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Search of human proteins with 169211815
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
sapiens]
(288 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap... 567 e-162
gi|239745807 PREDICTED: keratin associated protein 4-9 [Homo sap... 273 1e-73
gi|19111150 angiomotin isoform 2 [Homo sapiens] 81 9e-16
gi|166064029 angiomotin isoform 1 [Homo sapiens] 81 9e-16
gi|110832843 TBP-associated factor 4 [Homo sapiens] 79 5e-15
gi|156071476 hypothetical protein LOC401137 [Homo sapiens] 77 2e-14
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 76 3e-14
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 74 2e-13
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 73 3e-13
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 73 3e-13
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 72 7e-13
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 72 7e-13
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 71 1e-12
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 70 2e-12
gi|116256363 transmembrane protease, serine 13 [Homo sapiens] 70 2e-12
gi|146134388 YLP motif containing 1 [Homo sapiens] 67 1e-11
gi|210032509 hypothetical protein LOC100130302 [Homo sapiens] 66 3e-11
gi|163965366 nascent polypeptide-associated complex alpha subuni... 66 4e-11
gi|24497554 homeobox A13 [Homo sapiens] 65 9e-11
gi|239752265 PREDICTED: hypothetical protein XP_002348186 [Homo ... 64 2e-10
gi|4758392 forkhead box D1 [Homo sapiens] 62 4e-10
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 62 8e-10
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 62 8e-10
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 62 8e-10
gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo ... 62 8e-10
gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo ... 62 8e-10
gi|55743106 alpha 3 type VI collagen isoform 5 precursor [Homo s... 58 8e-09
gi|55743098 alpha 3 type VI collagen isoform 1 precursor [Homo s... 58 8e-09
gi|240255535 alpha 3 type VI collagen isoform 4 precursor [Homo ... 58 8e-09
gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo ... 57 1e-08
>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
sapiens]
Length = 288
Score = 567 bits (1462), Expect = e-162
Identities = 288/288 (100%), Positives = 288/288 (100%)
Query: 1 MAFELTAFQLIDTCISPLEILAQSEALPKRYHDEKQTSDSGPPMSHDTQRLKSCDTETKE 60
MAFELTAFQLIDTCISPLEILAQSEALPKRYHDEKQTSDSGPPMSHDTQRLKSCDTETKE
Sbjct: 1 MAFELTAFQLIDTCISPLEILAQSEALPKRYHDEKQTSDSGPPMSHDTQRLKSCDTETKE 60
Query: 61 RKTRGDSCGNTRNLYPLTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAV 120
RKTRGDSCGNTRNLYPLTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAV
Sbjct: 61 RKTRGDSCGNTRNLYPLTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAV 120
Query: 121 CPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAAS 180
CPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAAS
Sbjct: 121 CPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAAS 180
Query: 181 PLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAA 240
PLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAA
Sbjct: 181 PLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAA 240
Query: 241 RAAAAPAAACVQSVAESPATPLAIAQPVSFPPAPVPCAVPPLAAELLA 288
RAAAAPAAACVQSVAESPATPLAIAQPVSFPPAPVPCAVPPLAAELLA
Sbjct: 241 RAAAAPAAACVQSVAESPATPLAIAQPVSFPPAPVPCAVPPLAAELLA 288
>gi|239745807 PREDICTED: keratin associated protein 4-9 [Homo
sapiens]
Length = 254
Score = 273 bits (699), Expect = 1e-73
Identities = 157/199 (78%), Positives = 159/199 (79%), Gaps = 19/199 (9%)
Query: 97 RPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGP 156
RPAAAPAAVRPPAAGPPAAAPA V PAAA PSAASLCAA+P VPA PAAVRPP AGP
Sbjct: 16 RPAAAPAAVRPPAAGPPAAAPAVVYPAAAGPSAASLCAANP--LVPA--PAAVRPPVAGP 71
Query: 157 PAAALAAVYPAAADPSAASLCAASPLAAVPA----------AASPAAVAPAAVCPGAAGP 206
PA A A V PAAA PSAASL AA+PLA PA AASPAAVAPAAVCP AA P
Sbjct: 72 PATAPAVVCPAAAGPSAASLRAANPLAVAPAAVRRPAATLGAASPAAVAPAAVCPAAASP 131
Query: 207 SAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQ 266
SAASLCAAS AA PAAASPAAAAPLAVNP AAAAPAAACVQSVAESPATPLAIAQ
Sbjct: 132 SAASLCAASPTAAAPAAASPAAAAPLAVNP-----AAAAPAAACVQSVAESPATPLAIAQ 186
Query: 267 PVSFPPAPVPCAVPPLAAE 285
PVS P AP PCAVPPLAAE
Sbjct: 187 PVSSPAAPAPCAVPPLAAE 205
Score = 166 bits (420), Expect = 2e-41
Identities = 107/180 (59%), Positives = 116/180 (64%), Gaps = 14/180 (7%)
Query: 79 PWSAPVVV------PSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASL 132
P +AP VV PSA + A APAAVRPP AGPPA APA VCPAAA PSAASL
Sbjct: 32 PAAAPAVVYPAAAGPSAASLCAANPLVPAPAAVRPPVAGPPATAPAVVCPAAAGPSAASL 91
Query: 133 CAASPPAAVPAAV--PAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAAS 190
AA+P A PAAV PAA AA P A A AAV PAAA PSAASLCAASP AA PAAAS
Sbjct: 92 RAANPLAVAPAAVRRPAATLG-AASPAAVAPAAVCPAAASPSAASLCAASPTAAAPAAAS 150
Query: 191 PAAVAPAAVCPGAAGPSAASLCAASQPAAVPAA-----ASPAAAAPLAVNPAAAARAAAA 245
PAA AP AV P AA P+AA + + ++ A P A +SPAA AP AV P AA A A
Sbjct: 151 PAAAAPLAVNPAAAAPAAACVQSVAESPATPLAIAQPVSSPAAPAPCAVPPLAAEPTALA 210
Score = 97.4 bits (241), Expect = 1e-20
Identities = 72/155 (46%), Positives = 81/155 (52%), Gaps = 34/155 (21%)
Query: 79 PWSAPVVV------PSALTRAVAWRPAAAPAAVRPPAA-----GPPAAAPAAVCPAAADP 127
P +AP VV PSA + A A APAAVR PAA P A APAAVCPAAA P
Sbjct: 72 PATAPAVVCPAAAGPSAASLRAANPLAVAPAAVRRPAATLGAASPAAVAPAAVCPAAASP 131
Query: 128 SAASLCAASPPAAVPAAV------PAAVRPPAAGPPAAALAAVYPAAA----------DP 171
SAASLCAASP AA PAA P AV P AA P AA + +V + A P
Sbjct: 132 SAASLCAASPTAAAPAAASPAAAAPLAVNPAAAAPAAACVQSVAESPATPLAIAQPVSSP 191
Query: 172 SAASLCAASPLAAVPAAAS-------PAAVAPAAV 199
+A + CA PLAA P A + P V P+ V
Sbjct: 192 AAPAPCAVPPLAAEPTALAYLPLHHWPTDVDPSTV 226
>gi|19111150 angiomotin isoform 2 [Homo sapiens]
Length = 675
Score = 81.3 bits (199), Expect = 9e-16
Identities = 68/183 (37%), Positives = 85/183 (46%), Gaps = 16/183 (8%)
Query: 103 AAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPPAAALA 162
AAV P + P AA A AAA + A+ + AA P AV AA P AA P+ A A
Sbjct: 467 AAVAPISVPAPVAAAAT---AAAITATAATITTTMVAAAPVAVAAAAAPAAAAAPSPATA 523
Query: 163 AVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPS---AASLCAASQPAA 219
A AA P+AA A+ A AA +P+A A AAV A P+ A +L PAA
Sbjct: 524 AATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPAA 583
Query: 220 VPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFPPAPVPCAV 279
A+A AP + PA A A P A Q AE PA+P + P P ++
Sbjct: 584 AQASAPAQTQAPTSA-PAVAPTPAPTPTPAVAQ--AEVPASP-------ATGPGPHRLSI 633
Query: 280 PPL 282
P L
Sbjct: 634 PSL 636
Score = 77.0 bits (188), Expect = 2e-14
Identities = 60/152 (39%), Positives = 73/152 (48%), Gaps = 6/152 (3%)
Query: 134 AASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAA 193
AA P +VPA V AA A AA + AAA P A + AA AA P+ A+ AA
Sbjct: 467 AAVAPISVPAPVAAAATAAAITATAATITTTMVAAA-PVAVAAAAAPAAAAAPSPATAAA 525
Query: 194 VAPAAVCPGAAG--PSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACV 251
A AAV P AAG P+AAS+ +A+ A AAA+ AP A P A PA A
Sbjct: 526 TA-AAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPAAA 584
Query: 252 QSVAESPATPLAIAQPVSFPPAPVPCAVPPLA 283
Q A +PA A + P P P P +A
Sbjct: 585 Q--ASAPAQTQAPTSAPAVAPTPAPTPTPAVA 614
Score = 75.9 bits (185), Expect = 4e-14
Identities = 66/182 (36%), Positives = 84/182 (46%), Gaps = 25/182 (13%)
Query: 99 AAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPPA 158
A AP +V P A AAA AA A A ++ AA+P A AA PAA P+ A
Sbjct: 468 AVAPISVPAPVA---AAATAAAITATAATITTTMVAAAPVAVAAAAAPAAAAAPSPATAA 524
Query: 159 AALAAVYPAAAD--PSAASLCAASPLAAVPAAASPAAVAPAAVCPGAA-------GPSAA 209
A AAV PAAA P+AAS+ +A+ +A AAA+ VAPAA P A P+AA
Sbjct: 525 ATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPAAA 584
Query: 210 SLCAASQ-------PAAVPA-AASPAAAAPLAVNPAAAA-----RAAAAPAAACVQSVAE 256
A +Q PA P A +P A A PA+ A + P+ C +
Sbjct: 585 QASAPAQTQAPTSAPAVAPTPAPTPTPAVAQAEVPASPATGPGPHRLSIPSLTCNPDKTD 644
Query: 257 SP 258
P
Sbjct: 645 GP 646
Score = 61.2 bits (147), Expect = 1e-09
Identities = 55/181 (30%), Positives = 74/181 (40%), Gaps = 28/181 (15%)
Query: 112 PPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADP 171
P P+ +A + + C+ + AAV P + P AA A
Sbjct: 432 PSPVPPSTPLLSAHSKTGSRDCSTQTERGTESNKTAAVAPISVPAPVAAAAT-------- 483
Query: 172 SAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAP 231
+AA A+ + AA+P AVA AA AA PS A+ AAA
Sbjct: 484 AAAITATAATITTTMVAAAPVAVAAAAAPAAAAAPSPAT----------------AAATA 527
Query: 232 LAVNPAAAARAAAAPAAACVQSVAESPATPLAI-AQPVSFPPAPVPCAVP---PLAAELL 287
AV+PAAA + AA + A +VA S A A+ P + P P P VP P AA+
Sbjct: 528 AAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPAAAQAS 587
Query: 288 A 288
A
Sbjct: 588 A 588
>gi|166064029 angiomotin isoform 1 [Homo sapiens]
Length = 1084
Score = 81.3 bits (199), Expect = 9e-16
Identities = 68/183 (37%), Positives = 85/183 (46%), Gaps = 16/183 (8%)
Query: 103 AAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPPAAALA 162
AAV P + P AA A AAA + A+ + AA P AV AA P AA P+ A A
Sbjct: 876 AAVAPISVPAPVAAAAT---AAAITATAATITTTMVAAAPVAVAAAAAPAAAAAPSPATA 932
Query: 163 AVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPS---AASLCAASQPAA 219
A AA P+AA A+ A AA +P+A A AAV A P+ A +L PAA
Sbjct: 933 AATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPAA 992
Query: 220 VPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFPPAPVPCAV 279
A+A AP + PA A A P A Q AE PA+P + P P ++
Sbjct: 993 AQASAPAQTQAPTSA-PAVAPTPAPTPTPAVAQ--AEVPASP-------ATGPGPHRLSI 1042
Query: 280 PPL 282
P L
Sbjct: 1043 PSL 1045
Score = 77.0 bits (188), Expect = 2e-14
Identities = 60/152 (39%), Positives = 73/152 (48%), Gaps = 6/152 (3%)
Query: 134 AASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAA 193
AA P +VPA V AA A AA + AAA P A + AA AA P+ A+ AA
Sbjct: 876 AAVAPISVPAPVAAAATAAAITATAATITTTMVAAA-PVAVAAAAAPAAAAAPSPATAAA 934
Query: 194 VAPAAVCPGAAG--PSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACV 251
A AAV P AAG P+AAS+ +A+ A AAA+ AP A P A PA A
Sbjct: 935 TA-AAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPAAA 993
Query: 252 QSVAESPATPLAIAQPVSFPPAPVPCAVPPLA 283
Q A +PA A + P P P P +A
Sbjct: 994 Q--ASAPAQTQAPTSAPAVAPTPAPTPTPAVA 1023
Score = 75.9 bits (185), Expect = 4e-14
Identities = 66/182 (36%), Positives = 84/182 (46%), Gaps = 25/182 (13%)
Query: 99 AAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPPA 158
A AP +V P A AAA AA A A ++ AA+P A AA PAA P+ A
Sbjct: 877 AVAPISVPAPVA---AAATAAAITATAATITTTMVAAAPVAVAAAAAPAAAAAPSPATAA 933
Query: 159 AALAAVYPAAAD--PSAASLCAASPLAAVPAAASPAAVAPAAVCPGAA-------GPSAA 209
A AAV PAAA P+AAS+ +A+ +A AAA+ VAPAA P A P+AA
Sbjct: 934 ATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPAAA 993
Query: 210 SLCAASQ-------PAAVPA-AASPAAAAPLAVNPAAAA-----RAAAAPAAACVQSVAE 256
A +Q PA P A +P A A PA+ A + P+ C +
Sbjct: 994 QASAPAQTQAPTSAPAVAPTPAPTPTPAVAQAEVPASPATGPGPHRLSIPSLTCNPDKTD 1053
Query: 257 SP 258
P
Sbjct: 1054 GP 1055
Score = 61.2 bits (147), Expect = 1e-09
Identities = 55/181 (30%), Positives = 74/181 (40%), Gaps = 28/181 (15%)
Query: 112 PPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADP 171
P P+ +A + + C+ + AAV P + P AA A
Sbjct: 841 PSPVPPSTPLLSAHSKTGSRDCSTQTERGTESNKTAAVAPISVPAPVAAAAT-------- 892
Query: 172 SAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAP 231
+AA A+ + AA+P AVA AA AA PS A+ AAA
Sbjct: 893 AAAITATAATITTTMVAAAPVAVAAAAAPAAAAAPSPAT----------------AAATA 936
Query: 232 LAVNPAAAARAAAAPAAACVQSVAESPATPLAI-AQPVSFPPAPVPCAVP---PLAAELL 287
AV+PAAA + AA + A +VA S A A+ P + P P P VP P AA+
Sbjct: 937 AAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPAAAQAS 996
Query: 288 A 288
A
Sbjct: 997 A 997
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 79.0 bits (193), Expect = 5e-15
Identities = 78/195 (40%), Positives = 91/195 (46%), Gaps = 26/195 (13%)
Query: 97 RPAAAPAAVRPP----AAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPP 152
+PAA ++ P AA PPA PAA P AA AA AA+PP PA A RPP
Sbjct: 230 KPAAPGTVIQTPPFVGAAAPPA--PAAPSPPAAPAPAAP--AAAPPPPPPAPATLA-RPP 284
Query: 153 A--AGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAAS 210
AGPP AA A PAAA ++ A +P PAA PA V+ PGAA + A
Sbjct: 285 GHPAGPPTAAPAVPPPAAAQNGGSAGAAPAP---APAAGGPAGVS-GQPGPGAAAAAPAP 340
Query: 211 LCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSF 270
A P V AA PAA A PA+ AA+ +Q SPA A P
Sbjct: 341 GVKAESPKRVVQAAPPAAQTLAASGPAST--AASMVIGPTMQGALPSPA-----AVP--- 390
Query: 271 PPAP-VPCAVPPLAA 284
PPAP P +P AA
Sbjct: 391 PPAPGTPTGLPKGAA 405
Score = 70.5 bits (171), Expect = 2e-12
Identities = 83/254 (32%), Positives = 97/254 (38%), Gaps = 44/254 (17%)
Query: 67 SCGNTRNLYPLTPWSAPVVVPSALTRAVAWRPA-AAPAAVRPPAAGPPAAAPAAVCPAAA 125
S + +L P TP + V+ PA AA A PA G P AAP A
Sbjct: 36 SAAHHHHLAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRA 95
Query: 126 DPSAASLCAASPPAAVPAAVPAAVRPPAA---GPPAAALAAVYPAAADPSAASLCAA-SP 181
P PP+ VPA PPAA PP + + P P+AA++ A P
Sbjct: 96 RPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPV---PAAAAVAAGPEP 152
Query: 182 LAAVPA-AASPAAVAPAAVCPG---------------AAGPSAA------SLCAASQPAA 219
A PA A PAA+A A PG AGP AA + S AA
Sbjct: 153 APAGPAKPAGPAALA-ARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAA 211
Query: 220 VPAAA----SPAAAAPLAVNPAAAAR--------AAAAPAAACVQSVAESPATPLAIAQP 267
PA + PAA PL PAA AAAP A S +PA A P
Sbjct: 212 APAVSLVNNGPAALLPLP-KPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAP 270
Query: 268 VSFPPAPVPCAVPP 281
PPAP A PP
Sbjct: 271 PPPPPAPATLARPP 284
Score = 69.7 bits (169), Expect = 3e-12
Identities = 65/199 (32%), Positives = 79/199 (39%), Gaps = 12/199 (6%)
Query: 76 PLTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPA--AGPPAAAPAAVCPAAADPSAASLC 133
P P P+A A P A RPP AGPP AAPA PAAA +
Sbjct: 252 PAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGS--- 308
Query: 134 AASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAA 193
A + PA PAA A GP AAA A A+ + AA P A AA+ PA+
Sbjct: 309 AGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPAS 368
Query: 194 VAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQS 253
A + V GP+ A PAAVP A P L A A + + S
Sbjct: 369 TAASMV----IGPTMQG--ALPSPAAVPPPA-PGTPTGLPKGAAGAVTQSLSRTPTATTS 421
Query: 254 VAESPATPLAIAQPVSFPP 272
+ TP +A + PP
Sbjct: 422 GIRATLTPTVLAPRLPQPP 440
Score = 68.2 bits (165), Expect = 8e-12
Identities = 73/194 (37%), Positives = 87/194 (44%), Gaps = 19/194 (9%)
Query: 99 AAAPAAV---RPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAG 155
AAAPA PAA P PAA P + + AA+PPA PAA PPAA
Sbjct: 210 AAAPAVSLVNNGPAALLPLPKPAA--PGTVIQTPPFVGAAAPPA------PAAPSPPAA- 260
Query: 156 PPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAV-CPGAAGPSAASLCAA 214
P AA AA P P+ A+L A P A+PA PAA G+AG + A AA
Sbjct: 261 PAPAAPAAA-PPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAA 319
Query: 215 SQPAAVPAAASP--AAAAPLAVNPAAAARAAAAPAAACVQSVAES-PATPLA--IAQPVS 269
PA V P AAAAP A + + A Q++A S PA+ A + P
Sbjct: 320 GGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTM 379
Query: 270 FPPAPVPCAVPPLA 283
P P AVPP A
Sbjct: 380 QGALPSPAAVPPPA 393
Score = 66.2 bits (160), Expect = 3e-11
Identities = 71/207 (34%), Positives = 82/207 (39%), Gaps = 18/207 (8%)
Query: 87 PSALTRAVAWRPAAAPAAVRPP---AAGPPAAAPAAVCPAAA-DPSAASLCAASPPAAVP 142
PS V PA A +RPP +AG A PAA AA +P+ A + PAA+
Sbjct: 108 PSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALA 167
Query: 143 A-AVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCP 201
A A P P GP P AA S + A A S PAA+ P
Sbjct: 168 ARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLP 227
Query: 202 GAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATP 261
AA P V AAA PA AAP AA A AAPAAA P P
Sbjct: 228 --LPKPAAPGTVIQTPPFVGAAAPPAPAAP----SPPAAPAPAAPAAA----PPPPPPAP 277
Query: 262 LAIAQPVSF---PPAPVPCAVPPLAAE 285
+A+P PP P PP AA+
Sbjct: 278 ATLARPPGHPAGPPTAAPAVPPPAAAQ 304
Score = 60.8 bits (146), Expect = 1e-09
Identities = 69/211 (32%), Positives = 82/211 (38%), Gaps = 19/211 (9%)
Query: 87 PSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVP 146
P+AL P P P G PA AA + S AA+P ++ P
Sbjct: 163 PAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGP 222
Query: 147 AAVRP---PAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGA 203
AA+ P PAA AAA P+ A A SP AA PA APAA P
Sbjct: 223 AALLPLPKPAAPGTVIQTPPFVGAAAPPAPA---APSPPAA------PAPAAPAA-APPP 272
Query: 204 AGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAAC--VQSVAESPATP 261
P+ A+L A P A+PA P A +A AA APA A V+ P
Sbjct: 273 PPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPG 332
Query: 262 LAIAQPV----SFPPAPVPCAVPPLAAELLA 288
A A P + P V A PP A L A
Sbjct: 333 AAAAAPAPGVKAESPKRVVQAAPPAAQTLAA 363
Score = 33.5 bits (75), Expect = 0.22
Identities = 42/146 (28%), Positives = 51/146 (34%), Gaps = 28/146 (19%)
Query: 158 AAALAAVYPAAADPSAASLCAASPLAAVPAAASPAA------VAPAAVCPGAA------- 204
AA+ A + A AA L + SPA APA PGAA
Sbjct: 34 AASAAHHHHLAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAG 93
Query: 205 -------GPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAE- 256
GP + +P VPA +P AA +A A PAAA V + E
Sbjct: 94 RARPGGGGPQRPGPPSPRRP-LVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEP 152
Query: 257 ------SPATPLAIAQPVSFPPAPVP 276
PA P A+A P P P
Sbjct: 153 APAGPAKPAGPAALAARAGPGPGPGP 178
>gi|156071476 hypothetical protein LOC401137 [Homo sapiens]
Length = 219
Score = 77.0 bits (188), Expect = 2e-14
Identities = 56/124 (45%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Query: 64 RGDSCGNTRNLYPLTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPA 123
RG N+ PL P P V PS A AAAPAA P AA P AAAP P
Sbjct: 91 RGFPLATQLNVPPLPPRGFPFVPPSRFFSA-----AAAPAAP-PIAAEPAAAAPLTATPV 144
Query: 124 AADPSAASLCAASPPAAVP-AAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPL 182
AA+P+A + AA P A P A PAA P AA P A A V PAA +PS A A P
Sbjct: 145 AAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPA 204
Query: 183 AAVP 186
A P
Sbjct: 205 APEP 208
Score = 72.4 bits (176), Expect = 4e-13
Identities = 42/96 (43%), Positives = 51/96 (53%)
Query: 151 PPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAAS 210
PP+ AAA A P AA+P+AA+ A+P+AA PAA +P A PAA P A P+A +
Sbjct: 113 PPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEA 172
Query: 211 LCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAP 246
AA A P PAA P PA A AA P
Sbjct: 173 PVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEP 208
Score = 71.6 bits (174), Expect = 7e-13
Identities = 42/93 (45%), Positives = 48/93 (51%)
Query: 156 PPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAAS 215
PP+ +A AA P AA AA+PL A P AA PAA AP A P A P A A +
Sbjct: 113 PPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEA 172
Query: 216 QPAAVPAAASPAAAAPLAVNPAAAARAAAAPAA 248
AA PAA +P P A P+ A A A PAA
Sbjct: 173 PVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAA 205
Score = 70.5 bits (171), Expect = 2e-12
Identities = 56/135 (41%), Positives = 61/135 (45%), Gaps = 21/135 (15%)
Query: 98 PAAAPAAVRP-PAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGP 156
P A V P P G P P+ AAA P+A PP A A PAA P A P
Sbjct: 94 PLATQLNVPPLPPRGFPFVPPSRFFSAAAAPAA-------PPIA---AEPAAAAPLTATP 143
Query: 157 PAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQ 216
AA AA P AA+P+A + A P A P AA PAA AP V P A PS A
Sbjct: 144 VAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAE------ 197
Query: 217 PAAVPAAASPAAAAP 231
PA A PAA P
Sbjct: 198 ----PATAKPAAPEP 208
Score = 69.7 bits (169), Expect = 3e-12
Identities = 48/106 (45%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Query: 171 PSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAA 230
PS AA+P AA P AA PAA AP P AA P+A + AA A P A PAA A
Sbjct: 114 PSRFFSAAAAP-AAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEA 172
Query: 231 PLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFPPAPVP 276
P+A PAA A PAA SPA P A A+P + P P P
Sbjct: 173 PVAAEPAAEAPVGVEPAAE-----EPSPAEP-ATAKPAAPEPHPSP 212
Score = 68.6 bits (166), Expect = 6e-12
Identities = 43/104 (41%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 137 PPAAVPAAVPA----AVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPA 192
PP P P+ A PAA P AA AA P A P AA A +P+AA PAA +P
Sbjct: 105 PPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPV 164
Query: 193 AVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNP 236
PAA P AA P+A + A P+ A PA A P A P
Sbjct: 165 GAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEP 208
Score = 60.1 bits (144), Expect = 2e-09
Identities = 39/82 (47%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 206 PSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESP--ATPLA 263
P + AA+ PAA P AA PAAAAPL P AA AA AP AA + AE+P A P A
Sbjct: 113 PPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAA--EPAAEAPVGAEPAA 170
Query: 264 IAQPVSFPPAPVPCAVPPLAAE 285
A + P A P V P A E
Sbjct: 171 EAPVAAEPAAEAPVGVEPAAEE 192
Score = 55.5 bits (132), Expect = 5e-08
Identities = 37/96 (38%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 191 PAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAAC 250
P+ AA P AA P AA AA+ A P AA PAA AP+A PAA A A PAA
Sbjct: 114 PSRFFSAAAAP-AAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEA 172
Query: 251 VQSVAESPATPLAIAQPVSFPPAPV-PCAVPPLAAE 285
+ + P+ + +P + P+P P P A E
Sbjct: 173 PVAAEPAAEAPVGV-EPAAEEPSPAEPATAKPAAPE 207
Score = 45.1 bits (105), Expect = 7e-05
Identities = 33/78 (42%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Query: 76 PLTPWSAPVVVPSALTRAVAWRPAAA------PAAVRPPAAGPPAAAPAAVCPAAADPSA 129
PLT + PV A VA PAA PAA P AA P A AP V PAA +PS
Sbjct: 138 PLT--ATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSP 195
Query: 130 ASLCAASPPAAVPAAVPA 147
A A P A P P+
Sbjct: 196 AEPATAKPAAPEPHPSPS 213
Score = 37.7 bits (86), Expect = 0.012
Identities = 26/69 (37%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 217 PAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFPPAPVP 276
P P+ AAAAP A P AA AAAAP A + + P+A P P
Sbjct: 110 PFVPPSRFFSAAAAP-AAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEP 168
Query: 277 CAVPPLAAE 285
A P+AAE
Sbjct: 169 AAEAPVAAE 177
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 76.3 bits (186), Expect = 3e-14
Identities = 72/215 (33%), Positives = 90/215 (41%), Gaps = 20/215 (9%)
Query: 76 PLTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAA 135
P T AP +A R A+PAA P P +PAA P +P++ + AA
Sbjct: 977 PATTVHAPEEPDTAAVRVSTPEEPASPAAAVPTPEEP--TSPAAAVPTPEEPTSPA--AA 1032
Query: 136 SPPAAVPAAVPAAV-RPPAAGPPAAALAA----VYPAAADPSAASLCAASPLAAVPAAAS 190
PP P + AAV P PAAA+ PAAA P+ SP AAVP
Sbjct: 1033 VPPPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEE--PTSPAAAVPTPEE 1090
Query: 191 PAAVAPAAVCPGAAGPSAASLCAASQPAAVPAA-------ASPAAAAPLAVNPAAAARAA 243
P + A A P AA++ +PA+ AA ASPAAA P PA A A
Sbjct: 1091 PTSPAAAVPTPEEPTSPAAAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEEPAFPAPAV 1150
Query: 244 AAPAAACVQSVAESPATPLAIAQPVSFPPAPVPCA 278
P + S A + TP A P + P P A
Sbjct: 1151 PTPEESA--SAAVAVPTPEESASPAAAVPTPAESA 1183
Score = 74.7 bits (182), Expect = 9e-14
Identities = 78/238 (32%), Positives = 105/238 (44%), Gaps = 40/238 (16%)
Query: 76 PLTPWSAPVVVPSALTRAVAWRPAAA------PAAVRPPAAGPPAAAPAAVCPAAADPSA 129
P P S VP+ A PAAA PA+ P AA P PA PA P
Sbjct: 1101 PEEPTSPAAAVPTPEEPA---SPAAAVPTPEEPAS--PAAAVPTPEEPAFPAPAVPTPEE 1155
Query: 130 ASLCAASPPAAVPAAVPAAVRP-PAAGPPAAALAAVY-----PAAADPSAASLCAA---- 179
++ A + P +A PAA P PA AA+ A PAA+ P+ A++ A
Sbjct: 1156 SASAAVAVPTPEESASPAAAVPTPAESASFAAVVATLEEPTSPAASVPTPAAMVATLEEF 1215
Query: 180 -SPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAA-------ASPAAAAP 231
SP A+VP + PA++A A P AA++ +P + AA +SPAA+ P
Sbjct: 1216 TSPAASVPTSEEPASLAAAVSNPEEPTSPAAAVPTLEEPTSSAAAVLTPEELSSPAASVP 1275
Query: 232 LAVNPAAAARAA------AAPAAAC-VQSVAESPATPLAIAQPVSFPPAPVPCAVPPL 282
PA+ A A A+PAAA VA PA + + + P A AVPP+
Sbjct: 1276 TPEEPASPAAAVSNLEEPASPAAAVPTPEVAAIPAASVPTPEVPAIPAA----AVPPM 1329
Score = 71.2 bits (173), Expect = 1e-12
Identities = 77/236 (32%), Positives = 102/236 (43%), Gaps = 34/236 (14%)
Query: 76 PLTPWSAPVVVPSALTRAVAWRPAAA---PAAVRPPAAGPPA----AAPAAVCPAAADPS 128
P P S VP T PAAA P PAA P +PAA P +P+
Sbjct: 1049 PEEPTSPAAAVP---TPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPT 1105
Query: 129 AASLCAASP--PAAVPAAVPAAVRP--PAAGPPAAALAAVYPAAADP----SAASLCA-- 178
+ + +P PA+ AAVP P PAA P A +PA A P SA++ A
Sbjct: 1106 SPAAAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEEPA-FPAPAVPTPEESASAAVAVP 1164
Query: 179 -----ASPLAAVPAAASPAAVAPA-AVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPL 232
ASP AAVP A A+ A A P+A+ A+ A + SPAA+ P
Sbjct: 1165 TPEESASPAAAVPTPAESASFAAVVATLEEPTSPAASVPTPAAMVATLEEFTSPAASVPT 1224
Query: 233 AVNPAAAARAAAAP-----AAACVQSVAESPATPLAIAQP--VSFPPAPVPCAVPP 281
+ PA+ A A + P AA V ++ E ++ A+ P +S P A VP P
Sbjct: 1225 SEEPASLAAAVSNPEEPTSPAAAVPTLEEPTSSAAAVLTPEELSSPAASVPTPEEP 1280
Score = 69.3 bits (168), Expect = 4e-12
Identities = 81/255 (31%), Positives = 107/255 (41%), Gaps = 46/255 (18%)
Query: 76 PLTPWSAPVVVPSALTRAVAWRPA----AAPAAVRPPAAGP--PAAA---------PAAV 120
P +P +A V P T A P +PAA PP P PAAA PAA
Sbjct: 1000 PASP-AAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPPPEEPTSPAAAVPTPEEPTSPAAA 1058
Query: 121 CPAAADPSAASLCAASP--PAAVPAAVPAAVRP--PAAGPPA----AALAAVYPAAADPS 172
P +P++ + +P P + AAVP P PAA P + AA P +P+
Sbjct: 1059 VPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPA 1118
Query: 173 AASLCA------ASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLC----AASQPAAVPA 222
+ + ASP AAVP PA APA P + +A ++ +AS AAVP
Sbjct: 1119 SPAAAVPTPEEPASPAAAVPTPEEPAFPAPAVPTPEESASAAVAVPTPEESASPAAAVPT 1178
Query: 223 AASPAAAAPLAV------NPAAAARAAAAPAAACVQ--SVAESPAT---PLAIAQPVSFP 271
A A+ A + +PAA+ AA A + S A S T P ++A VS P
Sbjct: 1179 PAESASFAAVVATLEEPTSPAASVPTPAAMVATLEEFTSPAASVPTSEEPASLAAAVSNP 1238
Query: 272 PAPV-PCAVPPLAAE 285
P P A P E
Sbjct: 1239 EEPTSPAAAVPTLEE 1253
Score = 64.3 bits (155), Expect = 1e-10
Identities = 66/225 (29%), Positives = 84/225 (37%), Gaps = 27/225 (12%)
Query: 79 PWSAPVVVPSALTRAVAWRPAAAPAAVRPPAA-------GPPAAAPAAVCPAAADPSAAS 131
P A + ++ + P A A+ P GP A P D +A
Sbjct: 934 PAVAAAITQEGMSAVAGFSPEWAALAITVPITEEDGTPEGPVTPATTVHAPEEPDTAAVR 993
Query: 132 LCAASPPAAVPAAVP---------AAV-RPPAAGPPAAAL----AAVYPAAADPSAASLC 177
+ PA+ AAVP AAV P PAAA+ PAAA P+
Sbjct: 994 VSTPEEPASPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPPPEEPTSPAAAVPTPEE-- 1051
Query: 178 AASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPA 237
SP AAVP P + A A P AA++ +P + PAAA P P +PA
Sbjct: 1052 PTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTS-PAAAVPTPEEP--TSPA 1108
Query: 238 AAARAAAAPAA-ACVQSVAESPATPLAIAQPVSFPPAPVPCAVPP 281
AA PA+ A E PA+P A P P P P
Sbjct: 1109 AAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEEPAFPAPAVPTP 1153
Score = 50.8 bits (120), Expect = 1e-06
Identities = 61/191 (31%), Positives = 73/191 (38%), Gaps = 22/191 (11%)
Query: 100 AAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPP--AAVPAAVPAAVRPPAAGPP 157
AA AAV P PA A AA S A P AA+ VP P
Sbjct: 921 AAVAAVSSPEETAPAVA------AAITQEGMSAVAGFSPEWAALAITVPITEEDGTPEGP 974
Query: 158 AAALAAVYPAAADPSAASLCAASPLA-AVPAAASPAAVAPAAVCPGAAGPSAASLCAASQ 216
V+ A +P A++ ++P A PAAA P P + P AA P+ S
Sbjct: 975 VTPATTVH-APEEPDTAAVRVSTPEEPASPAAAVPTPEEPTS--PAAAVPTPEE--PTSP 1029
Query: 217 PAAVP---AAASPAAAAPLAVNPAAAARAAAAP----AAACVQSVAESPATPLAIAQPVS 269
AAVP SPAAA P P + A A P + A E P +P A A P
Sbjct: 1030 AAAVPPPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSP-AAAVPTP 1088
Query: 270 FPPAPVPCAVP 280
P AVP
Sbjct: 1089 EEPTSPAAAVP 1099
Score = 47.0 bits (110), Expect = 2e-05
Identities = 51/187 (27%), Positives = 66/187 (35%), Gaps = 18/187 (9%)
Query: 110 AGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAG-----PPAAALAAV 164
+ P A AV + + +AA +SP PA A + + P AALA
Sbjct: 902 SAPERATVPAVTVSVPEGTAAVAAVSSPEETAPAVAAAITQEGMSAVAGFSPEWAALAIT 961
Query: 165 YPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQP----AAV 220
P + +P V A P A P AA++ +P AAV
Sbjct: 962 VPITEEDGTPE-GPVTPATTVHAPEEPDTAAVRVSTPEEPASPAAAVPTPEEPTSPAAAV 1020
Query: 221 PA---AASPAAAAPLAVNPAAAARAAAAP----AAACVQSVAESPATPLAIAQPVSFPPA 273
P SPAAA P P + A A P + A E P +P A A P P
Sbjct: 1021 PTPEEPTSPAAAVPPPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSP-AAAVPTPEEPT 1079
Query: 274 PVPCAVP 280
AVP
Sbjct: 1080 SPAAAVP 1086
Score = 42.7 bits (99), Expect = 4e-04
Identities = 65/222 (29%), Positives = 83/222 (37%), Gaps = 28/222 (12%)
Query: 69 GNTRNLYPLTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPS 128
GNT + L W PV+ + T AV A AA+ P G AA A
Sbjct: 818 GNTEPV--LEEW-IPVLQRPSRTAAVPTVKDALDAALPSPEEGTSIAA------VPAPEG 868
Query: 129 AASLCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAA 188
A + A P V + V AAA++A P A A ++ AAV A
Sbjct: 869 TAVVAALVPFPHEDILVASIVSLEEEDVTAAAVSA--PERATVPAVTVSVPEGTAAVAAV 926
Query: 189 ASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLA---------VNPAAA 239
+SP APA AA + + A + P A+ A P+ V PA
Sbjct: 927 SSPEETAPAV----AAAITQEGMSAVA--GFSPEWAALAITVPITEEDGTPEGPVTPATT 980
Query: 240 ARAAAAPAAACVQ-SVAESPATPLAIAQPVSFPPAPVPCAVP 280
A P A V+ S E PA+P A A P P AVP
Sbjct: 981 VHAPEEPDTAAVRVSTPEEPASP-AAAVPTPEEPTSPAAAVP 1021
Score = 32.0 bits (71), Expect = 0.65
Identities = 28/90 (31%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
Query: 78 TPWSAPVVVPSALTRAVAWRPA----AAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLC 133
T +A V+ P L+ A P A+PAA P + A A P A AAS+
Sbjct: 1255 TSSAAAVLTPEELSSPAASVPTPEEPASPAAAVSNLEEPASPAAAVPTPEVAAIPAASVP 1314
Query: 134 AASPPAAVPAAVPAAVRPPAAGPPAAALAA 163
PA AAVP G P ++A
Sbjct: 1315 TPEVPAIPAAAVPPMEEVSPIGVPFLGVSA 1344
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 73.6 bits (179), Expect = 2e-13
Identities = 74/237 (31%), Positives = 104/237 (43%), Gaps = 32/237 (13%)
Query: 76 PLT-PWSAPVVV----PSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAA 130
PLT P SAP+ V P+ LT PAA PP+ P A+P+A +A
Sbjct: 1454 PLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALTLGLATAP 1513
Query: 131 SLCAASPP------AAVPAAVPA--AVRPPAAGP---PAAALAAVYPAAADPSAASLCAA 179
SL ++ P A + VP + PA P PA+ALA+ +P+A +P+ A
Sbjct: 1514 SLSSSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSAPNPAPAQASLL 1573
Query: 180 SPLA-AVPAAASP----AAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAV 234
+P + A A A+P AA A + P A P A A P A P AS P+
Sbjct: 1574 APASSASQALATPLAPMAAPQTAILAPSPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMA 1633
Query: 235 --NPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFPPAPVPCAVP-PLAAELLA 288
+ + A+A+P A P LA + + PAPVP +P P + + LA
Sbjct: 1634 PSSTPGTSLASASPVPA--------PTPVLAPSSTQTMLPAPVPSPLPSPASTQTLA 1682
Score = 72.4 bits (176), Expect = 4e-13
Identities = 77/227 (33%), Positives = 111/227 (48%), Gaps = 38/227 (16%)
Query: 79 PWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGP-PAAAPAAVCPAAADPSAASLC-AAS 136
P S+P+ P + T +V P ++ + P P PA+AP + P +A L +AS
Sbjct: 1418 PNSSPLASPVSSTVSV---PLSSSLPISVPTTLPAPASAPLTI------PISAPLTVSAS 1468
Query: 137 PPAAVPAAVP--AAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAAS---- 190
PA + + P A V P A GPP+ A P+ A PSA++L LA P+ +S
Sbjct: 1469 GPALLTSVTPPLAPVVPAAPGPPSLA-----PSGASPSASALTLG--LATAPSLSSSQTP 1521
Query: 191 --PAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAA 248
P +AP + + A C+ P VPA+A A+ P A NPA A + APA+
Sbjct: 1522 GHPLLLAPTSSHVPGLNSTVAPACS---PVLVPASAL-ASPFPSAPNPAPAQASLLAPAS 1577
Query: 249 ACVQSVAESPATPLAIAQ-----PVSFPP-APVPCAVP-PLAAELLA 288
+ Q++A +P P+A Q P PP AP+P P P AA +LA
Sbjct: 1578 SASQALA-TPLAPMAAPQTAILAPSPAPPLAPLPVLAPSPGAAPVLA 1623
Score = 62.0 bits (149), Expect = 6e-10
Identities = 59/214 (27%), Positives = 86/214 (40%), Gaps = 21/214 (9%)
Query: 76 PLTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGP---PAAAPAAVCP---------- 122
PL P AP S L + RP P + P G P P V P
Sbjct: 1326 PLAP--APRPPSSGLPAVLNPRPTLTPGRLPTPTLGTARAPMPTPTLVRPLLKLVHSPSP 1383
Query: 123 --AAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAAS 180
+A+ P AA L +SP VP+++P P P ++ LA+ + +S S
Sbjct: 1384 EVSASAPGAAPLTISSP-LHVPSSLPGPASSPMPIPNSSPLASPVSSTVSVPLSSSLPIS 1442
Query: 181 PLAAVPAAASPAAVAP--AAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAA 238
+PA AS P A + A+GP+ + VPAA P + AP +P+A
Sbjct: 1443 VPTTLPAPASAPLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSA 1502
Query: 239 AARAAAAPAAACVQSVAESPATPLAIAQPVSFPP 272
+A A + S +++P PL +A S P
Sbjct: 1503 SALTLGLATAPSLSS-SQTPGHPLLLAPTSSHVP 1535
Score = 62.0 bits (149), Expect = 6e-10
Identities = 57/198 (28%), Positives = 78/198 (39%), Gaps = 28/198 (14%)
Query: 85 VVPSALTRAVAWRPAAAPAAVRPPAAGP-----PAAAPAAVCPAAADPSAASLCAASPPA 139
V+ + TR+ P +PA R P P PA+APAA+ PA
Sbjct: 2414 VISAHQTRSTTTPPRCSPARERVPRPAPRPRPTPASAPAAI-----------------PA 2456
Query: 140 AVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAV 199
VP V A V A P + P+ PS C++ PA P A P
Sbjct: 2457 LVPVPVSAPVPISAPNPITILPVHILPSPPPPSQIPPCSSPACTPPPACTPPPAHTPPPA 2516
Query: 200 CPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAA--AARAAAAPAAACVQSVAES 257
PS+ L P +VP +AS PL + P A A+A A+P + + SVA S
Sbjct: 2517 QTCLVTPSSPLLLG---PPSVPISAS-VTNLPLGLRPEAELCAQALASPESLELASVASS 2572
Query: 258 PATPLAIAQPVSFPPAPV 275
+ L++ P P V
Sbjct: 2573 ETSSLSLVPPKDLLPVAV 2590
Score = 59.3 bits (142), Expect = 4e-09
Identities = 74/268 (27%), Positives = 104/268 (38%), Gaps = 57/268 (21%)
Query: 77 LTPWSAPVVVPSALTRAV---AWRPAAAPAAVRPPAAGP---------PAAAP--AAVCP 122
+ P +PV+VP++ + A PA A A++ PA+ P AAP A + P
Sbjct: 1541 VAPACSPVLVPASALASPFPSAPNPAPAQASLLAPASSASQALATPLAPMAAPQTAILAP 1600
Query: 123 AAADPSAASLCAASPPAAVPAAVPAAVRPPAAGP---PAAALAAVYPAAAD-----PSAA 174
+ A P A A P A P + P P P +LA+ P A PS+
Sbjct: 1601 SPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSST 1660
Query: 175 SLCAASPLAAV---PAAASPAAVAPA-AVCPGAAGPSAA-SLCAASQPAAVPAAA-SPAA 228
+P+ + PA+ A+APA A G + PS SL + P S
Sbjct: 1661 QTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPFPTQTLSLTP 1720
Query: 229 AAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPV-------------------- 268
A+ L PA A P Q+++ +PA PLA A PV
Sbjct: 1721 ASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLL 1780
Query: 269 --------SFPPAPVPCAVPPLAAELLA 288
+ PAPVP + P AA+ LA
Sbjct: 1781 APASVQTLTLSPAPVP-TLGPAAAQTLA 1807
Score = 52.4 bits (124), Expect = 5e-07
Identities = 61/203 (30%), Positives = 82/203 (40%), Gaps = 22/203 (10%)
Query: 79 PWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAA---SLCAA 135
P PV+ PS+ + PA P+ + PA+ A A+ P S + SL
Sbjct: 1649 PAPTPVLAPSSTQTML---PAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTG 1705
Query: 136 SPPAAVPAAVPAAVRPPAAGP-PAAALA-AVYPAAADPSAASLCAASPLAAVPAAASPAA 193
+P P + + P PA L+ A P SL A PLA ASP
Sbjct: 1706 NPQGPFPTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAP----ASPVG 1761
Query: 194 VAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQS 253
APA A S+ASL A PA+V A P + PAAA A APA+
Sbjct: 1762 PAPAHTLTLAPASSSASLLA---PASVQTLTLSPAPVP-TLGPAAAQTLALAPAS----- 1812
Query: 254 VAESPATPLAIAQPVSFPPAPVP 276
+SPA+ + + AP+P
Sbjct: 1813 -TQSPASQASSLVVSASGAAPLP 1834
Score = 47.0 bits (110), Expect = 2e-05
Identities = 50/168 (29%), Positives = 71/168 (42%), Gaps = 18/168 (10%)
Query: 69 GNTRNLYP-----LTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPA 123
GN + +P LTP S+ V P A T ++A P P A PP A + V PA
Sbjct: 1705 GNPQGPFPTQTLSLTPASSLVPTP-AQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPA 1763
Query: 124 AADPSAASLCAASPPAAVPAAV------PAAVRPPAAGPPAAALAAVYPAAADPSAASLC 177
A + ++S PA+V PA V P GP AA A+ PA+ A+
Sbjct: 1764 PAHTLTLAPASSSASLLAPASVQTLTLSPAPV--PTLGPAAAQTLALAPASTQSPASQ-- 1819
Query: 178 AASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAAS 225
AS L + A+P V + P + +L S P + P+ A+
Sbjct: 1820 -ASSLVVSASGAAPLPVTMVSRLP-VSKDEPDTLTLRSGPPSPPSTAT 1865
Score = 46.2 bits (108), Expect = 3e-05
Identities = 58/222 (26%), Positives = 84/222 (37%), Gaps = 31/222 (13%)
Query: 72 RNLYPLTPWSAPVVV----PSALTRAVAWRPAAAPAAVRPPAAGP-PAAAPAAVCPAAAD 126
R L P+ VV P A V RP P P GP P PA++ +A
Sbjct: 996 RMLQPVPKQEGRTVVVVNNPRAPLGPVPVRPPPGPELSAQPTPGPVPQVLPASLM-VSAS 1054
Query: 127 PSAASLCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPA-------AADPSAASLC-- 177
P+ L AS P P V P P + +L V P+ + P +L
Sbjct: 1055 PAGPPLIPASRP-------PGPVLLPPLQPNSGSLPQVLPSPLGVLSGTSRPPTPTLSLK 1107
Query: 178 ----AASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPA---AAA 230
A L+ P S + + P V PG P AA+ ++ A A PA A
Sbjct: 1108 PTPPAPVRLSPAPPPGSSSLLKPLTVPPGYTFPPAAATTTSTTTATATTTAVPAPTPAPQ 1167
Query: 231 PLAVNPAAAARAAAAPAAACVQ--SVAESPATPLAIAQPVSF 270
L ++P AR + + Q S+A+ P ++P++F
Sbjct: 1168 RLILSPDMQARLPSGEVVSIGQLASLAQRPVANAGGSKPLTF 1209
Score = 45.4 bits (106), Expect = 6e-05
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 30/176 (17%)
Query: 78 TPWSAPVVVPSALTRAV-AWRPAAAPAAVR-----------PPAAGPPAAAPAAVCPAAA 125
TP SAP +P+ + V A P +AP + PP+ PP ++PA P A
Sbjct: 2446 TPASAPAAIPALVPVPVSAPVPISAPNPITILPVHILPSPPPPSQIPPCSSPACTPPPAC 2505
Query: 126 DPSAASLCAASPPAAVPAAVPAAVRPPAAGPPAAALAAV---YPAAADPSAASLCAASPL 182
P A PPA P++ P GPP+ ++A P P A LCA
Sbjct: 2506 TPPPAH---TPPPAQTCLVTPSS--PLLLGPPSVPISASVTNLPLGLRPE-AELCA---- 2555
Query: 183 AAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAA 238
A ASP ++ A+V ++ S+ SL V P + L++ P+A
Sbjct: 2556 ---QALASPESLELASV--ASSETSSLSLVPPKDLLPVAVEILPVSEKNLSLTPSA 2606
Score = 44.3 bits (103), Expect = 1e-04
Identities = 48/210 (22%), Positives = 79/210 (37%), Gaps = 16/210 (7%)
Query: 89 ALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVC-PAAADPSAASLCAASPPAAV------ 141
AL +AVA P P +V P + AP + P AA+ ++ + +
Sbjct: 1258 ALIQAVAPTPGPTPVSVLPSSTPSTTPAPTGLSLPLAANQVPPTMVNNTGVVKIVVRQAP 1317
Query: 142 -PAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVC 200
P PA PP++ L AV + L + A +P V P
Sbjct: 1318 RDGLTPVPPLAPAPRPPSSGLPAVLNPRPTLTPGRLPTPTLGTARAPMPTPTLVRPLLKL 1377
Query: 201 PGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPAT 260
+ P + AS P A P S P ++ A++ ++ V+ + +
Sbjct: 1378 VHSPSPEVS----ASAPGAAPLTISSPLHVPSSLPGPASSPMPIPNSSPLASPVSSTVSV 1433
Query: 261 PLAIAQPVSFPPA-PVPCAVP---PLAAEL 286
PL+ + P+S P P P + P P++A L
Sbjct: 1434 PLSSSLPISVPTTLPAPASAPLTIPISAPL 1463
Score = 38.1 bits (87), Expect = 0.009
Identities = 34/114 (29%), Positives = 46/114 (40%), Gaps = 8/114 (7%)
Query: 180 SPLAAVPAAASPAAVAPAAVCPGAAGPSA-ASLCAASQPAA---VPAAASPAAAAPLAVN 235
+PL VP P A PG ASL ++ PA +PA+ P +
Sbjct: 1017 APLGPVPVRPPPGPELSAQPTPGPVPQVLPASLMVSASPAGPPLIPASRPPGPVLLPPLQ 1076
Query: 236 PAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFPPAPVPC--AVPPLAAELL 287
P + + P+ V S P TP +P PPAPV A PP ++ LL
Sbjct: 1077 PNSGSLPQVLPSPLGVLSGTSRPPTPTLSLKPT--PPAPVRLSPAPPPGSSSLL 1128
Score = 32.0 bits (71), Expect = 0.65
Identities = 63/275 (22%), Positives = 87/275 (31%), Gaps = 75/275 (27%)
Query: 74 LYPLTP--WSAPVVVPSAL----------TRAVAWRPAAAPAAVRPPAAGPPAAA----- 116
L PL P S P V+PS L T ++ +P PA VR A PP ++
Sbjct: 1072 LPPLQPNSGSLPQVLPSPLGVLSGTSRPPTPTLSLKPTP-PAPVRLSPAPPPGSSSLLKP 1130
Query: 117 ----PAAVCPAAADPSAASLCAASPPAAVPAAVPA------------------------- 147
P P AA + ++ A + AVPA PA
Sbjct: 1131 LTVPPGYTFPPAAATTTSTTTATATTTAVPAPTPAPQRLILSPDMQARLPSGEVVSIGQL 1190
Query: 148 ---AVRPPA-------------------AGPPAAALAAVYPAAADPSAASLCAASPLAAV 185
A RP A G LA P + L +A +
Sbjct: 1191 ASLAQRPVANAGGSKPLTFQIQGNKLTLTGAQVRQLAVGQPRPLQRNVVHLVSAGGQHHL 1250
Query: 186 PAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAA 245
+ PA VA GP+ S+ +S P+ PA + PLA N
Sbjct: 1251 --ISQPAHVALIQAVAPTPGPTPVSVLPSSTPSTTPAPT--GLSLPLAANQVPPTMVNNT 1306
Query: 246 PAAACVQSVAESPATPLAIAQPVSFPPAPVPCAVP 280
V V ++P L P++ P P +P
Sbjct: 1307 GVVKIV--VRQAPRDGLTPVPPLAPAPRPPSSGLP 1339
Score = 30.4 bits (67), Expect = 1.9
Identities = 62/252 (24%), Positives = 83/252 (32%), Gaps = 60/252 (23%)
Query: 78 TPWSAPVVVPSALTRAVAWRPAAAPA--AVRPPAAG--PPAAAPAAVCPAA--------- 124
TP P V+P++L V+ PA P A RPP PP + P
Sbjct: 1037 TPGPVPQVLPASLM--VSASPAGPPLIPASRPPGPVLLPPLQPNSGSLPQVLPSPLGVLS 1094
Query: 125 --------------ADPSAASLCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAAD 170
P+ L A PP + P V P PPAAA
Sbjct: 1095 GTSRPPTPTLSLKPTPPAPVRLSPAPPPGSSSLLKPLTVPPGYTFPPAAA---------- 1144
Query: 171 PSAASLCAASPLAAVPA---AASPAAVAP--AAVCPGAAGPSAASLCA-ASQPAAVPAAA 224
+ ++ A + AVPA A ++P A P S L + A +P A +
Sbjct: 1145 TTTSTTTATATTTAVPAPTPAPQRLILSPDMQARLPSGEVVSIGQLASLAQRPVANAGGS 1204
Query: 225 SP--------------AAAAPLAV-NPAAAARAAAAPAAACVQSVAESPATPLAIAQPVS 269
P A LAV P R +A Q S +A+ Q V+
Sbjct: 1205 KPLTFQIQGNKLTLTGAQVRQLAVGQPRPLQRNVVHLVSAGGQHHLISQPAHVALIQAVA 1264
Query: 270 FPPAPVPCAVPP 281
P P P +V P
Sbjct: 1265 PTPGPTPVSVLP 1276
Score = 30.0 bits (66), Expect = 2.5
Identities = 53/246 (21%), Positives = 78/246 (31%), Gaps = 44/246 (17%)
Query: 78 TPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASP 137
TP S+P +T VA P+ + +A P PA P A +
Sbjct: 2682 TPTSSPEKPQELVTAEVA-APSTSSSATSSPEGPSPARPPRRRTSADVEIRGQGTGRPGQ 2740
Query: 138 PAA------VPAAVPAAV--------RPPAAGPPAAALAAVYPAAADPSAASLCAASPLA 183
P +P + V R G + + V +A P + S+ + S
Sbjct: 2741 PPGPKVLRKLPGRLVTVVEEKELVRRRRQQRGAASTLVPGVSETSASPGSPSVRSMSGPE 2800
Query: 184 AVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASP--AAAAPLAVNPAAAAR 241
+ P P AP++ P P + V SP A LA+ P A R
Sbjct: 2801 SSPPIGGPCEAAPSSSLP--TPPQQPFIARRHIELGVTGGGSPENGDGALLAITPPAVKR 2858
Query: 242 AAAAP------AAACVQSVAESPAT----------------PLAIAQPVSFP---PAPVP 276
P A + V E+P++ L +A PV P P P P
Sbjct: 2859 RRGRPPKKNRSPADAGRGVDEAPSSTLKGKTNGADPVPGPETLIVADPVLEPQLIPGPQP 2918
Query: 277 CAVPPL 282
P+
Sbjct: 2919 LGPQPV 2924
Score = 29.3 bits (64), Expect = 4.2
Identities = 24/82 (29%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Query: 214 ASQPAAVPAAASPAAAAPLAV---NPAAAARAAAAPAAACVQSV--AESPAT---PLAIA 265
AS PAA+PA +AP+ + NP P+ + SPA P
Sbjct: 2448 ASAPAAIPALVPVPVSAPVPISAPNPITILPVHILPSPPPPSQIPPCSSPACTPPPACTP 2507
Query: 266 QPVSFPPAPVPCAVPPLAAELL 287
P PP C V P + LL
Sbjct: 2508 PPAHTPPPAQTCLVTPSSPLLL 2529
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 72.8 bits (177), Expect = 3e-13
Identities = 64/197 (32%), Positives = 88/197 (44%), Gaps = 19/197 (9%)
Query: 102 PAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGP----P 157
P + A G A +A P A +AS PA+ A +PA + P A P
Sbjct: 1727 PRFAKKQATGIQQAQSSASVPPLASAPLPPSTSASVPASTSAPLPATLTPVPASTSAPVP 1786
Query: 158 AAALAAVY-----PAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLC 212
A+ LA V P A P A +AS A+VPA+ S AA+ ++ P +A L
Sbjct: 1787 ASTLAPVLASTSAPVPASPLAPVSASASVSASVPASTSAAAITSSS-APASAPAPTPILA 1845
Query: 213 AASQPAAVPAAAS-------PAAAAPLAVNPAAAARAAAAP--AAACVQSVAESPATPLA 263
+ S PA+V AS A A+ A PA AA + AAP A + + A + + PLA
Sbjct: 1846 SVSTPASVTILASASIPILASALASTSAPTPAPAASSPAAPVITAPTIPASAPTASVPLA 1905
Query: 264 IAQPVSFPPAPVPCAVP 280
A + PAP P + P
Sbjct: 1906 PASASAPAPAPTPVSAP 1922
Score = 72.4 bits (176), Expect = 4e-13
Identities = 66/218 (30%), Positives = 95/218 (43%), Gaps = 15/218 (6%)
Query: 79 PWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPP 138
P S +P+ LT A A PA+ P +AP P A ++AS+ A+ P
Sbjct: 1763 PASTSAPLPATLTPVPASTSAPVPASTLAPVLAS-TSAPVPASPLAPVSASASVSASVPA 1821
Query: 139 AAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAA 198
+ AA+ ++ P +A P LA+V A S L +AS A AS +A PA
Sbjct: 1822 STSAAAITSSSAPASAPAPTPILASVSTPA---SVTILASASIPILASALASTSAPTPA- 1877
Query: 199 VCPGAAGPSAASLCAASQPAAVPAAASP----AAAAPLAVNPAAAARAAAAPAAACVQSV 254
P A+ P+A + A + PA+ P A+ P +A+AP +A A PA A Q+
Sbjct: 1878 --PAASSPAAPVITAPTIPASAPTASVPLAPASASAPAPAPTPVSAPNPAPPAPAQTQAQ 1935
Query: 255 AESPA-TPLAIAQPVSFPPAP---VPCAVPPLAAELLA 288
P PL S P P +P A P + +A
Sbjct: 1936 THKPVQNPLQTTSQSSKQPPPSIRLPSAQTPNGTDYVA 1973
Score = 65.9 bits (159), Expect = 4e-11
Identities = 57/195 (29%), Positives = 85/195 (43%), Gaps = 11/195 (5%)
Query: 81 SAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAA 140
S P + + L + + A+ +A P P A+ +A PA+ + +A PA+
Sbjct: 1745 SVPPLASAPLPPSTSASVPASTSAPLPATLTPVPASTSAPVPASTLAPVLASTSAPVPAS 1804
Query: 141 VPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVC 200
A V A+ A+ P + + AA+ ++A SA A P AS + A +
Sbjct: 1805 PLAPVSASASVSASVPASTSAAAITSSSAPASAP--------APTPILASVSTPASVTIL 1856
Query: 201 PGAAGPSAAS-LCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPA 259
A+ P AS L + S P PAA+SPAA A A+A A+ P A S
Sbjct: 1857 ASASIPILASALASTSAPTPAPAASSPAAPVITAPTIPASAPTASVPLAPASASAPAPAP 1916
Query: 260 TPLAIAQPVSFPPAP 274
TP++ P PPAP
Sbjct: 1917 TPVSAPNPA--PPAP 1929
Score = 60.8 bits (146), Expect = 1e-09
Identities = 53/168 (31%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 122 PAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASP 181
P A A + A A+VP A + P + A+ +A PA P AS A P
Sbjct: 1727 PRFAKKQATGIQQAQSSASVPPLASAPLPPSTSASVPASTSAPLPATLTPVPASTSAPVP 1786
Query: 182 LAAV-PAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAA 240
+ + P AS +A PA+ A SA++ +AS PA+ AAA +++AP A PA
Sbjct: 1787 ASTLAPVLASTSAPVPAS---PLAPVSASASVSASVPASTSAAAITSSSAP-ASAPAPTP 1842
Query: 241 RAAAAPAAACVQSVAESPATPLAIAQPVSFPPAPVPCAVPPLAAELLA 288
A+ A V +A + LA A + P P P A P A + A
Sbjct: 1843 ILASVSTPASVTILASASIPILASALASTSAPTPAPAASSPAAPVITA 1890
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 72.8 bits (177), Expect = 3e-13
Identities = 56/138 (40%), Positives = 61/138 (44%), Gaps = 8/138 (5%)
Query: 143 AAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPG 202
A PA R P P AAA AA P A P + AA+ A P AA+ AA AP + P
Sbjct: 106 ATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPA 165
Query: 203 AAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPL 262
GP A Q AA AA PA AAP AV P A R A PA A + P P
Sbjct: 166 QPGPRA-------QRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPP 218
Query: 263 AIAQPVSFPPAPVPCAVP 280
A Q PP P P P
Sbjct: 219 APPQQQQ-PPPPQPQPPP 235
Score = 67.4 bits (163), Expect = 1e-11
Identities = 54/159 (33%), Positives = 60/159 (37%), Gaps = 9/159 (5%)
Query: 97 RPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVP-AAVPAAVRPPAAG 155
R A PA R P P AAA AA P A P + AA+ PA P AA AA PP+ G
Sbjct: 104 RGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPG 163
Query: 156 PPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAAS 215
P P AA L A P A P A +P A P P A L
Sbjct: 164 P-------AQPGPRAQRAAPLAAPPPAPAAPPAVAPPA-GPRRAPPPAVAAREPPLPPPP 215
Query: 216 QPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSV 254
QP A P P P A RA A ++ V
Sbjct: 216 QPPAPPQQQQPPPPQPQPPPEGGAVRAGGAARPVSLREV 254
Score = 56.6 bits (135), Expect = 2e-08
Identities = 64/212 (30%), Positives = 77/212 (36%), Gaps = 40/212 (18%)
Query: 107 PPAAGPPAAAPAAVCPAAADPSAAS-------------------------LCA------A 135
PPA PP A AA AAA SAAS +C
Sbjct: 4 PPALPPPETAAAATTAAAASSSAASPHYQEWILDTIDSLRSRKARPDLERICRMVRRRHG 63
Query: 136 SPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVA 195
P A + ++ A + + Y AA A P +PAA A
Sbjct: 64 PEPERTRAELEKLIQQRAVLRVSYKGSISYRNAARVQPPRRGATPPAPPRAPRGAPAAAA 123
Query: 196 PAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAA--AAPAAACVQS 253
AA P A P + AA+ PA P AA+ AA AP + PA A AAP AA
Sbjct: 124 AAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAA---- 179
Query: 254 VAESPATPLAIAQPVS---FPPAPVPCAVPPL 282
+PA P A+A P PP V PPL
Sbjct: 180 PPPAPAAPPAVAPPAGPRRAPPPAVAAREPPL 211
Score = 49.3 bits (116), Expect = 4e-06
Identities = 48/148 (32%), Positives = 50/148 (33%), Gaps = 14/148 (9%)
Query: 61 RKTRGDSCGNTRNLYPLTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAA- 119
R RG P TP P P A AAA AA PP+ GP P A
Sbjct: 113 RAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQ 172
Query: 120 -VCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCA 178
P AA P A A+PPA P A P PPA AA P P A
Sbjct: 173 RAAPLAAPPPAP----AAPPAVAPPAGPRRAPPPA----VAAREPPLPPPPQPPAPPQQQ 224
Query: 179 ASPLAAVPAAASPAAVAPAAVCPGAAGP 206
P P P A GAA P
Sbjct: 225 QPP----PPQPQPPPEGGAVRAGGAARP 248
Score = 48.9 bits (115), Expect = 5e-06
Identities = 60/191 (31%), Positives = 71/191 (37%), Gaps = 18/191 (9%)
Query: 110 AGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPA-AVRPPAAGPPAAALAAVY--- 165
AGPPA P AA +AAS AASP ++R A P + +
Sbjct: 2 AGPPALPPPETAAAATTAAAASSSAASPHYQEWILDTIDSLRSRKARPDLERICRMVRRR 61
Query: 166 ----PAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAG--PSAASLCAASQPAA 219
P L + V S + A V P G P A PAA
Sbjct: 62 HGPEPERTRAELEKLIQQRAVLRVSYKGSISYRNAARVQPPRRGATPPAPPRAPRGAPAA 121
Query: 220 VPAAASPAAAA----PLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQ---PVSFPP 272
AAA P A P V AA ARA A AAA + PA P AQ P++ PP
Sbjct: 122 AAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPP 181
Query: 273 APVPCAVPPLA 283
P P A P +A
Sbjct: 182 -PAPAAPPAVA 191
Score = 48.9 bits (115), Expect = 5e-06
Identities = 48/143 (33%), Positives = 58/143 (40%), Gaps = 27/143 (18%)
Query: 147 AAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAV-------APAAV 199
A V+PP G A P+ +P AA AAA+P AP A
Sbjct: 97 ARVQPPRRG------------ATPPAPPRAPRGAPAAA--AAAAPPPTPAPPPPPAPVAA 142
Query: 200 CPGAAGPSAASLCAASQPAAVPAAASPAA--AAPLAVNPAAAARAAAAPAAACVQSVAES 257
A P AA+ A + P+ PA P A AAPLA P A AA PA A +
Sbjct: 143 AAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPA---PAAPPAVAPPAGPRRA 199
Query: 258 PATPLAIAQPVSFPPAPVPCAVP 280
P +A +P PP P P A P
Sbjct: 200 PPPAVAAREP-PLPPPPQPPAPP 221
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 71.6 bits (174), Expect = 7e-13
Identities = 74/225 (32%), Positives = 96/225 (42%), Gaps = 30/225 (13%)
Query: 83 PVVVPSALTRAVAWRP-AAAPAAVRPPAAGPPAAAPAAV----CPAAADPSAASLCAASP 137
P V P A A P +++P A P+A P +AP ++ P A PS A+ SP
Sbjct: 274 PQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSP 333
Query: 138 PAAV-------PAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAAS 190
P P A PP A PPA AL P A PS + SPL A P+ +
Sbjct: 334 TLQATHSFLPSPPLSPLATPPPQA-PPALALP---PLQAPPSPPASPPLSPL-ATPSPQA 388
Query: 191 PAAVA----PAAVCPGAAGPSAASLCAASQPAAVPAAASPA------AAAPLAVNPAAAA 240
P A+A A P + P A + P P+A P+ AA PL V P+ A
Sbjct: 389 PNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPA 448
Query: 241 RAAAAPAAA-CVQSVAESPATPLAIAQPVSFPPAPVPCAVPPLAA 284
+P+A Q+ A PL +A+P P AP A PPL A
Sbjct: 449 SPPMSPSATPPPQAPPPLAAPPLQLAKPP--PQAPPALATPPLQA 491
Score = 66.6 bits (161), Expect = 2e-11
Identities = 77/251 (30%), Positives = 102/251 (40%), Gaps = 45/251 (17%)
Query: 81 SAPVVVPSALTRAVAWRPAAAPAAVRPPAA----GPPAAAPAAVCPAAADPSAA------ 130
+AP + P + + P+A P+ PP+ PPA P+ + P+
Sbjct: 283 AAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFL 342
Query: 131 -----SLCAASPPAAVPA-AVPAAVRPPA--AGPPAAALAAVYPAAADPSAASLCAAS-- 180
S A PP A PA A+P PP+ A PP + LA P A + A L A
Sbjct: 343 PSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFS 402
Query: 181 --PLAAVPAAASPAA---VAPAAVCPGAAGPSAAS-------LCAASQPAAVPAAASPAA 228
P V A SP A V+P+A P A PS A+ AS P + A P A
Sbjct: 403 PPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQA 462
Query: 229 AAPLAVNPAAAAR-------AAAAPAAACVQS-----VAESPATPLAIAQPVSFPPAPVP 276
PLA P A+ A A P + S ++P +P A + P+S P P
Sbjct: 463 PPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSA-SLPMSPLATPPP 521
Query: 277 CAVPPLAAELL 287
A P LAA LL
Sbjct: 522 QAPPVLAAPLL 532
Score = 63.2 bits (152), Expect = 3e-10
Identities = 61/241 (25%), Positives = 87/241 (36%), Gaps = 43/241 (17%)
Query: 87 PSALTRAVAWRPAAAPAAVRPPAAGPPAAAP-----------AAVCPAAADPSAASLCAA 135
P++ + + + P ++PA P A G P A A P P + A
Sbjct: 228 PASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPAL 287
Query: 136 SPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAV---------- 185
P ++ P A P+ PP+ P + P A PS A+ SP
Sbjct: 288 GPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPL 347
Query: 186 -PAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAA------AAPLAVNPAA 238
P A P PA P P + P A P+ +P A AP + P+
Sbjct: 348 SPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSP 407
Query: 239 AARAAAAPAAACVQSVAESP---ATPLAIAQPVSFPPA------------PVPCAVPPLA 283
+A +P A+ S + +P A P A P+ PP+ P P A PPLA
Sbjct: 408 PVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLA 467
Query: 284 A 284
A
Sbjct: 468 A 468
Score = 63.2 bits (152), Expect = 3e-10
Identities = 68/226 (30%), Positives = 89/226 (39%), Gaps = 28/226 (12%)
Query: 71 TRNLYPLTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGP--PAAAPAAVCPAAA--- 125
T + P P S P A+A P AP + PPA+ P P A P+ P A
Sbjct: 338 THSFLPSPPLSPLATPPPQAPPALALPPLQAPPS--PPASPPLSPLATPSPQAPNALAVH 395
Query: 126 --------DPSAASLCAASPPAAVP---AAVPAAVRPPAAGPPAAALAAVYPAAADPSAA 174
PS SPPA+ P +A P + PP+ P + PA+ P +
Sbjct: 396 LLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPAS--PPMS 453
Query: 175 SLCAASPLAAVPAAASPAAVA--PAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPL 232
P A P AA P +A P P A P +L S PA+ P A + +A L
Sbjct: 454 PSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQAL--PSPPASFPGQAPFSPSASL 511
Query: 233 AVNPAAAARAAAAP--AAACVQSVAESPATPLAIAQPVSFPPAPVP 276
++P A A P AA +Q PA+P Q PP P P
Sbjct: 512 PMSPLATPPPQAPPVLAAPLLQVPPSPPASP--TLQAPRRPPTPGP 555
Score = 57.8 bits (138), Expect = 1e-08
Identities = 68/226 (30%), Positives = 90/226 (39%), Gaps = 35/226 (15%)
Query: 76 PLTPWSAPVVVPSALTRAVAWRPAAAPAA--VRPPAAGPPAAA----PAAVCPAAADPSA 129
P +P ++P + PSA A P AAP +PP PPA A A P A+ P
Sbjct: 443 PPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQ 502
Query: 130 ASLCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCA------ASPLA 183
A SP A++P + P A PP A PP A + + P++ +L A P
Sbjct: 503 APF---SPSASLPMS-PLATPPPQA-PPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDT 557
Query: 184 AVPAAASPAAVAPAAVCPGAAGPSAA---------SLCAASQPAAVPAAASPAAAAPLAV 234
+V A+AP P + PS+ S A S P + S A
Sbjct: 558 SVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAAS 617
Query: 235 NPAAAARAAAAPAAACVQSVAESPATPLAI----AQPVSFPPAPVP 276
P A AA PAA + PA PLA P+ +PPA P
Sbjct: 618 PPPDAELAACHPAA-----WSRGPAPPLAFRGAPGAPLPWPPATGP 658
Score = 54.7 bits (130), Expect = 9e-08
Identities = 55/200 (27%), Positives = 82/200 (41%), Gaps = 25/200 (12%)
Query: 98 PAAAPAA-VRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGP 156
P AP+A RPP GP + +A + +PS A+ P+A RP +
Sbjct: 181 PRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAA-------RRRPSAGGGLQRPASRSL 233
Query: 157 PAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQ 216
++A PA + PSA A + P A+ P V P + A +S
Sbjct: 234 SSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSS 293
Query: 217 PAAVPAAASPAA----------AAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQ 266
P A P+ ++P + +P A P+ A + +P S SP PL+
Sbjct: 294 PLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSP--PLS--- 348
Query: 267 PVSFPP--APVPCAVPPLAA 284
P++ PP AP A+PPL A
Sbjct: 349 PLATPPPQAPPALALPPLQA 368
Score = 53.1 bits (126), Expect = 3e-07
Identities = 68/252 (26%), Positives = 96/252 (38%), Gaps = 20/252 (7%)
Query: 37 TSDSGPPMSHDTQRLKSC-DTETKERKTRGDSCGNTRNLYPLTPWSAPVVVPSALTRAVA 95
T S PP S +R +T + G + G TR PL + + R A
Sbjct: 80 TRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRP-GPLGQKGLRISAEETVARGKA 138
Query: 96 W---RPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPP 152
+ +A A R +GP P+ PA A S A+ P P+A P RPP
Sbjct: 139 TEAPKRSALSAGARRDTSGPTPGTPS---PAMARRSRAAGTEVGLPRPAPSARP---RPP 192
Query: 153 AAGPPAAALAAVYPAAADPSAASLCAASPLAAV--PAAASPAAVAPAAVCPGAAGPSAAS 210
GP + +A + +PS A+ S + PA+ S ++ A P +GPSA
Sbjct: 193 TEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARG 252
Query: 211 LCAASQPAAVPAAASPAAAAPLAVNPAAAARAAA------APAAACVQSVAESPATPLAI 264
A + P A P V P A A +P A S SP+ P ++
Sbjct: 253 TPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSL 312
Query: 265 AQPVSFPPAPVP 276
Q + PPA P
Sbjct: 313 -QTLPSPPATPP 323
Score = 42.7 bits (99), Expect = 4e-04
Identities = 59/197 (29%), Positives = 76/197 (38%), Gaps = 32/197 (16%)
Query: 79 PWSAPVVVPSALTRAVAWRPAAAP---AAVRPPAAGPP----------AAAPAAVCPAAA 125
P AP V+ + L + V P A+P A RPP GP A AP P +
Sbjct: 520 PPQAPPVLAAPLLQ-VPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSR 578
Query: 126 DPSAA----SLCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYP----AAADPSAASLC 177
PS+ L S A + P +R +GP A A+ P AA P+A S
Sbjct: 579 SPSSTLSGPDLAGHSSSAT---STPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRG 635
Query: 178 AASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAA-PLAVNP 236
A PLA A +P PA GP +A P +A+PA A +P
Sbjct: 636 PAPPLAFRGAPGAPLPWPPAT------GPGSADGLCTIYETEGPESATPAPGALDPGPSP 689
Query: 237 AAAARAAAAPAAACVQS 253
+ AAA A A S
Sbjct: 690 GTSGGKAAAGAGAGASS 706
Score = 36.2 bits (82), Expect = 0.034
Identities = 36/125 (28%), Positives = 46/125 (36%), Gaps = 10/125 (8%)
Query: 100 AAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPPAA 159
+ P +R +GP A AA+ P A L A P A P A G P
Sbjct: 598 STPEELRGYDSGPEGGA------AASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLP 651
Query: 160 ALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAA 219
A P +AD P +A PA P A+ P PG +G AA+ A +
Sbjct: 652 WPPATGPGSADGLCTIYETEGPESATPA---PGALDPGP-SPGTSGGKAAAGAGAGASSR 707
Query: 220 VPAAA 224
P A
Sbjct: 708 SPKQA 712
Score = 32.0 bits (71), Expect = 0.65
Identities = 45/177 (25%), Positives = 57/177 (32%), Gaps = 38/177 (21%)
Query: 93 AVAWRPAA-APAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPP----------AAV 141
A A PAA AP + P G P P V PAA A+ P A +
Sbjct: 12 AAARTPAARAPGLLTPRPPGSPRPPPP-VTPAALRVLGAAGAVGRKPLAERAGGIGGATI 70
Query: 142 PAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCP 201
P + P A + PPA+ P A + S P S A P
Sbjct: 71 PESAPRAGPTRTSRPPASGRGERAPPAKNTS-------------PGPVSSPGRASGTTRP 117
Query: 202 GAAGPSAASLCAASQPAAVPAAASPAAAA-------------PLAVNPAAAARAAAA 245
G G + A A A +P +A P +PA A R+ AA
Sbjct: 118 GPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAA 174
Score = 31.6 bits (70), Expect = 0.84
Identities = 47/184 (25%), Positives = 57/184 (30%), Gaps = 13/184 (7%)
Query: 110 AGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAG-PPAAALAAVYPAA 168
AG A PAA P P PP PAA+ A G P A A A
Sbjct: 10 AGAAARTPAARAPGLLTPRPPG-SPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGA 68
Query: 169 ADPSAASLCAASPLAAVPAAASPAAVAPAA-VCPG-AAGPSAASLCAASQPAAVPAAASP 226
P +A + + PA+ PA PG + P AS P
Sbjct: 69 TIPESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRIS 128
Query: 227 AAAAPLAVNPAAAARAAAAPAAACVQSVAESPATP--------LAIAQPVSFP-PAPVPC 277
A A + +A A A + +P TP A V P PAP
Sbjct: 129 AEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSAR 188
Query: 278 AVPP 281
PP
Sbjct: 189 PRPP 192
>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
Length = 1711
Score = 71.6 bits (174), Expect = 7e-13
Identities = 71/235 (30%), Positives = 95/235 (40%), Gaps = 40/235 (17%)
Query: 79 PWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPP 138
P S P VP + V + A + A PP A PA APA PS +L + S P
Sbjct: 224 PLSVPAPVPHS--GLVPVQVATSVPAPSPPLAPVPALAPAP-------PSVPTLISDSNP 274
Query: 139 AAVPAAV--------------------PAAVRPPAAGPPAAALAAVYPAAADPSAASLCA 178
+V A+V PA + P + PP A + A P +A +
Sbjct: 275 LSVSASVLVPVPASAPPSGPVPLSAPAPAPLSVPVSAPPLALIQAPVPPSAPTLVLAPVP 334
Query: 179 ASPLAAVPAAASPAAVAPAAV-----CPGAAGPSAASLCAASQPAAVPAAA-----SPAA 228
LA +PA+ PAA AP +V P + PS +L A P VPA +PA
Sbjct: 335 TPVLAPMPASTPPAAPAPPSVPMPTPTPSSGPPSTPTLIPAFAPTPVPAPTPAPIFTPAP 394
Query: 229 AAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQ-PVSFPPAPVPCAVPPL 282
A PAA +A PA+ + V A A+ + P+SF P V PL
Sbjct: 395 TPMPAATPAAIPTSAPIPASFSLSRVCFPAAQAPAMQKVPLSFQPGTVLTPSQPL 449
Score = 71.2 bits (173), Expect = 1e-12
Identities = 63/207 (30%), Positives = 89/207 (42%), Gaps = 19/207 (9%)
Query: 81 SAPVVVPSALTRAVAWR-PAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPA 139
SA V+VP + + P +APA P + P +A P A+ A PSA +L A P
Sbjct: 278 SASVLVPVPASAPPSGPVPLSAPAPA--PLSVPVSAPPLALIQAPVPPSAPTLVLAPVPT 335
Query: 140 AVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAV 199
V A +PA+ P A PP+ + P++ PS +L A VP A +PA + A
Sbjct: 336 PVLAPMPASTPPAAPAPPSVPMPTPTPSSGPPSTPTLIPAFAPTPVP-APTPAPIFTPAP 394
Query: 200 CPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPA 259
P PAA PAA +A P + + + AA A ++ P
Sbjct: 395 TP--------------MPAATPAAIPTSAPIPASFSLSRVCFPAAQAPAMQKVPLSFQPG 440
Query: 260 TPLAIAQPVSFPPAPVPCAVPPLAAEL 286
T L +QP+ + P P C P A L
Sbjct: 441 TVLTPSQPLVYIPPP-SCGQPLSVATL 466
Score = 64.3 bits (155), Expect = 1e-10
Identities = 61/193 (31%), Positives = 83/193 (43%), Gaps = 41/193 (21%)
Query: 117 PAAVCPAAADPSAASLCAASP-----PAAVPAAVP--------AAVRPPAAGPPAAALAA 163
PA +CP A P +AS+ + P P +VPA VP A PA PP A + A
Sbjct: 200 PAPICPPA--PGSASVPHSVPDAFQVPLSVPAPVPHSGLVPVQVATSVPAPSPPLAPVPA 257
Query: 164 VYPAAADPSAASLCA--------ASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAAS 215
+ PA PS +L + AS L VPA+A P+ P + A P+ S+ ++
Sbjct: 258 LAPAP--PSVPTLISDSNPLSVSASVLVPVPASAPPSGPVPLS----APAPAPLSVPVSA 311
Query: 216 QPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFP-PAP 274
P A+ A P +A L + P A PA+ TP A P S P P P
Sbjct: 312 PPLALIQAPVPPSAPTLVLAPVPTPVLAPMPAS-----------TPPAAPAPPSVPMPTP 360
Query: 275 VPCAVPPLAAELL 287
P + PP L+
Sbjct: 361 TPSSGPPSTPTLI 373
Score = 63.5 bits (153), Expect = 2e-10
Identities = 67/225 (29%), Positives = 99/225 (44%), Gaps = 31/225 (13%)
Query: 78 TPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASP 137
+P AP+ P+ + +V P + P A + P + P + + P A S+ A SP
Sbjct: 197 SPLPAPICPPAPGSASV---PHSVPDAFQVPLSVPAPVPHSGLVPVQV---ATSVPAPSP 250
Query: 138 PAA-------VPAAVPAAVRPPAAGPPAAALAAVYPAAADPSA---ASLCAASPLAAVPA 187
P A P +VP + +A++ PA+A PS S A +PL +VP
Sbjct: 251 PLAPVPALAPAPPSVPTLISDSNPLSVSASVLVPVPASAPPSGPVPLSAPAPAPL-SVPV 309
Query: 188 AASPAAVAPAAVCPGAAGPSAASLCAASQP----AAVPAAASPAAAAPLAVNPAAAARAA 243
+A P A+ A V PSA +L A P A +PA+ PAA AP +V ++
Sbjct: 310 SAPPLALIQAPV-----PPSAPTLVLAPVPTPVLAPMPASTPPAAPAPPSVPMPTPTPSS 364
Query: 244 AAPAA-ACVQSVAESPA---TPLAIAQPVSFP-PAPVPCAVPPLA 283
P+ + + A +P TP I P P PA P A+P A
Sbjct: 365 GPPSTPTLIPAFAPTPVPAPTPAPIFTPAPTPMPAATPAAIPTSA 409
Score = 57.8 bits (138), Expect = 1e-08
Identities = 57/200 (28%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 79 PWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPP 138
P SAP P+ L+ V+ P A A PP+A AP P A + A++PP
Sbjct: 296 PLSAPA--PAPLSVPVSAPPLALIQAPVPPSAPTLVLAPVPT------PVLAPMPASTPP 347
Query: 139 AA-VPAAVPAAVRPPAAGPPAA-ALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAP 196
AA P +VP P++GPP+ L + P+ +P AA+PAA+
Sbjct: 348 AAPAPPSVPMPTPTPSSGPPSTPTLIPAFAPTPVPAPTPAPIFTPAPTPMPAATPAAIPT 407
Query: 197 AAVCPGAAGPSAASLCAASQPA--AVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSV 254
+A P + S AA PA VP + P + P+ P+ SV
Sbjct: 408 SAPIPASFSLSRVCFPAAQAPAMQKVPLSFQPGT----VLTPSQPLVYIPPPSCGQPLSV 463
Query: 255 AESPATPLAIAQPVSFPPAP 274
A P T L ++ ++ P P
Sbjct: 464 ATLPTT-LGVSSTLTLPVLP 482
Score = 37.7 bits (86), Expect = 0.012
Identities = 38/126 (30%), Positives = 53/126 (42%), Gaps = 24/126 (19%)
Query: 185 VPAAASPAAVAPAAVCPGAAGPSAA--SLCAASQ-PAAVP-------------AAASPAA 228
+P + + PA +CP A G ++ S+ A Q P +VP A + PA
Sbjct: 189 LPLVTTNFSPLPAPICPPAPGSASVPHSVPDAFQVPLSVPAPVPHSGLVPVQVATSVPAP 248
Query: 229 AAPLAVNPAAAARAAAAPAAACVQ---SVAESPATPLAIAQPVSFP-----PAPVPCAVP 280
+ PLA PA A + P SV+ S P+ + P S P PAP P +VP
Sbjct: 249 SPPLAPVPALAPAPPSVPTLISDSNPLSVSASVLVPVPASAPPSGPVPLSAPAPAPLSVP 308
Query: 281 PLAAEL 286
A L
Sbjct: 309 VSAPPL 314
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 71.2 bits (173), Expect = 1e-12
Identities = 75/229 (32%), Positives = 94/229 (41%), Gaps = 31/229 (13%)
Query: 76 PLTPWSAPVVVPSALTRAVAWRPAAAPAAVRP-PAAGPPAAAPAAVC-------PAAADP 127
PL SAP+ P T PA P P P PP P+++ PA A P
Sbjct: 545 PLQTASAPLTTPHLETPPC---PAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASP 601
Query: 128 SAASL-------CAASPPAAVPA-AVPAAVRPPA--AGPPAAALAAVYPAAADPSAASLC 177
L A PP A P A+P PP+ A PP + LA P A + A L
Sbjct: 602 PLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLL 661
Query: 178 AA--SPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVN 235
A SP + P A + A V P A PS A A+ P VP SP A+ P++ +
Sbjct: 662 QAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPP--SPPASPPMSPS 719
Query: 236 PAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFPPAPVPCAVPPLAA 284
+A AA +Q PA+P P+S P A P VPPL A
Sbjct: 720 ATPPPQAPPPLAAPPLQVPPSPPASP-----PMS-PSATPPPRVPPLLA 762
Score = 70.9 bits (172), Expect = 1e-12
Identities = 68/210 (32%), Positives = 88/210 (41%), Gaps = 26/210 (12%)
Query: 79 PWSAPVVVPSALTRAVAWRPAAAPAAVRPPA-AGPPAAAPAA------VCPAAADPSAAS 131
P S PV P + + P+A P + PP+ A PP P + + P+A P A
Sbjct: 668 PPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAP 727
Query: 132 LCAASPPAAVPAAVPAA--VRPPAAGPP-AAALAAVYPAAADPSAASLCAASPLAAVPAA 188
A+PP VP + PA+ + P A PP L A P PS + SPLA P
Sbjct: 728 PPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQ 787
Query: 189 ASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAP-- 246
A PA P P A P S PA+ P A + +A L ++P A A P
Sbjct: 788 APPALATP----PLQALP--------SPPASFPGQAPFSPSASLPMSPLATPPPQAPPVL 835
Query: 247 AAACVQSVAESPATPLAIAQPVSFPPAPVP 276
AA +Q PA+P Q PP P P
Sbjct: 836 AAPLLQVPPSPPASP--TLQAPRRPPTPGP 863
Score = 70.5 bits (171), Expect = 2e-12
Identities = 72/220 (32%), Positives = 94/220 (42%), Gaps = 28/220 (12%)
Query: 76 PLTPWSAPVV-VPSALTRAVAWRPAAAPAAVRPPAAGP--PAAAPAAVCPAAADPSAASL 132
PL+P + P P+AL + P + P + PP P P A+P V P+A PS A
Sbjct: 641 PLSPLATPSPQAPNALAVHLLQAPFSPPPS--PPVQAPFSPPASPP-VSPSATPPSQAPP 697
Query: 133 CAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPA 192
A+PP VP + PA+ PP + A P A P AA P SP+
Sbjct: 698 SLAAPPLQVPPSPPAS-------PPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPS 750
Query: 193 AVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQ 252
A P V P A P S PA++P + PLA P A A A P +
Sbjct: 751 ATPPPRVPPLLAAPPLQ--VPPSPPASLPMS-------PLAKPPPQAPPALATPPLQALP 801
Query: 253 S-----VAESPATPLAIAQPVSFPPAPVPCAVPPLAAELL 287
S ++P +P A + P+S P P A P LAA LL
Sbjct: 802 SPPASFPGQAPFSPSA-SLPMSPLATPPPQAPPVLAAPLL 840
Score = 67.4 bits (163), Expect = 1e-11
Identities = 70/214 (32%), Positives = 91/214 (42%), Gaps = 29/214 (13%)
Query: 76 PLTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAA 135
PL+P + P P +A P AP + P A PP + A P A + A L A
Sbjct: 610 PLSPLATP---PPQAPPXLALPPLQAPPS---PPASPPLSPLATPSPQAPNALAVHLLQA 663
Query: 136 --SPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAA 193
SPP + P P + P A PP + +A P+ A PS A A PL P+ +
Sbjct: 664 PFSPPPSPPVQAPFS---PPASPPVSP-SATPPSQAPPSLA----APPLQVPPSPPASPP 715
Query: 194 VAPAAVCPGAAGPSAAS---LCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAAC 250
++P+A P A P A+ S PA+ P SP+A P V P AA P +
Sbjct: 716 MSPSATPPPQAPPPLAAPPLQVPPSPPASPPM--SPSATPPPRVPPLLAAPPLQVPPS-- 771
Query: 251 VQSVAESPATPLAIAQPVSFPPAPVPCAVPPLAA 284
A P +PLA P AP A PPL A
Sbjct: 772 --PPASLPMSPLAKPP----PQAPPALATPPLQA 799
Score = 65.9 bits (159), Expect = 4e-11
Identities = 65/191 (34%), Positives = 86/191 (45%), Gaps = 22/191 (11%)
Query: 98 PAAAPAAVRPPAAGPPAAAPAAVCPAA--ADPSAASLCAASPPAAVPAAVPAAVRPPAAG 155
P +P A PP A P A P P + A P + L SP A AV ++ P +
Sbjct: 609 PPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHL-LQAPFSP 667
Query: 156 PPAAALAAVYPAAADPSAASLCAASPLAAVPA-AASPAAVAPAAVCPGAAGPSAASLCAA 214
PP+ + A + A P S A P A P+ AA P V P+ P A+ P + S A
Sbjct: 668 PPSPPVQAPFSPPASPPV-SPSATPPSQAPPSLAAPPLQVPPS---PPASPPMSPS---A 720
Query: 215 SQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFPPAP 274
+ P P A P AA PL V P+ A +P+A V PL A P+ PP+P
Sbjct: 721 TPP---PQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRV-----PPLLAAPPLQVPPSP 772
Query: 275 VPCAVP--PLA 283
P ++P PLA
Sbjct: 773 -PASLPMSPLA 782
Score = 61.6 bits (148), Expect = 8e-10
Identities = 72/264 (27%), Positives = 100/264 (37%), Gaps = 67/264 (25%)
Query: 76 PLTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAA 135
P +P ++P + PSA A P AAP PP+ PPA+ P + P+A P A
Sbjct: 707 PPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPS--PPASPPMS--PSATPPPRVPPLLA 762
Query: 136 SPPAAVPAAVPAAV------RPPAAGPPAAALAAVY------------------------ 165
+PP VP + PA++ +PP PPA A +
Sbjct: 763 APPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMS 822
Query: 166 PAAADPSAASLCAASPLAAVPAA--ASPAAVAP------------------AAVCPGAAG 205
P A P A A+PL VP + ASP AP A+ PG
Sbjct: 823 PLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPP 882
Query: 206 PSAASLCAASQPAAVPAAASPAAAAPLAV--------NPAAAARAAAAPAAACVQSV-AE 256
P + S + + +S A + P + AAA+ A AAC + +
Sbjct: 883 PPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSR 942
Query: 257 SPATPLAI----AQPVSFPPAPVP 276
PA PLA P+ +PPA P
Sbjct: 943 GPAPPLAFRGAPGAPLPWPPATGP 966
Score = 56.2 bits (134), Expect = 3e-08
Identities = 62/228 (27%), Positives = 89/228 (39%), Gaps = 26/228 (11%)
Query: 77 LTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAAS 136
L+ + P+ P+ + P A +P G A P V P D + A +S
Sbjct: 242 LSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSS 301
Query: 137 PPAAVPAAVPAAVRP-----------PAAGPPAAALAAVYPAA-----ADPSAASLCAAS 180
P A P+ RP PA PP+ LA P A A PS +L S
Sbjct: 302 SPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTL--PS 359
Query: 181 PLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAA 240
P A P+ A P+ P P A PS ++ P ++ + + A +PLA++ A
Sbjct: 360 PPATPPSQAPPSMTTP----PMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQAT 415
Query: 241 RAAAAPAAACVQS-VAESP-ATPLAIAQPVSFPPAPVPCAVPPLAAEL 286
+ +P S + SP T ++ P PA P PPL A L
Sbjct: 416 TSLGSPTLQATHSFLTMSPRQTQASLTSPSR--PASTPPDSPPLQAPL 461
Score = 52.8 bits (125), Expect = 4e-07
Identities = 51/189 (26%), Positives = 73/189 (38%), Gaps = 13/189 (6%)
Query: 98 PAAAPAA-VRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGP 156
P AP+A RPP GP + +A + +PS A+ P+A RP +
Sbjct: 190 PRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAA-------RRRPSAGGGLQRPASRSL 242
Query: 157 PAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQ 216
++A PA + PSA A + P A+ P V P + A +S
Sbjct: 243 SSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSS 302
Query: 217 PAAVPA----AASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFPP 272
P A P+ A P A P A + P A + SP+ P ++ Q + PP
Sbjct: 303 PLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSL-QTLPSPP 361
Query: 273 APVPCAVPP 281
A P PP
Sbjct: 362 ATPPSQAPP 370
Score = 48.1 bits (113), Expect = 9e-06
Identities = 46/184 (25%), Positives = 73/184 (39%), Gaps = 8/184 (4%)
Query: 97 RPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASL--CAASPPAAVPAAVPAAVRPPAA 154
RP+A RP + ++A PA + PSA A P P + A+RPP
Sbjct: 227 RPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGL-QALRPPQV 285
Query: 155 GPPAA-ALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAV--CPGAAGPSAASL 211
PP A A+ P ++ P A + + VP + A PA + P A P +
Sbjct: 286 TPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAP 345
Query: 212 CAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFP 271
+ S P ++ SP A P P+ AP + +Q++ + + P
Sbjct: 346 PSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPS--LQTIPPIQVPHSLTSPSLQAP 403
Query: 272 PAPV 275
P+P+
Sbjct: 404 PSPL 407
Score = 45.1 bits (105), Expect = 7e-05
Identities = 50/189 (26%), Positives = 77/189 (40%), Gaps = 29/189 (15%)
Query: 122 PAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASP 181
PA+ P + L A P ++PA+ P A P ++ ++P A S AS +P
Sbjct: 447 PASTPPDSPPLQA---PLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAP 503
Query: 182 LAA--VPAAASPAAVAPAAVCPGAAG---------PSAA--SLCAASQPAAVPAAASP-- 226
L++ +P + +++AP ++ A PS A L AS P P +P
Sbjct: 504 LSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPC 563
Query: 227 -------AAAAPLAVNPAAAARAAAAPAAACVQSVAESP--ATPLAIAQPVSFPP--APV 275
A +PL P + A P ++A P P P++ PP AP
Sbjct: 564 PAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPP 623
Query: 276 PCAVPPLAA 284
A+PPL A
Sbjct: 624 XLALPPLQA 632
Score = 42.7 bits (99), Expect = 4e-04
Identities = 59/197 (29%), Positives = 76/197 (38%), Gaps = 32/197 (16%)
Query: 79 PWSAPVVVPSALTRAVAWRPAAAP---AAVRPPAAGPP----------AAAPAAVCPAAA 125
P AP V+ + L + V P A+P A RPP GP A AP P +
Sbjct: 828 PPQAPPVLAAPLLQ-VPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSR 886
Query: 126 DPSAA----SLCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYP----AAADPSAASLC 177
PS+ L S A + P +R +GP A A+ P AA P+A S
Sbjct: 887 SPSSTLSGPDLAGHSSSAT---STPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRG 943
Query: 178 AASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAA-PLAVNP 236
A PLA A +P PA GP +A P +A+PA A +P
Sbjct: 944 PAPPLAFRGAPGAPLPWPPAT------GPGSADGLCTIYETEGPESATPAPGALDPGPSP 997
Query: 237 AAAARAAAAPAAACVQS 253
+ AAA A A S
Sbjct: 998 GTSGGKAAAGAGAGASS 1014
Score = 36.2 bits (82), Expect = 0.034
Identities = 36/125 (28%), Positives = 46/125 (36%), Gaps = 10/125 (8%)
Query: 100 AAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPPAA 159
+ P +R +GP A AA+ P A L A P A P A G P
Sbjct: 906 STPEELRGYDSGPEGGA------AASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLP 959
Query: 160 ALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAA 219
A P +AD P +A PA P A+ P PG +G AA+ A +
Sbjct: 960 WPPATGPGSADGLCTIYETEGPESATPA---PGALDPGP-SPGTSGGKAAAGAGAGASSR 1015
Query: 220 VPAAA 224
P A
Sbjct: 1016 SPKQA 1020
Score = 35.8 bits (81), Expect = 0.045
Identities = 49/173 (28%), Positives = 61/173 (35%), Gaps = 21/173 (12%)
Query: 93 AVAWRPAA-APAAVRPPAAGPPAAAPAAVCPAAADP-SAASLCAASPPAAVPAAVPAAVR 150
A A PAA AP + P G P P V PAA AA P A + A
Sbjct: 12 AAARTPAARAPGLLTPRPPGSPRPPPP-VTPAALRVLGAAGAVGRKPLAERAGGIGGATI 70
Query: 151 P---PAAGPPAAALAAVYPAAADPSAASLCAASPLA--AVPAAASPAAVAPAAVCPGAAG 205
P P AGP +A + A+ P A+ +P A P S A PG G
Sbjct: 71 PESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLG 130
Query: 206 PSAASLCAASQPAAVPAAASPAAAA-------------PLAVNPAAAARAAAA 245
+ A A A +P +A P +PA A R+ AA
Sbjct: 131 QKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAA 183
Score = 32.0 bits (71), Expect = 0.65
Identities = 49/193 (25%), Positives = 61/193 (31%), Gaps = 22/193 (11%)
Query: 110 AGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAV------PAAVRPP----AAGPPAA 159
AG A PAA P P PP PAA+ A R P A G A
Sbjct: 10 AGAAARTPAARAPGLLTPRPPG-SPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGA 68
Query: 160 ALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAA-VCPG-AAGPSAASLCAASQP 217
+ P A +A + +P + PA+ PA PG + P AS P
Sbjct: 69 TIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGP 128
Query: 218 AAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATP--------LAIAQPVS 269
A A + +A A A + +P TP A V
Sbjct: 129 LGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVG 188
Query: 270 FP-PAPVPCAVPP 281
P PAP PP
Sbjct: 189 LPRPAPSARPRPP 201
Score = 28.1 bits (61), Expect = 9.3
Identities = 34/146 (23%), Positives = 48/146 (32%), Gaps = 29/146 (19%)
Query: 126 DPSAASLCAASPPAAVPAAV----PAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASP 181
D + A A +P A P + P + RPP PAA AA P
Sbjct: 6 DKAKAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVL--------GAAGAVGRKP 57
Query: 182 LAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAAR 241
LA A + +A AGP+ ++ ++ PA+ P PA+
Sbjct: 58 LAERAGGIGGATIPESAP---RAGPTRSAGTSSRNPASRP--------------PASGRG 100
Query: 242 AAAAPAAACVQSVAESPATPLAIAQP 267
A PA SP +P
Sbjct: 101 ERAPPAKNTSPGPVSSPGRASGTTRP 126
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 70.5 bits (171), Expect = 2e-12
Identities = 69/221 (31%), Positives = 90/221 (40%), Gaps = 25/221 (11%)
Query: 82 APVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAV 141
AP +P+ + A P + PP+ P + P A PS A+ SP
Sbjct: 317 APPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQA 376
Query: 142 -------PAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAV 194
P P A PP A PPA AL P A PS + SPL A P+ +P A+
Sbjct: 377 THSFLPSPPLSPLATPPPQA-PPALALP---PLQAPPSPPASPPLSPL-ATPSPQAPNAL 431
Query: 195 A----PAAVCPGAAGPSAASLCAASQPAAVPAAASPA------AAAPLAVNPAAAARAAA 244
A A P + P A + P P+A P+ AA PL V P+ A
Sbjct: 432 AVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPM 491
Query: 245 APAAA-CVQSVAESPATPLAIAQPVSFPPAPVPCAVPPLAA 284
+P+A Q+ A PL +A+P P AP A PPL A
Sbjct: 492 SPSATPPPQAPPPLAAPPLQLAKPP--PQAPPALATPPLQA 530
Score = 65.5 bits (158), Expect = 5e-11
Identities = 65/200 (32%), Positives = 83/200 (41%), Gaps = 22/200 (11%)
Query: 98 PAAAPAAVRPPAAGPPAAAPAAVCPAA--ADPSAASLCAASPPAAVPAAVPAAVRPPAAG 155
P +P A PP A P A P P + A P + L SP A AV ++ P +
Sbjct: 384 PPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHL-LQAPFSP 442
Query: 156 PPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAAS 215
PP+ + A + A P SP A P+ A P+ AP P PS + S
Sbjct: 443 PPSPPVQAPFSPPASPPV------SPSATPPSQAPPSLAAPPLQVP----PSPPASPPMS 492
Query: 216 QPAAVPAAASPAAAAP---LAVNPAAAARAAAAPAAACVQS-----VAESPATPLAIAQP 267
A P A P AAP LA P A A A P + S ++P +P A + P
Sbjct: 493 PSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSA-SLP 551
Query: 268 VSFPPAPVPCAVPPLAAELL 287
+S P P A P LAA LL
Sbjct: 552 MSPLATPPPQAPPVLAAPLL 571
Score = 63.9 bits (154), Expect = 2e-10
Identities = 62/230 (26%), Positives = 85/230 (36%), Gaps = 50/230 (21%)
Query: 104 AVRPPAAGPP------AAAPAAVCPAAADPSAASLCAASPPAAVPA-----------AVP 146
A+RPP PP A P + P A +A+L + +PP +PA A P
Sbjct: 279 ALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPT-LPATPHSSSLTCQLATP 337
Query: 147 AAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAV-----------PAAASPAAVA 195
+ PP+ P + P A PS A+ SP P A P
Sbjct: 338 LPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAP 397
Query: 196 PAAVCPGAAGPSAASLCAASQPAAVPAAASPAA------AAPLAVNPAAAARAAAAPAAA 249
PA P P + P A P+ +P A AP + P+ +A +P A+
Sbjct: 398 PALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPAS 457
Query: 250 CVQSVAESP---ATPLAIAQPVSFPPA------------PVPCAVPPLAA 284
S + +P A P A P+ PP+ P P A PPLAA
Sbjct: 458 PPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAA 507
Score = 63.5 bits (153), Expect = 2e-10
Identities = 80/281 (28%), Positives = 108/281 (38%), Gaps = 42/281 (14%)
Query: 16 SPLEILAQSEALPKRYHDEKQTSDSGPPMSHDTQRLKSCDTETKERKTRGDSCGNTRNLY 75
+PL + S + P QT S PP + +Q S + T + T +
Sbjct: 336 TPLPLAPPSPSAPPSL----QTLPS-PPATPPSQATTSLGSPTLQA---------THSFL 381
Query: 76 PLTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGP--PAAAPAAVCPAAA-------- 125
P P S P A+A P AP + PPA+ P P A P+ P A
Sbjct: 382 PSPPLSPLATPPPQAPPALALPPLQAPPS--PPASPPLSPLATPSPQAPNALAVHLLQAP 439
Query: 126 ---DPSAASLCAASPPAAVP---AAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAA 179
PS SPPA+ P +A P + PP+ P + PA+ P +
Sbjct: 440 FSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPAS--PPMSPSATP 497
Query: 180 SPLAAVPAAASPAAVA--PAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPA 237
P A P AA P +A P P A P +L S PA+ P A + +A L ++P
Sbjct: 498 PPQAPPPLAAPPLQLAKPPPQAPPALATPPLQAL--PSPPASFPGQAPFSPSASLPMSPL 555
Query: 238 AAARAAAAP--AAACVQSVAESPATPLAIAQPVSFPPAPVP 276
A A P AA +Q PA+P Q PP P P
Sbjct: 556 ATPPPQAPPVLAAPLLQVPPSPPASP--TLQAPRRPPTPGP 594
Score = 58.2 bits (139), Expect = 8e-09
Identities = 60/199 (30%), Positives = 85/199 (42%), Gaps = 29/199 (14%)
Query: 97 RPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASL--CAASPPAAVPAAVPAAVRPPAA 154
RP+A RP + ++A PA + PSA A P P + A +RPP
Sbjct: 227 RPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQA-LRPPQV 285
Query: 155 GPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLC-- 212
PP A PA S++ L SP AA+ + A P A P ++SL
Sbjct: 286 TPPRKDAA---PALGPLSSSPLATPSPSAALQSQAPPTLPAT---------PHSSSLTCQ 333
Query: 213 -AASQPAAVPAAASPAAA----APLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQP 267
A P A P+ ++P + +P A P+ A + +P S SP PL+ P
Sbjct: 334 LATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSP--PLS---P 388
Query: 268 VSFPP--APVPCAVPPLAA 284
++ PP AP A+PPL A
Sbjct: 389 LATPPPQAPPALALPPLQA 407
Score = 57.8 bits (138), Expect = 1e-08
Identities = 68/226 (30%), Positives = 90/226 (39%), Gaps = 35/226 (15%)
Query: 76 PLTPWSAPVVVPSALTRAVAWRPAAAPAA--VRPPAAGPPAAA----PAAVCPAAADPSA 129
P +P ++P + PSA A P AAP +PP PPA A A P A+ P
Sbjct: 482 PPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQ 541
Query: 130 ASLCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCA------ASPLA 183
A SP A++P + P A PP A PP A + + P++ +L A P
Sbjct: 542 APF---SPSASLPMS-PLATPPPQA-PPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDT 596
Query: 184 AVPAAASPAAVAPAAVCPGAAGPSAA---------SLCAASQPAAVPAAASPAAAAPLAV 234
+V A+AP P + PS+ S A S P + S A
Sbjct: 597 SVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAAS 656
Query: 235 NPAAAARAAAAPAAACVQSVAESPATPLAI----AQPVSFPPAPVP 276
P A AA PAA + PA PLA P+ +PPA P
Sbjct: 657 PPPDAELAACHPAA-----WSRGPAPPLAFRGAPGAPLPWPPATGP 697
Score = 56.2 bits (134), Expect = 3e-08
Identities = 64/218 (29%), Positives = 89/218 (40%), Gaps = 38/218 (17%)
Query: 99 AAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPPA 158
+A A R +GP P+ PA A S A+ P P+A P RPP GP
Sbjct: 154 SALSAGARRDTSGPTPGTPS---PAMARRSRAAGTEVGLPRPAPSARP---RPPTEGPRK 207
Query: 159 AALAAVYPAAADPSAASLCAASPLAAV--PAAASPAAVAPAAVCPGAAGPSAAS------ 210
+ +A + +PS A+ S + PA+ S ++ A P +GPSA
Sbjct: 208 SVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPA 267
Query: 211 ---------LCAASQPAAVPA------AASPAAAAPLAV-NPAAAARAAAAPAAACV--- 251
L A P P A P +++PLA +P+AA ++ A P
Sbjct: 268 HPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHS 327
Query: 252 QSVAESPATPLAIAQPV-SFPPA----PVPCAVPPLAA 284
S+ ATPL +A P S PP+ P P A PP A
Sbjct: 328 SSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQA 365
Score = 42.7 bits (99), Expect = 4e-04
Identities = 59/197 (29%), Positives = 76/197 (38%), Gaps = 32/197 (16%)
Query: 79 PWSAPVVVPSALTRAVAWRPAAAP---AAVRPPAAGPP----------AAAPAAVCPAAA 125
P AP V+ + L + V P A+P A RPP GP A AP P +
Sbjct: 559 PPQAPPVLAAPLLQ-VPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSR 617
Query: 126 DPSAA----SLCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYP----AAADPSAASLC 177
PS+ L S A + P +R +GP A A+ P AA P+A S
Sbjct: 618 SPSSTLSGPDLAGHSSSAT---STPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRG 674
Query: 178 AASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAA-PLAVNP 236
A PLA A +P PA GP +A P +A+PA A +P
Sbjct: 675 PAPPLAFRGAPGAPLPWPPAT------GPGSADGLCTIYETEGPESATPAPGALDPGPSP 728
Query: 237 AAAARAAAAPAAACVQS 253
+ AAA A A S
Sbjct: 729 GTSGGKAAAGAGAGASS 745
Score = 36.2 bits (82), Expect = 0.034
Identities = 36/125 (28%), Positives = 46/125 (36%), Gaps = 10/125 (8%)
Query: 100 AAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPPAA 159
+ P +R +GP A AA+ P A L A P A P A G P
Sbjct: 637 STPEELRGYDSGPEGGA------AASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLP 690
Query: 160 ALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAA 219
A P +AD P +A PA P A+ P PG +G AA+ A +
Sbjct: 691 WPPATGPGSADGLCTIYETEGPESATPA---PGALDPGP-SPGTSGGKAAAGAGAGASSR 746
Query: 220 VPAAA 224
P A
Sbjct: 747 SPKQA 751
Score = 35.8 bits (81), Expect = 0.045
Identities = 49/173 (28%), Positives = 61/173 (35%), Gaps = 21/173 (12%)
Query: 93 AVAWRPAA-APAAVRPPAAGPPAAAPAAVCPAAADP-SAASLCAASPPAAVPAAVPAAVR 150
A A PAA AP + P G P P V PAA AA P A + A
Sbjct: 12 AAARTPAARAPGLLTPRPPGSPRPPPP-VTPAALRVLGAAGAVGRKPLAERAGGIGGATI 70
Query: 151 P---PAAGPPAAALAAVYPAAADPSAASLCAASPLA--AVPAAASPAAVAPAAVCPGAAG 205
P P AGP +A + A+ P A+ +P A P S A PG G
Sbjct: 71 PESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLG 130
Query: 206 PSAASLCAASQPAAVPAAASPAAAA-------------PLAVNPAAAARAAAA 245
+ A A A +P +A P +PA A R+ AA
Sbjct: 131 QKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAA 183
Score = 32.0 bits (71), Expect = 0.65
Identities = 49/193 (25%), Positives = 61/193 (31%), Gaps = 22/193 (11%)
Query: 110 AGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAV------PAAVRPP----AAGPPAA 159
AG A PAA P P PP PAA+ A R P A G A
Sbjct: 10 AGAAARTPAARAPGLLTPRPPG-SPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGA 68
Query: 160 ALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAA-VCPG-AAGPSAASLCAASQP 217
+ P A +A + +P + PA+ PA PG + P AS P
Sbjct: 69 TIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGP 128
Query: 218 AAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATP--------LAIAQPVS 269
A A + +A A A + +P TP A V
Sbjct: 129 LGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVG 188
Query: 270 FP-PAPVPCAVPP 281
P PAP PP
Sbjct: 189 LPRPAPSARPRPP 201
Score = 28.1 bits (61), Expect = 9.3
Identities = 34/146 (23%), Positives = 48/146 (32%), Gaps = 29/146 (19%)
Query: 126 DPSAASLCAASPPAAVPAAV----PAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASP 181
D + A A +P A P + P + RPP PAA AA P
Sbjct: 6 DKAKAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVL--------GAAGAVGRKP 57
Query: 182 LAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAAR 241
LA A + +A AGP+ ++ ++ PA+ P PA+
Sbjct: 58 LAERAGGIGGATIPESAP---RAGPTRSAGTSSRNPASRP--------------PASGRG 100
Query: 242 AAAAPAAACVQSVAESPATPLAIAQP 267
A PA SP +P
Sbjct: 101 ERAPPAKNTSPGPVSSPGRASGTTRP 126
>gi|116256363 transmembrane protease, serine 13 [Homo sapiens]
Length = 567
Score = 70.5 bits (171), Expect = 2e-12
Identities = 53/163 (32%), Positives = 67/163 (41%), Gaps = 17/163 (10%)
Query: 100 AAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPPAA 159
A+PA A P A+PA P A P+ AS AS PA P A P A
Sbjct: 9 ASPARTPSAGASPAQASPAGTPPGRASPAQASPAQAS---------PAGTPPGRASPAQA 59
Query: 160 ALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAA 219
+ A P A P AS ASP A PA ASPA + + G + + ++ S
Sbjct: 60 SPAGTPPGRASPGRASPAQASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRV 119
Query: 220 VPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPL 262
A+P A P+ +PA +A A A ESP T L
Sbjct: 120 YLVRATPVGAVPIRSSPARSAPATRA--------TRESPGTSL 154
Score = 68.6 bits (166), Expect = 6e-12
Identities = 50/134 (37%), Positives = 60/134 (44%), Gaps = 5/134 (3%)
Query: 140 AVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAV 199
A PA P+A PA PA P A P+ AS ASP P ASPA +PA
Sbjct: 9 ASPARTPSAGASPAQASPAGTP----PGRASPAQASPAQASPAGTPPGRASPAQASPAGT 64
Query: 200 CPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPA 259
PG A P AS AS A PA ASPA A+ + ++ A +A V A
Sbjct: 65 PPGRASPGRASPAQASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLVRA 124
Query: 260 TPLAIAQPVSFPPA 273
TP+ A P+ PA
Sbjct: 125 TPVG-AVPIRSSPA 137
Score = 60.8 bits (146), Expect = 1e-09
Identities = 39/109 (35%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 166 PAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAAS 225
PA + AS ASP P ASPA +PA P P AS AS P AS
Sbjct: 11 PARTPSAGASPAQASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTPPGRAS 70
Query: 226 PAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFPPAP 274
P A+P +PA A+ A A+PA A S++ S + + A+ S +P
Sbjct: 71 PGRASPAQASPAQASPARASPALA---SLSRSSSGRSSSARSASVTTSP 116
Score = 56.6 bits (135), Expect = 2e-08
Identities = 50/141 (35%), Positives = 61/141 (43%), Gaps = 11/141 (7%)
Query: 66 DSCGNTRNLYPLTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPA-AAPAAVCPAA 124
DS GN + ++P A T PA A A PA PP A+PA PA
Sbjct: 4 DSHGNASPARTPSAGASPAQASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAG 63
Query: 125 ADPSAASLCAASPPAAVPA-AVPAAVRPPAA-------GPPAAALAAVYPAAADPSAASL 176
P AS ASP A PA A PA P A G ++A +A P+ L
Sbjct: 64 TPPGRASPGRASPAQASPAQASPARASPALASLSRSSSGRSSSARSA--SVTTSPTRVYL 121
Query: 177 CAASPLAAVPAAASPAAVAPA 197
A+P+ AVP +SPA APA
Sbjct: 122 VRATPVGAVPIRSSPARSAPA 142
Score = 46.2 bits (108), Expect = 3e-05
Identities = 36/105 (34%), Positives = 44/105 (41%), Gaps = 16/105 (15%)
Query: 179 ASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAA 238
ASP A ASPA +PA PG A P A ASPA A+P P
Sbjct: 9 ASPARTPSAGASPAQASPAGTPPGRASP---------------AQASPAQASPAGTPPGR 53
Query: 239 AARAAAAPAAACVQSVAESPATPLAIAQPVSFPPAPVPCAVPPLA 283
A+ A A+PA + A+P A A P PA A+ L+
Sbjct: 54 ASPAQASPAGTPPGRASPGRASP-AQASPAQASPARASPALASLS 97
Score = 35.8 bits (81), Expect = 0.045
Identities = 27/84 (32%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
Query: 202 GAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATP 261
G A P+ AS A PA P A+P +PA A+ A P A + A TP
Sbjct: 7 GNASPARTPSAGASPAQASPAGTPPGRASPAQASPAQASPAGTPPGRAS-PAQASPAGTP 65
Query: 262 LAIAQPVSFPPAPV-PCAVPPLAA 284
A P PA P P A
Sbjct: 66 PGRASPGRASPAQASPAQASPARA 89
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 67.4 bits (163), Expect = 1e-11
Identities = 51/167 (30%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 76 PLTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPA---AAPAAVCPAAADPSAASL 132
P P P V+P +L V P A PA V PP PP + P +V P PS +S
Sbjct: 528 PPLPTMPPPVLPPSLPPPVM--PPALPATVPPPGMPPPVMPPSLPTSVPPPGMPPSLSS- 584
Query: 133 CAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPA 192
A PP P ++ +A PP PP+ + A P P L +A+P +P P
Sbjct: 585 -AGPPPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMPLP---PLSSATPPPGIPPPGVPQ 640
Query: 193 AVAP---AAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNP 236
+ P AA P A+ ++ + +PA +P S +A P +P
Sbjct: 641 GIPPQLTAAPVPPASSSQSSQVPEKPRPALLPTPVSFGSAPPTTYHP 687
Score = 57.8 bits (138), Expect = 1e-08
Identities = 50/176 (28%), Positives = 64/176 (36%), Gaps = 8/176 (4%)
Query: 112 PPAAAPAAVCPAAADPSAASLCAAS-PPAAVPAAVPAAVRPPAAGPPA--AALAAVYPAA 168
PP P + P + S PP +P A+PA V PP PP +L P
Sbjct: 517 PPPFVPYSQMPPPLPTMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVMPPSLPTSVPPP 576
Query: 169 ADPSAASLCAASPLAAVP--AAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASP 226
P + S P+ P ++A P V P A P L S +A P P
Sbjct: 577 GMPPSLSSAGPPPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMPLPPLS--SATPPPGIP 634
Query: 227 AAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFPPAPVPCAVPPL 282
P + P A A PA++ S P + PVSF AP PPL
Sbjct: 635 PPGVPQGIPPQLTA-APVPPASSSQSSQVPEKPRPALLPTPVSFGSAPPTTYHPPL 689
Score = 32.3 bits (72), Expect = 0.50
Identities = 29/136 (21%), Positives = 52/136 (38%), Gaps = 7/136 (5%)
Query: 98 PAAAPAAVRPPAAGPPAAAPAAVCPAAAD-PSAASLCAASPPAAVPAAVPAAVRPPAAGP 156
P P + P PP + + P+ + P + PP + +P A P+ P
Sbjct: 136 PGLVPMELESPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQSP 195
Query: 157 PAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQ 216
P+ + A P+ + S++S S + ++ + P + G S + L A
Sbjct: 196 PSQSYLAPTPSYSSSSSSSQSYLSHSQSYLPSSQASPSRP------SQGHSKSQLLAPPP 249
Query: 217 PAAVPAAASPAAAAPL 232
P+A P + PL
Sbjct: 250 PSAPPGNKTTVQQEPL 265
Score = 32.0 bits (71), Expect = 0.65
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 10/68 (14%)
Query: 214 ASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFPPA 273
+S+P P S P+ P + R +A PA + V P T PV PP
Sbjct: 1500 SSRPGMYPPPGSYRPPPPMGKPPGSIVRPSAPPARSSV------PVT----RPPVPIPPP 1549
Query: 274 PVPCAVPP 281
P P +PP
Sbjct: 1550 PPPPPLPP 1557
Score = 31.6 bits (70), Expect = 0.84
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Query: 102 PAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPP 157
P + RPP P P ++ +A P+ +S+ PP +P P PP PP
Sbjct: 1509 PGSYRPPP--PMGKPPGSIVRPSAPPARSSVPVTRPPVPIPPPPP----PPPLPPP 1558
>gi|210032509 hypothetical protein LOC100130302 [Homo sapiens]
Length = 887
Score = 66.2 bits (160), Expect = 3e-11
Identities = 66/209 (31%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 73 NLYPLTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAA-PAAVCPAAADPSAAS 131
N +P +P+ P + A+A AAA AA AA PA A AA PA A +A +
Sbjct: 478 NSFPPQQAGSPLKRPFSAAAAIAAAAAAAAAAAAAAAAAAPAPALAAAAAPALAAAAAPA 537
Query: 132 LCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASP 191
L AA+ PA PAA PA A PAAA +A + PS + A+ P A
Sbjct: 538 LAAAAAPAPAPAAAPA-----VAAAPAAAASAAPSHSQKPSVPLIQASRPCPAAQPPTKF 592
Query: 192 AAVAPA-AVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAAC 250
+APA + G+ G A ++ Q A ++ AP + APA A
Sbjct: 593 IKIAPAIQLRTGSTGLKAINVEGPVQGAQALGSSFKPVQAP----------GSGAPAPAG 642
Query: 251 VQ-SVAESPATPLAIAQP---VSFPPAPV 275
+ S +S PL A+P + PAP+
Sbjct: 643 ISGSDLQSSGGPLPDARPGAVQASSPAPL 671
Score = 64.3 bits (155), Expect = 1e-10
Identities = 53/131 (40%), Positives = 65/131 (49%), Gaps = 23/131 (17%)
Query: 151 PPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAAS 210
P AG P L + AAA +AA+ AA+ AA AAA+PA AA P A +A +
Sbjct: 482 PQQAGSP---LKRPFSAAAAIAAAAAAAAAAAAAA-AAAAPAPALAAAAAPALAAAAAPA 537
Query: 211 LCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSF 270
L AA+ PA PAAA AAAP AA A+AAP S ++ P+ PL A
Sbjct: 538 LAAAAAPAPAPAAAPAVAAAP-------AAAASAAP------SHSQKPSVPLIQAS---- 580
Query: 271 PPAPVPCAVPP 281
P P A PP
Sbjct: 581 --RPCPAAQPP 589
Score = 61.6 bits (148), Expect = 8e-10
Identities = 75/252 (29%), Positives = 100/252 (39%), Gaps = 25/252 (9%)
Query: 42 PPMSHDTQRLKSCDTETKERKTRGD-----SCGNTRNLYPLTPWSAP-----VVVPSALT 91
P D R S E+ + K +G S ++ L+ W P V V S+++
Sbjct: 395 PGSETDAGRAVSQAQESVQSKVKGPGKMSHSSSGPASVSQLSSWKTPEQPDPVWVQSSVS 454
Query: 92 RAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRP 151
P P P ++G ++ + A P AA+ AA AA AA
Sbjct: 455 GKGEKHPP--PRTQLPSSSGKISSGNSFPPQQAGSPLKRPFSAAAAIAAAAAAAAAAAAA 512
Query: 152 PAAGPPAAAL-AAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPS--- 207
AA PA AL AA PA A +A +L AA+ A PAAA A APAA A S
Sbjct: 513 AAAAAPAPALAAAAAPALAAAAAPALAAAAAPAPAPAAAPAVAAAPAAAASAAPSHSQKP 572
Query: 208 AASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAAC-----VQSVAESPATPL 262
+ L AS+P PAA P +A PA R + A VQ ++
Sbjct: 573 SVPLIQASRPC--PAAQPPTKFIKIA--PAIQLRTGSTGLKAINVEGPVQGAQALGSSFK 628
Query: 263 AIAQPVSFPPAP 274
+ P S PAP
Sbjct: 629 PVQAPGSGAPAP 640
Score = 50.4 bits (119), Expect = 2e-06
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 10/104 (9%)
Query: 181 PLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAA 240
P +P+++ + + A P AA+ AA AAA+ AAAA A PA A
Sbjct: 463 PRTQLPSSSGKISSGNSFPPQQAGSPLKRPFSAAAAIAAAAAAAAAAAAAAAAAAPAPAL 522
Query: 241 RAAAAPAAACVQSVAESPATPLAIAQPVSFPPAPVPCAVPPLAA 284
AAAAPA A A +PA A A PAP P A P +AA
Sbjct: 523 AAAAAPALA----AAAAPALAAAAA------PAPAPAAAPAVAA 556
Score = 32.7 bits (73), Expect = 0.38
Identities = 46/176 (26%), Positives = 62/176 (35%), Gaps = 17/176 (9%)
Query: 113 PAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADP- 171
P AP + PA A S + L ++ P +P A P AV+ A+ P P P
Sbjct: 629 PVQAPGSGAPAPAGISGSDLQSSGGP--LPDARPGAVQ--ASSPAPLQFFLNTPEGLRPL 684
Query: 172 SAASLCAASPLAAVPAAASPAAVA------PAAVCPGAAGPSAASLCAASQPAAVPAAAS 225
+ + S + P S V+ P A P GP ++L ++Q A PA
Sbjct: 685 TLLQVPQGSAVLTGPQQQSHQLVSLQQLQQPTAAHPPQPGPQGSALGLSTQGQAFPAQQL 744
Query: 226 PAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFPPAPVPCAVPP 281
L VNP A V S+ S P Q S P PP
Sbjct: 745 ------LKVNPTRARSGLQPQPQPAVLSLLGSAQVPQQGVQLPSVLRQQQPQPQPP 794
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 65.9 bits (159), Expect = 4e-11
Identities = 67/209 (32%), Positives = 80/209 (38%), Gaps = 25/209 (11%)
Query: 91 TRAVAWRPAAAPAAVRPPAAGPPAAAP--AAVCPAAADPSAASLCAASPPAAVPAAVPAA 148
T + W P A P GP +P A PAA PS A P P P A
Sbjct: 956 TPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPT--PPA 1013
Query: 149 VRPPA-AGPPAAAL----AAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGA 203
V PP+ G PAA A+ PAA PS AA+PL A +PAA P+
Sbjct: 1014 VTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPK-GAPTTPAATLPSP----K 1068
Query: 204 AGPSAASLCAASQPAAV--------PAAASPAAA--APLAVNPAAAARAAAAPAAACVQS 253
GP+ SL A P A PA SP A P A P+ A P +
Sbjct: 1069 GGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTT 1128
Query: 254 VAESPATPL-AIAQPVSFPPAPVPCAVPP 281
A +P +P +A P P A PP
Sbjct: 1129 PAATPPSPKGGLATPPPKGAPTTPAATPP 1157
Score = 64.3 bits (155), Expect = 1e-10
Identities = 68/221 (30%), Positives = 89/221 (40%), Gaps = 21/221 (9%)
Query: 78 TPWSAPVVVPSALTRAVAWRPAAAPAAVRPPA-AGPPAAAP----AAVCPAAADPSAASL 132
TP +A P + + A P AV PP+ G PAA P A+ PAA PS
Sbjct: 987 TPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGS 1046
Query: 133 CAASP-PAAVPAAVPAAVRPPAAGPPAAAL-AAVYPAAADPSAASLCAASPL---AAVPA 187
AA+P P P A + P GP +L A P AA P + A+P A +P
Sbjct: 1047 PAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPP 1106
Query: 188 AASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASP----AAAAPLAVNPAAAARAA 243
AA+P + P G A + AA+ P+ A+P A P A P+ A
Sbjct: 1107 AATPPSPKGGLATPPHKG--APTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLA 1164
Query: 244 AAPAAACVQSVAESPATP---LAIAQPVSFPPAPVPCAVPP 281
P + A +P +P LA P P P A PP
Sbjct: 1165 TPPPKGAPTTPAATPPSPKGGLATPSPKGAP--TTPAATPP 1203
Score = 61.2 bits (147), Expect = 1e-09
Identities = 59/213 (27%), Positives = 81/213 (38%), Gaps = 12/213 (5%)
Query: 83 PVVVPSALTRAVAWRP---AAAPAAVRPPAA-GPPAAAP--AAVCPAAADPSAASLCAAS 136
P P +L +A P A PA V PP+ G PA +P A P AA P + +
Sbjct: 1267 PAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGT 1326
Query: 137 PPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAP 196
PP PA P G P + +S +P AA P+ A+ P
Sbjct: 1327 PPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTP 1386
Query: 197 AAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAA-ARAAAAPAAACVQSVA 255
+ G A PS + PA +P + A A P+ AA ++ P A S+
Sbjct: 1387 PSPKRGPAIPSPKG--DPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLK 1444
Query: 256 ESPATPL---AIAQPVSFPPAPVPCAVPPLAAE 285
++PAT A P S +P PP E
Sbjct: 1445 KAPATSAPKGGPATPSSKGDPTLPAVTPPSPKE 1477
Score = 57.0 bits (136), Expect = 2e-08
Identities = 69/220 (31%), Positives = 86/220 (39%), Gaps = 31/220 (14%)
Query: 77 LTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPA----AGPPAAAPAAVCPAAADPSAASL 132
L P P PS + A PA + PA + P A A P S +
Sbjct: 880 LPPKETPT--PSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPK 937
Query: 133 CAASPPAAVP------AAVPA---AVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLA 183
A +PPAA P A P+ A PPAA PP+ PA P A +P A
Sbjct: 938 GAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGG---PATPSPKG----APTPPA 990
Query: 184 AVPAA--ASPAAVAP-AAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAV-NPAAA 239
A P + PA +P A P A P + A+ P A+ PAA P +PAA
Sbjct: 991 ATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAAT 1050
Query: 240 ARAAAAPA--AACVQSVAESPATPL---AIAQPVSFPPAP 274
AP AA + S PATP A P + PP+P
Sbjct: 1051 PLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSP 1090
Score = 57.0 bits (136), Expect = 2e-08
Identities = 66/222 (29%), Positives = 85/222 (38%), Gaps = 34/222 (15%)
Query: 77 LTPWSAPVVVPSALTRAVAWR-PAAAPA-----------AVRPPAAG-PPAAAPAAVC-- 121
LTP P V P +L +A A P PA AV PP+ PPA A
Sbjct: 1433 LTP---PAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSS 1489
Query: 122 PAAADPSAASLCAASPPAAVPA------AVPAAVRPPAAGPPAAALAAVYPAAADPSAAS 175
P A + A + A + PA +P+ A P++ R P A P A L+ PA P A
Sbjct: 1490 PKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIA-PTATLLSKKTPATLAPKEAL 1548
Query: 176 LCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVN 235
+ P VP+ A+ P AS A P+ A SP L +
Sbjct: 1549 I---PPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKE---LLIP 1602
Query: 236 PAAAA---RAAAAPAAACVQSVAESPATPLAIAQPVSFPPAP 274
PA + + A P A S + PATP P S P P
Sbjct: 1603 PAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTP 1644
Score = 55.1 bits (131), Expect = 7e-08
Identities = 74/236 (31%), Positives = 84/236 (35%), Gaps = 37/236 (15%)
Query: 76 PLTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAG-----PPAAAPAAVCPAAADPSA- 129
P TP + P L PAA P G PP AP PAA PS
Sbjct: 1126 PTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTT--PAATPPSPK 1183
Query: 130 ASLCAASP------PAAVPAAVPAAVRPPA-AGPPAAALAAVYPAAADPS-AASLCAASP 181
L SP PAA P + + P+ G P PAA PS L SP
Sbjct: 1184 GGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTT------PAATPPSPKGGLATPSP 1237
Query: 182 LAA--VPAAASPAAVAPAAVCP--GAAGPSAASLCAASQPAAVP---AAASPAAAAPLAV 234
A PAA P+ A P GA P AA+ + A P A +PA P +
Sbjct: 1238 KGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSP 1297
Query: 235 NPAAAA---RAAAAPAAACVQSVAESPATPLAIAQPVSFPPA---PVPCAVPPLAA 284
A + A P AA S SP TP P PPA P P P L A
Sbjct: 1298 KGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPT--PPAVTPPSPKGTPTLPA 1351
Score = 55.1 bits (131), Expect = 7e-08
Identities = 66/231 (28%), Positives = 93/231 (40%), Gaps = 25/231 (10%)
Query: 71 TRNLYPLTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAA 130
T + Y P +++P A+T + + + A P AV PP+ A PA + P
Sbjct: 1586 TPSTYKGAPSPKELLIPPAVT-SPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTP 1644
Query: 131 SLCAASP--PAAVPAAVPAAVRPPAAGPPA----AALAAVYPAAADPSAASLCAASPLAA 184
S SP PA+V + A V + G PA AL V A A S + A P
Sbjct: 1645 SSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPESTPIITA--PTRK 1702
Query: 185 VPAAASPAAVAPAAVCP------GAAGPSAASLCAASQPAAVPAA-------ASPAAAAP 231
P +A +P +CP G+ GP + A P ++ AS + P
Sbjct: 1703 GPQTKKSSATSPP-ICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGP 1761
Query: 232 LAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFP--PAPVPCAVP 280
LA + A+ A A V ES + A + PVS P P+PVP P
Sbjct: 1762 LAPPESKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSPVPTLPP 1812
Score = 54.3 bits (129), Expect = 1e-07
Identities = 72/237 (30%), Positives = 85/237 (35%), Gaps = 41/237 (17%)
Query: 76 PLTPWSAPVVVPSALTR-AVAWRPAAAP---AAVRPPAAGPPA---------------AA 116
P TP P A+T + PAA P A PPAA PP+
Sbjct: 1000 PATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTT 1059
Query: 117 PAAVCPAA-ADPSAASLCAA-SPPAAVPA------AVPA---AVRPPAAGPPAAALA-AV 164
PAA P+ P+ SL A +PPAA P A P+ A PPAA PP+ A
Sbjct: 1060 PAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLAT 1119
Query: 165 YPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAA 224
P P+ + SP + A P AP P A PS A P P
Sbjct: 1120 PPHKGAPTTPAATPPSPKGGL--ATPPPKGAPTT--PAATPPSPKGGLATPPPKGAP--T 1173
Query: 225 SPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFPPAPVPCAVPP 281
+PAA P A AP + SP LA P P P A PP
Sbjct: 1174 TPAATPPSPKGGLATPSPKGAPTTPA--ATPPSPKGGLATPSPKGAP--TTPAATPP 1226
Score = 53.9 bits (128), Expect = 2e-07
Identities = 65/246 (26%), Positives = 90/246 (36%), Gaps = 36/246 (14%)
Query: 53 SCDTETKERKTRGDSCGNTRNLYPLTPWSAPVVVPSALTRAVAWRPAA-APAAVRPPAAG 111
S +TK T+ S G + L+ +PV +++++ + +PA P
Sbjct: 800 SVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPP 859
Query: 112 PPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADP 171
P AP P +L PP P + P GP PA
Sbjct: 860 SPKGAPTPSAVTPLSPKGVTL----PPKETPTPSVVNLPFPKEGPAT-------PAPKQA 908
Query: 172 SAASLCAASPLAA--------VPAAASP--AAVAPAAVCPGAAGPSA--ASLCAASQPAA 219
A S+ ++SP A +PA+ SP A PAA P G A + A + PAA
Sbjct: 909 PALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAA 968
Query: 220 VPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPL---AIAQPVSFPPAP-- 274
P + A P + + A P AA S PATP A P PP+P
Sbjct: 969 TPPSPKGGPATP-------SPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKG 1021
Query: 275 VPCAVP 280
P A P
Sbjct: 1022 SPAATP 1027
Score = 53.5 bits (127), Expect = 2e-07
Identities = 64/227 (28%), Positives = 72/227 (31%), Gaps = 24/227 (10%)
Query: 76 PLTPWSAPVVVPSALTRAVAWRPAAAP----AAVRPPAAGP--------PAAAPAAVCPA 123
P TP +P A T A P A P A P P A PA
Sbjct: 1094 PATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPA 1153
Query: 124 AADPSAASLCAASPPAAVPAAVPAAVRPPAAG---PPAAALAAVYPAAADPS-AASLCAA 179
A PS A PP P PAA P G P+ A PAA PS L
Sbjct: 1154 ATPPSPKGGLATPPPKGAP-TTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATP 1212
Query: 180 SPLAA-VPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASP--AAAAPLAVNP 236
SP A AA+P + P G P PA P A P A P
Sbjct: 1213 SPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPP 1272
Query: 237 AAAARAAAAPAAACVQSVAESPATPLAIAQPVSFPP--APVPCAVPP 281
+ A P +P +P P + PP AP P A P
Sbjct: 1273 SLKGGLATPPHKGAPNPAVVTPPSPK--GGPATSPPKGAPTPPAATP 1317
Score = 50.1 bits (118), Expect = 2e-06
Identities = 50/216 (23%), Positives = 86/216 (39%), Gaps = 16/216 (7%)
Query: 81 SAPVVVPSALTRAVAWRPAAAPAAVRPPAAG--PPAAAPAAV--CPAAADPSAASLCAAS 136
++P V+P + +A A P A P PPA P ++ PA + P +S
Sbjct: 1403 TSPAVIPLSPKKAPA-TPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSS 1461
Query: 137 P-PAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPS---AASLCAASPLAAVPAAASPA 192
+PA P + + P A A ++ A A P+ A +L A P + A+P+
Sbjct: 1462 KGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPS 1521
Query: 193 A----VAPAAVCPGAAGPSAASLCAASQPAAVPAAA---SPAAAAPLAVNPAAAARAAAA 245
+ +AP A P+ + A P A+ + +PA P +++ A++
Sbjct: 1522 SRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASS 1581
Query: 246 PAAACVQSVAESPATPLAIAQPVSFPPAPVPCAVPP 281
P A + +P+ + P P+P PP
Sbjct: 1582 PPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPP 1617
Score = 48.9 bits (115), Expect = 5e-06
Identities = 53/221 (23%), Positives = 78/221 (35%), Gaps = 32/221 (14%)
Query: 78 TPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASP 137
TP +A P + A P AV PP+ PA + P+ S
Sbjct: 1311 TPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPT 1370
Query: 138 PAAVPAAVPAAVRPPAAGPPAAALAAVYPAA-ADPSAASLCAASPLAA------------ 184
P PAA P+ PA PP+ P+ DP++ ++ SP A
Sbjct: 1371 P---PAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAAT 1427
Query: 185 ------VPAAASPAAV--APAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNP 236
P A +P ++ APA P + +S + PA P + A
Sbjct: 1428 PSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATS 1487
Query: 237 AAAARAAAAPA--------AACVQSVAESPATPLAIAQPVS 269
++ +A A PA A S E PATP + P++
Sbjct: 1488 SSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIA 1528
Score = 48.1 bits (113), Expect = 9e-06
Identities = 59/224 (26%), Positives = 78/224 (34%), Gaps = 27/224 (12%)
Query: 76 PLTPWSA--PVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAA--APAAVCPAAADPSAAS 131
P TP S P+ + L A A+ PPA P+ PA P A + +S
Sbjct: 1517 PATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSS 1576
Query: 132 LCAASPPAAVPAA-----------VPAAVRPP----AAGPPAAALAAVYPAAADPSAASL 176
A+SPPA P+ +P AV P A PPA + A P+
Sbjct: 1577 KEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGT 1636
Query: 177 CAASPLAAVPAAASPAAVAPAAVCPGAAGPSAA-SLCAASQPAAV------PAAAS-PAA 228
+ P+ SP + A GA P A+ L A P A+ PA S P
Sbjct: 1637 PTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPESTPII 1696
Query: 229 AAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFPP 272
AP P +A +P S PL+ P P
Sbjct: 1697 TAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLP 1740
Score = 47.0 bits (110), Expect = 2e-05
Identities = 68/236 (28%), Positives = 81/236 (34%), Gaps = 43/236 (18%)
Query: 76 PLTPWSAPVVVPSALTRAVAWRPAAAPAAV-RPPAAGPPAAAPA--AVCP---------- 122
P TP S P A T + PA P + R PA P P AV P
Sbjct: 1360 PTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATP 1419
Query: 123 ----AAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCA 178
AA PS L +PPA P ++ A PA P A + DP+ ++
Sbjct: 1420 VTREGAATPSKGDL---TPPAVTPVSLKKA---PATSAPKGG-PATPSSKGDPTLPAVTP 1472
Query: 179 ASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAA---SQPAAVPAAAS-------PAA 228
SP PA A + P P A A S P VPA S P A
Sbjct: 1473 PSPKEP-PAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTA 1531
Query: 229 AAPLAVNPAA-AARAAAAPAAACVQSVAESPATPLAIAQP-------VSFPPAPVP 276
PA A + A P A V S ++PA P P S PPA P
Sbjct: 1532 TLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTP 1587
Score = 46.2 bits (108), Expect = 3e-05
Identities = 46/173 (26%), Positives = 66/173 (38%), Gaps = 16/173 (9%)
Query: 121 CPAAADP--SAASLCAASPPAAVPAAVPAAVRPPAAGPPA-------AALAAVYPAAADP 171
CP A P + A L +P +VP+ PPA PP + +A+ P A+ P
Sbjct: 708 CPVAPSPQNTCAPLATLVLAPEIPKSVPSPSLPPAGTPPGTKKVDGISHTSALAPVASSP 767
Query: 172 SAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAP 231
C A A+S + A P G S + +P +A P
Sbjct: 768 KE---CPTEDSGASATASSKGTLTYLADSPSPLGVSVSP--QTKRPPTKKGSAGPDTPIG 822
Query: 232 LAVNPAAAARAAAAPA-AACVQSVAESPATPLAIAQPVSFPPAPVPCAVPPLA 283
+P + A+ P + Q +SPAT + P S AP P AV PL+
Sbjct: 823 NLSSPVSPVEASFLPENSLSFQGSKDSPATTHS-PTPPSPKGAPTPSAVTPLS 874
Score = 42.4 bits (98), Expect = 5e-04
Identities = 63/249 (25%), Positives = 93/249 (37%), Gaps = 57/249 (22%)
Query: 76 PLTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPA-------AAPAAVCPAAADP- 127
P+ P P A P + P+ PPA PP + +A+ P A+ P
Sbjct: 709 PVAPSPQNTCAPLATLVLAPEIPKSVPSPSLPPAGTPPGTKKVDGISHTSALAPVASSPK 768
Query: 128 ------SAASLCAAS---------PPAAVPAAV-PAAVRPP----AAGP--PAAALAAVY 165
S AS A+S P+ + +V P RPP +AGP P L+
Sbjct: 769 ECPTEDSGASATASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLS--- 825
Query: 166 PAAADPSAASLCAASPLAAVPAAASPAAV-APAAVCP-GAAGPSAA-------------- 209
+ P AS + L+ + SPA +P P GA PSA
Sbjct: 826 -SPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKE 884
Query: 210 ----SLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIA 265
S+ P PA +P A L++ ++ +A A PA + + SP+ A
Sbjct: 885 TPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAP---KGIPASPSPKGAPT 941
Query: 266 QPVSFPPAP 274
P + PP+P
Sbjct: 942 PPAATPPSP 950
Score = 40.4 bits (93), Expect = 0.002
Identities = 43/179 (24%), Positives = 65/179 (36%), Gaps = 8/179 (4%)
Query: 108 PAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVP-----AAVRPPAAGPPAAALA 162
P PP + CP +A A+ + S A+ P VP + P P A
Sbjct: 43 PTLPPPCSPAPQQCPLSAANQASPFPSPSTIASTPLEVPFPQSSSGTALPLGTAPEAPTF 102
Query: 163 AVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPA 222
S A+L ASP+ A +P++ AP A+ A P + +A P + +
Sbjct: 103 LPNLIGPPISPAALALASPMIAPTLKGTPSSSAPLALV--ALAPHSVQKSSAFPPNLLTS 160
Query: 223 AASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAI-AQPVSFPPAPVPCAVP 280
S A A +V +A A + P + +E P + P P C P
Sbjct: 161 PPSVAVAESGSVITLSAPIAPSEPKTNLNKVPSEVVPNPKGTPSPPCIVSTVPYHCVTP 219
>gi|24497554 homeobox A13 [Homo sapiens]
Length = 388
Score = 64.7 bits (156), Expect = 9e-11
Identities = 58/167 (34%), Positives = 74/167 (44%), Gaps = 17/167 (10%)
Query: 139 AAVPAAVPAAVRPPAAG-----PPAAALAAVYPAAADPSAASLCAASP---LAAVPAAAS 190
AA AA AA A G P AAA + AA +AA+ AA+ L A PA +
Sbjct: 39 AAAAAAAAAAAAAGAGGGGFPHPAAAAAGGNFSVAAAAAAAAAAAANQCRNLMAHPAPLA 98
Query: 191 PAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAA-ARAAAAPAAA 249
P A + + PG A PSAA+ AA+ AA AAA+ ++ P PA A A +P +A
Sbjct: 99 PGAASAYSSAPGEAPPSAAAAAAAAAAAAAAAAAASSSGGPGPAGPAGAEAAKQCSPCSA 158
Query: 250 CVQSVAESPATPLA--------IAQPVSFPPAPVPCAVPPLAAELLA 288
QS + A P A+ P A CA P AA A
Sbjct: 159 AAQSSSGPAALPYGYFGSGYYPCARMGPHPNAIKSCAQPASAAAAAA 205
Score = 59.7 bits (143), Expect = 3e-09
Identities = 62/188 (32%), Positives = 79/188 (42%), Gaps = 36/188 (19%)
Query: 85 VVPSALTRAVAWRPAAAPAAVRPPAAGP-------PAAAPA------AVCPAAADPSAAS 131
+V L + + AAA AA AAG PAAA A A AAA +AA+
Sbjct: 26 LVADELNKNMEGAAAAAAAAAAAAAAGAGGGGFPHPAAAAAGGNFSVAAAAAAAAAAAAN 85
Query: 132 LC---AASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAA 188
C A P P A A P PP+AA A AAA +AA+ AA+ + P
Sbjct: 86 QCRNLMAHPAPLAPGAASAYSSAPGEAPPSAAAA----AAAAAAAAAAAAAASSSGGPGP 141
Query: 189 ASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLA------------VNP 236
A PA A C P +A+ ++S PAA+P + P A P
Sbjct: 142 AGPAGAEAAKQC----SPCSAAAQSSSGPAALPYGYFGSGYYPCARMGPHPNAIKSCAQP 197
Query: 237 AAAARAAA 244
A+AA AAA
Sbjct: 198 ASAAAAAA 205
Score = 57.4 bits (137), Expect = 1e-08
Identities = 56/175 (32%), Positives = 71/175 (40%), Gaps = 27/175 (15%)
Query: 93 AVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPP 152
A A AAA AA G P A AA A + S A+ AA+ AA P
Sbjct: 39 AAAAAAAAAAAAAGAGGGGFPHPAAAA---AGGNFSVAAAAAAAAAAAANQCRNLMAHPA 95
Query: 153 AAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLC 212
P AA+ + P A PSAA+ AA+ AAA+ AA A ++ PG AGP+ A
Sbjct: 96 PLAPGAASAYSSAPGEAPPSAAAAAAAAA-----AAAAAAAAASSSGGPGPAGPAGAEAA 150
Query: 213 AASQPAAVPAAASPAAAA-------------------PLAVNPAAAARAAAAPAA 248
P + A +S AA P A+ A +AAA AA
Sbjct: 151 KQCSPCSAAAQSSSGPAALPYGYFGSGYYPCARMGPHPNAIKSCAQPASAAAAAA 205
Score = 47.0 bits (110), Expect = 2e-05
Identities = 52/147 (35%), Positives = 63/147 (42%), Gaps = 27/147 (18%)
Query: 143 AAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPG 202
AA AA AA A +PAAA AA +V AAA+ AA A A C
Sbjct: 38 AAAAAAAAAAAAAAGAGGGGFPHPAAA--------AAGGNFSVAAAAAAAAAAAANQCRN 89
Query: 203 A-AGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQS-------- 253
A P+ + AAS ++ P A P+AAA AAAA AAAA AAA S
Sbjct: 90 LMAHPAPLAPGAASAYSSAPGEAPPSAAA------AAAAAAAAAAAAAAASSSGGPGPAG 143
Query: 254 ----VAESPATPLAIAQPVSFPPAPVP 276
A +P + A S PA +P
Sbjct: 144 PAGAEAAKQCSPCSAAAQSSSGPAALP 170
Score = 45.8 bits (107), Expect = 4e-05
Identities = 42/112 (37%), Positives = 54/112 (48%), Gaps = 19/112 (16%)
Query: 169 ADPSAASLCAASPLAAVPAAASPAAVA------PAAVCPG-----AAGPSAASLCAASQ- 216
AD ++ A+ AA AAA+ A PAA G AA +AA+ AA+Q
Sbjct: 28 ADELNKNMEGAAAAAAAAAAAAAAGAGGGGFPHPAAAAAGGNFSVAAAAAAAAAAAANQC 87
Query: 217 ------PAAV-PAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATP 261
PA + P AAS ++AP P+AAA AAAA AAA + A S P
Sbjct: 88 RNLMAHPAPLAPGAASAYSSAPGEAPPSAAAAAAAAAAAAAAAAAASSSGGP 139
Score = 39.3 bits (90), Expect = 0.004
Identities = 35/99 (35%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 81 SAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAA--ADPSAASLCAASPP 138
SAP P + A A AAA AA ++G P A A AA P +A+ ++S P
Sbjct: 107 SAPGEAPPSAAAAAAAAAAAAAAAAAASSSGGPGPAGPAGAEAAKQCSPCSAAAQSSSGP 166
Query: 139 AAVPAAVPAAVRPPAA--GP-PAAALAAVYPAAADPSAA 174
AA+P + P A GP P A + PA+A +AA
Sbjct: 167 AALPYGYFGSGYYPCARMGPHPNAIKSCAQPASAAAAAA 205
Score = 37.7 bits (86), Expect = 0.012
Identities = 45/149 (30%), Positives = 61/149 (40%), Gaps = 20/149 (13%)
Query: 76 PLTPWSAPVV--VPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLC 133
PL P +A P + A AAA AA AA + P PA A+ AA C
Sbjct: 96 PLAPGAASAYSSAPGEAPPSAAAAAAAAAAAAAAAAAASSSGGPGPAGPAGAE--AAKQC 153
Query: 134 AASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAA---ADPSAASLCAASPLAAVPAAAS 190
+ AA ++ PAA+ P + YP A P+A CA PA+A+
Sbjct: 154 SPCSAAAQSSSGPAAL------PYGYFGSGYYPCARMGPHPNAIKSCAQ------PASAA 201
Query: 191 PAAVAPAAVCPGAAGPSAASLCAASQPAA 219
AA A A AGP+A + ++ A
Sbjct: 202 -AAAAFADKYMDTAGPAAEEFSSRAKEFA 229
Score = 36.6 bits (83), Expect = 0.026
Identities = 35/90 (38%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Query: 202 GAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAA--CVQSVAE-SP 258
GAA +AA+ AA+ A PAAAA AAA AAAA AAA C +A +P
Sbjct: 37 GAAAAAAAAAAAAAAGAGGGGFPHPAAAAAGGNFSVAAAAAAAAAAAANQCRNLMAHPAP 96
Query: 259 ATPLAIAQPVSFPPAPVPCAVPPLAAELLA 288
P A + S P P A AA A
Sbjct: 97 LAPGAASAYSSAPGEAPPSAAAAAAAAAAA 126
>gi|239752265 PREDICTED: hypothetical protein XP_002348186 [Homo
sapiens]
Length = 225
Score = 63.9 bits (154), Expect = 2e-10
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 26/207 (12%)
Query: 79 PWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGP-----PAAAPAAVCPAAADPSAASLC 133
P + VV+PS +V P+ +P +V P P P+ +P +V P P + L
Sbjct: 13 PSTHSVVLPSRSPDSVVL-PSRSPDSVVLPPGSPDSVVLPSRSPDSVVPPPGSPDSVVLP 71
Query: 134 AASPPAAVP--AAVPAAVRPPAAG----PPAAALAAVYPAAADPSAASLCAASPLAAVPA 187
SP + VP + + V PP + PP + +V P P + L SP + VP
Sbjct: 72 PRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPP 131
Query: 188 AASPAAV-----APAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARA 242
SP +V +P +V P A P + + + A PAAA A P A R
Sbjct: 132 PGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGA------PGWAGRW 185
Query: 243 AAAPAAACVQSVAESPATPLAIAQPVS 269
P A +S + P+ P +++QP+S
Sbjct: 186 GRVPLA---RSPPQVPSRPPSLSQPLS 209
Score = 47.0 bits (110), Expect = 2e-05
Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 15/159 (9%)
Query: 128 SAASLCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPA 187
S S ++ +P+ P +V P+ P + L P + L + SP + VP
Sbjct: 7 SVGSTWPSTHSVVLPSRSPDSVVLPSRSPDSVVLPP-----GSPDSVVLPSRSPDSVVPP 61
Query: 188 AASPAAV-----APAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARA 242
SP +V +P +V P P + L S + VP SP + P +P +
Sbjct: 62 PGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPRSPDSVVPPPGSPDSVVLP 121
Query: 243 AAAPAAACVQSVAESPATPLAIAQPVSFPPAPVPCAVPP 281
+P SV P +P ++ P P + VP A P
Sbjct: 122 PRSP-----DSVVPPPGSPDSVVLPPRSPDSVVPPARSP 155
Score = 36.6 bits (83), Expect = 0.026
Identities = 36/115 (31%), Positives = 43/115 (37%), Gaps = 20/115 (17%)
Query: 77 LTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGP-----PAAAPAAVCPAAADPSAAS 131
L P S VVP P +P +V PP P P +P +V P P +
Sbjct: 90 LPPRSPDSVVP----------PPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVV 139
Query: 132 LCAASPPAAVPAAVPA-----AVRPPAAGPPAAALAAVYPAAADPSAASLCAASP 181
L SP + VP A A P + PPAAA A P A A SP
Sbjct: 140 LPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSP 194
>gi|4758392 forkhead box D1 [Homo sapiens]
Length = 465
Score = 62.4 bits (150), Expect = 4e-10
Identities = 63/199 (31%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 68 CGNTRNLYPLTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADP 127
CG L P P SA +A A A+ P + P PP AAA A P
Sbjct: 276 CGYGLQLPPYAPPSALFAAAAAAAAAAAFHPHSPP----PPPPPHGAAAELARTAFGYRP 331
Query: 128 SAASLCAASPPAAVPAAVPAAVRPPAAGPPAAALA-------AVYPAAADPSAASLCAAS 180
AA+P +PA+ A GP A+ALA ++ + P+AA+ AA
Sbjct: 332 HPLG-------AALPGPLPASA-AKAGGPGASALARSPFSIESIIGGSLGPAAAAAAAAQ 383
Query: 181 PLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAA 240
AA A+ SP+ VA A PG++G CAA AA PAAA ++ AAAA
Sbjct: 384 AAAAAQASPSPSPVA-APPAPGSSGGG----CAAQ------AAVGPAAALTRSLVAAAAA 432
Query: 241 RAAAAPAAACVQSVAESPA 259
A++ ++A + ++ + A
Sbjct: 433 AASSVSSSAALGTLHQGTA 451
Score = 60.5 bits (145), Expect = 2e-09
Identities = 59/183 (32%), Positives = 76/183 (41%), Gaps = 12/183 (6%)
Query: 87 PSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVP 146
P A + P ++ P PP+A AA AAA +AA + PP P
Sbjct: 262 PPPPPHAYGYGPYGCGYGLQLPPYAPPSALFAAAAAAAA--AAAFHPHSPPPPPPPHGAA 319
Query: 147 AAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGP 206
A + A G L A P SAA A + S ++ ++ P AA
Sbjct: 320 AELARTAFGYRPHPLGAALPGPLPASAAKAGGPGASALARSPFSIESIIGGSLGPAAAAA 379
Query: 207 SAASLCAASQ--PAAVPAAASPA-------AAAPLAVNPAAA-ARAAAAPAAACVQSVAE 256
+AA AA+Q P+ P AA PA AA AV PAAA R+ A AAA SV+
Sbjct: 380 AAAQAAAAAQASPSPSPVAAPPAPGSSGGGCAAQAAVGPAAALTRSLVAAAAAAASSVSS 439
Query: 257 SPA 259
S A
Sbjct: 440 SAA 442
Score = 60.1 bits (144), Expect = 2e-09
Identities = 63/183 (34%), Positives = 79/183 (43%), Gaps = 26/183 (14%)
Query: 100 AAPAAVRPPAAGPPAAAPA---------AVCPAAADPSAASLCAASPPAAVPAAVPAAVR 150
AA AA+ PPA PP A P A PSA AA AA AA
Sbjct: 252 AAAAALFPPAPPPPPHAYGYGPYGCGYGLQLPPYAPPSALFAAAA---AAAAAAAFHPHS 308
Query: 151 PPAAGPPAAALAAVYPAA----ADPSAASLCAASPLAAVPAA---ASPAAVAP---AAVC 200
PP PP A A + A P A+L P +A A AS A +P ++
Sbjct: 309 PPPPPPPHGAAAELARTAFGYRPHPLGAALPGPLPASAAKAGGPGASALARSPFSIESII 368
Query: 201 PGAAGPSAASLCAASQPAAVPAAASP----AAAAPLAVNPAAAARAAAAPAAACVQSVAE 256
G+ GP+AA+ AA AA A+ SP A AP + AA+AA PAAA +S+
Sbjct: 369 GGSLGPAAAAAAAAQAAAAAQASPSPSPVAAPPAPGSSGGGCAAQAAVGPAAALTRSLVA 428
Query: 257 SPA 259
+ A
Sbjct: 429 AAA 431
Score = 56.6 bits (135), Expect = 2e-08
Identities = 66/194 (34%), Positives = 81/194 (41%), Gaps = 38/194 (19%)
Query: 106 RPPAAGPPAAAP-------AAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAG--- 155
R P P AAA A A DP+AA+ A PPA P P G
Sbjct: 223 RQPLLPPNAAAAESLLLRGAGAAGGAGDPAAAA--ALFPPAPPPPPHAYGYGPYGCGYGL 280
Query: 156 --PPAAALAAVYPAAADPSAASLCAASPLAAVP------AAASPAAVA----PAAVCPGA 203
PP A +A++ AAA +AA+ A P + P AAA A A P +
Sbjct: 281 QLPPYAPPSALFAAAA--AAAAAAAFHPHSPPPPPPPHGAAAELARTAFGYRPHPLGAAL 338
Query: 204 AGPSAASLCAASQPAAVPAAASPAAAAPL---AVNPAAAARAAAAPAAACVQSVAESPAT 260
GP AS A P A A SP + + ++ PAAAA AAA AAA S + S
Sbjct: 339 PGPLPASAAKAGGPGASALARSPFSIESIIGGSLGPAAAAAAAAQAAAAAQASPSPS--- 395
Query: 261 PLAIAQPVSFPPAP 274
PV+ PPAP
Sbjct: 396 ------PVAAPPAP 403
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 61.6 bits (148), Expect = 8e-10
Identities = 55/169 (32%), Positives = 69/169 (40%), Gaps = 16/169 (9%)
Query: 76 PLTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAA 135
P P AP P + +A PA APA V P A P A A A PA A A +
Sbjct: 126 PSVPVPAPASTPPPVP-VLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPV 184
Query: 136 SPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAA------ADPSAASLCAASPLAAVPAAA 189
+ PA PA PA PA P AA + A +P A L S ++ PAA
Sbjct: 185 AAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQL--HSGISGRPAAG 242
Query: 190 SPAAVAPAAVCPGAAGPSAASLCAASQPAA-------VPAAASPAAAAP 231
+ AA A A +GP + A + +A VPA +AAP
Sbjct: 243 TAAASANGAAIKKLSGPLISDFFAKRKRSAPEKSSGDVPAPCPSPSAAP 291
Score = 56.6 bits (135), Expect = 2e-08
Identities = 64/200 (32%), Positives = 82/200 (41%), Gaps = 12/200 (6%)
Query: 94 VAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAAD--PSAASLCAASPPAAVP--AAVPAAV 149
+A RP A AV PP PAA A + PS AS P VP A PA
Sbjct: 93 LAPRPVAVAVAVSPPLE--PAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPA 150
Query: 150 RPPAAGPPAAALA-AVYPAAADPSAASLCAASPLAA-VPAAASPAAVAPAAVCPGAAGPS 207
P A P AA +A AV A P+ A A +P+AA PA A A APA A P
Sbjct: 151 PAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQ 210
Query: 208 AASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQ----SVAESPATPLA 263
++ A+Q + + ++ PAA AA+A AA + +++ A
Sbjct: 211 ESAEQGANQGQRGQEPLADQLHSGISGRPAAGTAAASANGAAIKKLSGPLISDFFAKRKR 270
Query: 264 IAQPVSFPPAPVPCAVPPLA 283
A S P PC P A
Sbjct: 271 SAPEKSSGDVPAPCPSPSAA 290
Score = 48.1 bits (113), Expect = 9e-06
Identities = 45/133 (33%), Positives = 53/133 (39%), Gaps = 23/133 (17%)
Query: 157 PAAALAAVYPAAADPSAASLC----AASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLC 212
P A AV P +P+A SL A L +VP A + P V A P+ A
Sbjct: 97 PVAVAVAVSPPL-EPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPA--- 152
Query: 213 AASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFPP 272
P A P AA P A A LA PA A A APA + A +PA P
Sbjct: 153 ----PVAAPVAA-PVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPA----------P 197
Query: 273 APVPCAVPPLAAE 285
AP P P A +
Sbjct: 198 APAPAPAPDAAPQ 210
Score = 45.1 bits (105), Expect = 7e-05
Identities = 41/129 (31%), Positives = 50/129 (38%), Gaps = 25/129 (19%)
Query: 176 LCAASPLAAVPAAASPAAVAPAAV----------------CPGAAGPSAASLCAASQPAA 219
L A P+A A + P A ++ P + P L A PA
Sbjct: 92 LLAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAP 151
Query: 220 VPAA---ASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFPPAPVP 276
P A A+P A A LA PA A A APA + A +PA A A PAP P
Sbjct: 152 APVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPA------PAPAP 205
Query: 277 CAVPPLAAE 285
A P +AE
Sbjct: 206 DAAPQESAE 214
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 61.6 bits (148), Expect = 8e-10
Identities = 55/169 (32%), Positives = 69/169 (40%), Gaps = 16/169 (9%)
Query: 76 PLTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAA 135
P P AP P + +A PA APA V P A P A A A PA A A +
Sbjct: 126 PSVPVPAPASTPPPVP-VLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPV 184
Query: 136 SPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAA------ADPSAASLCAASPLAAVPAAA 189
+ PA PA PA PA P AA + A +P A L S ++ PAA
Sbjct: 185 AAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQL--HSGISGRPAAG 242
Query: 190 SPAAVAPAAVCPGAAGPSAASLCAASQPAA-------VPAAASPAAAAP 231
+ AA A A +GP + A + +A VPA +AAP
Sbjct: 243 TAAASANGAAIKKLSGPLISDFFAKRKRSAPEKSSGDVPAPCPSPSAAP 291
Score = 56.6 bits (135), Expect = 2e-08
Identities = 64/200 (32%), Positives = 82/200 (41%), Gaps = 12/200 (6%)
Query: 94 VAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAAD--PSAASLCAASPPAAVP--AAVPAAV 149
+A RP A AV PP PAA A + PS AS P VP A PA
Sbjct: 93 LAPRPVAVAVAVSPPLE--PAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPA 150
Query: 150 RPPAAGPPAAALA-AVYPAAADPSAASLCAASPLAA-VPAAASPAAVAPAAVCPGAAGPS 207
P A P AA +A AV A P+ A A +P+AA PA A A APA A P
Sbjct: 151 PAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQ 210
Query: 208 AASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQ----SVAESPATPLA 263
++ A+Q + + ++ PAA AA+A AA + +++ A
Sbjct: 211 ESAEQGANQGQRGQEPLADQLHSGISGRPAAGTAAASANGAAIKKLSGPLISDFFAKRKR 270
Query: 264 IAQPVSFPPAPVPCAVPPLA 283
A S P PC P A
Sbjct: 271 SAPEKSSGDVPAPCPSPSAA 290
Score = 48.1 bits (113), Expect = 9e-06
Identities = 45/133 (33%), Positives = 53/133 (39%), Gaps = 23/133 (17%)
Query: 157 PAAALAAVYPAAADPSAASLC----AASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLC 212
P A AV P +P+A SL A L +VP A + P V A P+ A
Sbjct: 97 PVAVAVAVSPPL-EPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPA--- 152
Query: 213 AASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFPP 272
P A P AA P A A LA PA A A APA + A +PA P
Sbjct: 153 ----PVAAPVAA-PVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPA----------P 197
Query: 273 APVPCAVPPLAAE 285
AP P P A +
Sbjct: 198 APAPAPAPDAAPQ 210
Score = 45.1 bits (105), Expect = 7e-05
Identities = 41/129 (31%), Positives = 50/129 (38%), Gaps = 25/129 (19%)
Query: 176 LCAASPLAAVPAAASPAAVAPAAV----------------CPGAAGPSAASLCAASQPAA 219
L A P+A A + P A ++ P + P L A PA
Sbjct: 92 LLAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAP 151
Query: 220 VPAA---ASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFPPAPVP 276
P A A+P A A LA PA A A APA + A +PA A A PAP P
Sbjct: 152 APVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPA------PAPAP 205
Query: 277 CAVPPLAAE 285
A P +AE
Sbjct: 206 DAAPQESAE 214
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 61.6 bits (148), Expect = 8e-10
Identities = 55/169 (32%), Positives = 69/169 (40%), Gaps = 16/169 (9%)
Query: 76 PLTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAA 135
P P AP P + +A PA APA V P A P A A A PA A A +
Sbjct: 137 PSVPVPAPASTPPPVP-VLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPV 195
Query: 136 SPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAA------ADPSAASLCAASPLAAVPAAA 189
+ PA PA PA PA P AA + A +P A L S ++ PAA
Sbjct: 196 AAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQL--HSGISGRPAAG 253
Query: 190 SPAAVAPAAVCPGAAGPSAASLCAASQPAA-------VPAAASPAAAAP 231
+ AA A A +GP + A + +A VPA +AAP
Sbjct: 254 TAAASANGAAIKKLSGPLISDFFAKRKRSAPEKSSGDVPAPCPSPSAAP 302
Score = 56.6 bits (135), Expect = 2e-08
Identities = 64/200 (32%), Positives = 82/200 (41%), Gaps = 12/200 (6%)
Query: 94 VAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAAD--PSAASLCAASPPAAVP--AAVPAAV 149
+A RP A AV PP PAA A + PS AS P VP A PA
Sbjct: 104 LAPRPVAVAVAVSPPLE--PAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPA 161
Query: 150 RPPAAGPPAAALA-AVYPAAADPSAASLCAASPLAA-VPAAASPAAVAPAAVCPGAAGPS 207
P A P AA +A AV A P+ A A +P+AA PA A A APA A P
Sbjct: 162 PAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQ 221
Query: 208 AASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQ----SVAESPATPLA 263
++ A+Q + + ++ PAA AA+A AA + +++ A
Sbjct: 222 ESAEQGANQGQRGQEPLADQLHSGISGRPAAGTAAASANGAAIKKLSGPLISDFFAKRKR 281
Query: 264 IAQPVSFPPAPVPCAVPPLA 283
A S P PC P A
Sbjct: 282 SAPEKSSGDVPAPCPSPSAA 301
Score = 48.1 bits (113), Expect = 9e-06
Identities = 45/133 (33%), Positives = 53/133 (39%), Gaps = 23/133 (17%)
Query: 157 PAAALAAVYPAAADPSAASLC----AASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLC 212
P A AV P +P+A SL A L +VP A + P V A P+ A
Sbjct: 108 PVAVAVAVSPPL-EPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPA--- 163
Query: 213 AASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFPP 272
P A P AA P A A LA PA A A APA + A +PA P
Sbjct: 164 ----PVAAPVAA-PVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPA----------P 208
Query: 273 APVPCAVPPLAAE 285
AP P P A +
Sbjct: 209 APAPAPAPDAAPQ 221
Score = 45.1 bits (105), Expect = 7e-05
Identities = 41/129 (31%), Positives = 50/129 (38%), Gaps = 25/129 (19%)
Query: 176 LCAASPLAAVPAAASPAAVAPAAV----------------CPGAAGPSAASLCAASQPAA 219
L A P+A A + P A ++ P + P L A PA
Sbjct: 103 LLAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAP 162
Query: 220 VPAA---ASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFPPAPVP 276
P A A+P A A LA PA A A APA + A +PA A A PAP P
Sbjct: 163 APVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPA------PAPAP 216
Query: 277 CAVPPLAAE 285
A P +AE
Sbjct: 217 DAAPQESAE 225
>gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo
sapiens]
Length = 493
Score = 61.6 bits (148), Expect = 8e-10
Identities = 52/138 (37%), Positives = 62/138 (44%), Gaps = 13/138 (9%)
Query: 129 AASLCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAA 188
A+ CA SP A PA P + PAA P L V AA + +AA+ AA
Sbjct: 54 ASQGCAQSPFQAAPAPPPTP-QAPAAEPLQVDLLPVLAAAQESAAAA-----------AA 101
Query: 189 ASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAA-APLAVNPAAAARAAAAPA 247
A+ AA A AA P A S A QP A P P +A A A PA+AA AAA A
Sbjct: 102 AAAAAAAVAAAPPAPAAASTVDTAALKQPPAPPPPPPPVSAPAAEAAPPASAATIAAAAA 161
Query: 248 AACVQSVAESPATPLAIA 265
A V + P+A A
Sbjct: 162 TAVVAPTSTVAVAPVASA 179
Score = 61.2 bits (147), Expect = 1e-09
Identities = 58/182 (31%), Positives = 75/182 (41%), Gaps = 21/182 (11%)
Query: 39 DSGPPMSHDTQRLKSCDTETKERKTRGDSCGNTRNLYPLTPWSAPVVVPSALTRAVAWRP 98
+S PP Q E + R C + P AP P A P
Sbjct: 29 NSFPPPQGHAQNPLQVGAELQSRFFASQGCAQS----PFQAAPAPPPTPQA--------P 76
Query: 99 AAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAV---PAAVRPPAAG 155
AA P V AAA + AAA +AA+ AA+PPA A+ A +PPA
Sbjct: 77 AAEPLQV--DLLPVLAAAQESAAAAAAAAAAAAAVAAAPPAPAAASTVDTAALKQPPAPP 134
Query: 156 PPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVC----PGAAGPSAASL 211
PP ++A AA P++A+ AA+ AV A S AVAP A + GP +L
Sbjct: 135 PPPPPVSAPAAEAAPPASAATIAAAAATAVVAPTSTVAVAPVASALEKKTKSKGPYICAL 194
Query: 212 CA 213
CA
Sbjct: 195 CA 196
Score = 52.4 bits (124), Expect = 5e-07
Identities = 45/116 (38%), Positives = 54/116 (46%), Gaps = 12/116 (10%)
Query: 173 AASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPL 232
A+ CA SP A PA P APAA + AA+Q +A AAA+ AAAA +
Sbjct: 54 ASQGCAQSPFQAAPAPP-PTPQAPAAE---PLQVDLLPVLAAAQESAAAAAAAAAAAAAV 109
Query: 233 AVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFPPAPVPCAVPPLAAELLA 288
A P A A A+ AA Q A P P PVS P A A PP +A +A
Sbjct: 110 AAAPPAPAAASTVDTAALKQPPAPPPPPP-----PVSAPAAE---AAPPASAATIA 157
>gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo
sapiens]
Length = 477
Score = 61.6 bits (148), Expect = 8e-10
Identities = 52/138 (37%), Positives = 62/138 (44%), Gaps = 13/138 (9%)
Query: 129 AASLCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAA 188
A+ CA SP A PA P + PAA P L V AA + +AA+ AA
Sbjct: 54 ASQGCAQSPFQAAPAPPPTP-QAPAAEPLQVDLLPVLAAAQESAAAA-----------AA 101
Query: 189 ASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAA-APLAVNPAAAARAAAAPA 247
A+ AA A AA P A S A QP A P P +A A A PA+AA AAA A
Sbjct: 102 AAAAAAAVAAAPPAPAAASTVDTAALKQPPAPPPPPPPVSAPAAEAAPPASAATIAAAAA 161
Query: 248 AACVQSVAESPATPLAIA 265
A V + P+A A
Sbjct: 162 TAVVAPTSTVAVAPVASA 179
Score = 61.2 bits (147), Expect = 1e-09
Identities = 58/182 (31%), Positives = 75/182 (41%), Gaps = 21/182 (11%)
Query: 39 DSGPPMSHDTQRLKSCDTETKERKTRGDSCGNTRNLYPLTPWSAPVVVPSALTRAVAWRP 98
+S PP Q E + R C + P AP P A P
Sbjct: 29 NSFPPPQGHAQNPLQVGAELQSRFFASQGCAQS----PFQAAPAPPPTPQA--------P 76
Query: 99 AAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAV---PAAVRPPAAG 155
AA P V AAA + AAA +AA+ AA+PPA A+ A +PPA
Sbjct: 77 AAEPLQV--DLLPVLAAAQESAAAAAAAAAAAAAVAAAPPAPAAASTVDTAALKQPPAPP 134
Query: 156 PPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVC----PGAAGPSAASL 211
PP ++A AA P++A+ AA+ AV A S AVAP A + GP +L
Sbjct: 135 PPPPPVSAPAAEAAPPASAATIAAAAATAVVAPTSTVAVAPVASALEKKTKSKGPYICAL 194
Query: 212 CA 213
CA
Sbjct: 195 CA 196
Score = 52.4 bits (124), Expect = 5e-07
Identities = 45/116 (38%), Positives = 54/116 (46%), Gaps = 12/116 (10%)
Query: 173 AASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPL 232
A+ CA SP A PA P APAA + AA+Q +A AAA+ AAAA +
Sbjct: 54 ASQGCAQSPFQAAPAPP-PTPQAPAAE---PLQVDLLPVLAAAQESAAAAAAAAAAAAAV 109
Query: 233 AVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFPPAPVPCAVPPLAAELLA 288
A P A A A+ AA Q A P P PVS P A A PP +A +A
Sbjct: 110 AAAPPAPAAASTVDTAALKQPPAPPPPPP-----PVSAPAAE---AAPPASAATIA 157
Score = 28.9 bits (63), Expect = 5.5
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 176 LCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAP 231
LC P AA+ AA A AA AA P+A + ++ VP ++ P + P
Sbjct: 423 LCNKGTGEVCPMAAAAAAAAAAAAAAVAAPPTAVGSLSGAE--GVPVSSQPLPSQP 476
Score = 28.9 bits (63), Expect = 5.5
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Query: 211 LCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSF 270
LC P AA+ AAAA AAAA A AAP A V S++ + P++ +QP+
Sbjct: 423 LCNKGTGEVCPMAAAAAAAA------AAAAAAVAAPPTA-VGSLSGAEGVPVS-SQPLPS 474
Query: 271 PP 272
P
Sbjct: 475 QP 476
Score = 28.1 bits (61), Expect = 9.3
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 199 VCPGAAGPSAASLCAASQPAAVPAAA---SPAAAAPLAVNP 236
VCP AA +AA+ AA+ AA P A S A P++ P
Sbjct: 431 VCPMAAAAAAAAAAAAAAVAAPPTAVGSLSGAEGVPVSSQP 471
>gi|55743106 alpha 3 type VI collagen isoform 5 precursor [Homo
sapiens]
Length = 2971
Score = 58.2 bits (139), Expect = 8e-09
Identities = 53/162 (32%), Positives = 60/162 (37%), Gaps = 26/162 (16%)
Query: 55 DTETKERKTRGDSCGNTRNLYPLTPWSAPVVV--PSALTRAVAWRPAAAPAAVRP----- 107
D TK G N N +P S PV P T+ V +P
Sbjct: 2636 DQPTKNLVKFGHKQVNVPNNVTSSPTSNPVTTTKPVTTTKPVTTTTKPVTTTTKPVTIIN 2695
Query: 108 -PAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPPAAAL--AAV 164
P+ P AA PA P AA P A + A VRPP A PA A A
Sbjct: 2696 QPSVKPAAAKPAPAKPVAAKPVATKM--------------ATVRPPVAVKPATAAKPVAA 2741
Query: 165 YPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGP 206
PAA P AA+ AA P+A P P A PAA P P
Sbjct: 2742 KPAAVRPPAAA--AAKPVATKPEVPRPQAAKPAATKPATTKP 2781
Score = 51.6 bits (122), Expect = 8e-07
Identities = 47/150 (31%), Positives = 59/150 (39%), Gaps = 18/150 (12%)
Query: 84 VVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPA 143
V VP+ +T + P + P P P + + + P+ PA
Sbjct: 2650 VNVPNNVTSS----PTSNPVTTTKPVT---TTKPVTTTTKPVTTTTKPVTIINQPSVKPA 2702
Query: 144 AV-PAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPG 202
A PA +P AA P A +A V P A A AA P+AA PAA P A A
Sbjct: 2703 AAKPAPAKPVAAKPVATKMATVRPPVAVKPAT---AAKPVAAKPAAVRPPAAA------- 2752
Query: 203 AAGPSAASLCAASQPAAVPAAASPAAAAPL 232
AA P A AA PAA PA P+
Sbjct: 2753 AAKPVATKPEVPRPQAAKPAATKPATTKPM 2782
Score = 50.4 bits (119), Expect = 2e-06
Identities = 39/86 (45%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 163 AVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPG-AAGPSAASLCAASQPAAVP 221
+V PAAA P+ A AA P+A A P P AV P AA P AA A PAA
Sbjct: 2698 SVKPAAAKPAPAKPVAAKPVATKMATVRP----PVAVKPATAAKPVAAKPAAVRPPAA-- 2751
Query: 222 AAASPAAAAPLAVNPAAAARAAAAPA 247
AAA P A P P AA AA PA
Sbjct: 2752 AAAKPVATKPEVPRPQAAKPAATKPA 2777
Score = 47.0 bits (110), Expect = 2e-05
Identities = 36/89 (40%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Query: 188 AASPAAVAPAAVCPGAAGPSAASLCAASQPAAV-PA-AASPAAAAPLAVNPAAAARAAAA 245
+ PAA PA P AA P A + P AV PA AA P AA P AV P
Sbjct: 2698 SVKPAAAKPAPAKPVAAKPVATKMATVRPPVAVKPATAAKPVAAKPAAVRP--------- 2748
Query: 246 PAAACVQSVAESPATPL-AIAQPVSFPPA 273
PAAA + VA P P A+P + PA
Sbjct: 2749 PAAAAAKPVATKPEVPRPQAAKPAATKPA 2777
Score = 43.5 bits (101), Expect = 2e-04
Identities = 28/81 (34%), Positives = 35/81 (43%), Gaps = 10/81 (12%)
Query: 215 SQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESP--ATPLAIAQPVSF-- 270
+QP+ PAAA PA A P+A P A A P A + A P A P A+ P +
Sbjct: 2695 NQPSVKPAAAKPAPAKPVAAKPVATKMATVRPPVAVKPATAAKPVAAKPAAVRPPAAAAA 2754
Query: 271 ------PPAPVPCAVPPLAAE 285
P P P A P A +
Sbjct: 2755 KPVATKPEVPRPQAAKPAATK 2775
Score = 42.0 bits (97), Expect = 6e-04
Identities = 32/76 (42%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 213 AASQPA-AVPAAASPAAA------APLAVNPAAAARAAAAPAAACVQSVAESPATPLAIA 265
AA++PA A P AA P A P+AV PA AA+ AA AA V+ A + A P+A
Sbjct: 2702 AAAKPAPAKPVAAKPVATKMATVRPPVAVKPATAAKPVAAKPAA-VRPPAAAAAKPVATK 2760
Query: 266 QPVSFPPAPVPCAVPP 281
V P A P A P
Sbjct: 2761 PEVPRPQAAKPAATKP 2776
Score = 40.8 bits (94), Expect = 0.001
Identities = 32/76 (42%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 76 PLTPWSAPVVVPSALTRAVAWRPAAA-PAAVRPPAAGPPAAAPAAVCPAAADPSAASLCA 134
P+ A V P A+ A A +P AA PAAVRPPAA AA P A P P AA
Sbjct: 2716 PVATKMATVRPPVAVKPATAAKPVAAKPAAVRPPAAA--AAKPVATKPEVPRPQAAK--- 2770
Query: 135 ASPPAAVPAAVPAAVR 150
P A PA V+
Sbjct: 2771 --PAATKPATTKPMVK 2784
>gi|55743098 alpha 3 type VI collagen isoform 1 precursor [Homo
sapiens]
Length = 3177
Score = 58.2 bits (139), Expect = 8e-09
Identities = 53/162 (32%), Positives = 60/162 (37%), Gaps = 26/162 (16%)
Query: 55 DTETKERKTRGDSCGNTRNLYPLTPWSAPVVV--PSALTRAVAWRPAAAPAAVRP----- 107
D TK G N N +P S PV P T+ V +P
Sbjct: 2842 DQPTKNLVKFGHKQVNVPNNVTSSPTSNPVTTTKPVTTTKPVTTTTKPVTTTTKPVTIIN 2901
Query: 108 -PAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPPAAAL--AAV 164
P+ P AA PA P AA P A + A VRPP A PA A A
Sbjct: 2902 QPSVKPAAAKPAPAKPVAAKPVATKM--------------ATVRPPVAVKPATAAKPVAA 2947
Query: 165 YPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGP 206
PAA P AA+ AA P+A P P A PAA P P
Sbjct: 2948 KPAAVRPPAAA--AAKPVATKPEVPRPQAAKPAATKPATTKP 2987
Score = 51.6 bits (122), Expect = 8e-07
Identities = 47/150 (31%), Positives = 59/150 (39%), Gaps = 18/150 (12%)
Query: 84 VVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPA 143
V VP+ +T + P + P P P + + + P+ PA
Sbjct: 2856 VNVPNNVTSS----PTSNPVTTTKPVT---TTKPVTTTTKPVTTTTKPVTIINQPSVKPA 2908
Query: 144 AV-PAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPG 202
A PA +P AA P A +A V P A A AA P+AA PAA P A A
Sbjct: 2909 AAKPAPAKPVAAKPVATKMATVRPPVAVKPAT---AAKPVAAKPAAVRPPAAA------- 2958
Query: 203 AAGPSAASLCAASQPAAVPAAASPAAAAPL 232
AA P A AA PAA PA P+
Sbjct: 2959 AAKPVATKPEVPRPQAAKPAATKPATTKPM 2988
Score = 50.4 bits (119), Expect = 2e-06
Identities = 39/86 (45%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 163 AVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPG-AAGPSAASLCAASQPAAVP 221
+V PAAA P+ A AA P+A A P P AV P AA P AA A PAA
Sbjct: 2904 SVKPAAAKPAPAKPVAAKPVATKMATVRP----PVAVKPATAAKPVAAKPAAVRPPAA-- 2957
Query: 222 AAASPAAAAPLAVNPAAAARAAAAPA 247
AAA P A P P AA AA PA
Sbjct: 2958 AAAKPVATKPEVPRPQAAKPAATKPA 2983
Score = 47.0 bits (110), Expect = 2e-05
Identities = 36/89 (40%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Query: 188 AASPAAVAPAAVCPGAAGPSAASLCAASQPAAV-PA-AASPAAAAPLAVNPAAAARAAAA 245
+ PAA PA P AA P A + P AV PA AA P AA P AV P
Sbjct: 2904 SVKPAAAKPAPAKPVAAKPVATKMATVRPPVAVKPATAAKPVAAKPAAVRP--------- 2954
Query: 246 PAAACVQSVAESPATPL-AIAQPVSFPPA 273
PAAA + VA P P A+P + PA
Sbjct: 2955 PAAAAAKPVATKPEVPRPQAAKPAATKPA 2983
Score = 43.5 bits (101), Expect = 2e-04
Identities = 28/81 (34%), Positives = 35/81 (43%), Gaps = 10/81 (12%)
Query: 215 SQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESP--ATPLAIAQPVSF-- 270
+QP+ PAAA PA A P+A P A A P A + A P A P A+ P +
Sbjct: 2901 NQPSVKPAAAKPAPAKPVAAKPVATKMATVRPPVAVKPATAAKPVAAKPAAVRPPAAAAA 2960
Query: 271 ------PPAPVPCAVPPLAAE 285
P P P A P A +
Sbjct: 2961 KPVATKPEVPRPQAAKPAATK 2981
Score = 42.0 bits (97), Expect = 6e-04
Identities = 32/76 (42%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 213 AASQPA-AVPAAASPAAA------APLAVNPAAAARAAAAPAAACVQSVAESPATPLAIA 265
AA++PA A P AA P A P+AV PA AA+ AA AA V+ A + A P+A
Sbjct: 2908 AAAKPAPAKPVAAKPVATKMATVRPPVAVKPATAAKPVAAKPAA-VRPPAAAAAKPVATK 2966
Query: 266 QPVSFPPAPVPCAVPP 281
V P A P A P
Sbjct: 2967 PEVPRPQAAKPAATKP 2982
Score = 40.8 bits (94), Expect = 0.001
Identities = 32/76 (42%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 76 PLTPWSAPVVVPSALTRAVAWRPAAA-PAAVRPPAAGPPAAAPAAVCPAAADPSAASLCA 134
P+ A V P A+ A A +P AA PAAVRPPAA AA P A P P AA
Sbjct: 2922 PVATKMATVRPPVAVKPATAAKPVAAKPAAVRPPAAA--AAKPVATKPEVPRPQAAK--- 2976
Query: 135 ASPPAAVPAAVPAAVR 150
P A PA V+
Sbjct: 2977 --PAATKPATTKPMVK 2990
>gi|240255535 alpha 3 type VI collagen isoform 4 precursor [Homo
sapiens]
Length = 2570
Score = 58.2 bits (139), Expect = 8e-09
Identities = 53/162 (32%), Positives = 60/162 (37%), Gaps = 26/162 (16%)
Query: 55 DTETKERKTRGDSCGNTRNLYPLTPWSAPVVV--PSALTRAVAWRPAAAPAAVRP----- 107
D TK G N N +P S PV P T+ V +P
Sbjct: 2235 DQPTKNLVKFGHKQVNVPNNVTSSPTSNPVTTTKPVTTTKPVTTTTKPVTTTTKPVTIIN 2294
Query: 108 -PAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPPAAAL--AAV 164
P+ P AA PA P AA P A + A VRPP A PA A A
Sbjct: 2295 QPSVKPAAAKPAPAKPVAAKPVATKM--------------ATVRPPVAVKPATAAKPVAA 2340
Query: 165 YPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGP 206
PAA P AA+ AA P+A P P A PAA P P
Sbjct: 2341 KPAAVRPPAAA--AAKPVATKPEVPRPQAAKPAATKPATTKP 2380
Score = 51.6 bits (122), Expect = 8e-07
Identities = 47/150 (31%), Positives = 59/150 (39%), Gaps = 18/150 (12%)
Query: 84 VVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPA 143
V VP+ +T + P + P P P + + + P+ PA
Sbjct: 2249 VNVPNNVTSS----PTSNPVTTTKPVT---TTKPVTTTTKPVTTTTKPVTIINQPSVKPA 2301
Query: 144 AV-PAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPG 202
A PA +P AA P A +A V P A A AA P+AA PAA P A A
Sbjct: 2302 AAKPAPAKPVAAKPVATKMATVRPPVAVKPAT---AAKPVAAKPAAVRPPAAA------- 2351
Query: 203 AAGPSAASLCAASQPAAVPAAASPAAAAPL 232
AA P A AA PAA PA P+
Sbjct: 2352 AAKPVATKPEVPRPQAAKPAATKPATTKPM 2381
Score = 50.4 bits (119), Expect = 2e-06
Identities = 39/86 (45%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 163 AVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPG-AAGPSAASLCAASQPAAVP 221
+V PAAA P+ A AA P+A A P P AV P AA P AA A PAA
Sbjct: 2297 SVKPAAAKPAPAKPVAAKPVATKMATVRP----PVAVKPATAAKPVAAKPAAVRPPAA-- 2350
Query: 222 AAASPAAAAPLAVNPAAAARAAAAPA 247
AAA P A P P AA AA PA
Sbjct: 2351 AAAKPVATKPEVPRPQAAKPAATKPA 2376
Score = 47.0 bits (110), Expect = 2e-05
Identities = 36/89 (40%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Query: 188 AASPAAVAPAAVCPGAAGPSAASLCAASQPAAV-PA-AASPAAAAPLAVNPAAAARAAAA 245
+ PAA PA P AA P A + P AV PA AA P AA P AV P
Sbjct: 2297 SVKPAAAKPAPAKPVAAKPVATKMATVRPPVAVKPATAAKPVAAKPAAVRP--------- 2347
Query: 246 PAAACVQSVAESPATPL-AIAQPVSFPPA 273
PAAA + VA P P A+P + PA
Sbjct: 2348 PAAAAAKPVATKPEVPRPQAAKPAATKPA 2376
Score = 43.5 bits (101), Expect = 2e-04
Identities = 28/81 (34%), Positives = 35/81 (43%), Gaps = 10/81 (12%)
Query: 215 SQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESP--ATPLAIAQPVSF-- 270
+QP+ PAAA PA A P+A P A A P A + A P A P A+ P +
Sbjct: 2294 NQPSVKPAAAKPAPAKPVAAKPVATKMATVRPPVAVKPATAAKPVAAKPAAVRPPAAAAA 2353
Query: 271 ------PPAPVPCAVPPLAAE 285
P P P A P A +
Sbjct: 2354 KPVATKPEVPRPQAAKPAATK 2374
Score = 42.0 bits (97), Expect = 6e-04
Identities = 32/76 (42%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 213 AASQPA-AVPAAASPAAA------APLAVNPAAAARAAAAPAAACVQSVAESPATPLAIA 265
AA++PA A P AA P A P+AV PA AA+ AA AA V+ A + A P+A
Sbjct: 2301 AAAKPAPAKPVAAKPVATKMATVRPPVAVKPATAAKPVAAKPAA-VRPPAAAAAKPVATK 2359
Query: 266 QPVSFPPAPVPCAVPP 281
V P A P A P
Sbjct: 2360 PEVPRPQAAKPAATKP 2375
Score = 40.8 bits (94), Expect = 0.001
Identities = 32/76 (42%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 76 PLTPWSAPVVVPSALTRAVAWRPAAA-PAAVRPPAAGPPAAAPAAVCPAAADPSAASLCA 134
P+ A V P A+ A A +P AA PAAVRPPAA AA P A P P AA
Sbjct: 2315 PVATKMATVRPPVAVKPATAAKPVAAKPAAVRPPAAA--AAKPVATKPEVPRPQAAK--- 2369
Query: 135 ASPPAAVPAAVPAAVR 150
P A PA V+
Sbjct: 2370 --PAATKPATTKPMVK 2383
>gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo
sapiens]
Length = 459
Score = 57.4 bits (137), Expect = 1e-08
Identities = 71/250 (28%), Positives = 87/250 (34%), Gaps = 50/250 (20%)
Query: 64 RGDSCGNTRNLYPLTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAA-------GPPAAA 116
RG SCG R PL + P V W P AP + PPA P A+
Sbjct: 70 RGKSCGARRAALPLLRYPPE---PGVFPFLVLWTPPFAPGRISPPAPQAFLAQRSPARAS 126
Query: 117 PAA----------VCPA-----------AADPSAASLCAASPPAAVPAAVPAAVRPPAAG 155
P PA AA SAA+ SP A P + +A R P A
Sbjct: 127 PGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTSSATRVPRA- 185
Query: 156 PPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGA-----------A 204
++ A+ P A P A + S A P PA PA+ PGA
Sbjct: 186 -RRSSRRALQPRHAAPDAPGAPSRSTSQATP---PPAPRFPASRRPGAPRLLSRTRQREL 241
Query: 205 GPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAI 264
G SAA A S + PA+A P A R A P + + P +P
Sbjct: 242 GGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATPGEGRLPDFEKQPHSPRER 301
Query: 265 AQPVSFPPAP 274
P PPAP
Sbjct: 302 LDP---PPAP 308
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.122 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,398,468
Number of Sequences: 37866
Number of extensions: 917616
Number of successful extensions: 31368
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 1487
Number of HSP's that attempted gapping in prelim test: 8351
Number of HSP's gapped (non-prelim): 11713
length of query: 288
length of database: 18,247,518
effective HSP length: 101
effective length of query: 187
effective length of database: 14,423,052
effective search space: 2697110724
effective search space used: 2697110724
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.