Guide to the Human Genome
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Name: LOC729204 Sequence: fasta or formatted (301aa) NCBI GI: 169204294
Description:

PREDICTED: similar to hCG2045644

Not currently referenced in the text

Other entries for this name:
alt prot {363aa} PREDICTED: similar to hCG2045644
alt prot {301aa} PREDICTED: similar to hCG2045644
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.3         34           4
 C cysteine            2.0          6           1
 D aspartate           1.7          5           1
 E glutamate           4.0         12           1
 F phenylalanine       2.7          8           2
 G glycine             8.0         24           2
 H histidine           3.7         11           1
 I isoleucine          2.3          7           1
 K lysine              1.7          5           1
 L leucine            10.6         32           3
 M methionine          1.0          3           1
 N asparagine          2.3          7           2
 P proline            12.0         36           2
 Q glutamine           3.3         10           2
 R arginine           12.3         37           4
 S serine             10.0         30           2
 T threonine           4.7         14           1
 V valine              4.0         12           2
 W tryptophan          1.7          5           1
 Y tyrosine            1.0          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to hCG2045644 
LOC729204             0.995   PREDICTED: similar to hCG2045644 
LOC729204             0.892   PREDICTED: similar to hCG2045644 
LOC100132999          0.020   PREDICTED: hypothetical protein 
LOC730256             0.020   PREDICTED: hypothetical protein 
MYO16                 0.018   myosin heavy chain Myr 8 
LOC729370             0.018   PREDICTED: hypothetical protein 
KIAA1522              0.018   hypothetical protein LOC57648 
LOC100288496          0.017   PREDICTED: hypothetical protein XP_002342747 
SRRM2                 0.017   splicing coactivator subunit SRm300 
LOC100288801          0.017   PREDICTED: hypothetical protein XP_002342402 
LMTK3                 0.017   lemur tyrosine kinase 3 
RXRB                  0.015   retinoid X receptor, beta 
BLNK                  0.015   B-cell linker isoform 1 
ZNF828                0.015   zinc finger protein 828 
FLJ22184              0.015   PREDICTED: hypothetical protein LOC80164 
PRPF38A               0.015   PRP38 pre-mRNA processing factor 38 (yeast) domain c...
LOC441086             0.013   PREDICTED: hypothetical protein 
LOC100287514          0.013   PREDICTED: hypothetical protein XP_002343754 
LOC728650             0.013   PREDICTED: hypothetical protein 
RADIL                 0.013   Rap GTPase interactor 
TAF4                  0.013   TBP-associated factor 4 
RSBN1                 0.013   round spermatid basic protein 1 
RSPH3                 0.013   radial spoke 3 homolog 
LOC388906             0.013   PREDICTED: hypothetical protein 
LOC388906             0.013   PREDICTED: hypothetical protein 
LOC100287499          0.013   PREDICTED: hypothetical protein 
LOC388906             0.013   PREDICTED: hypothetical protein 
LOC100287499          0.013   PREDICTED: hypothetical protein XP_002343643 
LOC441086             0.013   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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