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Search of human proteins with 169167163
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169167163 PREDICTED: hypothetical protein [Homo sapiens]
(154 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169167163 PREDICTED: hypothetical protein [Homo sapiens] 329 7e-91
gi|169166849 PREDICTED: hypothetical protein [Homo sapiens] 327 2e-90
gi|169166280 PREDICTED: hypothetical protein [Homo sapiens] 327 2e-90
gi|23308541 hypothetical protein LOC152756 [Homo sapiens] 225 1e-59
gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-ch... 34 0.043
gi|53832005 calcium channel, voltage-dependent, R type, alpha 1E... 32 0.28
gi|209529739 hypothetical protein LOC100132247 [Homo sapiens] 31 0.37
gi|157074225 nuclear pore complex interacting protein-like 3 [Ho... 31 0.37
gi|70608155 phosphodiesterase 3A [Homo sapiens] 30 0.63
gi|239745414 PREDICTED: NPIP-like protein 2 isoform 2 [Homo sapi... 30 0.63
gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens] 30 0.82
gi|11034811 catenin (cadherin-associated protein), delta 2 (neur... 30 1.1
gi|45120119 microtubule associated serine/threonine kinase 1 [Ho... 29 1.4
gi|241896935 WD repeat domain 25 [Homo sapiens] 29 1.4
gi|241896933 WD repeat domain 25 [Homo sapiens] 29 1.4
gi|34740327 zinc finger protein 804A [Homo sapiens] 29 1.4
gi|26024197 diacylglycerol O-acyltransferase 2 [Homo sapiens] 29 1.4
gi|37622894 ring finger protein 126 [Homo sapiens] 29 1.4
gi|169212906 PREDICTED: NPIP-like protein ENSP00000283050 isofor... 29 1.8
gi|156546910 BRAF35/HDAC2 complex isoform b [Homo sapiens] 29 1.8
gi|156546894 BRAF35/HDAC2 complex isoform a [Homo sapiens] 29 1.8
gi|22749269 ring finger protein 129 [Homo sapiens] 29 1.8
gi|94536846 synaptotagmin VIII [Homo sapiens] 29 1.8
gi|14269566 megakaryoblastic leukemia 1 protein [Homo sapiens] 28 2.4
gi|83367077 mucin 16 [Homo sapiens] 28 3.1
gi|169171485 PREDICTED: hypothetical protein [Homo sapiens] 28 3.1
gi|169164483 PREDICTED: hypothetical protein [Homo sapiens] 28 3.1
gi|239751395 PREDICTED: hypothetical protein, partial [Homo sapi... 28 3.1
gi|113414226 PREDICTED: hypothetical protein [Homo sapiens] 28 3.1
gi|239745904 PREDICTED: hypothetical protein, partial [Homo sapi... 28 3.1
>gi|169167163 PREDICTED: hypothetical protein [Homo sapiens]
Length = 154
Score = 329 bits (843), Expect = 7e-91
Identities = 154/154 (100%), Positives = 154/154 (100%)
Query: 1 MEGCAVWQGSCPLLTGPSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDP 60
MEGCAVWQGSCPLLTGPSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDP
Sbjct: 1 MEGCAVWQGSCPLLTGPSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDP 60
Query: 61 ATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSSNTPAVTPLKLPSNSNSEGPPGK 120
ATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSSNTPAVTPLKLPSNSNSEGPPGK
Sbjct: 61 ATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSSNTPAVTPLKLPSNSNSEGPPGK 120
Query: 121 GRKIITIRSQPLFVTRTRGFGSAVGWLPLGSPVL 154
GRKIITIRSQPLFVTRTRGFGSAVGWLPLGSPVL
Sbjct: 121 GRKIITIRSQPLFVTRTRGFGSAVGWLPLGSPVL 154
>gi|169166849 PREDICTED: hypothetical protein [Homo sapiens]
Length = 154
Score = 327 bits (839), Expect = 2e-90
Identities = 153/154 (99%), Positives = 153/154 (99%)
Query: 1 MEGCAVWQGSCPLLTGPSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDP 60
MEGCAVWQGSCPLLTGPSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDP
Sbjct: 1 MEGCAVWQGSCPLLTGPSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDP 60
Query: 61 ATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSSNTPAVTPLKLPSNSNSEGPPGK 120
ATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSSNTP VTPLKLPSNSNSEGPPGK
Sbjct: 61 ATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSSNTPVVTPLKLPSNSNSEGPPGK 120
Query: 121 GRKIITIRSQPLFVTRTRGFGSAVGWLPLGSPVL 154
GRKIITIRSQPLFVTRTRGFGSAVGWLPLGSPVL
Sbjct: 121 GRKIITIRSQPLFVTRTRGFGSAVGWLPLGSPVL 154
>gi|169166280 PREDICTED: hypothetical protein [Homo sapiens]
Length = 154
Score = 327 bits (839), Expect = 2e-90
Identities = 153/154 (99%), Positives = 153/154 (99%)
Query: 1 MEGCAVWQGSCPLLTGPSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDP 60
MEGCAVWQGSCPLLTGPSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDP
Sbjct: 1 MEGCAVWQGSCPLLTGPSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDP 60
Query: 61 ATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSSNTPAVTPLKLPSNSNSEGPPGK 120
ATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSSNTP VTPLKLPSNSNSEGPPGK
Sbjct: 61 ATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSSNTPVVTPLKLPSNSNSEGPPGK 120
Query: 121 GRKIITIRSQPLFVTRTRGFGSAVGWLPLGSPVL 154
GRKIITIRSQPLFVTRTRGFGSAVGWLPLGSPVL
Sbjct: 121 GRKIITIRSQPLFVTRTRGFGSAVGWLPLGSPVL 154
>gi|23308541 hypothetical protein LOC152756 [Homo sapiens]
Length = 157
Score = 225 bits (573), Expect = 1e-59
Identities = 118/157 (75%), Positives = 122/157 (77%), Gaps = 3/157 (1%)
Query: 1 MEGCAVWQGSCPLLTGPSAWKAIPAGWAKRA-LRSWHRASGLPNRPYAEPQPLRQS--LC 57
MEGCAV +GSCPLL GPSAW+A PAGWA RA LRSW RASGLPNRPY S L
Sbjct: 1 MEGCAVRRGSCPLLPGPSAWRASPAGWAGRAKLRSWCRASGLPNRPYTLTGGRHGSVSLL 60
Query: 58 RDPATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSSNTPAVTPLKLPSNSNSEGP 117
R P TT VQQR LHQSWEK IVFS CPVSRS P RNFS + PAVTP KLP +S SEGP
Sbjct: 61 RHPGTTTFVQQRSLHQSWEKRIVFSACPVSRSWCPERNFSGSIPAVTPPKLPGHSKSEGP 120
Query: 118 PGKGRKIITIRSQPLFVTRTRGFGSAVGWLPLGSPVL 154
PGK RK TIRSQPLFVTRTRGFGSAVGWLPLGSPVL
Sbjct: 121 PGKVRKRTTIRSQPLFVTRTRGFGSAVGWLPLGSPVL 157
>gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-chain
family member 2 [Homo sapiens]
Length = 1122
Score = 34.3 bits (77), Expect = 0.043
Identities = 27/105 (25%), Positives = 39/105 (37%), Gaps = 26/105 (24%)
Query: 17 PSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDPATTILVQQRWLHQSWE 76
PSA KA+ W + A +SGLP PY + L+ + P
Sbjct: 205 PSARKAL-CNWVRMAAAEHRHSSGLPYWPYLTAETLKNRMGHQP---------------- 247
Query: 77 KLIVFSPCPVSRSCSPGRNFSSNTP---AVTPLKLPSNSNSEGPP 118
P P + C + S TP +TPL ++ N + PP
Sbjct: 248 ------PPPTQQHCITDNSLSLKTPLECLLTPLPPSADDNLKTPP 286
>gi|53832005 calcium channel, voltage-dependent, R type, alpha 1E
subunit [Homo sapiens]
Length = 2270
Score = 31.6 bits (70), Expect = 0.28
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Query: 39 SGLPNRPYAEPQPLRQSLCRDPATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSS 98
SG P+ PQ + Q C DPA Q+R + L+V P + RS S R+ S
Sbjct: 1933 SGYPSMSPLSPQDIFQLACMDPADDGQFQER------QSLVVTDPSSMRRSFSTIRDKRS 1986
Query: 99 NTPAVTPLKLPSNSNS 114
N+ + + +S +
Sbjct: 1987 NSSWLEEFSMERSSEN 2002
>gi|209529739 hypothetical protein LOC100132247 [Homo sapiens]
Length = 1133
Score = 31.2 bits (69), Expect = 0.37
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 7/105 (6%)
Query: 17 PSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDPATTILVQQRWLHQSWE 76
PSA KA+ W + A +SGLP PY + L+ + P QQ + +
Sbjct: 205 PSARKAL-CNWVRMAAAEHRHSSGLPYWPYLTAETLKNRMGHQPPPP--TQQHSITDNSL 261
Query: 77 KLIVFSPCPVSRSCSPGRNFSSNTP---AVTPLKLPSNSNSEGPP 118
L C ++ P + + TP +TPL ++ N + PP
Sbjct: 262 SLKTPPECLLT-PLPPSADDNLKTPPECVLTPLPPSADDNLKTPP 305
>gi|157074225 nuclear pore complex interacting protein-like 3 [Homo
sapiens]
Length = 678
Score = 31.2 bits (69), Expect = 0.37
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 7/105 (6%)
Query: 17 PSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDPATTILVQQRWLHQSWE 76
PSA KA+ W + A +SGLP PY + L+ + P QQ + +
Sbjct: 205 PSARKAL-CNWVRMAAAEHRHSSGLPYWPYLTAETLKNRMGHQPPPP--TQQHSITDNSL 261
Query: 77 KLIVFSPCPVSRSCSPGRNFSSNTP---AVTPLKLPSNSNSEGPP 118
L C ++ P + + TP +TPL ++ N + PP
Sbjct: 262 SLKTPPECLLT-PLPPSADDNLKTPPECVLTPLPPSADDNLKTPP 305
>gi|70608155 phosphodiesterase 3A [Homo sapiens]
Length = 1141
Score = 30.4 bits (67), Expect = 0.63
Identities = 27/119 (22%), Positives = 47/119 (39%), Gaps = 32/119 (26%)
Query: 21 KAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDPATTILVQQ--RWLHQSWEKL 78
+++P G +R +W + P EP P+R RD +T+I +Q+ SW
Sbjct: 427 RSLPPGLLRRVSSTWTTTTSATGLPTLEPAPVR----RDRSTSIKLQEAPSSSPDSWNN- 481
Query: 79 IVFSPCPVSRSCSPGRNFSSN-------------------TPAVTPLKLPSNSNSEGPP 118
PV + + R+F+S+ ++PL P +S +G P
Sbjct: 482 ------PVMMTLTKSRSFTSSYAISAANHVKAKKQSRPGALAKISPLSSPCSSPLQGTP 534
>gi|239745414 PREDICTED: NPIP-like protein 2 isoform 2 [Homo
sapiens]
Length = 380
Score = 30.4 bits (67), Expect = 0.63
Identities = 26/105 (24%), Positives = 38/105 (36%), Gaps = 26/105 (24%)
Query: 17 PSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDPATTILVQQRWLHQSWE 76
PSA KA+ W + A +SGLP PY + L+ + P
Sbjct: 203 PSARKAL-CNWVRMAAAEHRHSSGLPYWPYLTAETLKNRMGHQP---------------- 245
Query: 77 KLIVFSPCPVSRSCSPGRNFSSNTP---AVTPLKLPSNSNSEGPP 118
P P + + S TP +TPL ++ N + PP
Sbjct: 246 ------PPPTQQHSITDNSLSLKTPPECLLTPLPPSADDNLKTPP 284
>gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens]
Length = 1444
Score = 30.0 bits (66), Expect = 0.82
Identities = 35/115 (30%), Positives = 45/115 (39%), Gaps = 9/115 (7%)
Query: 17 PSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDPATT---ILVQQRWL-- 71
P A + GW ++ALRS+ SGL Q + +PA T L + + L
Sbjct: 989 PQAPRREITGWDEKALRSFREFSGLKGAEAPPNQKGPSGVQPNPAETSPISLAEGKELGT 1048
Query: 72 ---HQSWEKLIVFSPCPVSRSCSPGRNFSSNTPAVTPLKLPSNSNSEGPP-GKGR 122
H S + P P S S S +P P KL S GPP GK R
Sbjct: 1049 HLGHSSPQIRQGGVPGPESSKESSPSVQDSTSPGEHPAKLQLKSTECGPPKGKNR 1103
>gi|11034811 catenin (cadherin-associated protein), delta 2 (neural
plakophilin-related arm-repeat protein) [Homo sapiens]
Length = 1225
Score = 29.6 bits (65), Expect = 1.1
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 97 SSNTPAVTPLKLPSNSNSEGPPGKGRKIITIRSQ 130
SS TP+++P+++ N+ S P R++I+++ +
Sbjct: 1053 SSRTPSISPVRVSPNNRSASAPASPREMISLKER 1086
>gi|45120119 microtubule associated serine/threonine kinase 1 [Homo
sapiens]
Length = 1570
Score = 29.3 bits (64), Expect = 1.4
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 11/90 (12%)
Query: 40 GLPNRPYAEPQPLRQSLCRDPATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSSN 99
G ++ EP PL S+ P ++RW+ + E+ S P S+ SP +
Sbjct: 1454 GADSKGLQEPAPLAPSVPEAPRG----RERWVLEVVEERTTLSG-PRSKPASPKLSPEPQ 1508
Query: 100 TPAVTPLK--LPSNSNSEGPP----GKGRK 123
TP++ P K PS++ + PP G G K
Sbjct: 1509 TPSLAPAKCSAPSSAVTPVPPASLLGSGTK 1538
>gi|241896935 WD repeat domain 25 [Homo sapiens]
Length = 544
Score = 29.3 bits (64), Expect = 1.4
Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 12/77 (15%)
Query: 38 ASGLPNRPYAEPQPLRQSLCRDPATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFS 97
ASG + P A QP + C DP L + W CP R PG+
Sbjct: 51 ASGTLDVPKAGAQPTKHGSCEDPGGYRLPLAQLGRSDW------GSCPSQRLQWPGKE-- 102
Query: 98 SNTPAVT-PLKLPSNSN 113
P VT P+K PS S+
Sbjct: 103 ---PQVTFPIKEPSCSS 116
>gi|241896933 WD repeat domain 25 [Homo sapiens]
Length = 544
Score = 29.3 bits (64), Expect = 1.4
Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 12/77 (15%)
Query: 38 ASGLPNRPYAEPQPLRQSLCRDPATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFS 97
ASG + P A QP + C DP L + W CP R PG+
Sbjct: 51 ASGTLDVPKAGAQPTKHGSCEDPGGYRLPLAQLGRSDW------GSCPSQRLQWPGKE-- 102
Query: 98 SNTPAVT-PLKLPSNSN 113
P VT P+K PS S+
Sbjct: 103 ---PQVTFPIKEPSCSS 116
>gi|34740327 zinc finger protein 804A [Homo sapiens]
Length = 1209
Score = 29.3 bits (64), Expect = 1.4
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 11/96 (11%)
Query: 42 PNRPYAEPQPLRQSLCRDPATTI---LVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSS 98
P+ P +P PL+QSLC TTI ++QQ + + + P + F S
Sbjct: 1077 PSTPL-QPLPLQQSLCSTSVTTIHHTVLQQH--AAAAAAAAAAAAAGTFKVLQPHQQFLS 1133
Query: 99 NTPAVTPLKLPSNSNSEGPPGKGRKIITIRSQPLFV 134
PA+T LP S GP G + +QP FV
Sbjct: 1134 QIPALTRTSLP--QLSVGPVGPR---LCPGNQPTFV 1164
>gi|26024197 diacylglycerol O-acyltransferase 2 [Homo sapiens]
Length = 388
Score = 29.3 bits (64), Expect = 1.4
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 26 GWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDPATTILVQQRWLHQSWEKLIVFSPCP 85
G+ K ALR H A +P + E + +Q + + + RW+ + ++K I F+PC
Sbjct: 261 GFVKLALR--HGADLVPIYSFGENEVYKQVIFEEGSWG-----RWVQKKFQKYIGFAPC- 312
Query: 86 VSRSCSPGRN-FSSNTPAVTPLKLP 109
GR FSS+T + P P
Sbjct: 313 ----IFHGRGLFSSDTWGLVPYSKP 333
>gi|37622894 ring finger protein 126 [Homo sapiens]
Length = 311
Score = 29.3 bits (64), Expect = 1.4
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 84 CPVSRSCSPGRNFSSNTPAVTPLKLPSNSNSEGPPGKGRKIITIRS 129
CPV R G+N ++N P +T + S+S+S + T S
Sbjct: 266 CPVCRKSLTGQNTATNPPGLTGVSFSSSSSSSSSSSPSNENATSNS 311
>gi|169212906 PREDICTED: NPIP-like protein ENSP00000283050 isoform 3
[Homo sapiens]
Length = 363
Score = 28.9 bits (63), Expect = 1.8
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 17 PSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDP 60
PSA K + W + A +SGLP PY + L+ + R P
Sbjct: 205 PSARKPL-CNWVRMAAAEHRHSSGLPYWPYLTAETLKNRMGRQP 247
>gi|156546910 BRAF35/HDAC2 complex isoform b [Homo sapiens]
Length = 634
Score = 28.9 bits (63), Expect = 1.8
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 27/131 (20%)
Query: 7 WQGSCPLLTGPSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQ-----SLCRDPA 61
W G+ ++ A+KA K+ L W +S L Q ++Q S C +
Sbjct: 499 WPGTLAIVHSYIAYKAAKEE-EKQKLLKW--SSDLKQEREQLEQKVKQLSNSISKCMEMK 555
Query: 62 TTILVQQRWLHQSWEKL--------------IVFSPCPVSR-----SCSPGRNFSSNTPA 102
TIL +Q+ +H S EK+ V S V C+P N +++TPA
Sbjct: 556 NTILARQKEMHSSLEKVKQLIRLIHGIDLSKPVDSEATVGAISNGPDCTPPANAATSTPA 615
Query: 103 VTPLKLPSNSN 113
+P +N
Sbjct: 616 PSPSSQSCTAN 626
>gi|156546894 BRAF35/HDAC2 complex isoform a [Homo sapiens]
Length = 680
Score = 28.9 bits (63), Expect = 1.8
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 27/131 (20%)
Query: 7 WQGSCPLLTGPSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQ-----SLCRDPA 61
W G+ ++ A+KA K+ L W +S L Q ++Q S C +
Sbjct: 545 WPGTLAIVHSYIAYKAAKEE-EKQKLLKW--SSDLKQEREQLEQKVKQLSNSISKCMEMK 601
Query: 62 TTILVQQRWLHQSWEKL--------------IVFSPCPVSR-----SCSPGRNFSSNTPA 102
TIL +Q+ +H S EK+ V S V C+P N +++TPA
Sbjct: 602 NTILARQKEMHSSLEKVKQLIRLIHGIDLSKPVDSEATVGAISNGPDCTPPANAATSTPA 661
Query: 103 VTPLKLPSNSN 113
+P +N
Sbjct: 662 PSPSSQSCTAN 672
>gi|22749269 ring finger protein 129 [Homo sapiens]
Length = 471
Score = 28.9 bits (63), Expect = 1.8
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 71 LHQSWEKLIVFSPCPVSRSCSPGRNFSSN 99
L SW+ L PCPV R C P ++F N
Sbjct: 40 LSVSWKDLDDTFPCPVCRFCFPYKSFRRN 68
>gi|94536846 synaptotagmin VIII [Homo sapiens]
Length = 401
Score = 28.9 bits (63), Expect = 1.8
Identities = 17/49 (34%), Positives = 22/49 (44%)
Query: 5 AVWQGSCPLLTGPSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLR 53
AVW S PL T P + A + + L+ W RP A+ PLR
Sbjct: 329 AVWDRSLPLRTEPVGKVHLGARASGQPLQHWADMLAHARRPIAQRHPLR 377
>gi|14269566 megakaryoblastic leukemia 1 protein [Homo sapiens]
Length = 931
Score = 28.5 bits (62), Expect = 2.4
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 64 ILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSSNTPAVTPLKLPSNSNSEGPPG 119
IL QQ+ H +++ ++ P + SS TP V L ++S+S G PG
Sbjct: 274 ILNQQQQQHHNYQAILPAPPKSAGEALG-----SSGTPPVRSLSTTNSSSSSGAPG 324
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 28.1 bits (61), Expect = 3.1
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 68 QRWLHQSWEKLIVFSPCPVSRSCSPGRNFSSNTPAVTPLKLPSNSNSEGPPGKGRKIITI 127
QR+ H L+ P +S SP S+ P++ L LP+ ++ PP +TI
Sbjct: 7064 QRFPHSEMTTLMSRGPGDMSWQSSPSLENPSSLPSL--LSLPATTSP--PPISSTLPVTI 7119
Query: 128 RSQPLFVT 135
S PL VT
Sbjct: 7120 SSSPLPVT 7127
>gi|169171485 PREDICTED: hypothetical protein [Homo sapiens]
Length = 349
Score = 28.1 bits (61), Expect = 3.1
Identities = 29/80 (36%), Positives = 30/80 (37%), Gaps = 21/80 (26%)
Query: 8 QGSCPLLTGPSAWKAIPAG-----WA-KRALRSWHRAS---------GLPNRP----YAE 48
QG L GP AW AI G WA R R W R G P RP A
Sbjct: 125 QGLLGALRGPQAWSAIRTGCRALEWAPHRGSRRWARLGFRVPSGVGWGGPERPKALKAAW 184
Query: 49 PQPLRQSLCRDPATTILVQQ 68
P PL S + PA QQ
Sbjct: 185 PAPL--STAKAPAGLSAAQQ 202
>gi|169164483 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 28.1 bits (61), Expect = 3.1
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 2 EGCAVWQGSCPLLTGPSAWKAIPAGWAKRALRSWHRASG-LPNRPYAEPQPLRQSLCRDP 60
+G A + P TG + P +R LRS H SG P RP + P ++L R P
Sbjct: 187 QGAAAVGPTGPRPTGAPPSRRTPPPGPRRPLRSPHSGSGWTPARPPSPPAGAPEAL-RPP 245
Query: 61 ATT 63
A+T
Sbjct: 246 AST 248
>gi|239751395 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 28.1 bits (61), Expect = 3.1
Identities = 18/62 (29%), Positives = 26/62 (41%)
Query: 71 LHQSWEKLIVFSPCPVSRSCSPGRNFSSNTPAVTPLKLPSNSNSEGPPGKGRKIITIRSQ 130
L S + ++ S P SP SNTP +TP P+ + S P T+ Q
Sbjct: 26 LTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPQ 85
Query: 131 PL 132
P+
Sbjct: 86 PI 87
>gi|113414226 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 28.1 bits (61), Expect = 3.1
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 2 EGCAVWQGSCPLLTGPSAWKAIPAGWAKRALRSWHRASG-LPNRPYAEPQPLRQSLCRDP 60
+G A + P TG + P +R LRS H SG P RP + P ++L R P
Sbjct: 187 QGAAAVGPTGPRPTGAPPSRRTPPPGPRRPLRSPHSGSGWTPARPPSPPAGAPEAL-RPP 245
Query: 61 ATT 63
A+T
Sbjct: 246 AST 248
>gi|239745904 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 28.1 bits (61), Expect = 3.1
Identities = 18/62 (29%), Positives = 26/62 (41%)
Query: 71 LHQSWEKLIVFSPCPVSRSCSPGRNFSSNTPAVTPLKLPSNSNSEGPPGKGRKIITIRSQ 130
L S + ++ S P SP SNTP +TP P+ + S P T+ Q
Sbjct: 26 LTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPQ 85
Query: 131 PL 132
P+
Sbjct: 86 PI 87
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.454
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,179,493
Number of Sequences: 37866
Number of extensions: 437550
Number of successful extensions: 1412
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 1363
Number of HSP's gapped (non-prelim): 90
length of query: 154
length of database: 18,247,518
effective HSP length: 93
effective length of query: 61
effective length of database: 14,725,980
effective search space: 898284780
effective search space used: 898284780
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.