Guide to the Human Genome
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Name: CBWD7 Sequence: fasta or formatted (247aa) NCBI GI: 169177343
Description:

PREDICTED: COBW domain containing 7

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.8          7           1
 C cysteine            0.8          2           1
 D aspartate           8.1         20           2
 E glutamate           7.7         19           2
 F phenylalanine       2.4          6           1
 G glycine             4.9         12           1
 H histidine           3.2          8           1
 I isoleucine          8.5         21           2
 K lysine              7.7         19           2
 L leucine            12.1         30           2
 M methionine          1.2          3           1
 N asparagine          4.9         12           1
 P proline             2.4          6           1
 Q glutamine           5.7         14           2
 R arginine            4.0         10           1
 S serine              4.9         12           1
 T threonine           7.7         19           2
 V valine              8.1         20           1
 W tryptophan          1.6          4           1
 Y tyrosine            1.2          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: COBW domain containing 7 
CBWD3                 1.000   COBW domain containing 3 
CBWD6                 0.989   COBW domain containing 6 
CBWD2                 0.985   COBW domain-containing protein 2 
CBWD1                 0.985   COBW domain containing 1 isoform 2 
CBWD1                 0.985   COBW domain containing 1 isoform 1 
CBWD1                 0.882   COBW domain containing 1 isoform 3 
CBWD5                 0.752   COBW domain containing 5 
LOC653510             0.712   PREDICTED: similar to COBW domain containing 1 [Hom...
LOC653510             0.066   PREDICTED: hypothetical protein 
EFTUD2                0.015   elongation factor Tu GTP binding domain containing ...
EFTUD2                0.015   elongation factor Tu GTP binding domain containing ...
LOC730658             0.013   PREDICTED: similar to UPF0634 protein KIAA1641 [Hom...
ANKRD36               0.013   PREDICTED: ankyrin repeat domain 36 
ANKRD36B              0.013   ankyrin repeat domain 36B 
LRRFIP2               0.009   leucine rich repeat (in FLII) interacting protein 2 i...
SYNE1                 0.006   spectrin repeat containing, nuclear envelope 1 isofo...
SYNE1                 0.006   spectrin repeat containing, nuclear envelope 1 isof...
PDE4DIP               0.006   phosphodiesterase 4D interacting protein isoform 2 [...
PDE4DIP               0.006   phosphodiesterase 4D interacting protein isoform 5 [...
PDE4DIP               0.006   phosphodiesterase 4D interacting protein isoform 1 ...
ITGAM                 0.006   integrin alpha M isoform 1 precursor 
ITGAM                 0.006   integrin alpha M isoform 2 precursor 
RYR3                  0.006   ryanodine receptor 3 
MYT1L                 0.006   myelin transcription factor 1-like 
ACTBL3                0.006   PREDICTED: actin, beta-like 3 
ACTBL3                0.006   PREDICTED: actin, beta-like 3 
ACTBL3                0.006   PREDICTED: kappa-actin 
COL12A1               0.006   collagen, type XII, alpha 1 short isoform precursor ...
COL12A1               0.006   collagen, type XII, alpha 1 long isoform precursor [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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