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Search of human proteins with 169166849
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169166849 PREDICTED: hypothetical protein [Homo sapiens]
(154 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169166849 PREDICTED: hypothetical protein [Homo sapiens] 329 7e-91
gi|169166280 PREDICTED: hypothetical protein [Homo sapiens] 329 7e-91
gi|169167163 PREDICTED: hypothetical protein [Homo sapiens] 327 2e-90
gi|23308541 hypothetical protein LOC152756 [Homo sapiens] 223 4e-59
gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-ch... 35 0.025
gi|209529739 hypothetical protein LOC100132247 [Homo sapiens] 33 0.13
gi|157074225 nuclear pore complex interacting protein-like 3 [Ho... 33 0.13
gi|70608155 phosphodiesterase 3A [Homo sapiens] 32 0.28
gi|53832005 calcium channel, voltage-dependent, R type, alpha 1E... 32 0.28
gi|239745414 PREDICTED: NPIP-like protein 2 isoform 2 [Homo sapi... 31 0.37
gi|241896935 WD repeat domain 25 [Homo sapiens] 29 1.8
gi|241896933 WD repeat domain 25 [Homo sapiens] 29 1.8
gi|169212906 PREDICTED: NPIP-like protein ENSP00000283050 isofor... 29 1.8
gi|22749269 ring finger protein 129 [Homo sapiens] 29 1.8
gi|94536846 synaptotagmin VIII [Homo sapiens] 29 1.8
gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens] 29 1.8
gi|11034811 catenin (cadherin-associated protein), delta 2 (neur... 28 2.4
gi|166706915 GLIS family zinc finger 1 [Homo sapiens] 28 2.4
gi|167234405 hypothetical protein LOC284325 [Homo sapiens] 28 2.4
gi|14269566 megakaryoblastic leukemia 1 protein [Homo sapiens] 28 3.1
gi|169171485 PREDICTED: hypothetical protein [Homo sapiens] 28 3.1
gi|169164483 PREDICTED: hypothetical protein [Homo sapiens] 28 3.1
gi|239751395 PREDICTED: hypothetical protein, partial [Homo sapi... 28 3.1
gi|113414226 PREDICTED: hypothetical protein [Homo sapiens] 28 3.1
gi|239745904 PREDICTED: hypothetical protein, partial [Homo sapi... 28 3.1
gi|113413437 PREDICTED: hypothetical protein [Homo sapiens] 28 3.1
gi|26024197 diacylglycerol O-acyltransferase 2 [Homo sapiens] 28 3.1
gi|37622894 ring finger protein 126 [Homo sapiens] 28 3.1
gi|62526120 glycolipid transfer protein domain containing 2 [Hom... 28 3.1
gi|34740327 zinc finger protein 804A [Homo sapiens] 28 4.1
>gi|169166849 PREDICTED: hypothetical protein [Homo sapiens]
Length = 154
Score = 329 bits (843), Expect = 7e-91
Identities = 154/154 (100%), Positives = 154/154 (100%)
Query: 1 MEGCAVWQGSCPLLTGPSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDP 60
MEGCAVWQGSCPLLTGPSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDP
Sbjct: 1 MEGCAVWQGSCPLLTGPSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDP 60
Query: 61 ATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSSNTPVVTPLKLPSNSNSEGPPGK 120
ATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSSNTPVVTPLKLPSNSNSEGPPGK
Sbjct: 61 ATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSSNTPVVTPLKLPSNSNSEGPPGK 120
Query: 121 GRKIITIRSQPLFVTRTRGFGSAVGWLPLGSPVL 154
GRKIITIRSQPLFVTRTRGFGSAVGWLPLGSPVL
Sbjct: 121 GRKIITIRSQPLFVTRTRGFGSAVGWLPLGSPVL 154
>gi|169166280 PREDICTED: hypothetical protein [Homo sapiens]
Length = 154
Score = 329 bits (843), Expect = 7e-91
Identities = 154/154 (100%), Positives = 154/154 (100%)
Query: 1 MEGCAVWQGSCPLLTGPSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDP 60
MEGCAVWQGSCPLLTGPSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDP
Sbjct: 1 MEGCAVWQGSCPLLTGPSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDP 60
Query: 61 ATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSSNTPVVTPLKLPSNSNSEGPPGK 120
ATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSSNTPVVTPLKLPSNSNSEGPPGK
Sbjct: 61 ATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSSNTPVVTPLKLPSNSNSEGPPGK 120
Query: 121 GRKIITIRSQPLFVTRTRGFGSAVGWLPLGSPVL 154
GRKIITIRSQPLFVTRTRGFGSAVGWLPLGSPVL
Sbjct: 121 GRKIITIRSQPLFVTRTRGFGSAVGWLPLGSPVL 154
>gi|169167163 PREDICTED: hypothetical protein [Homo sapiens]
Length = 154
Score = 327 bits (839), Expect = 2e-90
Identities = 153/154 (99%), Positives = 153/154 (99%)
Query: 1 MEGCAVWQGSCPLLTGPSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDP 60
MEGCAVWQGSCPLLTGPSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDP
Sbjct: 1 MEGCAVWQGSCPLLTGPSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDP 60
Query: 61 ATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSSNTPVVTPLKLPSNSNSEGPPGK 120
ATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSSNTP VTPLKLPSNSNSEGPPGK
Sbjct: 61 ATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSSNTPAVTPLKLPSNSNSEGPPGK 120
Query: 121 GRKIITIRSQPLFVTRTRGFGSAVGWLPLGSPVL 154
GRKIITIRSQPLFVTRTRGFGSAVGWLPLGSPVL
Sbjct: 121 GRKIITIRSQPLFVTRTRGFGSAVGWLPLGSPVL 154
>gi|23308541 hypothetical protein LOC152756 [Homo sapiens]
Length = 157
Score = 223 bits (569), Expect = 4e-59
Identities = 117/157 (74%), Positives = 121/157 (77%), Gaps = 3/157 (1%)
Query: 1 MEGCAVWQGSCPLLTGPSAWKAIPAGWAKRA-LRSWHRASGLPNRPYAEPQPLRQS--LC 57
MEGCAV +GSCPLL GPSAW+A PAGWA RA LRSW RASGLPNRPY S L
Sbjct: 1 MEGCAVRRGSCPLLPGPSAWRASPAGWAGRAKLRSWCRASGLPNRPYTLTGGRHGSVSLL 60
Query: 58 RDPATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSSNTPVVTPLKLPSNSNSEGP 117
R P TT VQQR LHQSWEK IVFS CPVSRS P RNFS + P VTP KLP +S SEGP
Sbjct: 61 RHPGTTTFVQQRSLHQSWEKRIVFSACPVSRSWCPERNFSGSIPAVTPPKLPGHSKSEGP 120
Query: 118 PGKGRKIITIRSQPLFVTRTRGFGSAVGWLPLGSPVL 154
PGK RK TIRSQPLFVTRTRGFGSAVGWLPLGSPVL
Sbjct: 121 PGKVRKRTTIRSQPLFVTRTRGFGSAVGWLPLGSPVL 157
>gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-chain
family member 2 [Homo sapiens]
Length = 1122
Score = 35.0 bits (79), Expect = 0.025
Identities = 27/105 (25%), Positives = 40/105 (38%), Gaps = 26/105 (24%)
Query: 17 PSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDPATTILVQQRWLHQSWE 76
PSA KA+ W + A +SGLP PY + L+ + P
Sbjct: 205 PSARKAL-CNWVRMAAAEHRHSSGLPYWPYLTAETLKNRMGHQP---------------- 247
Query: 77 KLIVFSPCPVSRSCSPGRNFSSNTP---VVTPLKLPSNSNSEGPP 118
P P + C + S TP ++TPL ++ N + PP
Sbjct: 248 ------PPPTQQHCITDNSLSLKTPLECLLTPLPPSADDNLKTPP 286
>gi|209529739 hypothetical protein LOC100132247 [Homo sapiens]
Length = 1133
Score = 32.7 bits (73), Expect = 0.13
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 7/105 (6%)
Query: 17 PSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDPATTILVQQRWLHQSWE 76
PSA KA+ W + A +SGLP PY + L+ + P QQ + +
Sbjct: 205 PSARKAL-CNWVRMAAAEHRHSSGLPYWPYLTAETLKNRMGHQPPPP--TQQHSITDNSL 261
Query: 77 KLIVFSPCPVSRSCSPGRNFSSNTP---VVTPLKLPSNSNSEGPP 118
L C ++ P + + TP V+TPL ++ N + PP
Sbjct: 262 SLKTPPECLLT-PLPPSADDNLKTPPECVLTPLPPSADDNLKTPP 305
>gi|157074225 nuclear pore complex interacting protein-like 3 [Homo
sapiens]
Length = 678
Score = 32.7 bits (73), Expect = 0.13
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 7/105 (6%)
Query: 17 PSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDPATTILVQQRWLHQSWE 76
PSA KA+ W + A +SGLP PY + L+ + P QQ + +
Sbjct: 205 PSARKAL-CNWVRMAAAEHRHSSGLPYWPYLTAETLKNRMGHQPPPP--TQQHSITDNSL 261
Query: 77 KLIVFSPCPVSRSCSPGRNFSSNTP---VVTPLKLPSNSNSEGPP 118
L C ++ P + + TP V+TPL ++ N + PP
Sbjct: 262 SLKTPPECLLT-PLPPSADDNLKTPPECVLTPLPPSADDNLKTPP 305
>gi|70608155 phosphodiesterase 3A [Homo sapiens]
Length = 1141
Score = 31.6 bits (70), Expect = 0.28
Identities = 27/119 (22%), Positives = 48/119 (40%), Gaps = 32/119 (26%)
Query: 21 KAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDPATTILVQQ--RWLHQSWEKL 78
+++P G +R +W + P EP P+R RD +T+I +Q+ SW
Sbjct: 427 RSLPPGLLRRVSSTWTTTTSATGLPTLEPAPVR----RDRSTSIKLQEAPSSSPDSWNN- 481
Query: 79 IVFSPCPVSRSCSPGRNFSSNTPV-------------------VTPLKLPSNSNSEGPP 118
PV + + R+F+S+ + ++PL P +S +G P
Sbjct: 482 ------PVMMTLTKSRSFTSSYAISAANHVKAKKQSRPGALAKISPLSSPCSSPLQGTP 534
>gi|53832005 calcium channel, voltage-dependent, R type, alpha 1E
subunit [Homo sapiens]
Length = 2270
Score = 31.6 bits (70), Expect = 0.28
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Query: 39 SGLPNRPYAEPQPLRQSLCRDPATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSS 98
SG P+ PQ + Q C DPA Q+R + L+V P + RS S R+ S
Sbjct: 1933 SGYPSMSPLSPQDIFQLACMDPADDGQFQER------QSLVVTDPSSMRRSFSTIRDKRS 1986
Query: 99 NTPVVTPLKLPSNSNS 114
N+ + + +S +
Sbjct: 1987 NSSWLEEFSMERSSEN 2002
>gi|239745414 PREDICTED: NPIP-like protein 2 isoform 2 [Homo
sapiens]
Length = 380
Score = 31.2 bits (69), Expect = 0.37
Identities = 26/105 (24%), Positives = 39/105 (37%), Gaps = 26/105 (24%)
Query: 17 PSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDPATTILVQQRWLHQSWE 76
PSA KA+ W + A +SGLP PY + L+ + P
Sbjct: 203 PSARKAL-CNWVRMAAAEHRHSSGLPYWPYLTAETLKNRMGHQP---------------- 245
Query: 77 KLIVFSPCPVSRSCSPGRNFSSNTP---VVTPLKLPSNSNSEGPP 118
P P + + S TP ++TPL ++ N + PP
Sbjct: 246 ------PPPTQQHSITDNSLSLKTPPECLLTPLPPSADDNLKTPP 284
>gi|241896935 WD repeat domain 25 [Homo sapiens]
Length = 544
Score = 28.9 bits (63), Expect = 1.8
Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 12/77 (15%)
Query: 38 ASGLPNRPYAEPQPLRQSLCRDPATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFS 97
ASG + P A QP + C DP L + W CP R PG+
Sbjct: 51 ASGTLDVPKAGAQPTKHGSCEDPGGYRLPLAQLGRSDW------GSCPSQRLQWPGKE-- 102
Query: 98 SNTPVVT-PLKLPSNSN 113
P VT P+K PS S+
Sbjct: 103 ---PQVTFPIKEPSCSS 116
>gi|241896933 WD repeat domain 25 [Homo sapiens]
Length = 544
Score = 28.9 bits (63), Expect = 1.8
Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 12/77 (15%)
Query: 38 ASGLPNRPYAEPQPLRQSLCRDPATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFS 97
ASG + P A QP + C DP L + W CP R PG+
Sbjct: 51 ASGTLDVPKAGAQPTKHGSCEDPGGYRLPLAQLGRSDW------GSCPSQRLQWPGKE-- 102
Query: 98 SNTPVVT-PLKLPSNSN 113
P VT P+K PS S+
Sbjct: 103 ---PQVTFPIKEPSCSS 116
>gi|169212906 PREDICTED: NPIP-like protein ENSP00000283050 isoform 3
[Homo sapiens]
Length = 363
Score = 28.9 bits (63), Expect = 1.8
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 17 PSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDP 60
PSA K + W + A +SGLP PY + L+ + R P
Sbjct: 205 PSARKPL-CNWVRMAAAEHRHSSGLPYWPYLTAETLKNRMGRQP 247
>gi|22749269 ring finger protein 129 [Homo sapiens]
Length = 471
Score = 28.9 bits (63), Expect = 1.8
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 71 LHQSWEKLIVFSPCPVSRSCSPGRNFSSN 99
L SW+ L PCPV R C P ++F N
Sbjct: 40 LSVSWKDLDDTFPCPVCRFCFPYKSFRRN 68
>gi|94536846 synaptotagmin VIII [Homo sapiens]
Length = 401
Score = 28.9 bits (63), Expect = 1.8
Identities = 17/49 (34%), Positives = 22/49 (44%)
Query: 5 AVWQGSCPLLTGPSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLR 53
AVW S PL T P + A + + L+ W RP A+ PLR
Sbjct: 329 AVWDRSLPLRTEPVGKVHLGARASGQPLQHWADMLAHARRPIAQRHPLR 377
>gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens]
Length = 1444
Score = 28.9 bits (63), Expect = 1.8
Identities = 35/115 (30%), Positives = 45/115 (39%), Gaps = 9/115 (7%)
Query: 17 PSAWKAIPAGWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDPATT---ILVQQRWL-- 71
P A + GW ++ALRS+ SGL Q + +PA T L + + L
Sbjct: 989 PQAPRREITGWDEKALRSFREFSGLKGAEAPPNQKGPSGVQPNPAETSPISLAEGKELGT 1048
Query: 72 ---HQSWEKLIVFSPCPVSRSCSPGRNFSSNTPVVTPLKLPSNSNSEGPP-GKGR 122
H S + P P S S S +P P KL S GPP GK R
Sbjct: 1049 HLGHSSPQIRQGGVPGPESSKESSPSVQDSTSPGEHPAKLQLKSTECGPPKGKNR 1103
>gi|11034811 catenin (cadherin-associated protein), delta 2 (neural
plakophilin-related arm-repeat protein) [Homo sapiens]
Length = 1225
Score = 28.5 bits (62), Expect = 2.4
Identities = 10/34 (29%), Positives = 22/34 (64%)
Query: 97 SSNTPVVTPLKLPSNSNSEGPPGKGRKIITIRSQ 130
SS TP ++P+++ N+ S P R++I+++ +
Sbjct: 1053 SSRTPSISPVRVSPNNRSASAPASPREMISLKER 1086
>gi|166706915 GLIS family zinc finger 1 [Homo sapiens]
Length = 620
Score = 28.5 bits (62), Expect = 2.4
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
Query: 82 SPCPVSRSCSPGRNFSSNTPVVTPLK------LPSNSNSEGPPGKGRKIITIRSQPLF 133
SP P++ S G +P+V+PLK LP +S S P G+ T+ S+P +
Sbjct: 442 SPLPMAESTRDGLGPGLLSPIVSPLKGLGPPPLPPSSQSHSP--GGQPFPTLPSKPSY 497
>gi|167234405 hypothetical protein LOC284325 [Homo sapiens]
Length = 351
Score = 28.5 bits (62), Expect = 2.4
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 83 PCPVSRSCSPGRNFSSNTPVVTPLKLPSNSNSEGP 117
P P+ S P +S TPV PL LP + GP
Sbjct: 33 PSPLDFSALPSPPWSQQTPVPPPLPLPPPPAATGP 67
>gi|14269566 megakaryoblastic leukemia 1 protein [Homo sapiens]
Length = 931
Score = 28.1 bits (61), Expect = 3.1
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 64 ILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSSNTPVVTPLKLPSNSNSEGPPG 119
IL QQ+ H +++ ++ P + SS TP V L ++S+S G PG
Sbjct: 274 ILNQQQQQHHNYQAILPAPPKSAGEALG-----SSGTPPVRSLSTTNSSSSSGAPG 324
>gi|169171485 PREDICTED: hypothetical protein [Homo sapiens]
Length = 349
Score = 28.1 bits (61), Expect = 3.1
Identities = 29/80 (36%), Positives = 30/80 (37%), Gaps = 21/80 (26%)
Query: 8 QGSCPLLTGPSAWKAIPAG-----WA-KRALRSWHRAS---------GLPNRP----YAE 48
QG L GP AW AI G WA R R W R G P RP A
Sbjct: 125 QGLLGALRGPQAWSAIRTGCRALEWAPHRGSRRWARLGFRVPSGVGWGGPERPKALKAAW 184
Query: 49 PQPLRQSLCRDPATTILVQQ 68
P PL S + PA QQ
Sbjct: 185 PAPL--STAKAPAGLSAAQQ 202
>gi|169164483 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 28.1 bits (61), Expect = 3.1
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 2 EGCAVWQGSCPLLTGPSAWKAIPAGWAKRALRSWHRASG-LPNRPYAEPQPLRQSLCRDP 60
+G A + P TG + P +R LRS H SG P RP + P ++L R P
Sbjct: 187 QGAAAVGPTGPRPTGAPPSRRTPPPGPRRPLRSPHSGSGWTPARPPSPPAGAPEAL-RPP 245
Query: 61 ATT 63
A+T
Sbjct: 246 AST 248
>gi|239751395 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 28.1 bits (61), Expect = 3.1
Identities = 18/62 (29%), Positives = 26/62 (41%)
Query: 71 LHQSWEKLIVFSPCPVSRSCSPGRNFSSNTPVVTPLKLPSNSNSEGPPGKGRKIITIRSQ 130
L S + ++ S P SP SNTP +TP P+ + S P T+ Q
Sbjct: 26 LTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPQ 85
Query: 131 PL 132
P+
Sbjct: 86 PI 87
>gi|113414226 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 28.1 bits (61), Expect = 3.1
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 2 EGCAVWQGSCPLLTGPSAWKAIPAGWAKRALRSWHRASG-LPNRPYAEPQPLRQSLCRDP 60
+G A + P TG + P +R LRS H SG P RP + P ++L R P
Sbjct: 187 QGAAAVGPTGPRPTGAPPSRRTPPPGPRRPLRSPHSGSGWTPARPPSPPAGAPEAL-RPP 245
Query: 61 ATT 63
A+T
Sbjct: 246 AST 248
>gi|239745904 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 28.1 bits (61), Expect = 3.1
Identities = 18/62 (29%), Positives = 26/62 (41%)
Query: 71 LHQSWEKLIVFSPCPVSRSCSPGRNFSSNTPVVTPLKLPSNSNSEGPPGKGRKIITIRSQ 130
L S + ++ S P SP SNTP +TP P+ + S P T+ Q
Sbjct: 26 LTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPQ 85
Query: 131 PL 132
P+
Sbjct: 86 PI 87
>gi|113413437 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 28.1 bits (61), Expect = 3.1
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 2 EGCAVWQGSCPLLTGPSAWKAIPAGWAKRALRSWHRASG-LPNRPYAEPQPLRQSLCRDP 60
+G A + P TG + P +R LRS H SG P RP + P ++L R P
Sbjct: 187 QGAAAVGPTGPRPTGAPPSRRTPPPGPRRPLRSPHSGSGWTPARPPSPPAGAPEAL-RPP 245
Query: 61 ATT 63
A+T
Sbjct: 246 AST 248
>gi|26024197 diacylglycerol O-acyltransferase 2 [Homo sapiens]
Length = 388
Score = 28.1 bits (61), Expect = 3.1
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 26 GWAKRALRSWHRASGLPNRPYAEPQPLRQSLCRDPATTILVQQRWLHQSWEKLIVFSPCP 85
G+ K ALR H A +P + E + +Q + + + RW+ + ++K I F+PC
Sbjct: 261 GFVKLALR--HGADLVPIYSFGENEVYKQVIFEEGSWG-----RWVQKKFQKYIGFAPC- 312
Query: 86 VSRSCSPGRN-FSSNTPVVTPLKLP 109
GR FSS+T + P P
Sbjct: 313 ----IFHGRGLFSSDTWGLVPYSKP 333
>gi|37622894 ring finger protein 126 [Homo sapiens]
Length = 311
Score = 28.1 bits (61), Expect = 3.1
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 84 CPVSRSCSPGRNFSSNTPVVTPLKLPSNSNSEGPPGKGRKIITIRS 129
CPV R G+N ++N P +T + S+S+S + T S
Sbjct: 266 CPVCRKSLTGQNTATNPPGLTGVSFSSSSSSSSSSSPSNENATSNS 311
>gi|62526120 glycolipid transfer protein domain containing 2 [Homo
sapiens]
Length = 291
Score = 28.1 bits (61), Expect = 3.1
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Query: 27 WAKRALRSWHRASGLPNRPYAEPQ-PLRQSLCRDPATTILVQQRWLHQSWEKL 78
W+ A+ +W R +GL +P A P+ P R S R T+L+ R L W +L
Sbjct: 149 WSLAAMAAWERRAGLLEQPGAAPRDPTRSSGSR----TLLLLHRALR--WSQL 195
>gi|34740327 zinc finger protein 804A [Homo sapiens]
Length = 1209
Score = 27.7 bits (60), Expect = 4.1
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 11/96 (11%)
Query: 42 PNRPYAEPQPLRQSLCRDPATTI---LVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSS 98
P+ P +P PL+QSLC TTI ++QQ + + + P + F S
Sbjct: 1077 PSTPL-QPLPLQQSLCSTSVTTIHHTVLQQH--AAAAAAAAAAAAAGTFKVLQPHQQFLS 1133
Query: 99 NTPVVTPLKLPSNSNSEGPPGKGRKIITIRSQPLFV 134
P +T LP S GP G + +QP FV
Sbjct: 1134 QIPALTRTSLP--QLSVGPVGPR---LCPGNQPTFV 1164
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,142,522
Number of Sequences: 37866
Number of extensions: 433814
Number of successful extensions: 1290
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 1247
Number of HSP's gapped (non-prelim): 80
length of query: 154
length of database: 18,247,518
effective HSP length: 93
effective length of query: 61
effective length of database: 14,725,980
effective search space: 898284780
effective search space used: 898284780
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.