3%)
Query: 42 RTKIDPSALVQKLELDVRSVTSIRRGAEAKTILPKKEKMKLRREQCLQKIEAIKLAEQKH 101
R + + + V KL+ +V SVT + AE K I K+ L + LQ + + E +
Sbjct: 1273 RARAELNDKVHKLQNEVESVTGMLNEAEGKAIKLAKDVASLSSQ--LQDTQELLQEETRQ 1330
Query: 102 REERRRRATVVVGHLHPLRDALPELLGLEAG-SRHQACSRESNKPWPSELSRMSAAQRQQ 160
+ + + + L+D L E + + RH S + + S+ A +
Sbjct: 1331 KLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERH--ISTLNIQLSDSKKKLQDFASTVE 1388
Query: 161 LLEEGRTRFQE 171
LEEG+ RFQ+
Sbjct: 1389 ALEEGKKRFQK 1399
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 30.4 bits (67), Expect = 1.1
Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 5/131 (3%)
Query: 42 RTKIDPSALVQKLELDVRSVTSIRRGAEAKTILPKKEKMKLRREQCLQKIEAIKLAEQKH 101
R + + + V KL+ +V SVT + AE K I K+ L + LQ + + E +
Sbjct: 1280 RARAELNDKVHKLQNEVESVTGMLNEAEGKAIKLAKDVASLSSQ--LQDTQELLQEETRQ 1337
Query: 102 REERRRRATVVVGHLHPLRDALPELLGLEAG-SRHQACSRESNKPWPSELSRMSAAQRQQ 160
+ + + + L+D L E + + RH S + + S+ A +
Sbjct: 1338 KLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERH--ISTLNIQLSDSKKKLQDFASTVE 1395
Query: 161 LLEEGRTRFQE 171
LEEG+ RFQ+
Sbjct: 1396 ALEEGKKRFQK 1406
>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
sapiens]
Length = 1945
Score = 30.4 bits (67), Expect = 1.1
Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 5/131 (3%)
Query: 42 RTKIDPSALVQKLELDVRSVTSIRRGAEAKTILPKKEKMKLRREQCLQKIEAIKLAEQKH 101
R + + + V KL+ +V SVT + AE K I K+ L + LQ + + E +
Sbjct: 1280 RARAELNDKVHKLQNEVESVTGMLNEAEGKAIKLAKDVASLSSQ--LQDTQELLQEETRQ 1337
Query: 102 REERRRRATVVVGHLHPLRDALPELLGLEAG-SRHQACSRESNKPWPSELSRMSAAQRQQ 160
+ + + + L+D L E + + RH S + + S+ A +
Sbjct: 1338 KLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERH--ISTLNIQLSDSKKKLQDFASTVE 1395
Query: 161 LLEEGRTRFQE 171
LEEG+ RFQ+
Sbjct: 1396 ALEEGKKRFQK 1406
>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
sapiens]
Length = 1938
Score = 30.4 bits (67), Expect = 1.1
Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 5/131 (3%)
Query: 42 RTKIDPSALVQKLELDVRSVTSIRRGAEAKTILPKKEKMKLRREQCLQKIEAIKLAEQKH 101
R + + + V KL+ +V SVT + AE K I K+ L + LQ + + E +
Sbjct: 1273 RARAELNDKVHKLQNEVESVTGMLNEAEGKAIKLAKDVASLSSQ--LQDTQELLQEETRQ 1330
Query: 102 REERRRRATVVVGHLHPLRDALPELLGLEAG-SRHQACSRESNKPWPSELSRMSAAQRQQ 160
+ + + + L+D L E + + RH S + + S+ A +
Sbjct: 1331 KLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERH--ISTLNIQLSDSKKKLQDFASTVE 1388
Query: 161 LLEEGRTRFQE 171
LEEG+ RFQ+
Sbjct: 1389 ALEEGKKRFQK 1399
>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
[Homo sapiens]
Length = 918
Score = 30.4 bits (67), Expect = 1.1
Identities = 35/158 (22%), Positives = 72/158 (45%), Gaps = 22/158 (13%)
Query: 30 IIPPFINTNIFARTKIDPSALVQKLELDVRSVTSIRRGAEAKTILPKK---------EKM 80
++ FI N R +DP +E + + + ++RR EA+ + +K E++
Sbjct: 515 VMKSFIKRNTPLR--MDPKCSF--VEKERQRLENLRRKEEAEQLRRQKVEEDKRRRLEEV 570
Query: 81 KLRREQCLQKIEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEAGSRHQACSR 140
KL+RE+ L+K+ + ++ +EE++++ + + E E ++ +A ++
Sbjct: 571 KLKREERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAK 630
Query: 141 -----ESNKPWPSELSRMSAAQRQQLLEEGRTRFQELL 173
E+ + E R+ Q+ EE R QELL
Sbjct: 631 KMEEVEARRKQEEEARRLRWLQQ----EEEERRHQELL 664
Score = 28.5 bits (62), Expect = 4.1
Identities = 14/46 (30%), Positives = 28/46 (60%)
Query: 64 IRRGAEAKTILPKKEKMKLRREQCLQKIEAIKLAEQKHREERRRRA 109
+R+ AEAK + ++E+ + +E+ Q+ + EQ+ RE+ R+ A
Sbjct: 675 LRKAAEAKRLAEQREQERREQERREQERREQERREQERREQERQLA 720
>gi|166795299 solute carrier family 2 (facilitated glucose
transporter), member 1 [Homo sapiens]
Length = 492
Score = 30.0 bits (66), Expect = 1.4
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 157 QRQQLLEEGRTRFQELLSSPAYRASTLVAIGQTLARQM 194
+ +Q++ E + EL SPAYR L+A+ L++Q+
Sbjct: 247 ESRQMMREKKVTILELFRSPAYRQPILIAVVLQLSQQL 284
>gi|23238200 RELT tumor necrosis factor receptor precursor [Homo
sapiens]
Length = 430
Score = 30.0 bits (66), Expect = 1.4
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 73 ILPKKEKMKLRREQCLQKIEAIKLAEQKHRE-ERRRRATVVVGHLHPLRDALPELLGLEA 131
++ +K++ E+ L++ + +L + HR + A V H+ P R L + GL A
Sbjct: 230 LITEKKENAAALEELLKEYHSKQLVQTSHRPVSKLPPAPPNVPHICPHRHHLHTVQGL-A 288
Query: 132 GSRHQACSRESNKPWPSEL 150
CSR S K WP L
Sbjct: 289 SLSGPCCSRCSQKKWPEVL 307
>gi|21361873 RELT tumor necrosis factor receptor precursor [Homo
sapiens]
Length = 430
Score = 30.0 bits (66), Expect = 1.4
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 73 ILPKKEKMKLRREQCLQKIEAIKLAEQKHRE-ERRRRATVVVGHLHPLRDALPELLGLEA 131
++ +K++ E+ L++ + +L + HR + A V H+ P R L + GL A
Sbjct: 230 LITEKKENAAALEELLKEYHSKQLVQTSHRPVSKLPPAPPNVPHICPHRHHLHTVQGL-A 288
Query: 132 GSRHQACSRESNKPWPSEL 150
CSR S K WP L
Sbjct: 289 SLSGPCCSRCSQKKWPEVL 307
>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
[Homo sapiens]
Length = 914
Score = 29.6 bits (65), Expect = 1.8
Identities = 29/133 (21%), Positives = 62/133 (46%), Gaps = 18/133 (13%)
Query: 55 ELDVRSVTSIRRGAEAKTILPKK---------EKMKLRREQCLQKIEAIKLAEQKHREER 105
E + + + ++RR EA+ + +K E++KL+RE+ L+K+ + ++ +EE+
Sbjct: 532 EKERQRLENLRRKEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEK 591
Query: 106 RRRATVVVGHLHPLRDALPELLGLEAGSRHQACSR-----ESNKPWPSELSRMSAAQRQQ 160
+++ + + E E ++ +A ++ E+ + E R+ Q+
Sbjct: 592 KKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQ-- 649
Query: 161 LLEEGRTRFQELL 173
EE R QELL
Sbjct: 650 --EEEERRHQELL 660
Score = 28.5 bits (62), Expect = 4.1
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 77 KEKMKLRREQCLQKIEAIKLAEQKHREERRRR 108
KEK + R E +K EA +L QK E++RRR
Sbjct: 531 KEKERQRLENLRRKEEAEQLRRQKVEEDKRRR 562
Score = 28.5 bits (62), Expect = 4.1
Identities = 14/46 (30%), Positives = 28/46 (60%)
Query: 64 IRRGAEAKTILPKKEKMKLRREQCLQKIEAIKLAEQKHREERRRRA 109
+R+ AEAK + ++E+ + +E+ Q+ + EQ+ RE+ R+ A
Sbjct: 671 LRKAAEAKRLAEQREQERREQERREQERREQERREQERREQERQLA 716
>gi|21483182 zinc finger with KRAB and SCAN domains 5 [Homo sapiens]
Length = 839
Score = 29.6 bits (65), Expect = 1.8
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 9/114 (7%)
Query: 72 TILPKKEKMKLRREQCLQKIEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEA 131
TILP++ + +R EA+ + E RE RR +V D LP +
Sbjct: 100 TILPEEFQPWVREHHPESGEEAVAVIENIQRELEERRQQIVA-----CPDVLPRKMA-TP 153
Query: 132 GSRHQACSRESNKPWPSELSRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVA 185
G+ ++CS P + A Q+ +LLEE ++ S P + L A
Sbjct: 154 GAVQESCSPH---PLTVDTQPEQAPQKPRLLEENALPVLQVPSLPLKDSQELTA 204
>gi|11036642 zinc finger with KRAB and SCAN domains 5 [Homo sapiens]
Length = 839
Score = 29.6 bits (65), Expect = 1.8
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 9/114 (7%)
Query: 72 TILPKKEKMKLRREQCLQKIEAIKLAEQKHREERRRRATVVVGHLHPLRDALPELLGLEA 131
TILP++ + +R EA+ + E RE RR +V D LP +
Sbjct: 100 TILPEEFQPWVREHHPESGEEAVAVIENIQRELEERRQQIVA-----CPDVLPRKMA-TP 153
Query: 132 GSRHQACSRESNKPWPSELSRMSAAQRQQLLEEGRTRFQELLSSPAYRASTLVA 185
G+ ++CS P + A Q+ +LLEE ++ S P + L A
Sbjct: 154 GAVQESCSPH---PLTVDTQPEQAPQKPRLLEENALPVLQVPSLPLKDSQELTA 204
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,323,212
Number of Sequences: 37866
Number of extensions: 295667
Number of successful extensions: 1597
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 84
Number of HSP's that attempted gapping in prelim test: 1478
Number of HSP's gapped (non-prelim): 201
length of query: 202
length of database: 18,247,518
effective HSP length: 97
effective length of query: 105
effective length of database: 14,574,516
effective search space: 1530324180
effective search space used: 1530324180
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.