Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CBWD2 Sequence: fasta or formatted (395aa) NCBI GI: 33469141
Description:

COBW domain-containing protein 2

Referenced in:

Additional Enzymes and Related Sequences

Other entries for this name:
alt prot [77aa] PREDICTED: COBW domain containing 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         22           1
 C cysteine            1.5          6           2
 D aspartate           6.6         26           2
 E glutamate          10.1         40           4
 F phenylalanine       2.0          8           1
 G glycine             6.8         27           2
 H histidine           2.3          9           1
 I isoleucine          6.6         26           2
 K lysine              7.1         28           2
 L leucine            12.7         50           2
 M methionine          1.5          6           1
 N asparagine          4.3         17           1
 P proline             3.0         12           1
 Q glutamine           4.6         18           2
 R arginine            3.3         13           1
 S serine              5.3         21           1
 T threonine           6.6         26           2
 V valine              7.1         28           1
 W tryptophan          1.3          5           1
 Y tyrosine            1.8          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   COBW domain-containing protein 2 
CBWD1                 0.986   COBW domain containing 1 isoform 1 
CBWD3                 0.979   COBW domain containing 3 
CBWD6                 0.972   COBW domain containing 6 
CBWD1                 0.924   COBW domain containing 1 isoform 3 
CBWD1                 0.855   COBW domain containing 1 isoform 2 
CBWD5                 0.830   COBW domain containing 5 
CBWD7                 0.607   PREDICTED: COBW domain containing 7 
LOC653510             0.431   PREDICTED: similar to COBW domain containing 1 [Hom...
CBWD2                 0.136   PREDICTED: COBW domain containing 2 
LOC653510             0.041   PREDICTED: hypothetical protein 
FAM178A               0.011   hypothetical protein LOC55719 isoform 1 
FAM178A               0.011   hypothetical protein LOC55719 isoform 2 
LOC730658             0.008   PREDICTED: similar to UPF0634 protein KIAA1641 [Hom...
ANKRD36               0.008   PREDICTED: ankyrin repeat domain 36 
ANKRD36B              0.008   ankyrin repeat domain 36B 
PDE4DIP               0.008   phosphodiesterase 4D interacting protein isoform 2 [...
PDE4DIP               0.008   phosphodiesterase 4D interacting protein isoform 5 [...
PDE4DIP               0.008   phosphodiesterase 4D interacting protein isoform 1 ...
SLC12A1               0.007   sodium potassium chloride cotransporter 2 
RYR3                  0.007   ryanodine receptor 3 
EFTUD2                0.007   elongation factor Tu GTP binding domain containing ...
EFTUD2                0.007   elongation factor Tu GTP binding domain containing ...
C17orf75              0.007   hypothetical protein LOC64149 
ABCA8                 0.007   ATP-binding cassette, sub-family A member 8 
ASMTL                 0.007   acetylserotonin O-methyltransferase-like 
ETS1                  0.005   v-ets erythroblastosis virus E26 oncogene homolog 1...
ETS1                  0.005   v-ets erythroblastosis virus E26 oncogene homolog 1 i...
ETS1                  0.005   v-ets erythroblastosis virus E26 oncogene homolog 1...
LRRFIP2               0.005   leucine rich repeat (in FLII) interacting protein 2 i...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press