Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 169211191
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169211191 PREDICTED: similar to hCG1816473 [Homo sapiens]
(256 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169211191 PREDICTED: similar to hCG1816473 [Homo sapiens] 559 e-159
gi|169211572 PREDICTED: similar to hCG1816473 [Homo sapiens] 557 e-159
gi|169212006 PREDICTED: similar to hCG1816473 [Homo sapiens] 553 e-158
gi|32483397 dopamine receptor D4 [Homo sapiens] 40 0.003
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac... 39 0.004
gi|90403598 mesoderm posterior 2 homolog [Homo sapiens] 38 0.010
gi|19263349 Cbp/p300-interacting transactivator, with Glu/Asp-ri... 37 0.022
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 36 0.029
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 36 0.029
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 36 0.029
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 36 0.029
gi|10047144 sal-like 4 [Homo sapiens] 35 0.064
gi|57165355 latrophilin 1 isoform 1 precursor [Homo sapiens] 35 0.064
gi|41281557 latrophilin 1 isoform 2 precursor [Homo sapiens] 35 0.064
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 35 0.064
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 35 0.064
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 35 0.064
gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo s... 35 0.083
gi|75677594 forkhead box D4 [Homo sapiens] 35 0.083
gi|52630419 sterol regulatory element binding transcription fact... 34 0.14
gi|22547195 sterol regulatory element binding transcription fact... 34 0.14
gi|239752663 PREDICTED: similar to HSPC088 [Homo sapiens] 34 0.14
gi|154355000 KH-type splicing regulatory protein [Homo sapiens] 34 0.14
gi|18959276 forkhead box D4-like 1 [Homo sapiens] 34 0.14
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] 34 0.14
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens] 34 0.14
gi|163965366 nascent polypeptide-associated complex alpha subuni... 34 0.14
gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo... 33 0.19
gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo... 33 0.19
gi|239742065 PREDICTED: hypothetical protein XP_002342402 [Homo ... 33 0.19
>gi|169211191 PREDICTED: similar to hCG1816473 [Homo sapiens]
Length = 256
Score = 559 bits (1440), Expect = e-159
Identities = 256/256 (100%), Positives = 256/256 (100%)
Query: 1 MGAGVGSSVAWDTSYPAIRRPGLAQQLHPPLLFTHDTSLPTRHCWLTCDTPGSSDARQVL 60
MGAGVGSSVAWDTSYPAIRRPGLAQQLHPPLLFTHDTSLPTRHCWLTCDTPGSSDARQVL
Sbjct: 1 MGAGVGSSVAWDTSYPAIRRPGLAQQLHPPLLFTHDTSLPTRHCWLTCDTPGSSDARQVL 60
Query: 61 LVRGRQELVLSGTRALLGAGGTWDLNHAGSWPVVQAVPGRCGRAPQAPGGPPLPSCHPSW 120
LVRGRQELVLSGTRALLGAGGTWDLNHAGSWPVVQAVPGRCGRAPQAPGGPPLPSCHPSW
Sbjct: 61 LVRGRQELVLSGTRALLGAGGTWDLNHAGSWPVVQAVPGRCGRAPQAPGGPPLPSCHPSW 120
Query: 121 ESPGQGGLEACPTCAQGSLWLPSAGLCSLPACFPSSSWALPQHPPEPLPFLAPAWPGIPE 180
ESPGQGGLEACPTCAQGSLWLPSAGLCSLPACFPSSSWALPQHPPEPLPFLAPAWPGIPE
Sbjct: 121 ESPGQGGLEACPTCAQGSLWLPSAGLCSLPACFPSSSWALPQHPPEPLPFLAPAWPGIPE 180
Query: 181 DAFTSPAPCLVDHHSCLLLLCPLPRAWETWEDPEGGSGMCDTSRRLTSSLAGSTLHREPA 240
DAFTSPAPCLVDHHSCLLLLCPLPRAWETWEDPEGGSGMCDTSRRLTSSLAGSTLHREPA
Sbjct: 181 DAFTSPAPCLVDHHSCLLLLCPLPRAWETWEDPEGGSGMCDTSRRLTSSLAGSTLHREPA 240
Query: 241 AMLPLSCPCGAAERDA 256
AMLPLSCPCGAAERDA
Sbjct: 241 AMLPLSCPCGAAERDA 256
>gi|169211572 PREDICTED: similar to hCG1816473 [Homo sapiens]
Length = 256
Score = 557 bits (1435), Expect = e-159
Identities = 255/256 (99%), Positives = 255/256 (99%)
Query: 1 MGAGVGSSVAWDTSYPAIRRPGLAQQLHPPLLFTHDTSLPTRHCWLTCDTPGSSDARQVL 60
MGAGVGSSVAWDTSYPAIRRPGLAQQLHPPLLFTHDTSLPTRHCWLTCDTPGSSDARQVL
Sbjct: 1 MGAGVGSSVAWDTSYPAIRRPGLAQQLHPPLLFTHDTSLPTRHCWLTCDTPGSSDARQVL 60
Query: 61 LVRGRQELVLSGTRALLGAGGTWDLNHAGSWPVVQAVPGRCGRAPQAPGGPPLPSCHPSW 120
LVRGRQELVLSGTRALLGAGGTWDLNHAGSWPVVQAVPGRCGRAPQAPGGPPLPSCHPSW
Sbjct: 61 LVRGRQELVLSGTRALLGAGGTWDLNHAGSWPVVQAVPGRCGRAPQAPGGPPLPSCHPSW 120
Query: 121 ESPGQGGLEACPTCAQGSLWLPSAGLCSLPACFPSSSWALPQHPPEPLPFLAPAWPGIPE 180
ESPGQGGLEACPTCAQGSLWLPSAGLCSLPACFPSSSWALPQHPPEPLPFLAPAWPGIPE
Sbjct: 121 ESPGQGGLEACPTCAQGSLWLPSAGLCSLPACFPSSSWALPQHPPEPLPFLAPAWPGIPE 180
Query: 181 DAFTSPAPCLVDHHSCLLLLCPLPRAWETWEDPEGGSGMCDTSRRLTSSLAGSTLHREPA 240
DAF SPAPCLVDHHSCLLLLCPLPRAWETWEDPEGGSGMCDTSRRLTSSLAGSTLHREPA
Sbjct: 181 DAFASPAPCLVDHHSCLLLLCPLPRAWETWEDPEGGSGMCDTSRRLTSSLAGSTLHREPA 240
Query: 241 AMLPLSCPCGAAERDA 256
AMLPLSCPCGAAERDA
Sbjct: 241 AMLPLSCPCGAAERDA 256
>gi|169212006 PREDICTED: similar to hCG1816473 [Homo sapiens]
Length = 256
Score = 553 bits (1425), Expect = e-158
Identities = 254/256 (99%), Positives = 254/256 (99%)
Query: 1 MGAGVGSSVAWDTSYPAIRRPGLAQQLHPPLLFTHDTSLPTRHCWLTCDTPGSSDARQVL 60
MGAGVGSSVAWDTSYPAIRRPGLAQQLHPPLLFTHDTSLPTRHCWLTCDTPGSSDARQVL
Sbjct: 1 MGAGVGSSVAWDTSYPAIRRPGLAQQLHPPLLFTHDTSLPTRHCWLTCDTPGSSDARQVL 60
Query: 61 LVRGRQELVLSGTRALLGAGGTWDLNHAGSWPVVQAVPGRCGRAPQAPGGPPLPSCHPSW 120
LVRGRQELVLSGTRALLGAGGTWDLNHAGSWPVVQAVPGRCGRA QAPGGPPLPSCHPSW
Sbjct: 61 LVRGRQELVLSGTRALLGAGGTWDLNHAGSWPVVQAVPGRCGRALQAPGGPPLPSCHPSW 120
Query: 121 ESPGQGGLEACPTCAQGSLWLPSAGLCSLPACFPSSSWALPQHPPEPLPFLAPAWPGIPE 180
ESPGQGGLEACPTCAQGSLWLPSAGLCSLPACFPSSSWALPQHPPEPLPFLAPAWPGIPE
Sbjct: 121 ESPGQGGLEACPTCAQGSLWLPSAGLCSLPACFPSSSWALPQHPPEPLPFLAPAWPGIPE 180
Query: 181 DAFTSPAPCLVDHHSCLLLLCPLPRAWETWEDPEGGSGMCDTSRRLTSSLAGSTLHREPA 240
DAF SPAPCLVDHHSCLLLLCPLPRAWETWEDPEGGSGMCDTSRRLTSSLAGSTLHREPA
Sbjct: 181 DAFASPAPCLVDHHSCLLLLCPLPRAWETWEDPEGGSGMCDTSRRLTSSLAGSTLHREPA 240
Query: 241 AMLPLSCPCGAAERDA 256
AMLPLSCPCGAAERDA
Sbjct: 241 AMLPLSCPCGAAERDA 256
>gi|32483397 dopamine receptor D4 [Homo sapiens]
Length = 419
Score = 39.7 bits (91), Expect = 0.003
Identities = 31/81 (38%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 102 GRAPQAPGGPPLPSCHPSWESPGQGGLEACPTCAQGSLWLPSAGLCSLPACFPSSSWALP 161
GRAP+ P GP PS P+ +P P CA P+ GL P C P + A P
Sbjct: 232 GRAPRRPSGPGPPS--PTPPAPRLPQDPCGPDCAP-----PAPGLPRGP-CGPDCAPAAP 283
Query: 162 QHPPEPL-PFLAPAWPGIPED 181
P +P P AP PG+P D
Sbjct: 284 SLPQDPCGPDCAPPAPGLPPD 304
>gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting
RhoGEF isoform b [Homo sapiens]
Length = 7968
Score = 38.9 bits (89), Expect = 0.004
Identities = 32/95 (33%), Positives = 36/95 (37%), Gaps = 12/95 (12%)
Query: 104 APQAPGGPPLPSCHPSWESPGQGGLEACPT---CAQGSLWLPSAGLCSLPACFPSSSW-A 159
+P +P G P P CHP S Q G P C GS G C PSS +
Sbjct: 7023 SPDSPWGQPAPFCHPKQGSAPQEGCSPHPAVAPCPPGSF---PPGSCKEAPLVPSSPFLG 7079
Query: 160 LPQHPPEPL----PFLAPAWPG-IPEDAFTSPAPC 189
PQ PP P P + PG I P PC
Sbjct: 7080 QPQAPPAPAKASPPLDSKMGPGDISLPGRPKPGPC 7114
>gi|90403598 mesoderm posterior 2 homolog [Homo sapiens]
Length = 397
Score = 37.7 bits (86), Expect = 0.010
Identities = 40/129 (31%), Positives = 49/129 (37%), Gaps = 25/129 (19%)
Query: 92 PVVQAVPGRCGRAPQAPGGPPLPSCHPSWESP---GQGGLEACPTCAQGSLWLPSAGLCS 148
P QA P R GR P P +SP QG T + SLW P G
Sbjct: 227 PGAQAAPERLGRGVHDTDPWATPPYCPKIQSPPYSSQG------TTSDASLWTPPQG--- 277
Query: 149 LPACFPSSSWALPQHPPEPLPF------LAPAWPGI---PEDAFTSPAPCLVDHHSCLLL 199
C + S P++PP P LA + G+ PE + AP L+ H SC L
Sbjct: 278 ---CPWTQSSPEPRNPPVPWTAAPATLELAAVYQGLSVSPEPCLSLGAPSLLPHPSCQRL 334
Query: 200 LCPLP-RAW 207
P R W
Sbjct: 335 QPQTPGRCW 343
>gi|19263349 Cbp/p300-interacting transactivator, with Glu/Asp-rich
carboxy-terminal domain, 4 [Homo sapiens]
Length = 184
Score = 36.6 bits (83), Expect = 0.022
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Query: 92 PVVQAVPGRCGRAPQAPGGPPLPSCHPSWESP-----GQGGLEA 130
PV PGR P APGGPP P PS +P GG++A
Sbjct: 91 PVATPYPGRAAAPPNAPGGPPGPQPAPSAAAPPPPAHALGGMDA 134
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 36.2 bits (82), Expect = 0.029
Identities = 43/149 (28%), Positives = 49/149 (32%), Gaps = 7/149 (4%)
Query: 46 LTCDTPGSSDARQVLLVRGRQELVLSGTRALLGAGGTWDLNHAGSWPVVQAVPGRCGRAP 105
L TP D V G LV R G + + PG P
Sbjct: 92 LAVPTPSVPDDFADKEVTGTSSLVNGNLRLYSSVGDLRPGQYGQDLLIPPPPPGPAPGPP 151
Query: 106 Q----APGGPPLPSCHPSWESPGQGGLEACPTCAQGSLWLPSAGLCSLPACFPSSSWALP 161
Q PGG PLPS + P LE P + P S P S S P
Sbjct: 152 QDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTP 211
Query: 162 QH---PPEPLPFLAPAWPGIPEDAFTSPA 187
P PL FLAP P +P A +PA
Sbjct: 212 PDFIPPAPPLAFLAPPPPPVPAPAPPAPA 240
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 36.2 bits (82), Expect = 0.029
Identities = 43/149 (28%), Positives = 49/149 (32%), Gaps = 7/149 (4%)
Query: 46 LTCDTPGSSDARQVLLVRGRQELVLSGTRALLGAGGTWDLNHAGSWPVVQAVPGRCGRAP 105
L TP D V G LV R G + + PG P
Sbjct: 92 LAVPTPSVPDDFADKEVTGTSSLVNGNLRLYSSVGDLRPGQYGQDLLIPPPPPGPAPGPP 151
Query: 106 Q----APGGPPLPSCHPSWESPGQGGLEACPTCAQGSLWLPSAGLCSLPACFPSSSWALP 161
Q PGG PLPS + P LE P + P S P S S P
Sbjct: 152 QDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTP 211
Query: 162 QH---PPEPLPFLAPAWPGIPEDAFTSPA 187
P PL FLAP P +P A +PA
Sbjct: 212 PDFIPPAPPLAFLAPPPPPVPAPAPPAPA 240
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 36.2 bits (82), Expect = 0.029
Identities = 43/149 (28%), Positives = 49/149 (32%), Gaps = 7/149 (4%)
Query: 46 LTCDTPGSSDARQVLLVRGRQELVLSGTRALLGAGGTWDLNHAGSWPVVQAVPGRCGRAP 105
L TP D V G LV R G + + PG P
Sbjct: 92 LAVPTPSVPDDFADKEVTGTSSLVNGNLRLYSSVGDLRPGQYGQDLLIPPPPPGPAPGPP 151
Query: 106 Q----APGGPPLPSCHPSWESPGQGGLEACPTCAQGSLWLPSAGLCSLPACFPSSSWALP 161
Q PGG PLPS + P LE P + P S P S S P
Sbjct: 152 QDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTP 211
Query: 162 QH---PPEPLPFLAPAWPGIPEDAFTSPA 187
P PL FLAP P +P A +PA
Sbjct: 212 PDFIPPAPPLAFLAPPPPPVPAPAPPAPA 240
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 36.2 bits (82), Expect = 0.029
Identities = 30/79 (37%), Positives = 33/79 (41%), Gaps = 14/79 (17%)
Query: 98 PGRCGRAPQAPGGPPLPSCHPSWESPGQGGLEACPTCAQGSLWLPSAGLCSLPACFPSSS 157
P +C +P GP LP PS G PT A G LP G PAC PS
Sbjct: 647 PAQCVCSPPVSEGPVLPQSLPSL------GAYQQPTAAPG---LP-VGSVPAPACPPS-- 694
Query: 158 WALPQHPPEPLPFLAPAWP 176
L QH P+P AP P
Sbjct: 695 --LQQHFPDPAMSFAPVLP 711
Score = 28.1 bits (61), Expect = 7.8
Identities = 29/98 (29%), Positives = 36/98 (36%), Gaps = 16/98 (16%)
Query: 92 PVVQAVPGRCGRAPQAPGGPPLPSCHPSWESPGQGGLEACPTCAQGSLWLPSAGLCSLPA 151
P +A R AP+ P PP P P +P Q +L P+ LPA
Sbjct: 1458 PAPEAASTRDASAPREPLPPPAPEPSPHSGTP------------QPALGQPAP---LLPA 1502
Query: 152 CFPSSSWALPQHPPEPL-PFLAPAWPGIPEDAFTSPAP 188
+ S A Q P PL P + P P E P P
Sbjct: 1503 AVGAVSLATSQLPSPPLGPTVPPQPPSALESDGEGPPP 1540
>gi|10047144 sal-like 4 [Homo sapiens]
Length = 1053
Score = 35.0 bits (79), Expect = 0.064
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 102 GRAPQAPGGPPLPSCHPSWESPGQGGLEACPTCAQGS 138
G +P++ GGP LP P++ SP GG + T GS
Sbjct: 510 GPSPESEGGPTLPGVGPNYNSPRAGGFQGSGTPEPGS 546
>gi|57165355 latrophilin 1 isoform 1 precursor [Homo sapiens]
Length = 1474
Score = 35.0 bits (79), Expect = 0.064
Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 138 SLWLPSAGLCSLPACFPSSSWALPQHPPEPLPFLAPAWPGIPEDAFTSPAPCLV 191
SL+ A L P+ +P SS P+ P E LP PA PG PE +TS P LV
Sbjct: 1383 SLYASGANLRDSPS-YPDSS---PEGPSEALPPPPPAPPGPPEIYYTSRPPALV 1432
>gi|41281557 latrophilin 1 isoform 2 precursor [Homo sapiens]
Length = 1469
Score = 35.0 bits (79), Expect = 0.064
Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 138 SLWLPSAGLCSLPACFPSSSWALPQHPPEPLPFLAPAWPGIPEDAFTSPAPCLV 191
SL+ A L P+ +P SS P+ P E LP PA PG PE +TS P LV
Sbjct: 1378 SLYASGANLRDSPS-YPDSS---PEGPSEALPPPPPAPPGPPEIYYTSRPPALV 1427
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 35.0 bits (79), Expect = 0.064
Identities = 29/96 (30%), Positives = 37/96 (38%), Gaps = 12/96 (12%)
Query: 94 VQAVPGRCGRAPQAPGGPPLPSCHPSWES-PGQGGLEACPTCAQGSLWLPSAGLCSLPAC 152
+Q P + P +P PP PS HP + G G + P+ AQ P P
Sbjct: 246 IQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQ-----PPLHGQGPPGP 300
Query: 153 FPSSSWALPQHPPEPLPFLAPAWPGIPEDAFTSPAP 188
+ L QHP P PF G+P A AP
Sbjct: 301 HSLQAGPLLQHPGPPQPF------GLPPQASQGQAP 330
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 35.0 bits (79), Expect = 0.064
Identities = 29/96 (30%), Positives = 37/96 (38%), Gaps = 12/96 (12%)
Query: 94 VQAVPGRCGRAPQAPGGPPLPSCHPSWES-PGQGGLEACPTCAQGSLWLPSAGLCSLPAC 152
+Q P + P +P PP PS HP + G G + P+ AQ P P
Sbjct: 800 IQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQ-----PPLHGQGPPGP 854
Query: 153 FPSSSWALPQHPPEPLPFLAPAWPGIPEDAFTSPAP 188
+ L QHP P PF G+P A AP
Sbjct: 855 HSLQAGPLLQHPGPPQPF------GLPPQASQGQAP 884
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 35.0 bits (79), Expect = 0.064
Identities = 29/96 (30%), Positives = 37/96 (38%), Gaps = 12/96 (12%)
Query: 94 VQAVPGRCGRAPQAPGGPPLPSCHPSWES-PGQGGLEACPTCAQGSLWLPSAGLCSLPAC 152
+Q P + P +P PP PS HP + G G + P+ AQ P P
Sbjct: 800 IQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQ-----PPLHGQGPPGP 854
Query: 153 FPSSSWALPQHPPEPLPFLAPAWPGIPEDAFTSPAP 188
+ L QHP P PF G+P A AP
Sbjct: 855 HSLQAGPLLQHPGPPQPF------GLPPQASQGQAP 884
>gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo
sapiens]
Length = 939
Score = 34.7 bits (78), Expect = 0.083
Identities = 30/92 (32%), Positives = 37/92 (40%), Gaps = 17/92 (18%)
Query: 110 GPPLPSCHPSWESPGQGGLEACPTCAQGSLWLPSAGLCSLPACF--PSSSWALPQHPPEP 167
G P+P+ P+ + G EA PT G PS S PA P +S AL + PPEP
Sbjct: 354 GKPIPTLEPALATESPPGAEAKPTSPTG----PSVCASSRPALAKRPVASKALCEGPPEP 409
Query: 168 -LPFLAPAW----------PGIPEDAFTSPAP 188
P W PG P + AP
Sbjct: 410 QAAGCRPQWGKPAQPKLEGPGAPTQGGSKEAP 441
>gi|75677594 forkhead box D4 [Homo sapiens]
Length = 439
Score = 34.7 bits (78), Expect = 0.083
Identities = 32/102 (31%), Positives = 42/102 (41%), Gaps = 13/102 (12%)
Query: 112 PLPSCHPSWESPGQGGLEACPTCAQGSLWLPSAGLCSLPACFPSSSWALPQHPPEPLPFL 171
PLP+ H + +P G L P Q +P A + P P + L HPP L
Sbjct: 216 PLPAAHAALHNPRPGPLLGAPAPPQP---VPGAYPNTGPGRRPYA--LLHPHPPRYLLLS 270
Query: 172 APAWPGIPED------AFTSPAPCLVDHHSCLLLLCPLPRAW 207
APA+ G P+ A +P PC H +L L R W
Sbjct: 271 APAYAGAPKKAEGADLATPAPFPCCSPH--LVLSLGRRARVW 310
>gi|52630419 sterol regulatory element binding transcription factor
1 isoform a [Homo sapiens]
Length = 1177
Score = 33.9 bits (76), Expect = 0.14
Identities = 47/152 (30%), Positives = 62/152 (40%), Gaps = 24/152 (15%)
Query: 118 PSWESPGQGGLE-ACP-TCAQGSLWLPSAGLCSLPACFPSSSWALPQ--HPPEPLPFLAP 173
P + G GG + A P T + GSL P A L S F S A P PP+P P
Sbjct: 79 PPYAGSGAGGTDPASPDTSSPGSLSPPPATLSSSLEAFLSGPQAAPSPLSPPQPAPTPLK 138
Query: 174 AWPGIPEDAFTSPAPCLVDHHSCLLLL-----CPLPRAWETWEDPEGGSGMCDTSRRL-- 226
+P +P AF SP P + + L +L PLP A P ++ L
Sbjct: 139 MYPSMP--AF-SPGPGIKEESVPLSILQTPTPQPLPGALLPQSFPAPAPPQFSSTPVLGY 195
Query: 227 --------TSSLAGSTLHREPAAMLPLSCPCG 250
T S G+T ++P LPL+ P G
Sbjct: 196 PSPPGGFSTGSPPGNT--QQPLPGLPLASPPG 225
>gi|22547195 sterol regulatory element binding transcription factor
1 isoform b [Homo sapiens]
Length = 1147
Score = 33.9 bits (76), Expect = 0.14
Identities = 47/152 (30%), Positives = 62/152 (40%), Gaps = 24/152 (15%)
Query: 118 PSWESPGQGGLE-ACP-TCAQGSLWLPSAGLCSLPACFPSSSWALPQ--HPPEPLPFLAP 173
P + G GG + A P T + GSL P A L S F S A P PP+P P
Sbjct: 49 PPYAGSGAGGTDPASPDTSSPGSLSPPPATLSSSLEAFLSGPQAAPSPLSPPQPAPTPLK 108
Query: 174 AWPGIPEDAFTSPAPCLVDHHSCLLLL-----CPLPRAWETWEDPEGGSGMCDTSRRL-- 226
+P +P AF SP P + + L +L PLP A P ++ L
Sbjct: 109 MYPSMP--AF-SPGPGIKEESVPLSILQTPTPQPLPGALLPQSFPAPAPPQFSSTPVLGY 165
Query: 227 --------TSSLAGSTLHREPAAMLPLSCPCG 250
T S G+T ++P LPL+ P G
Sbjct: 166 PSPPGGFSTGSPPGNT--QQPLPGLPLASPPG 195
>gi|239752663 PREDICTED: similar to HSPC088 [Homo sapiens]
Length = 190
Score = 33.9 bits (76), Expect = 0.14
Identities = 47/142 (33%), Positives = 57/142 (40%), Gaps = 24/142 (16%)
Query: 77 LGAGGTWDLNHAGSWPVVQAVPGRCGRAPQAPGGP-PLPSCHPSWESPGQGGLEACPTCA 135
LGAG + H S + A PG AP APG P P PS + Q + C
Sbjct: 31 LGAGPRTERRHWPSGALHSARPGAANAAP-APGHPAPAPSV--TRRRAEQQDVIRC---- 83
Query: 136 QGSLW-------LPSAGLCSLPACFPSSSWAL---PQHPPEPLPFLAPAWPGIPEDAFTS 185
+ LW LP L +LP SS + P P P+ L A P FT
Sbjct: 84 RRRLWERCETPRLPEIALRALPRPGVSSLGTILCVPSVPVGPI-VLTSATP--ESSRFTR 140
Query: 186 PAPCLV---DHHSCLLLLCPLP 204
PAP V HS +L L P+P
Sbjct: 141 PAPSTVPEAHRHSRILRLAPVP 162
>gi|154355000 KH-type splicing regulatory protein [Homo sapiens]
Length = 711
Score = 33.9 bits (76), Expect = 0.14
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 18/100 (18%)
Query: 98 PGRCGRAPQAPGGPPLPSCHPSWESPGQGGLEACPTCAQGSLWLPSA----GLCSLPACF 153
PG + P PG PP P + P QG P W P A + A
Sbjct: 520 PGPFNQGP--PGAPPHAGGPPPHQYPPQGWGNTYPQ------WQPPAPHDPSKAAAAAAD 571
Query: 154 PSSSWALP-----QHPPEPLPFLAPAWPGIPEDAFTSPAP 188
P+++WA Q PP P+P APA P P P P
Sbjct: 572 PNAAWAAYYSHYYQQPPGPVPGPAPA-PAAPPAQGEPPQP 610
>gi|18959276 forkhead box D4-like 1 [Homo sapiens]
Length = 408
Score = 33.9 bits (76), Expect = 0.14
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 112 PLPSCHPSWESPGQGGLEACPTCAQGSLWLPSAGLCSLPACFPSSSWALPQHPPEPLPFL 171
PLP+ H + +P G L P Q +P A + P P + L HPP L
Sbjct: 219 PLPAAHAALHNPRPGPLLGAPALPQP---VPGAYPNTAPGRRPYA--LLHPHPPRYLLLS 273
Query: 172 APAWPGIPEDA 182
APA+ G P+ A
Sbjct: 274 APAYAGAPKKA 284
>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
Length = 1240
Score = 33.9 bits (76), Expect = 0.14
Identities = 35/105 (33%), Positives = 40/105 (38%), Gaps = 20/105 (19%)
Query: 92 PVVQAVPGRCGRAPQAPGGPPLPSCHPSWESPGQGGLEACPTCAQGSLWLPSAGLCS--- 148
P +PG P P PPLPS G +A PT A LP G +
Sbjct: 425 PPPPLLPGSSAEPPPPPPPPPLPSV----------GAKALPT-APPPPPLPGLGAMAPPA 473
Query: 149 --LPACFPSSSWALPQHPPEPLPFLA---PAWPGIPEDAFTSPAP 188
LP P S LP PP PLP L P P +P + P P
Sbjct: 474 PPLPPPLPGSCEFLPP-PPPPLPGLGCPPPPPPLLPGMGWGPPPP 517
>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
Length = 1249
Score = 33.9 bits (76), Expect = 0.14
Identities = 35/105 (33%), Positives = 40/105 (38%), Gaps = 20/105 (19%)
Query: 92 PVVQAVPGRCGRAPQAPGGPPLPSCHPSWESPGQGGLEACPTCAQGSLWLPSAGLCS--- 148
P +PG P P PPLPS G +A PT A LP G +
Sbjct: 425 PPPPLLPGSSAEPPPPPPPPPLPSV----------GAKALPT-APPPPPLPGLGAMAPPA 473
Query: 149 --LPACFPSSSWALPQHPPEPLPFLA---PAWPGIPEDAFTSPAP 188
LP P S LP PP PLP L P P +P + P P
Sbjct: 474 PPLPPPLPGSCEFLPP-PPPPLPGLGCPPPPPPLLPGMGWGPPPP 517
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 33.9 bits (76), Expect = 0.14
Identities = 34/126 (26%), Positives = 47/126 (37%), Gaps = 18/126 (14%)
Query: 78 GAGGTWDLNHAGSWPVVQAVPGRCGRAPQAPGGPPLPSCHPSWESPG-QGGL-----EAC 131
G T L A + P + G A +P G P+P P+ P +GGL +
Sbjct: 1069 GGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMP---PAATPPSPKGGLATPPHKGA 1125
Query: 132 PTCAQGSLWLPSAGLCSLP---------ACFPSSSWALPQHPPEPLPFLAPAWPGIPEDA 182
PT + P GL + P A PS L PP+ P A P P+
Sbjct: 1126 PTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGG 1185
Query: 183 FTSPAP 188
+P+P
Sbjct: 1186 LATPSP 1191
>gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 33.5 bits (75), Expect = 0.19
Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Query: 94 VQAVPGRCGRAPQAPGGPPLPSCHPSWESPGQGGLE---ACPTCAQGSLWLPSAGLCSLP 150
V A+P G PQ P PP P ++ P Q + P+ + S S+ S
Sbjct: 55 VAALPCAPGPPPQPPPQPP----PPQYDYPPQSTFKPKAEVPSSSSSSSSSSSSSSSSSS 110
Query: 151 ACFPSSSWALPQHPPEPLPFLAPAWPGIPEDAFTSPAPCLVD 192
+ SSS A PP P F AP P + + AF +P +VD
Sbjct: 111 SSSSSSSQAKKPDPPLPPAFGAPP-PPLFDAAFPTPQWGIVD 151
>gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 33.5 bits (75), Expect = 0.19
Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Query: 94 VQAVPGRCGRAPQAPGGPPLPSCHPSWESPGQGGLE---ACPTCAQGSLWLPSAGLCSLP 150
V A+P G PQ P PP P ++ P Q + P+ + S S+ S
Sbjct: 55 VAALPCAPGPPPQPPPQPP----PPQYDYPPQSTFKPKAEVPSSSSSSSSSSSSSSSSSS 110
Query: 151 ACFPSSSWALPQHPPEPLPFLAPAWPGIPEDAFTSPAPCLVD 192
+ SSS A PP P F AP P + + AF +P +VD
Sbjct: 111 SSSSSSSQAKKPDPPLPPAFGAPP-PPLFDAAFPTPQWGIVD 151
>gi|239742065 PREDICTED: hypothetical protein XP_002342402 [Homo
sapiens]
Length = 381
Score = 33.5 bits (75), Expect = 0.19
Identities = 35/115 (30%), Positives = 44/115 (38%), Gaps = 29/115 (25%)
Query: 98 PGRCGRAPQAPGG--PPLPS-CH--PSWESPGQGGLEACPTCAQGSLW---LPSAGLCSL 149
PG+ GRAP GG PS CH PSW + CA W LP++ +
Sbjct: 288 PGQGGRAPAHAGGLCNAAPSGCHPAPSWVA-----------CAHTGAWGTGLPASHVPCA 336
Query: 150 PACFPSSSWALPQHPPEPLPFLAPAWPGIPEDAFTSPAPCLVDHHSCLLLLCPLP 204
P P A +P L P+ P + + PAP L LC LP
Sbjct: 337 PGALPQG--AFGSQGARAVPVLQPS-QAAPAEGISQPAPALG-------TLCSLP 381
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.477
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,672,959
Number of Sequences: 37866
Number of extensions: 935340
Number of successful extensions: 4050
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 261
Number of HSP's that attempted gapping in prelim test: 3756
Number of HSP's gapped (non-prelim): 567
length of query: 256
length of database: 18,247,518
effective HSP length: 100
effective length of query: 156
effective length of database: 14,460,918
effective search space: 2255903208
effective search space used: 2255903208
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.