Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 169211438
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169211438 PREDICTED: hypothetical protein [Homo sapiens]
(200 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169211438 PREDICTED: hypothetical protein [Homo sapiens] 422 e-119
gi|169211910 PREDICTED: hypothetical protein [Homo sapiens] 422 e-119
gi|169211055 PREDICTED: hypothetical protein [Homo sapiens] 422 e-119
gi|239750966 PREDICTED: hypothetical protein XP_002347633 [Homo ... 54 9e-08
gi|239745372 PREDICTED: hypothetical protein XP_002343483 [Homo ... 54 9e-08
gi|239753114 PREDICTED: hypothetical protein [Homo sapiens] 47 8e-06
gi|239752303 PREDICTED: hypothetical protein XP_002348193 [Homo ... 42 3e-04
gi|239746814 PREDICTED: hypothetical protein XP_002343855 [Homo ... 42 3e-04
gi|239754458 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001
gi|239749008 PREDICTED: hypothetical protein XP_002346879 [Homo ... 40 0.001
gi|239743028 PREDICTED: hypothetical protein XP_002342721 [Homo ... 40 0.001
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 40 0.001
gi|21265034 ADAM metallopeptidase with thrombospondin type 1 mot... 40 0.001
gi|239748099 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001
gi|239748777 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|239752764 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
gi|239748415 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
gi|239742343 PREDICTED: hypothetical protein XP_002342497 [Homo ... 39 0.002
gi|19924099 synapsin I isoform Ia [Homo sapiens] 39 0.002
gi|19924097 synapsin I isoform Ib [Homo sapiens] 39 0.002
gi|239741003 PREDICTED: hypothetical protein LOC643965 [Homo sap... 39 0.003
gi|169207782 PREDICTED: hypothetical protein [Homo sapiens] 39 0.004
gi|169207076 PREDICTED: hypothetical protein [Homo sapiens] 39 0.004
gi|27477095 nuclear receptor binding SET domain protein 1 isofor... 38 0.005
gi|19923586 nuclear receptor binding SET domain protein 1 isofor... 38 0.005
gi|226442744 hypothetical protein LOC643965 [Homo sapiens] 37 0.009
gi|239753856 PREDICTED: hypothetical protein [Homo sapiens] 37 0.009
gi|169213235 PREDICTED: hypothetical protein [Homo sapiens] 37 0.009
gi|169210481 PREDICTED: hypothetical protein [Homo sapiens] 37 0.009
gi|169212744 PREDICTED: hypothetical protein [Homo sapiens] 37 0.009
>gi|169211438 PREDICTED: hypothetical protein [Homo sapiens]
Length = 200
Score = 422 bits (1086), Expect = e-119
Identities = 200/200 (100%), Positives = 200/200 (100%)
Query: 1 MGLGLPPQCAGSWRGEGSETRRELELGYRGTPRRPPPLPPGPQAWRGEQRRGRPLLGRAP 60
MGLGLPPQCAGSWRGEGSETRRELELGYRGTPRRPPPLPPGPQAWRGEQRRGRPLLGRAP
Sbjct: 1 MGLGLPPQCAGSWRGEGSETRRELELGYRGTPRRPPPLPPGPQAWRGEQRRGRPLLGRAP 60
Query: 61 RASVPAPRAFPNLVTLGGGCASRPSPSSALRVRAGWAGRGAIAGSPSLRPCDLGATEATR 120
RASVPAPRAFPNLVTLGGGCASRPSPSSALRVRAGWAGRGAIAGSPSLRPCDLGATEATR
Sbjct: 61 RASVPAPRAFPNLVTLGGGCASRPSPSSALRVRAGWAGRGAIAGSPSLRPCDLGATEATR 120
Query: 121 ARPRIGCHSQPPRAAPKPRACPGFPALRKVCALPCPGRGHGLGSLPPRGSGQCRVSVPRI 180
ARPRIGCHSQPPRAAPKPRACPGFPALRKVCALPCPGRGHGLGSLPPRGSGQCRVSVPRI
Sbjct: 121 ARPRIGCHSQPPRAAPKPRACPGFPALRKVCALPCPGRGHGLGSLPPRGSGQCRVSVPRI 180
Query: 181 RVLLLRSPALLRGTQQALMP 200
RVLLLRSPALLRGTQQALMP
Sbjct: 181 RVLLLRSPALLRGTQQALMP 200
>gi|169211910 PREDICTED: hypothetical protein [Homo sapiens]
Length = 200
Score = 422 bits (1086), Expect = e-119
Identities = 200/200 (100%), Positives = 200/200 (100%)
Query: 1 MGLGLPPQCAGSWRGEGSETRRELELGYRGTPRRPPPLPPGPQAWRGEQRRGRPLLGRAP 60
MGLGLPPQCAGSWRGEGSETRRELELGYRGTPRRPPPLPPGPQAWRGEQRRGRPLLGRAP
Sbjct: 1 MGLGLPPQCAGSWRGEGSETRRELELGYRGTPRRPPPLPPGPQAWRGEQRRGRPLLGRAP 60
Query: 61 RASVPAPRAFPNLVTLGGGCASRPSPSSALRVRAGWAGRGAIAGSPSLRPCDLGATEATR 120
RASVPAPRAFPNLVTLGGGCASRPSPSSALRVRAGWAGRGAIAGSPSLRPCDLGATEATR
Sbjct: 61 RASVPAPRAFPNLVTLGGGCASRPSPSSALRVRAGWAGRGAIAGSPSLRPCDLGATEATR 120
Query: 121 ARPRIGCHSQPPRAAPKPRACPGFPALRKVCALPCPGRGHGLGSLPPRGSGQCRVSVPRI 180
ARPRIGCHSQPPRAAPKPRACPGFPALRKVCALPCPGRGHGLGSLPPRGSGQCRVSVPRI
Sbjct: 121 ARPRIGCHSQPPRAAPKPRACPGFPALRKVCALPCPGRGHGLGSLPPRGSGQCRVSVPRI 180
Query: 181 RVLLLRSPALLRGTQQALMP 200
RVLLLRSPALLRGTQQALMP
Sbjct: 181 RVLLLRSPALLRGTQQALMP 200
>gi|169211055 PREDICTED: hypothetical protein [Homo sapiens]
Length = 200
Score = 422 bits (1086), Expect = e-119
Identities = 200/200 (100%), Positives = 200/200 (100%)
Query: 1 MGLGLPPQCAGSWRGEGSETRRELELGYRGTPRRPPPLPPGPQAWRGEQRRGRPLLGRAP 60
MGLGLPPQCAGSWRGEGSETRRELELGYRGTPRRPPPLPPGPQAWRGEQRRGRPLLGRAP
Sbjct: 1 MGLGLPPQCAGSWRGEGSETRRELELGYRGTPRRPPPLPPGPQAWRGEQRRGRPLLGRAP 60
Query: 61 RASVPAPRAFPNLVTLGGGCASRPSPSSALRVRAGWAGRGAIAGSPSLRPCDLGATEATR 120
RASVPAPRAFPNLVTLGGGCASRPSPSSALRVRAGWAGRGAIAGSPSLRPCDLGATEATR
Sbjct: 61 RASVPAPRAFPNLVTLGGGCASRPSPSSALRVRAGWAGRGAIAGSPSLRPCDLGATEATR 120
Query: 121 ARPRIGCHSQPPRAAPKPRACPGFPALRKVCALPCPGRGHGLGSLPPRGSGQCRVSVPRI 180
ARPRIGCHSQPPRAAPKPRACPGFPALRKVCALPCPGRGHGLGSLPPRGSGQCRVSVPRI
Sbjct: 121 ARPRIGCHSQPPRAAPKPRACPGFPALRKVCALPCPGRGHGLGSLPPRGSGQCRVSVPRI 180
Query: 181 RVLLLRSPALLRGTQQALMP 200
RVLLLRSPALLRGTQQALMP
Sbjct: 181 RVLLLRSPALLRGTQQALMP 200
>gi|239750966 PREDICTED: hypothetical protein XP_002347633 [Homo
sapiens]
Length = 261
Score = 53.9 bits (128), Expect = 9e-08
Identities = 57/167 (34%), Positives = 69/167 (41%), Gaps = 28/167 (16%)
Query: 15 GEGSETRRELELGYRGTPRRPPPLPPGPQAWRGE--QRRGRP--------LLGRAPRASV 64
G+G RR+ E G G PR+ + GP A R E GRP LL P
Sbjct: 101 GDGEHLRRDPEQGL-GPPRKAHGVQGGPCAARAEGGALHGRPGRDARPWRLLSACPSGR- 158
Query: 65 PAPRAFP---NLVTLGGGCASRPSPSSALRVRAGWAGRGAIAGSPSLRPCDLGATEATRA 121
P PR P L+ + P P SA R R G AGRG A +P T + RA
Sbjct: 159 PRPRPLPLPLMLMLMLPTLQPLPPPGSARRPRRGRAGRGGAAPAP--------PTGSMRA 210
Query: 122 RPRIGCHSQPPRAAPKPR-ACPGFPALRKVCALP---CPGRGHGLGS 164
P S P + P P ACPG P + + P PG G G G+
Sbjct: 211 GPGPSSPSAAPTSHPPPSPACPG-PEMETILRNPPARSPGAGWGSGA 256
>gi|239745372 PREDICTED: hypothetical protein XP_002343483 [Homo
sapiens]
Length = 261
Score = 53.9 bits (128), Expect = 9e-08
Identities = 57/167 (34%), Positives = 69/167 (41%), Gaps = 28/167 (16%)
Query: 15 GEGSETRRELELGYRGTPRRPPPLPPGPQAWRGE--QRRGRP--------LLGRAPRASV 64
G+G RR+ E G G PR+ + GP A R E GRP LL P
Sbjct: 101 GDGEHLRRDPEQGL-GPPRKAHGVQGGPCAARAEGGALHGRPGRDARPWRLLSACPSGR- 158
Query: 65 PAPRAFP---NLVTLGGGCASRPSPSSALRVRAGWAGRGAIAGSPSLRPCDLGATEATRA 121
P PR P L+ + P P SA R R G AGRG A +P T + RA
Sbjct: 159 PRPRPLPLPLMLMLMLPTLQPLPPPGSARRPRRGRAGRGGAAPAP--------PTGSMRA 210
Query: 122 RPRIGCHSQPPRAAPKPR-ACPGFPALRKVCALP---CPGRGHGLGS 164
P S P + P P ACPG P + + P PG G G G+
Sbjct: 211 GPGPSSPSAAPTSHPPPSPACPG-PEMETILRNPPARSPGAGWGSGA 256
>gi|239753114 PREDICTED: hypothetical protein [Homo sapiens]
Length = 322
Score = 47.4 bits (111), Expect = 8e-06
Identities = 52/178 (29%), Positives = 61/178 (34%), Gaps = 39/178 (21%)
Query: 1 MGLGLPPQCAGSWRGEGSETRRELELGYRGTPRRPPPLPPGPQAWRGEQRRGRPLLGRAP 60
+ LGLP QC +R PPP PP A Q R RP RAP
Sbjct: 163 LALGLPIQC------------------HRHISTEPPPPPPAAPATGSAQSRPRPAPARAP 204
Query: 61 RASVPAPRAFPNLVTLGGGCASRPSPSSALRVRAGWAGRGAIAGSPSLRPCDLGATEATR 120
+ A ++ P L LG A P L++RAG A G A SP
Sbjct: 205 LIAPGAHQSAPPLPVLGRLPAPLP-----LQLRAGGASTGLAAPSPG------------- 246
Query: 121 ARPRIGCHSQPPRAAPKPRACPGFPALRKVCALPCPGRGHGLGSLPPRGSGQCRVSVP 178
R G S+ P PRA LR C C G G P S + P
Sbjct: 247 ---RGGKQSEISFRGPGPRAQHPGCRLRAGCEPSCGRLGRGYQQRLPSRSPHAAPAAP 301
>gi|239752303 PREDICTED: hypothetical protein XP_002348193 [Homo
sapiens]
Length = 258
Score = 42.0 bits (97), Expect = 3e-04
Identities = 57/174 (32%), Positives = 66/174 (37%), Gaps = 33/174 (18%)
Query: 10 AGSWRGEGSETRRELELGYRGTPRRPPPLPPGPQAWRGEQRRGRPLLGRAPRASVPA--- 66
+ S RG G+ R E G +P P PP P G+Q+ P G A +P
Sbjct: 88 SSSSRGGGAPVARP-EPGRAASPGSMVPGPPAPPP-SGDQQPA-PSAGSGSTADLPEWPW 144
Query: 67 PRAFPNLVTLGGGCASRPSPSSALRVRAGWAGRGAIAGSPSLRPCDLGATEATRARPRIG 126
P L+ G GCA R RAG GR AGSPS P RPR
Sbjct: 145 PLQLLLLLAPGRGCA---------RGRAG-EGRAQCAGSPSTAP-----------RPRT- 182
Query: 127 CHSQPPRAAP-KPRACPGFPALRKVCALPCPGRGHGLGSLPPRGSGQCRVSVPR 179
C S P RA P +P P P C C G G LP S +PR
Sbjct: 183 C-SSPGRATPHRPAGQPSHPGGAGCCPRVC---GPAAGCLPLCASHPVLAHLPR 232
>gi|239746814 PREDICTED: hypothetical protein XP_002343855 [Homo
sapiens]
Length = 258
Score = 42.0 bits (97), Expect = 3e-04
Identities = 57/174 (32%), Positives = 66/174 (37%), Gaps = 33/174 (18%)
Query: 10 AGSWRGEGSETRRELELGYRGTPRRPPPLPPGPQAWRGEQRRGRPLLGRAPRASVPA--- 66
+ S RG G+ R E G +P P PP P G+Q+ P G A +P
Sbjct: 88 SSSSRGGGAPVARP-EPGRAASPGSMVPGPPAPPP-SGDQQPA-PSAGSGSTADLPEWPW 144
Query: 67 PRAFPNLVTLGGGCASRPSPSSALRVRAGWAGRGAIAGSPSLRPCDLGATEATRARPRIG 126
P L+ G GCA R RAG GR AGSPS P RPR
Sbjct: 145 PLQLLLLLAPGRGCA---------RGRAG-EGRAQCAGSPSTAP-----------RPRT- 182
Query: 127 CHSQPPRAAP-KPRACPGFPALRKVCALPCPGRGHGLGSLPPRGSGQCRVSVPR 179
C S P RA P +P P P C C G G LP S +PR
Sbjct: 183 C-SSPGRATPHRPAGQPSHPGGAGCCPRVC---GPAAGCLPLCASHPVLAHLPR 232
>gi|239754458 PREDICTED: hypothetical protein [Homo sapiens]
Length = 180
Score = 40.4 bits (93), Expect = 0.001
Identities = 47/160 (29%), Positives = 59/160 (36%), Gaps = 23/160 (14%)
Query: 2 GLGLPPQCAGSWRGEG-SETRRELEL--------GYRGTPRRPPPLPPGPQA----WRGE 48
G PP G GE S + R L G G RP P+ GP+A W +
Sbjct: 15 GSHFPPAARGRLPGETLSPSPRAAALPPLQQRPPGAPGALGRPKPVSRGPRAGLREWPQQ 74
Query: 49 QRR----GRPLLGRAPRASVPAPRAFPNLVTLGGGCASRPSPSSALRVRAGWAGRGAIAG 104
R G PL RAP A VP + P C+ RP ++ RV +
Sbjct: 75 PWRPGPLGAPLQDRAPSAHVPGSASRPTATPAPPRCSRRPPTTTVSRVAPSPGRPAGLHR 134
Query: 105 SPSLRPCDLGA-----TEATRARPRIGCHSQPPRAAPKPR 139
S RP D G T ARPR +P + +PR
Sbjct: 135 SREPRPQD-GTPPPVDTPPRTARPRPAFTPRPVVGSERPR 173
>gi|239749008 PREDICTED: hypothetical protein XP_002346879 [Homo
sapiens]
Length = 180
Score = 40.4 bits (93), Expect = 0.001
Identities = 47/160 (29%), Positives = 59/160 (36%), Gaps = 23/160 (14%)
Query: 2 GLGLPPQCAGSWRGEG-SETRRELEL--------GYRGTPRRPPPLPPGPQA----WRGE 48
G PP G GE S + R L G G RP P+ GP+A W +
Sbjct: 15 GSHFPPAARGRLPGETLSPSPRAAALPPLQQRPPGAPGALGRPKPVSRGPRAGLREWPQQ 74
Query: 49 QRR----GRPLLGRAPRASVPAPRAFPNLVTLGGGCASRPSPSSALRVRAGWAGRGAIAG 104
R G PL RAP A VP + P C+ RP ++ RV +
Sbjct: 75 PWRPGPLGAPLQDRAPSAHVPGSASRPTATPAPPRCSRRPPTTTVSRVAPSPGRPAGLHR 134
Query: 105 SPSLRPCDLGA-----TEATRARPRIGCHSQPPRAAPKPR 139
S RP D G T ARPR +P + +PR
Sbjct: 135 SREPRPQD-GTPPPVDTPPRTARPRPAFTPRPVVGSERPR 173
>gi|239743028 PREDICTED: hypothetical protein XP_002342721 [Homo
sapiens]
Length = 180
Score = 40.4 bits (93), Expect = 0.001
Identities = 47/160 (29%), Positives = 59/160 (36%), Gaps = 23/160 (14%)
Query: 2 GLGLPPQCAGSWRGEG-SETRRELEL--------GYRGTPRRPPPLPPGPQA----WRGE 48
G PP G GE S + R L G G RP P+ GP+A W +
Sbjct: 15 GSHFPPAARGRLPGETLSPSPRAAALPPLQQRPPGAPGALGRPKPVSRGPRAGLREWPQQ 74
Query: 49 QRR----GRPLLGRAPRASVPAPRAFPNLVTLGGGCASRPSPSSALRVRAGWAGRGAIAG 104
R G PL RAP A VP + P C+ RP ++ RV +
Sbjct: 75 PWRPGPLGAPLQDRAPSAHVPGSASRPTATPAPPRCSRRPPTTTVSRVAPSPGRPAGLHR 134
Query: 105 SPSLRPCDLGA-----TEATRARPRIGCHSQPPRAAPKPR 139
S RP D G T ARPR +P + +PR
Sbjct: 135 SREPRPQD-GTPPPVDTPPRTARPRPAFTPRPVVGSERPR 173
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 40.4 bits (93), Expect = 0.001
Identities = 48/173 (27%), Positives = 62/173 (35%), Gaps = 39/173 (22%)
Query: 32 PRRPPPLPPGPQAWRGEQRRGRPL------------------LGRAPRASVPAPRAFPNL 73
P++PPP P P +Q++ P +G AP AS AP A P
Sbjct: 79 PQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPT 138
Query: 74 VTLGGGCASRPSPSSALRVRAGWAGRGAIAGSPSLRPCDLGATEATRARPRIGCHSQPPR 133
G P+P+ V + A G+P P G P+ G PP
Sbjct: 139 SGAPPGSGPGPTPTPPPAVTS------APPGAPPPTPPSSGVPTTP---PQAGGPPPPPA 189
Query: 134 AAPKPRACP------GFPALRKVCALPCPGRGHGLGS------LPPRGSGQCR 174
A P P P G P K+ P PG G GL + P RG G+ R
Sbjct: 190 AVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGGGEPR 242
>gi|21265034 ADAM metallopeptidase with thrombospondin type 1 motif,
13 isoform 1 preproprotein [Homo sapiens]
Length = 1427
Score = 40.0 bits (92), Expect = 0.001
Identities = 45/144 (31%), Positives = 57/144 (39%), Gaps = 26/144 (18%)
Query: 47 GEQRRGRPLLGRAPRASVPAPRAFPNLVTLGGGCASRPSPSSALRVRAGWAGRGAIAGSP 106
G QRR LG P+A P P F C P P + VR WAG G+P
Sbjct: 1091 GIQRRRDTCLG--PQAQAPVPADF---------CQHLPKP---VTVRGCWAGPCVGQGTP 1136
Query: 107 SLRPCDLGATEATRARPRIGCHSQPPRA-------APKPRACPGFPALRKVCALPCPGRG 159
SL P + A G + +A AP+PR P V + C GR
Sbjct: 1137 SLVPHEEAAAPGRTTATPAGASLEWSQARGLLFSPAPQPRRLLPGPQENSVQSSAC-GRQ 1195
Query: 160 H--GLGSLPPRGSGQ--CRVSVPR 179
H G++ RG GQ C V++ R
Sbjct: 1196 HLEPTGTIDMRGPGQADCAVAIGR 1219
Score = 28.5 bits (62), Expect = 4.0
Identities = 26/72 (36%), Positives = 28/72 (38%), Gaps = 13/72 (18%)
Query: 77 GGGCASRPSPSSALRVRAGWAGRGAIAGSPSLRPCDLGATEATRARPRIGCHSQPPRAAP 136
G GC PS + G A R +A SP R L A RAR C PPR P
Sbjct: 239 GSGCG----PSGHVMASDGAAPRAGLAWSPCSRRQLLSLLSAGRAR----CVWDPPRPQP 290
Query: 137 -----KPRACPG 143
P A PG
Sbjct: 291 GSAGHPPDAQPG 302
>gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 40.0 bits (92), Expect = 0.001
Identities = 50/153 (32%), Positives = 58/153 (37%), Gaps = 14/153 (9%)
Query: 13 WRGEGSETRRELELGYRGTPRRPPPLPPGPQAWRGEQRRGR---PLLGRAPRASVPAPRA 69
W G G RR + RG RP P WR RR P GRA R S A A
Sbjct: 114 WEGGGLGARRAVTAARRGGASRPLAGEP----WREAARRRPQQCPQWGRA-RESRSAALA 168
Query: 70 FPNLVTLGGGCASRPSPSSALRVRAG---WAGRGAIAGSPSLRPC-DLGATEATRARPRI 125
P + ASR A ++G G GA A P + PC G + R+R
Sbjct: 169 SPRVSNAPTTPASRNPGLRAQERQSGRRAAGGGGARAEPPRVPPCRPAGCSGGNRSRRAA 228
Query: 126 GCHSQPPRAAPKPRACPGFPA--LRKVCALPCP 156
G + R P PR PA LR V L P
Sbjct: 229 GAGPRTTRRKPPPRPPGTAPAAGLRSVHLLRIP 261
Score = 33.1 bits (74), Expect = 0.16
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 7 PQCAGSWRGEGSETRRELELGYRGTPRRPPPLPPG 41
P C + G+ +RR G R T R+PPP PPG
Sbjct: 211 PPCRPAGCSGGNRSRRAAGAGPRTTRRKPPPRPPG 245
>gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 350
Score = 39.7 bits (91), Expect = 0.002
Identities = 47/154 (30%), Positives = 55/154 (35%), Gaps = 23/154 (14%)
Query: 29 RGTPRRPPPLPPGPQAWRGEQRRGRPLLGRAPRASVPAPRAFPNLVTLGGGCASRPSPSS 88
R P P L P A G R L G RA+ A G RP PS
Sbjct: 71 RAAPAAAPRLLPRVLA--GAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSP 128
Query: 89 ALRVRAGWAGRGAIAGSPSLRPCDLGATEATRARPRIGCHSQP-------------PRAA 135
L+ R+ P P RA+ R GC S P PR
Sbjct: 129 PLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGD 188
Query: 136 PKPRA-CPG-----FPALRKVCAL--PCPGRGHG 161
P+PRA PG PALR+ +L P PGR +G
Sbjct: 189 PRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNG 222
Score = 29.3 bits (64), Expect = 2.3
Identities = 24/80 (30%), Positives = 30/80 (37%), Gaps = 12/80 (15%)
Query: 35 PPPLPPGPQAWR-GEQRRGRPLLGRAPRASVPAPRAFPNLVTLGGGCASRPSP------- 86
PP P P+A R G+ R P L P S P+P G G +P P
Sbjct: 184 PPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQPPPPPCAT 243
Query: 87 ----SSALRVRAGWAGRGAI 102
ALR R + RG +
Sbjct: 244 RREEDMALRTRDRTSSRGTV 263
>gi|239752764 PREDICTED: hypothetical protein [Homo sapiens]
Length = 370
Score = 39.3 bits (90), Expect = 0.002
Identities = 44/121 (36%), Positives = 49/121 (40%), Gaps = 5/121 (4%)
Query: 4 GLPPQCAGSWRGEGSETRRELELGYRGTPRRPPPLPPGPQAWRGEQRRGRPLLGRAPRAS 63
GLP A R + + TR L L PR PP P WR R RPLL + P
Sbjct: 142 GLPASEAPGLRPDSARTRLRLRLASARLPRGLPP-APAAGLWRAGCTRLRPLLLQPPPML 200
Query: 64 VPAPRAFPNLVTLGGGCASRPSPSSA--LRVRAGWAGRGAIAGSPSLRPCDLGATEA-TR 120
P P V L S P+PS A L A A R A SP+ L EA TR
Sbjct: 201 SPGLAQSPG-VELHARTLSLPAPSPAPCLPPPAPPAARTPSAHSPAHTHFTLTLAEAHTR 259
Query: 121 A 121
A
Sbjct: 260 A 260
Score = 29.6 bits (65), Expect = 1.8
Identities = 40/153 (26%), Positives = 52/153 (33%), Gaps = 26/153 (16%)
Query: 49 QRRGRPLLGRAPRASVPAPRAFPNLVTLGGGC--------ASRPSPSSALRVRAGWAGRG 100
+R+G ++GR P LG G A P + L+V R
Sbjct: 64 RRQGAVIVGRRRACPGRGRGGLPGAAALGAGAQQPRRRRLAQPPGSRAPLQVGGAPRRRA 123
Query: 101 AIAGSPSLRPCDLGATEATRARPRIGC-HSQPPRAAPKPRACPGFPALRKVCALPCPGRG 159
+ G P R PR+ H P AP R LR A RG
Sbjct: 124 HLTGGPP-----------RRRPPRLAAAHGLPASEAPGLRPDSARTRLRLRLASARLPRG 172
Query: 160 HGLGSLPPR-GSGQCRVSVPRIRVLLLRSPALL 191
LPP +G R R+R LLL+ P +L
Sbjct: 173 -----LPPAPAAGLWRAGCTRLRPLLLQPPPML 200
>gi|239748415 PREDICTED: hypothetical protein [Homo sapiens]
Length = 208
Score = 39.3 bits (90), Expect = 0.002
Identities = 58/198 (29%), Positives = 72/198 (36%), Gaps = 43/198 (21%)
Query: 2 GLGLPPQCAGS----WRGEGSETRREL----ELGYRGTPRRPPPLPPGPQAWRGEQRRGR 53
G PP C R + + RR +L R +R PP R G
Sbjct: 23 GTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPA----------DREGE 72
Query: 54 PLLGRAPRASVPAPRAFPNLVTLGGGCASRPSPSSALRVRAGWAG-RGAIAGSPSLRPCD 112
+ R R S P P+ P L+T G A + SPS RV A AG R +A LRP
Sbjct: 73 REVLRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLAKGVPLRP-- 130
Query: 113 LGATEATRARPRIGCHSQPPRAAPKPRACPGFPALRKVCALPCPGRGHGLGSLPPRGSGQ 172
++PP A P P P K LPC G G +P Q
Sbjct: 131 ---------------GAEPPAPASDPDLEPTPPGGLKSPPLPC-ASGQG---VPGTRRRQ 171
Query: 173 CRVSVPRIRVLLLRSPAL 190
++ V LLLR P L
Sbjct: 172 NKLGV---ETLLLRRPQL 186
Score = 28.9 bits (63), Expect = 3.0
Identities = 19/57 (33%), Positives = 24/57 (42%)
Query: 2 GLGLPPQCAGSWRGEGSETRRELELGYRGTPRRPPPLPPGPQAWRGEQRRGRPLLGR 58
GL PP S +G RR+ +LG R P LPP + + G L GR
Sbjct: 150 GLKSPPLPCASGQGVPGTRRRQNKLGVETLLLRRPQLPPHSETFLPVLDSGTALTGR 206
>gi|239742343 PREDICTED: hypothetical protein XP_002342497 [Homo
sapiens]
Length = 208
Score = 39.3 bits (90), Expect = 0.002
Identities = 58/198 (29%), Positives = 72/198 (36%), Gaps = 43/198 (21%)
Query: 2 GLGLPPQCAGS----WRGEGSETRREL----ELGYRGTPRRPPPLPPGPQAWRGEQRRGR 53
G PP C R + + RR +L R +R PP R G
Sbjct: 23 GTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPA----------DREGE 72
Query: 54 PLLGRAPRASVPAPRAFPNLVTLGGGCASRPSPSSALRVRAGWAG-RGAIAGSPSLRPCD 112
+ R R S P P+ P L+T G A + SPS RV A AG R +A LRP
Sbjct: 73 REVLRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLAKGVPLRP-- 130
Query: 113 LGATEATRARPRIGCHSQPPRAAPKPRACPGFPALRKVCALPCPGRGHGLGSLPPRGSGQ 172
++PP A P P P K LPC G G +P Q
Sbjct: 131 ---------------GAEPPAPASDPDLEPTPPGGLKSPPLPC-ASGQG---VPGTRRRQ 171
Query: 173 CRVSVPRIRVLLLRSPAL 190
++ V LLLR P L
Sbjct: 172 NKLGV---ETLLLRRPQL 186
Score = 28.9 bits (63), Expect = 3.0
Identities = 19/57 (33%), Positives = 24/57 (42%)
Query: 2 GLGLPPQCAGSWRGEGSETRRELELGYRGTPRRPPPLPPGPQAWRGEQRRGRPLLGR 58
GL PP S +G RR+ +LG R P LPP + + G L GR
Sbjct: 150 GLKSPPLPCASGQGVPGTRRRQNKLGVETLLLRRPQLPPHSETFLPVLDSGTALTGR 206
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 39.3 bits (90), Expect = 0.002
Identities = 44/145 (30%), Positives = 58/145 (40%), Gaps = 30/145 (20%)
Query: 33 RRPPPLPPGPQAWRGEQRRGRPLLGRAPRASVPAPRAFPNLVTLGGGCAS-----RPSPS 87
+RPPP PQ G QR+G PL R P P+ +L LG S PSP+
Sbjct: 459 QRPPPQGGPPQPGPGPQRQGPPLQQR------PPPQGQQHLSGLGPPAGSPLPQRLPSPT 512
Query: 88 SALRVRAGWAGRGAIAGSPSLRPCDLGATEATRARPRIGCHSQPPRAAPKPRACPGFPAL 147
SA + A A P G + ++RP G PP A P P P+
Sbjct: 513 SAPQQPASQAA-----------PPTQG--QGRQSRPVAGGPGAPPAARP-----PASPSP 554
Query: 148 RKVCALPCPGRGHGL-GSLPPRGSG 171
++ P R + G PP+ SG
Sbjct: 555 QRQAGPPQATRQTSVSGPAPPKASG 579
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 39.3 bits (90), Expect = 0.002
Identities = 44/145 (30%), Positives = 58/145 (40%), Gaps = 30/145 (20%)
Query: 33 RRPPPLPPGPQAWRGEQRRGRPLLGRAPRASVPAPRAFPNLVTLGGGCAS-----RPSPS 87
+RPPP PQ G QR+G PL R P P+ +L LG S PSP+
Sbjct: 459 QRPPPQGGPPQPGPGPQRQGPPLQQR------PPPQGQQHLSGLGPPAGSPLPQRLPSPT 512
Query: 88 SALRVRAGWAGRGAIAGSPSLRPCDLGATEATRARPRIGCHSQPPRAAPKPRACPGFPAL 147
SA + A A P G + ++RP G PP A P P P+
Sbjct: 513 SAPQQPASQAA-----------PPTQG--QGRQSRPVAGGPGAPPAARP-----PASPSP 554
Query: 148 RKVCALPCPGRGHGL-GSLPPRGSG 171
++ P R + G PP+ SG
Sbjct: 555 QRQAGPPQATRQTSVSGPAPPKASG 579
>gi|239741003 PREDICTED: hypothetical protein LOC643965 [Homo
sapiens]
Length = 487
Score = 38.9 bits (89), Expect = 0.003
Identities = 55/161 (34%), Positives = 63/161 (39%), Gaps = 27/161 (16%)
Query: 9 CAG-SWRGEGSETRRELELGYRGTPRRPPPLPPGPQ----------AWRGEQRR-GRPLL 56
C+G S +G ET E E G G P LP GP W G GR L
Sbjct: 320 CSGRSMSEQGRET--EEEEGGGGASDTAPMLPRGPPDHQASALTCPGWSGPPLLPGRLLA 377
Query: 57 GRAPRASVPAPRAFPNL------VTLGGGCASRPSPSSALRVRAGWAGRGAIA----GSP 106
G +PA L V LG C SR P+ R RA ++ RG+ A G
Sbjct: 378 GLLLHLLLPAAAFLLVLLPAAAVVYLGFLCHSRVHPAPGPRCRALFSDRGSAALIVFGLL 437
Query: 107 SLRPCDLGATEATRAR--PRIGCHSQPPRAAPKPRACPGFP 145
SL P L A RAR R+ PP P PR PG P
Sbjct: 438 SLPPL-LVLASAVRARLARRLRPLLPPPAGTPGPRRPPGRP 477
>gi|169207782 PREDICTED: hypothetical protein [Homo sapiens]
Length = 330
Score = 38.5 bits (88), Expect = 0.004
Identities = 47/146 (32%), Positives = 51/146 (34%), Gaps = 26/146 (17%)
Query: 30 GTPRRP-PPLPPGPQAWRGEQRRGRPLLGRAPRASVPAPRAFPNLVTLGGGCASRPSPSS 88
G R P P LPPGP R L R RAS P GC PSP
Sbjct: 94 GGSRGPHPTLPPGPAGSLVFPERRGSLQDRLGRASRP-------------GCP--PSPRG 138
Query: 89 ALRVR-AGWAGRGAIAGSPSLRPCDLGATEATRARPRIGCHSQPP--RAAPKPRACPGFP 145
+ + R A GR G T R RPR G P R P P A P
Sbjct: 139 SRQERGANSPGRSGARGCGGAAALQQEPTN-FRGRPRPGARGTDPPGRTLPAPLARPSTQ 197
Query: 146 ALRKVCALPCPGRGHGLGSLPPRGSG 171
R+ PG G L PRG+G
Sbjct: 198 PGRR------PGLGRAASPLGPRGAG 217
>gi|169207076 PREDICTED: hypothetical protein [Homo sapiens]
Length = 330
Score = 38.5 bits (88), Expect = 0.004
Identities = 47/146 (32%), Positives = 51/146 (34%), Gaps = 26/146 (17%)
Query: 30 GTPRRP-PPLPPGPQAWRGEQRRGRPLLGRAPRASVPAPRAFPNLVTLGGGCASRPSPSS 88
G R P P LPPGP R L R RAS P GC PSP
Sbjct: 94 GGSRGPHPTLPPGPAGSLVFPERRGSLQDRLGRASRP-------------GCP--PSPRG 138
Query: 89 ALRVR-AGWAGRGAIAGSPSLRPCDLGATEATRARPRIGCHSQPP--RAAPKPRACPGFP 145
+ + R A GR G T R RPR G P R P P A P
Sbjct: 139 SRQERGANSPGRSGARGCGGAAALQQEPTN-FRGRPRPGARGTDPPGRTLPAPLARPSTQ 197
Query: 146 ALRKVCALPCPGRGHGLGSLPPRGSG 171
R+ PG G L PRG+G
Sbjct: 198 PGRR------PGLGRAASPLGPRGAG 217
>gi|27477095 nuclear receptor binding SET domain protein 1 isoform a
[Homo sapiens]
Length = 2427
Score = 38.1 bits (87), Expect = 0.005
Identities = 45/165 (27%), Positives = 64/165 (38%), Gaps = 29/165 (17%)
Query: 35 PPPLPPGPQAWRGEQRRGRPLLGRAPRASVPAPRAFPNLVT-----LGGGCA-------- 81
P PLPPGP EQ G + +AP+ S P +++ L G C
Sbjct: 1956 PVPLPPGPSTHLAEQSTG--MAAQAPKMSDKPPADTNQMLSLSKKALAGTCQRPLLPERP 2013
Query: 82 -----SRPSPSSALRVRAGWAGRGAIAGSPSLRPCDLGATEATRARPRIGCHSQP---PR 133
SRP P +R AG +G + + S RP D A RP++ P P
Sbjct: 2014 LERTDSRPQPLDKVRDLAG-SGTKSQSLVSSQRPLDRPPAVA-GPRPQLSDKPSPVTSPS 2071
Query: 134 AAPKPRACPGFPALRKVCALPCPGRGHGLGSLPPRGSGQCRVSVP 178
++P R+ P L + P +G+ PR + SVP
Sbjct: 2072 SSPSVRSQP----LERPLGTADPRLDKSIGAASPRPQSLEKTSVP 2112
>gi|19923586 nuclear receptor binding SET domain protein 1 isoform b
[Homo sapiens]
Length = 2696
Score = 38.1 bits (87), Expect = 0.005
Identities = 45/165 (27%), Positives = 64/165 (38%), Gaps = 29/165 (17%)
Query: 35 PPPLPPGPQAWRGEQRRGRPLLGRAPRASVPAPRAFPNLVT-----LGGGCA-------- 81
P PLPPGP EQ G + +AP+ S P +++ L G C
Sbjct: 2225 PVPLPPGPSTHLAEQSTG--MAAQAPKMSDKPPADTNQMLSLSKKALAGTCQRPLLPERP 2282
Query: 82 -----SRPSPSSALRVRAGWAGRGAIAGSPSLRPCDLGATEATRARPRIGCHSQP---PR 133
SRP P +R AG +G + + S RP D A RP++ P P
Sbjct: 2283 LERTDSRPQPLDKVRDLAG-SGTKSQSLVSSQRPLDRPPAVA-GPRPQLSDKPSPVTSPS 2340
Query: 134 AAPKPRACPGFPALRKVCALPCPGRGHGLGSLPPRGSGQCRVSVP 178
++P R+ P L + P +G+ PR + SVP
Sbjct: 2341 SSPSVRSQP----LERPLGTADPRLDKSIGAASPRPQSLEKTSVP 2381
>gi|226442744 hypothetical protein LOC643965 [Homo sapiens]
Length = 163
Score = 37.4 bits (85), Expect = 0.009
Identities = 52/153 (33%), Positives = 59/153 (38%), Gaps = 26/153 (16%)
Query: 16 EGSETRRELELGYRGTPRRPPPLPPGPQ----------AWRGEQRR-GRPLLGRAPRASV 64
+G ET E E G G P LP GP W G GR L G +
Sbjct: 4 QGRET--EEEEGGGGASDTAPMLPRGPPDHQASALTCPGWSGPPLLPGRLLAGLLLHLLL 61
Query: 65 PAPRAFPNL------VTLGGGCASRPSPSSALRVRAGWAGRGAIA----GSPSLRPCDLG 114
PA L V LG C SR P+ R RA ++ RG+ A G SL P L
Sbjct: 62 PAAAFLLVLLPAAAVVYLGFLCHSRVHPAPGPRCRALFSDRGSAALIVFGLLSLPPL-LV 120
Query: 115 ATEATRAR--PRIGCHSQPPRAAPKPRACPGFP 145
A RAR R+ PP P PR PG P
Sbjct: 121 LASAVRARLARRLRPLLPPPAGTPGPRRPPGRP 153
>gi|239753856 PREDICTED: hypothetical protein [Homo sapiens]
Length = 208
Score = 37.4 bits (85), Expect = 0.009
Identities = 57/198 (28%), Positives = 71/198 (35%), Gaps = 43/198 (21%)
Query: 2 GLGLPPQCAGS----WRGEGSETRREL----ELGYRGTPRRPPPLPPGPQAWRGEQRRGR 53
G PP C R + + RR +L R +R PP R G
Sbjct: 23 GTAPPPSCGRGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPA----------DREGE 72
Query: 54 PLLGRAPRASVPAPRAFPNLVTLGGGCASRPSPSSALRVRAGWAG-RGAIAGSPSLRPCD 112
+ R R S P P+ P L+T G A + SPS RV A AG R + LRP
Sbjct: 73 REVLRGQRESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLPKGVPLRP-- 130
Query: 113 LGATEATRARPRIGCHSQPPRAAPKPRACPGFPALRKVCALPCPGRGHGLGSLPPRGSGQ 172
++PP A P P P K LPC G G +P Q
Sbjct: 131 ---------------GAEPPAPASDPDLEPTPPGGLKSPPLPC-ASGQG---VPGTRRRQ 171
Query: 173 CRVSVPRIRVLLLRSPAL 190
++ V LLLR P L
Sbjct: 172 NKLGV---ETLLLRRPQL 186
Score = 28.9 bits (63), Expect = 3.0
Identities = 19/57 (33%), Positives = 24/57 (42%)
Query: 2 GLGLPPQCAGSWRGEGSETRRELELGYRGTPRRPPPLPPGPQAWRGEQRRGRPLLGR 58
GL PP S +G RR+ +LG R P LPP + + G L GR
Sbjct: 150 GLKSPPLPCASGQGVPGTRRRQNKLGVETLLLRRPQLPPHSETFLPVLDSGTALTGR 206
>gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 37.4 bits (85), Expect = 0.009
Identities = 48/162 (29%), Positives = 56/162 (34%), Gaps = 18/162 (11%)
Query: 10 AGS--WRGEGSETRRELELGYRGTP----RRPPPLPPGPQAWRGEQRRGRPLLGRAPRAS 63
AGS WR R + G G+P PPP PP P G R RP G P A
Sbjct: 40 AGSKLWR----RPRGAVSAGAPGSPLYRVSAPPPAPPPPPPPGGPSRSERPRAGLRPGAF 95
Query: 64 V-PAPRAFPNLVTLGGGCASRPSPSSALRVRAGWAGRGAIAGSPSLRPCDLGATEATRAR 122
V P P + G A R S+A A G P+LR G RA
Sbjct: 96 VSPGPLGRRASCSGRAGSAGRLRCSAAALSAAQRGGPARAQVPPALRTFSPGPASPPRAS 155
Query: 123 PRIGCHSQPPRAAPKPRACPGFPALRKVCALPCPGRGHGLGS 164
P R + R G R+V P G+GS
Sbjct: 156 P-------GGRPGSEARGRSGAECARRVPLHHGPPGASGVGS 190
>gi|169210481 PREDICTED: hypothetical protein [Homo sapiens]
Length = 143
Score = 37.4 bits (85), Expect = 0.009
Identities = 28/78 (35%), Positives = 32/78 (41%), Gaps = 17/78 (21%)
Query: 80 CASRPSPSSALRVRAG---W--AGRGAIAGSPSLRPCDLGATEATRARPRIGC------- 127
C RP+P A R R G W AG GA+ G PC A A + P C
Sbjct: 2 CPPRPAPRRASRARRGLAPWDGAGAGAVTG-----PCPAAAQGARGSWPSPRCLPSDGGA 56
Query: 128 HSQPPRAAPKPRACPGFP 145
PP +AP PR G P
Sbjct: 57 REAPPTSAPHPRRPAGSP 74
>gi|169212744 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 37.4 bits (85), Expect = 0.009
Identities = 48/162 (29%), Positives = 56/162 (34%), Gaps = 18/162 (11%)
Query: 10 AGS--WRGEGSETRRELELGYRGTP----RRPPPLPPGPQAWRGEQRRGRPLLGRAPRAS 63
AGS WR R + G G+P PPP PP P G R RP G P A
Sbjct: 40 AGSKLWR----RPRGAVSAGAPGSPLYRVSAPPPAPPPPPPPGGPSRSERPRAGLRPGAF 95
Query: 64 V-PAPRAFPNLVTLGGGCASRPSPSSALRVRAGWAGRGAIAGSPSLRPCDLGATEATRAR 122
V P P + G A R S+A A G P+LR G RA
Sbjct: 96 VSPGPLGRRASCSGRAGSAGRLRCSAAALSAAQRGGPARAQVPPALRTFSPGPASPPRAS 155
Query: 123 PRIGCHSQPPRAAPKPRACPGFPALRKVCALPCPGRGHGLGS 164
P R + R G R+V P G+GS
Sbjct: 156 P-------GGRPGSEARGRSGAECARRVPLHHGPPGASGVGS 190
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.140 0.467
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,777,136
Number of Sequences: 37866
Number of extensions: 846839
Number of successful extensions: 5773
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 648
Number of HSP's that attempted gapping in prelim test: 4891
Number of HSP's gapped (non-prelim): 1441
length of query: 200
length of database: 18,247,518
effective HSP length: 97
effective length of query: 103
effective length of database: 14,574,516
effective search space: 1501175148
effective search space used: 1501175148
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.