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Search of human proteins with 169160903
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
(426 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 893 0.0
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 514 e-146
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 514 e-146
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 70 3e-12
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 66 7e-11
gi|110832843 TBP-associated factor 4 [Homo sapiens] 66 7e-11
gi|163965366 nascent polypeptide-associated complex alpha subuni... 65 2e-10
gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo ... 64 3e-10
gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo ... 64 3e-10
gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo ... 64 3e-10
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 63 6e-10
gi|89040432 PREDICTED: hypothetical protein [Homo sapiens] 62 8e-10
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 61 2e-09
gi|169207312 PREDICTED: hypothetical protein [Homo sapiens] 60 3e-09
gi|239750650 PREDICTED: hypothetical protein [Homo sapiens] 60 3e-09
gi|89037350 PREDICTED: hypothetical protein [Homo sapiens] 60 3e-09
gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo ... 59 8e-09
gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo ... 59 8e-09
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 59 8e-09
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 58 2e-08
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 57 2e-08
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 57 2e-08
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 57 2e-08
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 57 2e-08
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 57 3e-08
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 57 4e-08
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 56 5e-08
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 56 7e-08
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 56 7e-08
gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens] 55 1e-07
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 893 bits (2307), Expect = 0.0
Identities = 426/426 (100%), Positives = 426/426 (100%)
Query: 1 MERGQRFTPHPRTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPILPAPQRPPTRAREW 60
MERGQRFTPHPRTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPILPAPQRPPTRAREW
Sbjct: 1 MERGQRFTPHPRTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPILPAPQRPPTRAREW 60
Query: 61 EGAAWAAGATGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRR 120
EGAAWAAGATGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRR
Sbjct: 61 EGAAWAAGATGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRR 120
Query: 121 APSSAGKRPAAAARAAPPRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRP 180
APSSAGKRPAAAARAAPPRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRP
Sbjct: 121 APSSAGKRPAAAARAAPPRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRP 180
Query: 181 LPKPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRG 240
LPKPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRG
Sbjct: 181 LPKPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRG 240
Query: 241 GEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVS 300
GEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVS
Sbjct: 241 GEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVS 300
Query: 301 PREGAQGEGVRGGVTPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEVPG 360
PREGAQGEGVRGGVTPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEVPG
Sbjct: 301 PREGAQGEGVRGGVTPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEVPG 360
Query: 361 GHTASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHYLDRESGLGSVNSHPSRSPYNWSPP 420
GHTASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHYLDRESGLGSVNSHPSRSPYNWSPP
Sbjct: 361 GHTASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHYLDRESGLGSVNSHPSRSPYNWSPP 420
Query: 421 SPSVPP 426
SPSVPP
Sbjct: 421 SPSVPP 426
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 514 bits (1323), Expect = e-146
Identities = 280/396 (70%), Positives = 289/396 (72%), Gaps = 31/396 (7%)
Query: 37 SPTARAPPPILPAPQRPPTRAREWEGAAWAAGATGVGAALLALPGSRRLGRVPLTFREAS 96
SP PP L AP R + + + G G P + + F
Sbjct: 150 SPREPTPPGRLSAPPRHGPHPQSFRRPSAHPPGRGSGRVPRGQPEQQAWEQRSSHFLAPE 209
Query: 97 PGPAPGAPRARGSCGREPGPRRRR--APSSAGK----RPAAAARAAPPRQRSLARCLPRS 150
A P A+ + P PR R A S G+ RPAA A P LAR L S
Sbjct: 210 GSVASLLPSAKPARAPRPAPRAREEAAAGSRGRGGAERPAARGSAQQP---PLARLLLAS 266
Query: 151 VGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRLAAPLAGSRAPS 210
S+ SL R PPPLQPRLGSASPPRLAAPLAGSRAPS
Sbjct: 267 A-----VSLAASLAR-----------------SPPPLQPRLGSASPPRLAAPLAGSRAPS 304
Query: 211 LSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGSPP 270
LSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGSPP
Sbjct: 305 LSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGSPP 364
Query: 271 IPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQGEGVRGGVTPRARGSSTCLRPSPA 330
IPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQGEGVRGGVTPRARGSSTCLRPSPA
Sbjct: 365 IPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQGEGVRGGVTPRARGSSTCLRPSPA 424
Query: 331 TWQGGAPYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEPLSSRRTKAPSEGRDSPSSP 390
TWQGGAPYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEPLSSRRTKAPSEGRDSPSSP
Sbjct: 425 TWQGGAPYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEPLSSRRTKAPSEGRDSPSSP 484
Query: 391 ATSTHYLDRESGLGSVNSHPSRSPYNWSPPSPSVPP 426
ATSTHYLDRESGLGSVNSHPSRSPYNWSPPSPSVPP
Sbjct: 485 ATSTHYLDRESGLGSVNSHPSRSPYNWSPPSPSVPP 520
Score = 36.6 bits (83), Expect = 0.045
Identities = 70/264 (26%), Positives = 89/264 (33%), Gaps = 51/264 (19%)
Query: 12 RTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPILP--APQRPPTRAREWEGAAWAAGA 69
R A G + P A ++ + AR+PPP+ P PP AA AG+
Sbjct: 247 RPAARGSAQQPPLARLLLASAVSLAASLARSPPPLQPRLGSASPPRL------AAPLAGS 300
Query: 70 TGVGAALLALPGSRRLGR------VPLTFREASPGPAPGAPRARGSCGREPGPRRRRAPS 123
+ RR R +PL + G GA R RG G E R RR
Sbjct: 301 RAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRG--GEERRVRGRRQGC 358
Query: 124 SAGKRPAAAARAAPPR---QRSLARCLPRSVGSCVRPSVGPS--------LPRRHCRRHC 172
+ G P A AAP R +R+ + R G V P G PR C
Sbjct: 359 ALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQGEGVRGGVTPRARGSSTC 418
Query: 173 RCHCRRRPLPKPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLP 232
R P R A+ PRL+AP A AE P GH
Sbjct: 419 ---LRPSPATWQGGAPYRAIFAAGPRLSAPSA----------------EAEEVPGGHTAS 459
Query: 233 LPRSLSRGGEVVGARRRRGGEERR 256
P E + +RR + E R
Sbjct: 460 NPTY-----EPLSSRRTKAPSEGR 478
Score = 35.8 bits (81), Expect = 0.076
Identities = 61/226 (26%), Positives = 76/226 (33%), Gaps = 31/226 (13%)
Query: 180 PLPKPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSR 239
P P+P L R SP P S P P P+ RR + P +P R
Sbjct: 135 PTPEPQRLAARRWLHSPREPTPPGRLSAPPRHGPHPQSFRRPSAHPPGRGSGRVP----R 190
Query: 240 GGEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGV 299
G A +R G + P A AP RA E AA R RGG
Sbjct: 191 GQPEQQAWEQRSSHFLAPEGSVASLLPSAKPARAPRPAP-RAREEAAAGS-RGRGGAERP 248
Query: 300 SPREGAQGEGVRGGVTPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSA------ 353
+ R AQ + + A + L SP Q R A+ PRL+AP A
Sbjct: 249 AARGSAQQPPLARLLLASAVSLAASLARSPPPLQP----RLGSASPPRLAAPLAGSRAPS 304
Query: 354 ----------EAEEVPGGHTASNPTY-----EPLSSRRTKAPSEGR 384
AE P GH P E + +RR + E R
Sbjct: 305 LSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERR 350
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 514 bits (1323), Expect = e-146
Identities = 280/396 (70%), Positives = 289/396 (72%), Gaps = 31/396 (7%)
Query: 37 SPTARAPPPILPAPQRPPTRAREWEGAAWAAGATGVGAALLALPGSRRLGRVPLTFREAS 96
SP PP L AP R + + + G G P + + F
Sbjct: 150 SPREPTPPGRLSAPPRHGPHPQSFRRPSAHPPGRGSGRVPRGQPEQQAWEQRSSHFLAPE 209
Query: 97 PGPAPGAPRARGSCGREPGPRRRR--APSSAGK----RPAAAARAAPPRQRSLARCLPRS 150
A P A+ + P PR R A S G+ RPAA A P LAR L S
Sbjct: 210 GSVASLLPSAKPARAPRPAPRAREEAAAGSRGRGGAERPAARGSAQQP---PLARLLLAS 266
Query: 151 VGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRLAAPLAGSRAPS 210
S+ SL R PPPLQPRLGSASPPRLAAPLAGSRAPS
Sbjct: 267 A-----VSLAASLAR-----------------SPPPLQPRLGSASPPRLAAPLAGSRAPS 304
Query: 211 LSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGSPP 270
LSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGSPP
Sbjct: 305 LSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGSPP 364
Query: 271 IPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQGEGVRGGVTPRARGSSTCLRPSPA 330
IPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQGEGVRGGVTPRARGSSTCLRPSPA
Sbjct: 365 IPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQGEGVRGGVTPRARGSSTCLRPSPA 424
Query: 331 TWQGGAPYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEPLSSRRTKAPSEGRDSPSSP 390
TWQGGAPYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEPLSSRRTKAPSEGRDSPSSP
Sbjct: 425 TWQGGAPYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEPLSSRRTKAPSEGRDSPSSP 484
Query: 391 ATSTHYLDRESGLGSVNSHPSRSPYNWSPPSPSVPP 426
ATSTHYLDRESGLGSVNSHPSRSPYNWSPPSPSVPP
Sbjct: 485 ATSTHYLDRESGLGSVNSHPSRSPYNWSPPSPSVPP 520
Score = 36.6 bits (83), Expect = 0.045
Identities = 70/264 (26%), Positives = 89/264 (33%), Gaps = 51/264 (19%)
Query: 12 RTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPILP--APQRPPTRAREWEGAAWAAGA 69
R A G + P A ++ + AR+PPP+ P PP AA AG+
Sbjct: 247 RPAARGSAQQPPLARLLLASAVSLAASLARSPPPLQPRLGSASPPRL------AAPLAGS 300
Query: 70 TGVGAALLALPGSRRLGR------VPLTFREASPGPAPGAPRARGSCGREPGPRRRRAPS 123
+ RR R +PL + G GA R RG G E R RR
Sbjct: 301 RAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRG--GEERRVRGRRQGC 358
Query: 124 SAGKRPAAAARAAPPR---QRSLARCLPRSVGSCVRPSVGPS--------LPRRHCRRHC 172
+ G P A AAP R +R+ + R G V P G PR C
Sbjct: 359 ALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQGEGVRGGVTPRARGSSTC 418
Query: 173 RCHCRRRPLPKPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLP 232
R P R A+ PRL+AP A AE P GH
Sbjct: 419 ---LRPSPATWQGGAPYRAIFAAGPRLSAPSA----------------EAEEVPGGHTAS 459
Query: 233 LPRSLSRGGEVVGARRRRGGEERR 256
P E + +RR + E R
Sbjct: 460 NPTY-----EPLSSRRTKAPSEGR 478
Score = 35.8 bits (81), Expect = 0.076
Identities = 61/226 (26%), Positives = 76/226 (33%), Gaps = 31/226 (13%)
Query: 180 PLPKPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSR 239
P P+P L R SP P S P P P+ RR + P +P R
Sbjct: 135 PTPEPQRLAARRWLHSPREPTPPGRLSAPPRHGPHPQSFRRPSAHPPGRGSGRVP----R 190
Query: 240 GGEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGV 299
G A +R G + P A AP RA E AA R RGG
Sbjct: 191 GQPEQQAWEQRSSHFLAPEGSVASLLPSAKPARAPRPAP-RAREEAAAGS-RGRGGAERP 248
Query: 300 SPREGAQGEGVRGGVTPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSA------ 353
+ R AQ + + A + L SP Q R A+ PRL+AP A
Sbjct: 249 AARGSAQQPPLARLLLASAVSLAASLARSPPPLQP----RLGSASPPRLAAPLAGSRAPS 304
Query: 354 ----------EAEEVPGGHTASNPTY-----EPLSSRRTKAPSEGR 384
AE P GH P E + +RR + E R
Sbjct: 305 LSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERR 350
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 70.5 bits (171), Expect = 3e-12
Identities = 120/424 (28%), Positives = 151/424 (35%), Gaps = 86/424 (20%)
Query: 6 RFTPHPRTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPILPAPQRPPTRAREWEGAAW 65
R P R P P AP+ G A A P APPP PAP AR AA
Sbjct: 98 RVQPPRRGATPPAPPRAPR--GAPAAAAAAAPPPTPAPPPP-PAPVAAAAPARAPRAAA- 153
Query: 66 AAGATGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRAPSSA 125
A AT + A PG R PL A+P PAP AP A GPRR P+ A
Sbjct: 154 -AAATAPPSPGPAQPGPRAQRAAPL----AAPPPAPAAPPA---VAPPAGPRRAPPPAVA 205
Query: 126 GKRPAAAARAAPPRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPP 185
+ P PP P P+ P++ +PP
Sbjct: 206 AREP-----PLPP------------------PPQPPAPPQQQ---------------QPP 227
Query: 186 PLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVG 245
P QP+ PP A AG A +S R R G G GG +
Sbjct: 228 PPQPQ----PPPEGGAVRAGGAARPVS------LREVVRYLGGSG-------GAGGRLTR 270
Query: 246 AR-RRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWR-KRGGGPGVSPRE 303
R + EE RGR + LG+ +P G PGRA +AR R KRGG V +E
Sbjct: 271 GRVQGLLEEEAAARGRLERTRLGALALPRGD-RPGRAPPAASARPSRSKRGGEERVLEKE 329
Query: 304 GAQGEGV-RGGVTPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEVPGGH 362
+ + + GS PA GA + + SA E P G
Sbjct: 330 EEEDDDEDEDEEDDVSEGSEVPESDRPA----GAQHHQLNGERGPQSAKERVKEWTPCG- 384
Query: 363 TASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHYLDRESGLGSVNSHP-SRSPYNWSPPS 421
++ R AP G S A +++E G SV + P S SP P
Sbjct: 385 -----PHQGQDEGRGPAPGSGTRQVFSMAA----MNKEGGTASVATGPDSPSPVPLPPGK 435
Query: 422 PSVP 425
P++P
Sbjct: 436 PALP 439
Score = 38.5 bits (88), Expect = 0.012
Identities = 44/157 (28%), Positives = 54/157 (34%), Gaps = 22/157 (14%)
Query: 3 RGQRFTPHPRTP-APGCPEVAPQPEGTD-APGPAVCSPTARAPPPILPAPQRPPTRAR-- 58
R QR P P AP P P G AP PAV + PPP P P PP + +
Sbjct: 170 RAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPP--PQPPAPPQQQQPP 227
Query: 59 ------EWEGAAWAAGATGVGAALLAL----------PGSRRLGRVPLTFREASPGPAPG 102
EG A AG +L + G GRV E +
Sbjct: 228 PPQPQPPPEGGAVRAGGAARPVSLREVVRYLGGSGGAGGRLTRGRVQGLLEEEAAARGRL 287
Query: 103 APRARGSCGREPGPRRRRAPSSAGKRPAAAARAAPPR 139
G+ G R RAP +A RP+ + R R
Sbjct: 288 ERTRLGALALPRGDRPGRAPPAASARPSRSKRGGEER 324
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 65.9 bits (159), Expect = 7e-11
Identities = 117/454 (25%), Positives = 158/454 (34%), Gaps = 84/454 (18%)
Query: 32 GPAVCSPTARAP------PPILPAPQRPPT-RAREWEGAAWAAG-------ATGVGAALL 77
G A +P ARAP PP P P P T A GAA A G A G+G A +
Sbjct: 11 GAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATI 70
Query: 78 ----ALPGSRRLGRVPLTFR--------EASPGPAPGAPRARGSCGREPGPRRRRAPSSA 125
G R R P + R SPGP RA G+ PGP ++ +
Sbjct: 71 PESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGT--TRPGPLGQKGLRIS 128
Query: 126 GKRPAAAARAA-PPRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKP 184
+ A +A P++ +L+ R + P++ RR R LP+P
Sbjct: 129 AEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARR-----SRAAGTEVGLPRP 183
Query: 185 -PPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGL--PLPRSLSRGG 241
P +PR + P + + + SP RR R AG GL P RSLS
Sbjct: 184 APSARPRPPTEGPRKSVSSASEHSTTEPSPAARR------RPSAGGGLQRPASRSLSSSA 237
Query: 242 EVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSP 301
+ + R G R G+P PA P+ P G +A R + +P
Sbjct: 238 TPLSSPARSGPSAR-----------GTPRAPAHPSQPKPKG-LQALRPPQVTPPRKDAAP 285
Query: 302 REGAQGEGVRGGVTPRARGSST------------CLRPSPATWQGGAPYRAI---FAAGP 346
G +P A S + PS AT G+P F P
Sbjct: 286 ALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSP 345
Query: 347 RLSAPSAEAEEVPGG-------HTASNPTYEPLSSRRTKAPSEGR-------DSPSSPAT 392
LS + + P S P PLS T +P +P SP
Sbjct: 346 PLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPP 405
Query: 393 STHYLDRESGLGSVNSHPSRSPYNWSPPSPSVPP 426
S S S PS +P + +PPS + PP
Sbjct: 406 SPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPP 439
Score = 40.8 bits (94), Expect = 0.002
Identities = 101/414 (24%), Positives = 136/414 (32%), Gaps = 49/414 (11%)
Query: 7 FTPHP-----RTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPILPAPQRPPTRAREWE 61
F P P TP P P P P P P + P P+PQ P A
Sbjct: 341 FLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLS---PLATPSPQAPNALAVHLL 397
Query: 62 GAAWAAGATGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRARG-SCGREPGPRRRR 120
A ++ + A + P S P++ P AP + A P
Sbjct: 398 QAPFSPPPSPPVQAPFSPPAS-----PPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPM 452
Query: 121 APSSAGKRPAAAARAAPPRQRSLARCLPRSVGSCVRPSVG--PSLPRR---HCRRHCRCH 175
+PS+ A AAPP Q LA+ P++ + P + PS P
Sbjct: 453 SPSATPPPQAPPPLAAPPLQ--LAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSAS 510
Query: 176 CRRRPLPKPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPL-- 233
PL PPP P + +A P L P + +P+L R + S +G L L
Sbjct: 511 LPMSPLATPPPQAPPVLAA--PLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLAL 568
Query: 234 -----------PRSLSRGGEVVGARRRRGGEERRVRG---RRQGCALGSPPIPAGPAAPG 279
P S G ++ G +RG +G A SPP A AA
Sbjct: 569 APGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACH 628
Query: 280 RAGERRAARQWRKRGGGPGVS-PREGAQGEGVRGGV--------TPRARGSSTCLRPSPA 330
A R G PG P A G G G+ A + L P P+
Sbjct: 629 PAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPS 688
Query: 331 TWQGGAPYRAIFAAGPRLSAP-SAEAEEVPGGHTASNPTYEPLSSRRTKAPSEG 383
G A AG +P A E+P G ++ LS A +EG
Sbjct: 689 PGTSGGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAEG 742
Score = 39.7 bits (91), Expect = 0.005
Identities = 68/243 (27%), Positives = 87/243 (35%), Gaps = 46/243 (18%)
Query: 3 RGQRFTPHPRTPAPGCPEVAPQPEGTDAPGPA------VCSPTARAPPPILPAPQRPPTR 56
RG+R P T +PG + GT PGP + + A AP+R
Sbjct: 90 RGERAPPAKNT-SPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALS 148
Query: 57 A---REWEGAAWAAGATGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRARGSCGRE 113
A R+ G G A + +G +P A P P PR S E
Sbjct: 149 AGARRDTSGPT--PGTPSPAMARRSRAAGTEVG-LPRPAPSARPRPPTEGPRKSVSSASE 205
Query: 114 -----PGPRRRRAPSSAG--KRPA-------AAARAAPPRQRSLARCLPRSVGSCVRPSV 159
P P RR PS+ G +RPA A ++P R AR PR+
Sbjct: 206 HSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRA-------PA 258
Query: 160 GPSLPRRHCRRHCRCHCRRRPLPKPP--PLQPRLG--SASP---PRLAAPLAGSRAPSLS 212
PS P+ R P PP P LG S+SP P +AP + S PSL
Sbjct: 259 HPSQPKPK-----GLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQ 313
Query: 213 PFP 215
P
Sbjct: 314 TLP 316
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 65.9 bits (159), Expect = 7e-11
Identities = 101/416 (24%), Positives = 140/416 (33%), Gaps = 86/416 (20%)
Query: 11 PRTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPP----PILPAPQRPPTRARE--WEGAA 64
P PA G P AP+P P P PP P++PA PP EG+A
Sbjct: 75 PAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSA 134
Query: 65 WAAGATGVGAALLALP------GSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRR 118
+ AA+ A P ++ G L R A PGP PG G PGP +
Sbjct: 135 GSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAAR-AGPGPGPGPGPGPG-----PGPGK 188
Query: 119 RRAPSSAGKRPAAAARAAPPRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRR 178
P +A +AA + A L + + + P P+ P
Sbjct: 189 PAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAP-------------- 234
Query: 179 RPLPKPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLS 238
+ + PP +G+A+PP AAP +P +P P P P P +L+
Sbjct: 235 GTVIQTPPF---VGAAAPPAPAAP-----SPPAAPAPAAPAAAPPPPP-----PAPATLA 281
Query: 239 RGGEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPG 298
R P PAGP A AA Q GG G
Sbjct: 282 R----------------------------PPGHPAGPPTAAPAVPPPAAAQ---NGGSAG 310
Query: 299 VSPREGAQGEGVRGGVTPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEV 358
+P A G GV+ + + P+P + +P R + AA P +A
Sbjct: 311 AAPAP-APAAGGPAGVSGQPGPGAAAAAPAPGV-KAESPKRVVQAAPPAAQTLAASGPAS 368
Query: 359 PGGHTASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHYLDRESGLGSVNSHPSRSP 414
PT + PS P +P T T + G+V SR+P
Sbjct: 369 TAASMVIGPTMQ------GALPSPAAVPPPAPGTPTGL--PKGAAGAVTQSLSRTP 416
Score = 53.5 bits (127), Expect = 4e-07
Identities = 64/216 (29%), Positives = 81/216 (37%), Gaps = 35/216 (16%)
Query: 9 PHPRTPAPGCPEVAPQPEGTDA-PGPAVCSPTARAPPPILPA---PQRPPTRAREWEGAA 64
P P+ APG P G A P PA SP A AP P PA P PP A
Sbjct: 227 PLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPA-APAPAAPAAAPPPPPPAPATLARPPG 285
Query: 65 WAAGATGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGP---RRRRA 121
AG A+ ++ G A+P PAP A G G +PGP A
Sbjct: 286 HPAGPPTAAPAVPPPAAAQNGGSA-----GAAPAPAPAAGGPAGVSG-QPGPGAAAAAPA 339
Query: 122 PSSAGKRPAAAARAAPPRQRSLARCLPRSVGS--CVRPSVGPSLPRRHCRRHCRCHCRRR 179
P + P +AAPP ++LA P S + + P++ +LP
Sbjct: 340 PGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALP--------------S 385
Query: 180 PLPKPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFP 215
P PPP +P L AG+ SLS P
Sbjct: 386 PAAVPPP-----APGTPTGLPKGAAGAVTQSLSRTP 416
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 64.7 bits (156), Expect = 2e-10
Identities = 116/463 (25%), Positives = 161/463 (34%), Gaps = 88/463 (19%)
Query: 13 TPAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPILPAPQRPPTRAREWEGAAWAAGAT-- 70
TPAP +P P+G AP P +P + P P+P+ PT + AT
Sbjct: 924 TPAPKGIPASPSPKG--APTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPS 981
Query: 71 --GVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRAPSSAGKR 128
G A P S + G + + A PA P +GS P P+ P +A
Sbjct: 982 PKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPP 1041
Query: 129 PAAAARAAPPRQRSL----ARCLPRSVGSCVRPSV----------------GPSLPRRHC 168
+ AA P + A LP G PS+ GP+ P
Sbjct: 1042 SPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATP---- 1097
Query: 169 RRHCRCHCRRRPLPKPP---PLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERS 225
+ P PP P P+ G A+PP AP + P P P+
Sbjct: 1098 --------SPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATP---PSPK--------- 1137
Query: 226 PAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAA---PGRAG 282
G P P+ + G +G A +PP P G A P A
Sbjct: 1138 -GGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPA-ATPPSPKGGLATPSPKGAP 1195
Query: 283 ERRAARQWRKRGGGPGVSPR-----EGAQGEGVRGGV-TPRARGSSTCLRPSPATWQGGA 336
AA +GG SP+ A +GG+ TP +G+ T +P + +GG
Sbjct: 1196 TTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGP 1255
Query: 337 PYRAIFAAGPRLSAPSAEAEEVP---GG------HTASNP-TYEPLSSRRTKAPSEGRDS 386
A P AP+ A P GG A NP P S + A S + +
Sbjct: 1256 ------ATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGA 1309
Query: 387 PSSPATSTHYLDRESGLGSVNSHPSR---SPYNWSPPSPSVPP 426
P+ PA + S GS + P + +P +PPSP P
Sbjct: 1310 PTPPAATP-----PSPKGSPGTPPPKGAPTPPAVTPPSPKGTP 1347
Score = 61.6 bits (148), Expect = 1e-09
Identities = 101/441 (22%), Positives = 149/441 (33%), Gaps = 67/441 (15%)
Query: 13 TPAPGCPEVAPQPEGTDAPGP-AVCSPTARAPPPI---LPAPQRPPTRAREWEGAAWAAG 68
+P P P+ AP P P V P P P LP P+ P + A +
Sbjct: 855 SPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMT 914
Query: 69 ATGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRAPSSAGKR 128
++ A A P + + P SP AP P A P + P++ +
Sbjct: 915 SSSPKKAR-ATPAPKGIPASP------SPKGAPTPPAATP-------PSPKGGPATPSPK 960
Query: 129 PAAAARAAPPRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQ 188
A AA P P G+ P+ P P PK P
Sbjct: 961 WAPTPPAATPPSPKGGPATPSPKGAPTPPAATP------------------PSPKGGPAT 1002
Query: 189 PRLGSASPPRLAAPLAGSRAPSLSPFPRRCRR-RAERSPAGHGLPLPRSLSRGGEVVGAR 247
P A P P + +P+ +PFP+ A P+ G P L +G A
Sbjct: 1003 PSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAA 1062
Query: 248 R----RRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERR--AARQWRKRGG-----G 296
+ G ++G A P GPA P G AA +GG
Sbjct: 1063 TLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPH 1122
Query: 297 PGVSPREGAQGEGVRGGV-TPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSAEA 355
G A +GG+ TP +G+ T +P + +GG A P AP+ A
Sbjct: 1123 KGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGG------LATPPPKGAPTTPA 1176
Query: 356 EEVP---GGHTASNPTYEPLSSRRTKAPSEG-------RDSPSSPATSTHYLDRESGLGS 405
P GG +P P + T +G + +P++PA + + GL +
Sbjct: 1177 ATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPP--SPKGGLAT 1234
Query: 406 VNSHPSRSPYNWSPPSPSVPP 426
+ + + +PPSP P
Sbjct: 1235 PSPKGAPTTPAATPPSPKGGP 1255
Score = 58.5 bits (140), Expect = 1e-08
Identities = 110/476 (23%), Positives = 155/476 (32%), Gaps = 69/476 (14%)
Query: 3 RGQRFTPHPR---------TPAPGCPEVAPQPEGTDAP----------GPAVCSPTARAP 43
+G TP P+ P+P P P+G P GPA SP
Sbjct: 951 KGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPT 1010
Query: 44 PPIL--PAPQRPPTRAREWEGAAWAAGATGVGAALLALPGSRRLGR-VPLTFREASPGP- 99
PP + P+P+ P +GA+ AT P + L + P T P P
Sbjct: 1011 PPAVTPPSPKGSPAATPFPKGASTPPAATPPSPK--GSPAATPLPKGAPTTPAATLPSPK 1068
Query: 100 -APGAPRARGS----CGREPGPRRRRAPSSAGKRPAAAARAAPPRQRSLARCLPRSVGSC 154
P P +G+ P P+ A S P A P + LA P G+
Sbjct: 1069 GGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLA--TPPHKGAP 1126
Query: 155 VRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRLAAPLAGSRAPS---- 210
P+ P P+ P PP P+ G A+PP AP + P
Sbjct: 1127 TTPAATPPSPKGGLATPPPKGAPTTPAATPP--SPKGGLATPPPKGAPTTPAATPPSPKG 1184
Query: 211 --LSPFPRRCRRRAERSP----AGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGC 264
+P P+ +P G P P+ + G +G
Sbjct: 1185 GLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTP 1244
Query: 265 ALGSPPIPAGPAAPGRAG-ERRAARQWRKRGGGPGVSPREGAQGEGV------RGG-VTP 316
A P GPA P G A GG P +GA V +GG T
Sbjct: 1245 AATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATS 1304
Query: 317 RARGSSTCLRPSPATWQG--GAPYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEPLSS 374
+G+ T +P + +G G P P ++ PS + T + P P S
Sbjct: 1305 PPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKG-------TPTLPATTPSSK 1357
Query: 375 RRTKAPSEGRDSPSSPATSTHYLDRESGLGSVNSHPSRSPY----NWSPPSPSVPP 426
PS ++ P+ PA + + + G P R P P SP+V P
Sbjct: 1358 GGPTTPS-SKEGPTPPAATPSH---KGGPAMTPPSPKRGPAIPSPKGDPTSPAVIP 1409
Score = 57.4 bits (137), Expect = 2e-08
Identities = 109/484 (22%), Positives = 152/484 (31%), Gaps = 68/484 (14%)
Query: 3 RGQRFTPHPRTPAPGCPEVAP-----QPEGTDAPGPAVCSPTARAPPP-------ILP-- 48
+G TP P+ AP P V P P T P A P A P P LP
Sbjct: 997 KGGPATPSPKG-APTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKG 1055
Query: 49 APQRPPTRAREWEGAAWAAGATGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRARG 108
AP P +G G A P S + G + + A PA P +G
Sbjct: 1056 APTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKG 1115
Query: 109 SCGREPGPRRRRAPSSAGKRP-----------AAAARAAPPRQRSLARCLPRSVGSCVRP 157
P P++ P A AA P P G+ P
Sbjct: 1116 GLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTP 1175
Query: 158 SVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRLAAPLAGSRAPS------L 211
+ P P+ P PP P+ G A+P AP + P
Sbjct: 1176 AATPPSPKGGLATPSPKGAPTTPAATPP--SPKGGLATPSPKGAPTTPAATPPSPKGGLA 1233
Query: 212 SPFPRRCRRRAERSP----AGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALG 267
+P P+ +P G P P+ + G +G +
Sbjct: 1234 TPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVT 1293
Query: 268 SPPIPAGPA-APGRAGERRAARQWRKRGGGPGVSPREGA-----------QGEGVRGGVT 315
P GPA +P + A G PG P +GA +G T
Sbjct: 1294 PPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATT 1353
Query: 316 PRARGSSTCLRPSPATWQGGAPYRAI--FAAGPRLSAPSAE---AEEVPGGHTASNPTYE 370
P ++G T +P++ +G P A GP ++ PS + A P G S P
Sbjct: 1354 PSSKGGPT----TPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTS-PAVI 1408
Query: 371 PLSSRR---TKAPSEGRDSPSS-----PATSTHYLDRESGLGSVNSHPSRSPYNWSPPSP 422
PLS ++ T EG +PS PA + L + + P+ P P
Sbjct: 1409 PLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLP 1468
Query: 423 SVPP 426
+V P
Sbjct: 1469 AVTP 1472
Score = 51.6 bits (122), Expect = 1e-06
Identities = 105/450 (23%), Positives = 150/450 (33%), Gaps = 61/450 (13%)
Query: 3 RGQRFTPHPRTPAPGCPEVAP-QPEGTDAPGPAVCSPTARAPPPILP-----------AP 50
+G TP P+ AP P P P+G A P +PT A P P AP
Sbjct: 1137 KGGLATPPPKG-APTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAP 1195
Query: 51 QRPPTRAREWEGAAWAAGATGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRARGSC 110
P +G G A P S + G + + A PA P +G
Sbjct: 1196 TTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGP 1255
Query: 111 GREPGPRRRRAPSSAGKRPAAAARAAPPRQ--RSLARCLPRSV--GSCVRPSVGPSLPRR 166
P P+ P +A A PP + + A P S G P G P
Sbjct: 1256 ATPP-PKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTP-- 1312
Query: 167 HCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSP 226
P P P+ +PP AP P+++P SP
Sbjct: 1313 ---------------PAATPPSPKGSPGTPPPKGAP----TPPAVTP----------PSP 1343
Query: 227 AG-HGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERR 285
G LP S+GG + + + G A+ P GPA P G+
Sbjct: 1344 KGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPT 1403
Query: 286 AARQWRKRGGGPGVSP--REGAQGEGVRGGVTPRARGSSTCLRPSPAT-WQGGAPYRAIF 342
+ +P REGA +G +TP A + L+ +PAT G P
Sbjct: 1404 SPAVIPLSPKKAPATPVTREGAATPS-KGDLTPPA-VTPVSLKKAPATSAPKGGPATPSS 1461
Query: 343 AAGPRLSAPSAEAEEVPGG----HTASNPTYEPLSSRRTKAPSEGRDSPSSP--ATSTHY 396
P L A + + + P T+S+P P + AP+ PSSP +T
Sbjct: 1462 KGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPS 1521
Query: 397 LDRESGLGSVNSHPSRSPYNWSPPSPSVPP 426
R+ + ++P +P +PP
Sbjct: 1522 SRRDPIAPTATLLSKKTPATLAPKEALIPP 1551
Score = 43.1 bits (100), Expect = 5e-04
Identities = 95/452 (21%), Positives = 153/452 (33%), Gaps = 82/452 (18%)
Query: 3 RGQRFTPHPRTPAPGCPEVAP-QPEGTDAPGPAVCSPT--ARAPPPILPAPQRPPTRARE 59
+G TP P+ AP P P P+G A P +PT A PP + PP +
Sbjct: 1229 KGGLATPSPKG-APTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAP 1287
Query: 60 WEGAAWAAGATGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRARGS----CGREPG 115
G G A G+ P SP +PG P +G+ P
Sbjct: 1288 NPAVVTPPSPKG-GPATSPPKGA----PTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPS 1342
Query: 116 PR-----RRRAPSSAGKRPAAAARAAP----------------PRQRSLARCLPRSVGSC 154
P+ PSS G +++ P P +P G
Sbjct: 1343 PKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDP 1402
Query: 155 VRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRLAAPLAGSRAPSLSPF 214
P+V P P++ P+ + P G +PP + P++ +AP+ S
Sbjct: 1403 TSPAVIPLSPKK---------APATPVTREGAATPSKGDLTPPAV-TPVSLKKAPATS-- 1450
Query: 215 PRRCRRRAERSPAGHGLP-LPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGSPPIPA 273
+ +P+ G P LP + A ++ + +G+P +PA
Sbjct: 1451 ---APKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPA 1507
Query: 274 --------GPAAPGRAGERRAARQWRKRGGGPG-VSPREG---------------AQGEG 309
PA P + A P ++P+E A
Sbjct: 1508 VIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTP 1567
Query: 310 VRGGVTPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTY 369
TP ++ +S+ +P+T++ GAP P +++PS + P T +P
Sbjct: 1568 KEAPATPSSKEASSPPAVTPSTYK-GAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEK 1626
Query: 370 EPLS-------SRRTKAPSEGRDSPSSPATST 394
P + + PS +DSP+SPA+ T
Sbjct: 1627 GPATPAPKGTPTSPPVTPSSLKDSPTSPASVT 1658
Score = 33.9 bits (76), Expect = 0.29
Identities = 44/214 (20%), Positives = 74/214 (34%), Gaps = 22/214 (10%)
Query: 19 PEVAPQPEGTDAPGPAVCSPTARAPPPILPAPQRPPT------RAREWEGAAWAAGATGV 72
P P +AP P +P + P PAP+ PT + + + A+ +
Sbjct: 1602 PPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKM 1661
Query: 73 GAALLALPGSRRLGRVPLTFREASPGPAPGA-----------PRARGSCGREPGPRRRRA 121
GA + + P +E PAP + P+ + S P +
Sbjct: 1662 GATVPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPS 1721
Query: 122 PSSAGKRPAAAARAAP--PRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRR 179
+ K P + AP P Q+ ++ + + P + P +
Sbjct: 1722 AKNGSKGPLSTVAPAPLLPVQKDSSK-TAKGKDASHSPKGPLAPPESKASTPLTAAAFEK 1780
Query: 180 PLPKPPPLQPRLGSASPPRLAAPLAGSRAPSLSP 213
LPKP + +A P ++ PLA S P+L P
Sbjct: 1781 VLPKPE--SASVSAAPSPPVSLPLAPSPVPTLPP 1812
Score = 32.7 bits (73), Expect = 0.64
Identities = 59/219 (26%), Positives = 81/219 (36%), Gaps = 37/219 (16%)
Query: 16 PGCPEVAPQPEGTDAPGP---------AVCSPTARAPPPILPAPQRPPTRAREWEGAAWA 66
P + PQP+ A P A+ P PPP PAPQ+ P A + + +
Sbjct: 10 PATEQELPQPQAETAVLPMSSALSVTAALGQPGPTLPPPCSPAPQQCPLSAAN-QASPFP 68
Query: 67 AGATGVGAAL-LALPGSRRLGRVPL-------TFREASPGPAPGAPRARGSCGREPGPRR 118
+ +T L + P S +PL TF GP P +P A P
Sbjct: 69 SPSTIASTPLEVPFPQSSSGTALPLGTAPEAPTFLPNLIGP-PISPAALALASPMIAPTL 127
Query: 119 RRAPSSAGKRPAAAARAAPPR-QRSLA-----RCLPRSV-----GSCVRPS--VGPSLPR 165
+ PSS+ P A AP Q+S A P SV GS + S + PS P+
Sbjct: 128 KGTPSSSA--PLALVALAPHSVQKSSAFPPNLLTSPPSVAVAESGSVITLSAPIAPSEPK 185
Query: 166 RHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRLAAPLA 204
+ + P PK P P + S P P+A
Sbjct: 186 TNLN---KVPSEVVPNPKGTPSPPCIVSTVPYHCVTPMA 221
Score = 28.9 bits (63), Expect = 9.3
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Query: 20 EVAPQPEGTD---APGPAVCSPTARAPPPILPAPQR 52
+V P+PE AP P V P A +P P LP Q+
Sbjct: 1780 KVLPKPESASVSAAPSPPVSLPLAPSPVPTLPPKQQ 1815
>gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo
sapiens]
Length = 355
Score = 63.9 bits (154), Expect = 3e-10
Identities = 91/289 (31%), Positives = 104/289 (35%), Gaps = 42/289 (14%)
Query: 12 RTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPILPAPQRPP--TRAREWEGAAWAAGA 69
R P+P P PQP PG A +P LPA P T A G + AGA
Sbjct: 73 RGPSPAHPWTTPQPGPPHQPG----FNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGA 128
Query: 70 --TGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRAPSSAGK 127
+ G L + RVP R P GA SCG PGP R A G
Sbjct: 129 GNSRAGGGLTKYNSAHSSSRVP---RPRLPSQRRGA-----SCGLGPGPESRAARQGLGG 180
Query: 128 RPA-AAARAAPPRQR-----------SLARCLPRSVGSCVRPSVGPSL--PRRHCR-RHC 172
R A A R P R R A LP + G G + P RH R
Sbjct: 181 RSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSV 240
Query: 173 RCHCRRRPLPKPPPLQPRLGSASPPRLAAPLAGSRA-PSLSPFP-RRCRRRAERS--PAG 228
R L PP + RL S PL A P+LSP RRCR +S PA
Sbjct: 241 AAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRRCRVNWNQSSRPAS 300
Query: 229 HGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAA 277
H + R + +R R G R RR G G P P PAA
Sbjct: 301 H------NAQRAARHIPSRPRASGLRARA-ARRPGLDPGPAPYPLTPAA 342
Score = 38.1 bits (87), Expect = 0.015
Identities = 60/248 (24%), Positives = 78/248 (31%), Gaps = 52/248 (20%)
Query: 182 PKP-PPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRG 240
P+P PP QP AS PRL P A S + + PR G G P +
Sbjct: 84 PQPGPPHQPGFNPASSPRLPLP-ADSEPDAYTSAPR-----------GSG---PTYCAGA 128
Query: 241 GEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVS 300
G R GG + + P +P+ +RR A G GPG
Sbjct: 129 GN-----SRAGGGLTKYNSAHSSSRVPRPRLPS---------QRRGA----SCGLGPGPE 170
Query: 301 PREGAQGEGVRGGVTPRARGSSTCLRPSPATWQGGAPYRAIF--AAGPRLSAPSAEAEEV 358
R QG G R RG RP P GA G +A + A
Sbjct: 171 SRAARQGLGGRSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARG 230
Query: 359 PGGHTASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHYLDRESGLGSVNSHPSRSPYNWS 418
P H ++R GR SP +S +R P +
Sbjct: 231 PARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSL----------------ARPPLRFP 274
Query: 419 PPSPSVPP 426
P P++ P
Sbjct: 275 PARPALSP 282
>gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo
sapiens]
Length = 355
Score = 63.9 bits (154), Expect = 3e-10
Identities = 91/289 (31%), Positives = 104/289 (35%), Gaps = 42/289 (14%)
Query: 12 RTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPILPAPQRPP--TRAREWEGAAWAAGA 69
R P+P P PQP PG A +P LPA P T A G + AGA
Sbjct: 73 RGPSPAHPWTTPQPGPPHQPG----FNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGA 128
Query: 70 --TGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRAPSSAGK 127
+ G L + RVP R P GA SCG PGP R A G
Sbjct: 129 GNSRAGGGLTKYNSAHSSSRVP---RPRLPSQRRGA-----SCGLGPGPESRAARQGLGG 180
Query: 128 RPA-AAARAAPPRQR-----------SLARCLPRSVGSCVRPSVGPSL--PRRHCR-RHC 172
R A A R P R R A LP + G G + P RH R
Sbjct: 181 RSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSV 240
Query: 173 RCHCRRRPLPKPPPLQPRLGSASPPRLAAPLAGSRA-PSLSPFP-RRCRRRAERS--PAG 228
R L PP + RL S PL A P+LSP RRCR +S PA
Sbjct: 241 AAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRRCRVNWNQSSRPAS 300
Query: 229 HGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAA 277
H + R + +R R G R RR G G P P PAA
Sbjct: 301 H------NAQRAARHIPSRPRASGLRARA-ARRPGLDPGPAPYPLTPAA 342
Score = 38.1 bits (87), Expect = 0.015
Identities = 60/248 (24%), Positives = 78/248 (31%), Gaps = 52/248 (20%)
Query: 182 PKP-PPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRG 240
P+P PP QP AS PRL P A S + + PR G G P +
Sbjct: 84 PQPGPPHQPGFNPASSPRLPLP-ADSEPDAYTSAPR-----------GSG---PTYCAGA 128
Query: 241 GEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVS 300
G R GG + + P +P+ +RR A G GPG
Sbjct: 129 GN-----SRAGGGLTKYNSAHSSSRVPRPRLPS---------QRRGA----SCGLGPGPE 170
Query: 301 PREGAQGEGVRGGVTPRARGSSTCLRPSPATWQGGAPYRAIF--AAGPRLSAPSAEAEEV 358
R QG G R RG RP P GA G +A + A
Sbjct: 171 SRAARQGLGGRSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARG 230
Query: 359 PGGHTASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHYLDRESGLGSVNSHPSRSPYNWS 418
P H ++R GR SP +S +R P +
Sbjct: 231 PARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSL----------------ARPPLRFP 274
Query: 419 PPSPSVPP 426
P P++ P
Sbjct: 275 PARPALSP 282
>gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo
sapiens]
Length = 355
Score = 63.9 bits (154), Expect = 3e-10
Identities = 91/289 (31%), Positives = 104/289 (35%), Gaps = 42/289 (14%)
Query: 12 RTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPILPAPQRPP--TRAREWEGAAWAAGA 69
R P+P P PQP PG A +P LPA P T A G + AGA
Sbjct: 73 RGPSPAHPWTTPQPGPPHQPG----FNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGA 128
Query: 70 --TGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRAPSSAGK 127
+ G L + RVP R P GA SCG PGP R A G
Sbjct: 129 GNSRAGGGLTKYNSAHSSSRVP---RPRLPSQRRGA-----SCGLGPGPESRAARQGLGG 180
Query: 128 RPA-AAARAAPPRQR-----------SLARCLPRSVGSCVRPSVGPSL--PRRHCR-RHC 172
R A A R P R R A LP + G G + P RH R
Sbjct: 181 RSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSV 240
Query: 173 RCHCRRRPLPKPPPLQPRLGSASPPRLAAPLAGSRA-PSLSPFP-RRCRRRAERS--PAG 228
R L PP + RL S PL A P+LSP RRCR +S PA
Sbjct: 241 AAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRRCRVNWNQSSRPAS 300
Query: 229 HGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAA 277
H + R + +R R G R RR G G P P PAA
Sbjct: 301 H------NAQRAARHIPSRPRASGLRARA-ARRPGLDPGPAPYPLTPAA 342
Score = 38.1 bits (87), Expect = 0.015
Identities = 60/248 (24%), Positives = 78/248 (31%), Gaps = 52/248 (20%)
Query: 182 PKP-PPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRG 240
P+P PP QP AS PRL P A S + + PR G G P +
Sbjct: 84 PQPGPPHQPGFNPASSPRLPLP-ADSEPDAYTSAPR-----------GSG---PTYCAGA 128
Query: 241 GEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVS 300
G R GG + + P +P+ +RR A G GPG
Sbjct: 129 GN-----SRAGGGLTKYNSAHSSSRVPRPRLPS---------QRRGA----SCGLGPGPE 170
Query: 301 PREGAQGEGVRGGVTPRARGSSTCLRPSPATWQGGAPYRAIF--AAGPRLSAPSAEAEEV 358
R QG G R RG RP P GA G +A + A
Sbjct: 171 SRAARQGLGGRSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARG 230
Query: 359 PGGHTASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHYLDRESGLGSVNSHPSRSPYNWS 418
P H ++R GR SP +S +R P +
Sbjct: 231 PARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSL----------------ARPPLRFP 274
Query: 419 PPSPSVPP 426
P P++ P
Sbjct: 275 PARPALSP 282
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 62.8 bits (151), Expect = 6e-10
Identities = 102/428 (23%), Positives = 143/428 (33%), Gaps = 68/428 (15%)
Query: 24 QPEGTDAPGPAVCSPTARAPPPILPAPQRPPTRAREWEGAAWAAGATGVGAALLALPGS- 82
+P P P +P R PPP R P R R A+ + ++ ++ P
Sbjct: 314 RPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKK 373
Query: 83 --RRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAARAAPPRQ 140
+R P R SP +P PRRR PS P + P+Q
Sbjct: 374 PPKRTSSPPRKTRRLSPSASP--------------PRRRHRPSPPATPPPKTRHSPTPQQ 419
Query: 141 RSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRLA 200
+ R R SV P +H R P P P P + L + +
Sbjct: 420 SNRTR--------KSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDK-- 469
Query: 201 APLAGSRAPSLSPFPRR-CRRRAERSPAGHGLPL-------PRSLSRGGEVVGARR---- 248
G A + S RR RR+ ++S + G RS + GEV RR
Sbjct: 470 ---GGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPS 526
Query: 249 -------RRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSP 301
R+ +E RGRR+ P +P RR R P P
Sbjct: 527 RSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPP 586
Query: 302 REGAQGEGVRGGVTPRARGSSTCLRPSPATWQGGAPYRAIFAAGP---RLSAPSAEAEEV 358
R R +PR R SP+ P R + P R ++PS +
Sbjct: 587 R--------RRSPSPRRYSPPIQRRYSPSP----PPKRRTASPPPPPKRRASPSPPPKRR 634
Query: 359 PGGHTASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHYLDRESGLGSVNSHPSRSPYNWS 418
P++ RR+ + S SSP+ ST RE+ N S SP +
Sbjct: 635 VSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRST----REARSPQPNKRHSPSPRPRA 690
Query: 419 PPSPSVPP 426
P + S PP
Sbjct: 691 PQTSSSPP 698
Score = 62.0 bits (149), Expect = 1e-09
Identities = 81/312 (25%), Positives = 101/312 (32%), Gaps = 49/312 (15%)
Query: 3 RGQRFTPHPRTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPILPAPQRPPTRAREWEG 62
R +R P T P AP P P PPP P PP R
Sbjct: 545 RRRRSPSPPPTRRRRSPSPAPPPRRRRTP----------TPPPRRRTPSPPPRRRS---- 590
Query: 63 AAWAAGATGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRAP 122
P RR P R SP P P R + P P+RR +P
Sbjct: 591 -----------------PSPRRYS--PPIQRRYSPSPPP----KRRTASPPPPPKRRASP 627
Query: 123 SSAGKRPAAAARAAPPRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLP 182
S KR + + PP+QRS RS + G S P R R +R P
Sbjct: 628 SPPPKR--RVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSS-PSRSTREARSPQPNKRHSP 684
Query: 183 KPPPLQPRLGSASPP-RLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGG 241
P P P+ S+ PP R A + R S SP R RR + P P+ + +
Sbjct: 685 SPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSR-------TPEPKKIKKAA 737
Query: 242 EVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSP 301
RR R V G + A PP P P + K+ P SP
Sbjct: 738 SPSPQSVRRVSSSRSVSGSPEPAA-KKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSP 796
Query: 302 REGAQGEGVRGG 313
+ GG
Sbjct: 797 SPPRNSDQEGGG 808
Score = 60.5 bits (145), Expect = 3e-09
Identities = 79/296 (26%), Positives = 109/296 (36%), Gaps = 35/296 (11%)
Query: 80 PGSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAARAAPPR 139
P R+ P R SP P P R R S P PRRRR P+ +R + PPR
Sbjct: 533 PRKRQKETSPRGRRRRSPSPPP--TRRRRSPSPAPPPRRRRTPTPPPRRRTPSP---PPR 587
Query: 140 QRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRL 199
+RS + PR ++ PS P + +RR P PPP + S P +
Sbjct: 588 RRSPS---PRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQR 644
Query: 200 AAPLAGSRAPSLS------PFPRRCRRRAERSPAGH----GLPLPRSLSRGGEVVGARRR 249
++P+ R+PSLS P R R A RSP + P PR+ RR
Sbjct: 645 SSPVTKRRSPSLSSKHRKGSSPSRSTREA-RSPQPNKRHSPSPRPRAPQTSSSPPPVRRG 703
Query: 250 RGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQGEG 309
+ RRQ + + PI R ++ +K S R +
Sbjct: 704 ASSSPQ----RRQSPSPSTRPI-------RRVSRTPEPKKIKKAASPSPQSVRRVSSSRS 752
Query: 310 VRGGVTPRARGSSTCLRP----SPAT-WQGGAPYRAIFAAGPRLSAPSAEAEEVPG 360
V G P A+ P SP+T W P + + P S P +E G
Sbjct: 753 VSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEGGG 808
Score = 51.6 bits (122), Expect = 1e-06
Identities = 80/312 (25%), Positives = 115/312 (36%), Gaps = 42/312 (13%)
Query: 113 EPGPRRRRAPS-SAGKRPAAAARAAPPRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRH 171
E G RRR +PS SA P + PR R R P + R S P+ P R R
Sbjct: 516 EVGRRRRHSPSRSASPSPRKRQKETSPRGRR--RRSPSPPPTRRRRSPSPAPPPRRRRTP 573
Query: 172 CRCHCRRRPLPKP-----------PPLQPRLGSASPPR---LAAPLAGSRAPSLSPFPRR 217
RR P P P PP+Q R + PP+ + P R S SP P
Sbjct: 574 TPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPP-- 631
Query: 218 CRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRR--QGCALGSP-PIPAG 274
+RR SP P + R + R+ R R R Q SP P P
Sbjct: 632 -KRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRA 690
Query: 275 P---AAPGRAGERRAARQWRKRGGGPGVSPREGAQGEGVRGGVTPRARGSSTCLRPSPAT 331
P ++P ++ R++ P P R TP + PSP +
Sbjct: 691 PQTSSSPPPVRRGASSSPQRRQSPSPSTRPIR-------RVSRTPEPKKIKKAASPSPQS 743
Query: 332 WQGGAPYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEP-LSSRRTKAPSEGRDSPSSP 390
+ + R++ + P +A A P + + + P + ++ K+P+ SPS P
Sbjct: 744 VRRVSSSRSV-SGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPT---PSPSPP 799
Query: 391 ATSTHYLDRESG 402
S D+E G
Sbjct: 800 RNS----DQEGG 807
Score = 49.7 bits (117), Expect = 5e-06
Identities = 86/343 (25%), Positives = 107/343 (31%), Gaps = 61/343 (17%)
Query: 103 APRARGSCGREPGPRRRRAPSSAGKRPAAAARAAPPRQR----------SLARCLPRSVG 152
+PR R S R P PRRR P P +P R+R S + RS
Sbjct: 310 SPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRS 369
Query: 153 SCVRPSVGPSLPRRHCRR--HCRCHCRRRPLPKPPPLQPRLGSASPPRLAAPLAGSRAPS 210
+P S P R RR RRR P PP P SP + S
Sbjct: 370 PPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVS 429
Query: 211 LSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGSPP 270
+SP + + P P R E+ + +GG+
Sbjct: 430 VSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGK----------------- 472
Query: 271 IPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQGEGVRGGVTPRAR--GSSTCLRPS 328
+ A + R RR +Q G S E + V+ G R R S PS
Sbjct: 473 MAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPS 532
Query: 329 PATWQGGAPYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEPLSSRRTKAPSEGRDSPS 388
P Q R G R +PS P S P RRT P R +PS
Sbjct: 533 PRKRQKETSPR-----GRRRRSPSPP----PTRRRRSPSPAPPPRRRRTPTPPPRRRTPS 583
Query: 389 SPATSTHYLDRESGLGSVNSHPSRSPYNWSPP-----SPSVPP 426
P S SP +SPP SPS PP
Sbjct: 584 PPP----------------RRRSPSPRRYSPPIQRRYSPSPPP 610
Score = 32.0 bits (71), Expect = 1.1
Identities = 79/366 (21%), Positives = 117/366 (31%), Gaps = 55/366 (15%)
Query: 112 REPGPRRRRAPSSAGKRPAAAAR-------AAPPRQRSLARC------LPRSVGSCVRPS 158
R PRRR++ S + +R ++ R + PR R+ +R PS
Sbjct: 168 RSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPS 227
Query: 159 V---GPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGS--------ASPPRLAAPLAGSR 207
V PS+ + P+P+P P S P + + SR
Sbjct: 228 VKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSR 287
Query: 208 APSLSPFPRRCRRR---------AERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVR 258
S SP R RRR R P+ P PR + + R R R
Sbjct: 288 TRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRR 347
Query: 259 GRRQGCAL----GSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQGEGVRGGV 314
RR +L S + P + +R ++ + R P SP
Sbjct: 348 RRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATP 407
Query: 315 TPRARGSST----------CLRPSPATWQG------GAPYRAIFAAGPR-LSAPSAEAEE 357
P+ R S T + SP G G R + P+ +E+EE
Sbjct: 408 PPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEE 467
Query: 358 VPGGHTASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHYLDRES-GLGSVNSHPSRSPYN 416
GG A+ + + R + DS SS ++ R G V SP
Sbjct: 468 DKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSR 527
Query: 417 WSPPSP 422
+ PSP
Sbjct: 528 SASPSP 533
>gi|89040432 PREDICTED: hypothetical protein [Homo sapiens]
Length = 212
Score = 62.4 bits (150), Expect = 8e-10
Identities = 65/205 (31%), Positives = 80/205 (39%), Gaps = 24/205 (11%)
Query: 32 GPAVCSPTARAPPPILPAPQRPPTRAREW------------EGAAWAAGATGVGAALLAL 79
G A+ + PP P PQ PPT+ E + + G G G+
Sbjct: 19 GAALSCTRVGSSPPSAPLPQTPPTKRPERFRLHSPRAPGSAQPISAPEGRGGAGSRSRYC 78
Query: 80 PGSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAARAAPPR 139
G +L A+ G G C E RR P A RP AA+ AA R
Sbjct: 79 HGDGKLAA-------AAAGTVGPRWLPAGQCLSEAERPRRPEPGGARSRPVAASPAASSR 131
Query: 140 QRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRL 199
RS P + GS V P++ PSLP R R RP P+P PL +G+ PR
Sbjct: 132 ARSRPESSPGAPGSSV-PALLPSLPPLAAPRPLSARPRLRP-PQPQPLALTVGNG--PR- 186
Query: 200 AAPLAGSRAPSLSPFPRRCRRRAER 224
A P GSR P S R R ER
Sbjct: 187 APPAGGSRQPRGSVRGPRARAAEER 211
Score = 33.5 bits (75), Expect = 0.38
Identities = 38/133 (28%), Positives = 47/133 (35%), Gaps = 28/133 (21%)
Query: 261 RQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQGEGVR--------- 311
R G + S P+P P P + ER R G +S EG G G R
Sbjct: 26 RVGSSPPSAPLPQTP--PTKRPERFRLHSPRAPGSAQPISAPEGRGGAGSRSRYCHGDGK 83
Query: 312 ------GGVTPRARGSSTCL-------RPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEV 358
G V PR + CL RP P GGA R + A+ S + E
Sbjct: 84 LAAAAAGTVGPRWLPAGQCLSEAERPRRPEP----GGARSRPVAASPAASSRARSRPESS 139
Query: 359 PGGHTASNPTYEP 371
PG +S P P
Sbjct: 140 PGAPGSSVPALLP 152
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 61.2 bits (147), Expect = 2e-09
Identities = 106/442 (23%), Positives = 146/442 (33%), Gaps = 107/442 (24%)
Query: 12 RTPAPGCPEV-APQPEGTDAPGPAVCSPTARAPPPILPAPQRPPTRAREWEGAAWAAGAT 70
RTPA P + P+P G+ P PPP+ PA R A A A
Sbjct: 15 RTPAARAPGLLTPRPPGSPRP-----------PPPVTPAALRVLGAAGAVGRKPLAERAG 63
Query: 71 GVGAALLAL----------------------PGSRRLGRVPLTFREASPGPAPGAPRARG 108
G+G A + P S R R P + SPGP RA G
Sbjct: 64 GIGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPA-KNTSPGPVSSPGRASG 122
Query: 109 SCGREPGPRRRRAPSSAGKRPAAAARAAP-PRQRSLARCLPRSVGSCVRPSVGPSLPRRH 167
+ PGP ++ + + A +A P++ +L+ R + P++ RR
Sbjct: 123 TT--RPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRS 180
Query: 168 CRRHCRCHCRRRPLPKPPP-LQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSP 226
R LP+P P +PR + P + + + SP RR R
Sbjct: 181 -----RAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARR------RPS 229
Query: 227 AGHGL--PLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGER 284
AG GL P RSLS + + R G R G+P PA P+ P G
Sbjct: 230 AGGGLQRPASRSLSSSATPLSSPARSGPSAR-----------GTPRAPAHPSQPKPKG-L 277
Query: 285 RAARQWRKRGGGPGVSPREGAQGEGVRGGVTPRARGSSTCLRPSPATWQGGAPYRAIFAA 344
+A R + +P G +P S T RP P P A
Sbjct: 278 QALRPPQVTPPRKDAAPALGPLSSSPLATPSP----SGTKARPVPPPDNAATPLPATLPP 333
Query: 345 GPRLSAPSAEAEEVPGGHTASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHYLDRESGLG 404
P L+ P PL+ AP + PS PAT
Sbjct: 334 SPPLATPL------------------PLAPPSPSAPPSLQTLPSPPAT------------ 363
Query: 405 SVNSHPSRSPYNWSPPSPSVPP 426
P + +PPS + PP
Sbjct: 364 ---------PPSQAPPSMTTPP 376
Score = 55.8 bits (133), Expect = 7e-08
Identities = 106/409 (25%), Positives = 147/409 (35%), Gaps = 81/409 (19%)
Query: 32 GPAVCSPTARAPPPILPAPQ---RPPTRAREWEGAAWAAGATGVGAALLALPGSRRLGRV 88
G A +P ARAP + P P RPP AAL L + +GR
Sbjct: 11 GAAARTPAARAPGLLTPRPPGSPRPPPPVTP--------------AALRVLGAAGAVGRK 56
Query: 89 PLTFREASPGPAP---GAPRARGSCGREPGPRRRRAPSSAG--KRPAAAARA--APPRQR 141
PL R G A APRA GP R SS RP A+ R APP +
Sbjct: 57 PLAERAGGIGGATIPESAPRA--------GPTRSAGTSSRNPASRPPASGRGERAPPAKN 108
Query: 142 SLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRR---RPLPKPPPLQPRLGSASPPR 198
+ P V S R S G + P ++ R R P + L + +
Sbjct: 109 TS----PGPVSSPGRAS-GTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRD 163
Query: 199 LAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVR 258
+ P G+ +P+++ RR+ + GLP P +R R G + V
Sbjct: 164 TSGPTPGTPSPAMA-------RRSRAAGTEVGLPRPAPSAR------PRPPTEGPRKSVS 210
Query: 259 GRRQGCALGSPPIPAGPAAPGRAGE-RRAARQWRKRGGGPGVSPREGAQGEGVRGGVTPR 317
+ + P PA P G +R A + P SP G RG TPR
Sbjct: 211 SASEHST--TEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARS--GPSARG--TPR 264
Query: 318 ARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEPLSSRRT 377
A + +P P Q P P+++ P +A G +S+P P S
Sbjct: 265 APAHPS--QPKPKGLQALRP--------PQVTPPRKDAAPALGP-LSSSPLATPSPSGTK 313
Query: 378 KAPSEGRDSPSSPATSTHYLDRESGLGSVNSHPSRSPYNWSPPSPSVPP 426
P D+ ++P +T S P +P +PPSPS PP
Sbjct: 314 ARPVPPPDNAATPLPAT----------LPPSPPLATPLPLAPPSPSAPP 352
Score = 47.4 bits (111), Expect = 3e-05
Identities = 100/424 (23%), Positives = 125/424 (29%), Gaps = 85/424 (20%)
Query: 7 FTPHPRTP--APGCPEVAPQPEGTDAPGPAVCSPTARAPPPILPAPQRPPTRAREWEGAA 64
F+P P P AP P +P P A P+ P+ APP L P PP
Sbjct: 665 FSPPPSPPVQAPFSPPASP-PVSPSATPPSQAPPSLAAPP--LQVPPSPPAS-------- 713
Query: 65 WAAGATGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRAPSS 124
P A+P P P A P + PS
Sbjct: 714 ------------------------PPMSPSATPPPQAPPPLA--------APPLQVPPSP 741
Query: 125 AGKRPAAAARAAPPRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKP 184
P + + PPR L P V PS SLP PL KP
Sbjct: 742 PASPPMSPSATPPPRVPPLLAAPPLQ----VPPSPPASLP-------------MSPLAKP 784
Query: 185 PPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCR----------RRAERSPAGHGLPLP 234
PP P A+PP A P + P +PF +A A L +P
Sbjct: 785 PPQAPP-ALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVP 843
Query: 235 RSLSRGGEVVGARR-RRGGEERRVRGRRQGCAL--GSPPIPAGPAAPGRAGERRAARQWR 291
S + RR G + V G R AL G PP P+ + +G A
Sbjct: 844 PSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGH--- 900
Query: 292 KRGGGPGVSPREGAQG--EGVRGGVTPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLS 349
S E +G G GG + PA W G F P
Sbjct: 901 ---SSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAP 957
Query: 350 APSAEAEEVPGGHTASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHYLDRESGLGSVNSH 409
P A PG YE D SP TS +G G+ +
Sbjct: 958 LPWPPATG-PGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRS 1016
Query: 410 PSRS 413
P ++
Sbjct: 1017 PKQA 1020
Score = 46.2 bits (108), Expect = 6e-05
Identities = 64/226 (28%), Positives = 76/226 (33%), Gaps = 26/226 (11%)
Query: 8 TPH---PRTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPILPAPQRPPTRAREWEGAA 64
TPH P PAP CP AP P P P S A PP PA PP + +
Sbjct: 555 TPHLETPPCPAP-CPLQAP-PSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLS 612
Query: 65 WAAGATGVGAALLALPGSRRLGRVPLTFREASP------GPAPGAPRA------RGSCGR 112
A LALP + P ASP P+P AP A +
Sbjct: 613 PLATPPPQAPPXLALPPLQAPPSPP-----ASPPLSPLATPSPQAPNALAVHLLQAPFSP 667
Query: 113 EPGPRRRRAPSSAGKRPAAAARAAPPRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHC 172
P P +AP S P + A PP Q + P P+ P P
Sbjct: 668 PPSP-PVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQA 726
Query: 173 RCHCRRRPL---PKPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFP 215
PL P PP P SA+PP PL + + P P
Sbjct: 727 PPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSP 772
Score = 41.6 bits (96), Expect = 0.001
Identities = 92/437 (21%), Positives = 139/437 (31%), Gaps = 76/437 (17%)
Query: 8 TPHPRTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPILPAPQRPPTRAREWEGAAWAA 67
TP P T P P P P +P T +PP P+ P +
Sbjct: 325 TPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQ 384
Query: 68 GATGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRARGSCG-REPGPRRRRAPSSAG 126
+ S + PL + G+P + + PR+ +A ++
Sbjct: 385 TIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSP 444
Query: 127 KRPAAAARAAPPRQRSLARCLPRSVGSCVRPSVGP-----SLPRRHCRRHCRCHCRRRPL 181
RPA+ +PP Q L+ + + + P+V P ++ H + PL
Sbjct: 445 SRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPL 504
Query: 182 PK--PPPLQPRLGSASPPRLAAPLAG------SRAPSLSPFPRRCRRRAERSPAGHGLPL 233
PPL+ + S +PP L P A PSL+P P + +P P
Sbjct: 505 SSLIMPPLETQ-SSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPC 563
Query: 234 PRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKR 293
P C L +PP P P
Sbjct: 564 PAP---------------------------CPLQAPPSPLTTPPPETPSSIATP------ 590
Query: 294 GGGPGVSPREGAQGEGVRGGVTPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSA 353
P +P A +P +G PSP P A P L+ P
Sbjct: 591 ---PPQAPPALA---------SPPLQGL-----PSPPLSPLATPPPQ---APPXLALPPL 630
Query: 354 EAEEVPGGHTASNPTYEPLSSRRTKAPSEGR----DSPSSPATSTHYLDRESGLGSVNSH 409
+A P ++P PL++ +AP+ +P SP S S S
Sbjct: 631 QAPPSP----PASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVS 686
Query: 410 PSRSPYNWSPPSPSVPP 426
PS +P + +PPS + PP
Sbjct: 687 PSATPPSQAPPSLAAPP 703
>gi|169207312 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 60.5 bits (145), Expect = 3e-09
Identities = 92/303 (30%), Positives = 111/303 (36%), Gaps = 47/303 (15%)
Query: 21 VAPQPEG----TDAPG-PAVCSPTARAPPPILPAPQRPPTRAREWEGAAWAAGATGVGAA 75
V P P G + APG P A+ + P+P RPP AA +G T G
Sbjct: 117 VRPPPRGRVGLSQAPGRPLGACARAKGIRLVNPSPPRPPEPIPA--SAAVTSGLTARGPN 174
Query: 76 LLALPG-------SRRLGRVPLTFREASPGPAPGAPRA---RGSCGRE-PGPRRRRAPSS 124
A PG + R +P + + P P PR RGS G P P P
Sbjct: 175 TSATPGPQKGRGSAERTNHIPKDKQRVAAPPPPERPRVPFCRGSSGLSVPTP-----PEH 229
Query: 125 AGKRPAAAARAAP-PRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPK 183
AG R R P PR S +P + C S S P R P P+
Sbjct: 230 AGGRRKKFTRTRPLPRTSSFLSEVPSTRPLCATSS-SHSAPLPFFWSPLR-----NPSPR 283
Query: 184 PPPL--QPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPA--------GHGLPL 233
P P + RLG SPPR A GS + S P R PA G P
Sbjct: 284 PAPACGELRLGRLSPPR--ADTGGSSSGGCSG-PDSKHRTLPAPPAPTAWPAAGAPGAPN 340
Query: 234 PRSLSRG-GEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRK 292
P RG G G RR R V R+ GS P+G PGR R++ Q K
Sbjct: 341 PAESRRGPGPAQGPPSRRDEPRRVVIAARECGREGSELPPSGEETPGR---RKSPSQSCK 397
Query: 293 RGG 295
+GG
Sbjct: 398 KGG 400
Score = 43.9 bits (102), Expect = 3e-04
Identities = 75/269 (27%), Positives = 98/269 (36%), Gaps = 33/269 (12%)
Query: 187 LQPRLGSA-SPPRLAAPLAGSRAPSLS---PFPRRCRRRAERSP-AGHGL---------- 231
++PRL A S P L + R P LS RC R SP G G
Sbjct: 22 IRPRLAEALSQPTLRHSASALRPPRLSRGKDLKPRCGRGPAHSPDPGEGCEAWRRLSADR 81
Query: 232 -PLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPA----APGRA-GERR 285
P P SLS + A ++ R+ + R G P P G APGR G
Sbjct: 82 WPRPASLSPRAALASAPGQKPQPARQAQLPRP--VSGVRPPPRGRVGLSQAPGRPLGACA 139
Query: 286 AARQWRKRGGGPGVSPREGAQGEGVRGGVTPRARGSSTCLRPSPATWQGGAPY-RAIFAA 344
A+ R P P V G+T ARG +T P P +G A I
Sbjct: 140 RAKGIRLVNPSPPRPPEPIPASAAVTSGLT--ARGPNTSATPGPQKGRGSAERTNHIPKD 197
Query: 345 GPRLSAPSA-EAEEVP---GGHTASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHYLDRE 400
R++AP E VP G S PT + R K + R P + + +
Sbjct: 198 KQRVAAPPPPERPRVPFCRGSSGLSVPTPPEHAGGRRKKFTRTRPLPRTSSFLSEVPSTR 257
Query: 401 SGLGSVNSHPSRSPYNWSP---PSPSVPP 426
+ +SH + P+ WSP PSP P
Sbjct: 258 PLCATSSSHSAPLPFFWSPLRNPSPRPAP 286
Score = 36.2 bits (82), Expect = 0.058
Identities = 69/295 (23%), Positives = 96/295 (32%), Gaps = 74/295 (25%)
Query: 97 PGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAARAAPPRQRSLARCLPRSVGSCVR 156
P PA +PRA + PG + + A + RP + R P + L++ R +G+C R
Sbjct: 83 PRPASLSPRA--ALASAPGQKPQPARQAQLPRPVSGVRPPPRGRVGLSQAPGRPLGACAR 140
Query: 157 PS----VGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRLAAP---------- 202
V PS PR P+P + L + P A P
Sbjct: 141 AKGIRLVNPSPPR-----------PPEPIPASAAVTSGLTARGPNTSATPGPQKGRGSAE 189
Query: 203 -----LAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEER-- 255
+ + P P R R R +G +P P E G RR++ R
Sbjct: 190 RTNHIPKDKQRVAAPPPPERPRVPFCRGSSGLSVPTP------PEHAGGRRKKFTRTRPL 243
Query: 256 --------RVRGRRQGCALG---SPPIP--------AGPAAPGRAGERRAARQWRKRGGG 296
V R CA S P+P P GE R R
Sbjct: 244 PRTSSFLSEVPSTRPLCATSSSHSAPLPFFWSPLRNPSPRPAPACGELRLGR-------- 295
Query: 297 PGVSPREGAQGEGVRGGVT-PRARGSSTCLRPSPATWQG----GAPYRAIFAAGP 346
+SP G GG + P ++ + P+P W GAP A GP
Sbjct: 296 --LSPPRADTGGSSSGGCSGPDSKHRTLPAPPAPTAWPAAGAPGAPNPAESRRGP 348
Score = 28.9 bits (63), Expect = 9.3
Identities = 25/78 (32%), Positives = 28/78 (35%), Gaps = 7/78 (8%)
Query: 10 HPRTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPILPAPQRPPTRAREWEGAAWAAGA 69
H PAP P P AP PA + R P P Q PP+R E AA
Sbjct: 318 HRTLPAPPAPTAWPAAGAPGAPNPA---ESRRGPGP----AQGPPSRRDEPRRVVIAARE 370
Query: 70 TGVGAALLALPGSRRLGR 87
G + L G GR
Sbjct: 371 CGREGSELPPSGEETPGR 388
>gi|239750650 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 60.5 bits (145), Expect = 3e-09
Identities = 92/303 (30%), Positives = 111/303 (36%), Gaps = 47/303 (15%)
Query: 21 VAPQPEG----TDAPG-PAVCSPTARAPPPILPAPQRPPTRAREWEGAAWAAGATGVGAA 75
V P P G + APG P A+ + P+P RPP AA +G T G
Sbjct: 117 VRPPPRGRVGLSQAPGRPLGACARAKGIRLVNPSPPRPPEPIPA--SAAVTSGLTARGPN 174
Query: 76 LLALPG-------SRRLGRVPLTFREASPGPAPGAPRA---RGSCGRE-PGPRRRRAPSS 124
A PG + R +P + + P P PR RGS G P P P
Sbjct: 175 TSATPGPQKGRGSAERTNHIPKDKQRVAAPPPPERPRVPFCRGSSGLSVPTP-----PEH 229
Query: 125 AGKRPAAAARAAP-PRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPK 183
AG R R P PR S +P + C S S P R P P+
Sbjct: 230 AGGRRKKFTRTRPLPRTSSFLSEVPSTRPLCATSS-SHSAPLPFFWSPLR-----NPSPR 283
Query: 184 PPPL--QPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPA--------GHGLPL 233
P P + RLG SPPR A GS + S P R PA G P
Sbjct: 284 PAPACGELRLGRLSPPR--ADTGGSSSGGCSG-PDSKHRTLPAPPAPTAWPAAGAPGAPN 340
Query: 234 PRSLSRG-GEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRK 292
P RG G G RR R V R+ GS P+G PGR R++ Q K
Sbjct: 341 PAESRRGPGPAQGPPSRRDEPRRVVIAARECGREGSELPPSGEETPGR---RKSPSQSCK 397
Query: 293 RGG 295
+GG
Sbjct: 398 KGG 400
Score = 43.9 bits (102), Expect = 3e-04
Identities = 75/269 (27%), Positives = 98/269 (36%), Gaps = 33/269 (12%)
Query: 187 LQPRLGSA-SPPRLAAPLAGSRAPSLS---PFPRRCRRRAERSP-AGHGL---------- 231
++PRL A S P L + R P LS RC R SP G G
Sbjct: 22 IRPRLAEALSQPTLRHSASALRPPRLSRGKDLKPRCGRGPAHSPDPGEGCEAWRRLSADR 81
Query: 232 -PLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPA----APGRA-GERR 285
P P SLS + A ++ R+ + R G P P G APGR G
Sbjct: 82 WPRPASLSPRAALASAPGQKPQPARQAQLPRP--VSGVRPPPRGRVGLSQAPGRPLGACA 139
Query: 286 AARQWRKRGGGPGVSPREGAQGEGVRGGVTPRARGSSTCLRPSPATWQGGAPY-RAIFAA 344
A+ R P P V G+T ARG +T P P +G A I
Sbjct: 140 RAKGIRLVNPSPPRPPEPIPASAAVTSGLT--ARGPNTSATPGPQKGRGSAERTNHIPKD 197
Query: 345 GPRLSAPSA-EAEEVP---GGHTASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHYLDRE 400
R++AP E VP G S PT + R K + R P + + +
Sbjct: 198 KQRVAAPPPPERPRVPFCRGSSGLSVPTPPEHAGGRRKKFTRTRPLPRTSSFLSEVPSTR 257
Query: 401 SGLGSVNSHPSRSPYNWSP---PSPSVPP 426
+ +SH + P+ WSP PSP P
Sbjct: 258 PLCATSSSHSAPLPFFWSPLRNPSPRPAP 286
Score = 36.2 bits (82), Expect = 0.058
Identities = 69/295 (23%), Positives = 96/295 (32%), Gaps = 74/295 (25%)
Query: 97 PGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAARAAPPRQRSLARCLPRSVGSCVR 156
P PA +PRA + PG + + A + RP + R P + L++ R +G+C R
Sbjct: 83 PRPASLSPRA--ALASAPGQKPQPARQAQLPRPVSGVRPPPRGRVGLSQAPGRPLGACAR 140
Query: 157 PS----VGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRLAAP---------- 202
V PS PR P+P + L + P A P
Sbjct: 141 AKGIRLVNPSPPR-----------PPEPIPASAAVTSGLTARGPNTSATPGPQKGRGSAE 189
Query: 203 -----LAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEER-- 255
+ + P P R R R +G +P P E G RR++ R
Sbjct: 190 RTNHIPKDKQRVAAPPPPERPRVPFCRGSSGLSVPTP------PEHAGGRRKKFTRTRPL 243
Query: 256 --------RVRGRRQGCALG---SPPIP--------AGPAAPGRAGERRAARQWRKRGGG 296
V R CA S P+P P GE R R
Sbjct: 244 PRTSSFLSEVPSTRPLCATSSSHSAPLPFFWSPLRNPSPRPAPACGELRLGR-------- 295
Query: 297 PGVSPREGAQGEGVRGGVT-PRARGSSTCLRPSPATWQG----GAPYRAIFAAGP 346
+SP G GG + P ++ + P+P W GAP A GP
Sbjct: 296 --LSPPRADTGGSSSGGCSGPDSKHRTLPAPPAPTAWPAAGAPGAPNPAESRRGP 348
Score = 28.9 bits (63), Expect = 9.3
Identities = 25/78 (32%), Positives = 28/78 (35%), Gaps = 7/78 (8%)
Query: 10 HPRTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPILPAPQRPPTRAREWEGAAWAAGA 69
H PAP P P AP PA + R P P Q PP+R E AA
Sbjct: 318 HRTLPAPPAPTAWPAAGAPGAPNPA---ESRRGPGP----AQGPPSRRDEPRRVVIAARE 370
Query: 70 TGVGAALLALPGSRRLGR 87
G + L G GR
Sbjct: 371 CGREGSELPPSGEETPGR 388
>gi|89037350 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 60.5 bits (145), Expect = 3e-09
Identities = 92/303 (30%), Positives = 111/303 (36%), Gaps = 47/303 (15%)
Query: 21 VAPQPEG----TDAPG-PAVCSPTARAPPPILPAPQRPPTRAREWEGAAWAAGATGVGAA 75
V P P G + APG P A+ + P+P RPP AA +G T G
Sbjct: 117 VRPPPRGRVGLSQAPGRPLGACARAKGIRLVNPSPPRPPEPIPA--SAAVTSGLTARGPN 174
Query: 76 LLALPG-------SRRLGRVPLTFREASPGPAPGAPRA---RGSCGRE-PGPRRRRAPSS 124
A PG + R +P + + P P PR RGS G P P P
Sbjct: 175 TSATPGPQKGRGSAERTNHIPKDKQRVAAPPPPERPRVPFCRGSSGLSVPTP-----PEH 229
Query: 125 AGKRPAAAARAAP-PRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPK 183
AG R R P PR S +P + C S S P R P P+
Sbjct: 230 AGGRRKKFTRTRPLPRTSSFLSEVPSTRPLCATSS-SHSAPLPFFWSPLR-----NPSPR 283
Query: 184 PPPL--QPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPA--------GHGLPL 233
P P + RLG SPPR A GS + S P R PA G P
Sbjct: 284 PAPACGELRLGRLSPPR--ADTGGSSSGGCSG-PDSKHRTLPAPPAPTAWPAAGAPGAPN 340
Query: 234 PRSLSRG-GEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRK 292
P RG G G RR R V R+ GS P+G PGR R++ Q K
Sbjct: 341 PAESRRGPGPAQGPPSRRDEPRRVVIAARECGREGSELPPSGEETPGR---RKSPSQSCK 397
Query: 293 RGG 295
+GG
Sbjct: 398 KGG 400
Score = 43.9 bits (102), Expect = 3e-04
Identities = 75/269 (27%), Positives = 98/269 (36%), Gaps = 33/269 (12%)
Query: 187 LQPRLGSA-SPPRLAAPLAGSRAPSLS---PFPRRCRRRAERSP-AGHGL---------- 231
++PRL A S P L + R P LS RC R SP G G
Sbjct: 22 IRPRLAEALSQPTLRHSASALRPPRLSRGKDLKPRCGRGPAHSPDPGEGCEAWRRLSADR 81
Query: 232 -PLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPA----APGRA-GERR 285
P P SLS + A ++ R+ + R G P P G APGR G
Sbjct: 82 WPRPASLSPRAALASAPGQKPQPARQAQLPRP--VSGVRPPPRGRVGLSQAPGRPLGACA 139
Query: 286 AARQWRKRGGGPGVSPREGAQGEGVRGGVTPRARGSSTCLRPSPATWQGGAPY-RAIFAA 344
A+ R P P V G+T ARG +T P P +G A I
Sbjct: 140 RAKGIRLVNPSPPRPPEPIPASAAVTSGLT--ARGPNTSATPGPQKGRGSAERTNHIPKD 197
Query: 345 GPRLSAPSA-EAEEVP---GGHTASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHYLDRE 400
R++AP E VP G S PT + R K + R P + + +
Sbjct: 198 KQRVAAPPPPERPRVPFCRGSSGLSVPTPPEHAGGRRKKFTRTRPLPRTSSFLSEVPSTR 257
Query: 401 SGLGSVNSHPSRSPYNWSP---PSPSVPP 426
+ +SH + P+ WSP PSP P
Sbjct: 258 PLCATSSSHSAPLPFFWSPLRNPSPRPAP 286
Score = 36.2 bits (82), Expect = 0.058
Identities = 69/295 (23%), Positives = 96/295 (32%), Gaps = 74/295 (25%)
Query: 97 PGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAARAAPPRQRSLARCLPRSVGSCVR 156
P PA +PRA + PG + + A + RP + R P + L++ R +G+C R
Sbjct: 83 PRPASLSPRA--ALASAPGQKPQPARQAQLPRPVSGVRPPPRGRVGLSQAPGRPLGACAR 140
Query: 157 PS----VGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRLAAP---------- 202
V PS PR P+P + L + P A P
Sbjct: 141 AKGIRLVNPSPPR-----------PPEPIPASAAVTSGLTARGPNTSATPGPQKGRGSAE 189
Query: 203 -----LAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEER-- 255
+ + P P R R R +G +P P E G RR++ R
Sbjct: 190 RTNHIPKDKQRVAAPPPPERPRVPFCRGSSGLSVPTP------PEHAGGRRKKFTRTRPL 243
Query: 256 --------RVRGRRQGCALG---SPPIP--------AGPAAPGRAGERRAARQWRKRGGG 296
V R CA S P+P P GE R R
Sbjct: 244 PRTSSFLSEVPSTRPLCATSSSHSAPLPFFWSPLRNPSPRPAPACGELRLGR-------- 295
Query: 297 PGVSPREGAQGEGVRGGVT-PRARGSSTCLRPSPATWQG----GAPYRAIFAAGP 346
+SP G GG + P ++ + P+P W GAP A GP
Sbjct: 296 --LSPPRADTGGSSSGGCSGPDSKHRTLPAPPAPTAWPAAGAPGAPNPAESRRGP 348
Score = 28.9 bits (63), Expect = 9.3
Identities = 25/78 (32%), Positives = 28/78 (35%), Gaps = 7/78 (8%)
Query: 10 HPRTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPILPAPQRPPTRAREWEGAAWAAGA 69
H PAP P P AP PA + R P P Q PP+R E AA
Sbjct: 318 HRTLPAPPAPTAWPAAGAPGAPNPA---ESRRGPGP----AQGPPSRRDEPRRVVIAARE 370
Query: 70 TGVGAALLALPGSRRLGR 87
G + L G GR
Sbjct: 371 CGREGSELPPSGEETPGR 388
>gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo
sapiens]
Length = 459
Score = 58.9 bits (141), Expect = 8e-09
Identities = 97/351 (27%), Positives = 126/351 (35%), Gaps = 62/351 (17%)
Query: 43 PPPILPAPQRPPTRAREWEGAAWAAGATGVGAALLALPGSRRLGRVPLTFREASPG--PA 100
P P QR P RA G A G A +RR+ P + A+PG P+
Sbjct: 111 PAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPES-AAAAPGRSPS 169
Query: 101 PGAPRARGSCGREPGPR---------RRRAPSSAGKRPAAAARAAPP------------R 139
P P + S R P R R AP + G + ++A PP
Sbjct: 170 PADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGA 229
Query: 140 QRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRL 199
R L+R R +G PSV S R P PP P++ +A P
Sbjct: 230 PRLLSRTRQRELGGSAAPSVAFS-------GDVTLSLERGPASAKPP--PQVLTAEPRED 280
Query: 200 AAPLAGSRAPSLSPFPRRCRRRAERSPAGHG---LPLPRSLSRGGEVVGARRRRGGEERR 256
A P G R P P R R + PA G L L + RGG + RR G
Sbjct: 281 ATPGEG-RLPDFEKQPHSPRERLDPPPAPFGQMILILGFRVGRGGTGSWSWRRGAGS--- 336
Query: 257 VRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRK-----RGGGPGVSPREG---AQGE 308
GC+ + A G++ E R R+ RGGG GV+ E QG
Sbjct: 337 --AELPGCSCAQ--LAQQLARAGKSTESRNRLNGRRGGVEARGGGGGVARAERDDVLQGL 392
Query: 309 GVRGGVTPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEVP 359
G+RG C R +P T G R A G R S+ +A +P
Sbjct: 393 GLRG-------TEDWCARRAPRTSSG---VRRGAAPGFRGSSNTARRRSIP 433
Score = 35.0 bits (79), Expect = 0.13
Identities = 61/230 (26%), Positives = 73/230 (31%), Gaps = 23/230 (10%)
Query: 183 KPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGE 242
K LQP G + R AA P FP +P P P++ +
Sbjct: 62 KAAQLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPPFAPGRISPPAPQAFL--AQ 119
Query: 243 VVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSPR 302
AR GG G+R+ PA G RR PG SP
Sbjct: 120 RSPARASPGGGFTSAEGKRK----------TRPAGRGGGRTRRVVAAPESAAAAPGRSPS 169
Query: 303 EGAQGEGVRGGVTPRARGSS-TCLRPSPATWQG-GAPYRAIFAAGPRLSAPSAEAEEVPG 360
G PRAR SS L+P A GAP R+ A P AP A PG
Sbjct: 170 PADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPP-PAPRFPASRRPG 228
Query: 361 GHTASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHYLDRESGLGSVNSHP 410
L SR + G +PS + L E G S P
Sbjct: 229 A--------PRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPP 270
Score = 30.8 bits (68), Expect = 2.4
Identities = 36/126 (28%), Positives = 44/126 (34%), Gaps = 12/126 (9%)
Query: 11 PRTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPI--LPAPQRP-------PTRAREWE 61
PR + P+ DAPG S + PPP PA +RP TR RE
Sbjct: 183 PRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGAPRLLSRTRQRELG 242
Query: 62 GAAWAAGATGVGAALLALPGSRRLGRVPLTFREASP--GPAPGAPRARGSCGREPGPRRR 119
G+A A G L+L + P A P PG R + PR R
Sbjct: 243 GSA-APSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATPGEGRLPDFEKQPHSPRER 301
Query: 120 RAPSSA 125
P A
Sbjct: 302 LDPPPA 307
>gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo
sapiens]
Length = 459
Score = 58.9 bits (141), Expect = 8e-09
Identities = 97/351 (27%), Positives = 126/351 (35%), Gaps = 62/351 (17%)
Query: 43 PPPILPAPQRPPTRAREWEGAAWAAGATGVGAALLALPGSRRLGRVPLTFREASPG--PA 100
P P QR P RA G A G A +RR+ P + A+PG P+
Sbjct: 111 PAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPES-AAAAPGRSPS 169
Query: 101 PGAPRARGSCGREPGPR---------RRRAPSSAGKRPAAAARAAPP------------R 139
P P + S R P R R AP + G + ++A PP
Sbjct: 170 PADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGA 229
Query: 140 QRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRL 199
R L+R R +G PSV S R P PP P++ +A P
Sbjct: 230 PRLLSRTRQRELGGSAAPSVAFS-------GDVTLSLERGPASAKPP--PQVLTAEPRED 280
Query: 200 AAPLAGSRAPSLSPFPRRCRRRAERSPAGHG---LPLPRSLSRGGEVVGARRRRGGEERR 256
A P G R P P R R + PA G L L + RGG + RR G
Sbjct: 281 ATPGEG-RLPDFEKQPHSPRERLDPPPAPFGQMILILGFRVGRGGTGSWSWRRGAGS--- 336
Query: 257 VRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRK-----RGGGPGVSPREG---AQGE 308
GC+ + A G++ E R R+ RGGG GV+ E QG
Sbjct: 337 --AELPGCSCAQ--LAQQLARAGKSTESRNRLNGRRGGVEARGGGGGVARAERDDVLQGL 392
Query: 309 GVRGGVTPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEVP 359
G+RG C R +P T G R A G R S+ +A +P
Sbjct: 393 GLRG-------TEDWCARRAPRTSSG---VRRGAAPGFRGSSNTARRRSIP 433
Score = 36.2 bits (82), Expect = 0.058
Identities = 69/271 (25%), Positives = 86/271 (31%), Gaps = 32/271 (11%)
Query: 148 PRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKP------PPLQPRLGSASPPRLAA 201
P V ++P +G + P H C+ P P LQP G + R AA
Sbjct: 24 PVPVSGEIQPDIGQNSPLIF---HIMCNDMGTLEPTPLLRRKAAQLQPGRGKSCGARRAA 80
Query: 202 PLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRR 261
P FP +P P P++ + AR GG G+R
Sbjct: 81 LPLLRYPPEPGVFPFLVLWTPPFAPGRISPPAPQAFL--AQRSPARASPGGGFTSAEGKR 138
Query: 262 QGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQGEGVRGGVTPRARGS 321
+ PA G RR PG SP G PRAR S
Sbjct: 139 K----------TRPAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTSSATRVPRARRS 188
Query: 322 S-TCLRPSPATWQG-GAPYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEPLSSRRTKA 379
S L+P A GAP R+ A P AP A PG L SR +
Sbjct: 189 SRRALQPRHAAPDAPGAPSRSTSQATPP-PAPRFPASRRPGA--------PRLLSRTRQR 239
Query: 380 PSEGRDSPSSPATSTHYLDRESGLGSVNSHP 410
G +PS + L E G S P
Sbjct: 240 ELGGSAAPSVAFSGDVTLSLERGPASAKPPP 270
Score = 30.8 bits (68), Expect = 2.4
Identities = 36/126 (28%), Positives = 44/126 (34%), Gaps = 12/126 (9%)
Query: 11 PRTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPI--LPAPQRP-------PTRAREWE 61
PR + P+ DAPG S + PPP PA +RP TR RE
Sbjct: 183 PRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGAPRLLSRTRQRELG 242
Query: 62 GAAWAAGATGVGAALLALPGSRRLGRVPLTFREASP--GPAPGAPRARGSCGREPGPRRR 119
G+A A G L+L + P A P PG R + PR R
Sbjct: 243 GSA-APSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATPGEGRLPDFEKQPHSPRER 301
Query: 120 RAPSSA 125
P A
Sbjct: 302 LDPPPA 307
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 58.9 bits (141), Expect = 8e-09
Identities = 120/414 (28%), Positives = 145/414 (35%), Gaps = 97/414 (23%)
Query: 15 APGCPEV------------APQPEGTDAPGPAVCSPT---ARAPPPILPAPQ-------- 51
+P PEV AP P + GP CS ARA P + P+P
Sbjct: 170 SPSAPEVVGARAAVPRSFSAPYPTAGGSAGPEACSSAERRARAGPFLTPSPLHAVAMRSP 229
Query: 52 ----RPPTRAREWEGAAWAAGATGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRAR 107
RPPT + + GA G +ALL R G+ P T SPG A G PR +
Sbjct: 230 RPCGRPPTDSPDAGGAG--RPLDGYISALLRRRRRRGAGQ-PRT----SPGGADGGPRRQ 282
Query: 108 GSCGREPGPRRRRAPSSAGKRPAAAARAA-----PPRQRSLARCLPRSVGSCVRPSVGPS 162
S + P +PS RPA P +L+R S S P P+
Sbjct: 283 NSVRQRPPDA---SPSPGSARPAREPSLERVGGHPTSPAALSRAWASSWESEAAPE--PA 337
Query: 163 LPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASP-PRLAAPLAG--SRAPSLSPFPRRCR 219
P P P P + RL A P A G RA P P
Sbjct: 338 APPA------------APSPPDSPAEGRLVKAQYIPGAQAATRGLPGRAARRKPPPLTRG 385
Query: 220 RRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQG--CALG-SPPIPAGPA 276
R E+SP PR+ R G + A RRG R R Q LG + +P+GP
Sbjct: 386 RSVEQSPPRER---PRAAGRRGRMAEASGRRGSPRARKASRSQSETSLLGRASAVPSGPP 442
Query: 277 APGRAGERRAARQWRKRGGGPGVSPREGAQGEGVRGGVTPRARGSSTCLRPSPATWQGGA 336
A ER R R R G +P AQ G +C R W+ A
Sbjct: 443 KYPTA-EREEPRPPRPR---RGPAPTLAAQAAG-------------SCRR-----WRSTA 480
Query: 337 PYRAIFAAGPRLSAPSAEAEEVPG-GHTASNPTYEPLSSRRTKAPSEGRDSPSS 389
I AA R P A A VPG G + S P RR G DS S
Sbjct: 481 ---EIDAADGRRVRPRAPAARVPGPGPSPSAP------QRRLLYGCAGSDSECS 525
Score = 42.7 bits (99), Expect = 6e-04
Identities = 55/184 (29%), Positives = 70/184 (38%), Gaps = 25/184 (13%)
Query: 14 PAPGCPEVAPQPEGTDAPGPAVCS---PTARAPPPILP---APQRPP--TRAREWEGAA- 64
P P P AP P + A G V + P A+A LP A ++PP TR R E +
Sbjct: 334 PEPAAPPAAPSPPDSPAEGRLVKAQYIPGAQAATRGLPGRAARRKPPPLTRGRSVEQSPP 393
Query: 65 ----WAAGATGVGAALLALPGSRRLGRVPLTFREAS--------PGPAPGAPRARGSCGR 112
AAG G A GS R + + E S P P P A R
Sbjct: 394 RERPRAAGRRGRMAEASGRRGSPRARKASRSQSETSLLGRASAVPSGPPKYPTAEREEPR 453
Query: 113 EPGPRRRRAPSSAGKRPAAAARAAPPRQRSLA---RCLPRSVGSCV-RPSVGPSLPRRHC 168
P PRR AP+ A + + R + A R PR+ + V P PS P+R
Sbjct: 454 PPRPRRGPAPTLAAQAAGSCRRWRSTAEIDAADGRRVRPRAPAARVPGPGPSPSAPQRRL 513
Query: 169 RRHC 172
C
Sbjct: 514 LYGC 517
Score = 38.1 bits (87), Expect = 0.015
Identities = 42/152 (27%), Positives = 60/152 (39%), Gaps = 21/152 (13%)
Query: 4 GQRFTPHPRTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPILPAPQR--PPTRAREWE 61
G+R +P R + E + + P PTA P P P+R PT A +
Sbjct: 411 GRRGSPRARKASRSQSETSLLGRASAVPSGPPKYPTAEREEPRPPRPRRGPAPTLAAQAA 470
Query: 62 GAAWAAGATGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRAR---GSCGREP---- 114
G+ +T A + A G R R P R PGP+P AP+ R G G +
Sbjct: 471 GSCRRWRST---AEIDAADGRRVRPRAPAA-RVPGPGPSPSAPQRRLLYGCAGSDSECSA 526
Query: 115 ---GPRRRRAPSSA-----GKRPAAAARAAPP 138
GP RR P+ G+ ++A+ P
Sbjct: 527 GRLGPLGRRGPAGGVGGGYGESESSASEGESP 558
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 57.8 bits (138), Expect = 2e-08
Identities = 94/347 (27%), Positives = 123/347 (35%), Gaps = 53/347 (15%)
Query: 93 REASPGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAARAAPPRQRSLARCLPRSVG 152
R + G PG+ + P PR R ++A P A + +P R P S G
Sbjct: 320 RSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPS-----PRSAPSSQG 374
Query: 153 SCVRPSVGPSLPRRHCRRHCRCHC-----RRRPLPKPPPLQPRLGSASPPRLAAPL---A 204
R + G RR RR R RRR +P P PR S S R + +
Sbjct: 375 RGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGS 434
Query: 205 GSRAPSLSPFPRRCRRRAERSPAGHGL------PLPRSLSRGGEVVGARRRRGGEERRVR 258
G AP P P +ER GHG P R S GA RRGG E +
Sbjct: 435 GRGAPGPGPEP-----GSERGHGGHGKRAKERPPRARPASTSPS-PGAHGRRGGPEGKSS 488
Query: 259 GRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSP------REGAQGEGVRG 312
R G P P ++ R+ + +R KR P SP GEG
Sbjct: 489 SRSPG------PHPRSWSS-SRSPSKSRSRSAEKRPHSPSRSPSPKKPLSRDKDGEG--- 538
Query: 313 GVTPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAP----SAEAEEVPGGHTASNPT 368
RAR S + + +P R P P SA +P + + +
Sbjct: 539 ----RARHSEAEATRARRRSRSYSPIRKRRRDSPSFMEPRRITSARKRPIPYYRPSPSSS 594
Query: 369 YEPLSS-RRTKAPSEGRDSPSSPATSTHYLDRESGLGSVNSHPSRSP 414
LSS T++ S SPS + Y R G S PSR+P
Sbjct: 595 SSCLSSDYSTRSHSR---SPSPGHSHGSYSSRSHGTRSRTRSPSRTP 638
Score = 56.2 bits (134), Expect = 5e-08
Identities = 82/304 (26%), Positives = 114/304 (37%), Gaps = 46/304 (15%)
Query: 156 RPSVGPSLPRRHCRRHCRCHCR------RRPLPKPPPLQPRL---GSASPPRLAAPLAGS 206
R G RRH R +C + +RP + P + GS+ P L++ + S
Sbjct: 213 RSDSGSRRKRRHRSRSSKCKRKEKNKEKKRPHTESPGRRSHRHSSGSSHSPSLSSHYSDS 272
Query: 207 RAPS-LSPFPR-RCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERR--VRGRRQ 262
R+PS LSP R R+ + +G P P GG G+ +R GG +R G R
Sbjct: 273 RSPSRLSPKHRDEGRKTGSQRSSGSRSPSP----SGGSGWGSPQRNGGSGQRSGAHGGRP 328
Query: 263 GCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSPRE--GAQGEGVR--GGV---- 314
G A P P+ P +P + AA G SPR +QG G R GG
Sbjct: 329 GSAHSPPDKPSSP-SPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRR 387
Query: 315 --------------TPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEVPG 360
PR RG RP PA +G + R++ A + S PG
Sbjct: 388 RRRRRRRRSRSSASAPRRRGRR---RPRPAPPRGSS--RSLSRARSSSDSGSGRGAPGPG 442
Query: 361 GHTASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHYLDRESGLGSVNSHPSRSPYNWSPP 420
S + R + P R + +SP+ H S + P P +WS
Sbjct: 443 PEPGSERGHGGHGKRAKERPPRARPASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSS 502
Query: 421 -SPS 423
SPS
Sbjct: 503 RSPS 506
Score = 46.2 bits (108), Expect = 6e-05
Identities = 70/254 (27%), Positives = 86/254 (33%), Gaps = 44/254 (17%)
Query: 24 QPEGTDAPGPAVCSPTARAPPPILPAPQRPPTRAREWEGAAWAAGATGVGAALLALPGSR 83
+P +P SP+ R A PP R +E A + G G G R
Sbjct: 327 RPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRR 386
Query: 84 RLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAARAAPPR--QR 141
R R R + APR RG RR P R APPR R
Sbjct: 387 RRRR----RRRRRSRSSASAPRRRG----------RRRP-----------RPAPPRGSSR 421
Query: 142 SLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASP---PR 198
SL+R S R + GP P R H +R +PP +P S SP R
Sbjct: 422 SLSRARSSSDSGSGRGAPGPG-PEPGSERGHGGH-GKRAKERPPRARPASTSPSPGAHGR 479
Query: 199 LAAPLAGSRAPSLSPFPR-----------RCRRRAERSPAGHGLPLPRS-LSRGGEVVGA 246
P S + S P PR R R +R + P P+ LSR + G
Sbjct: 480 RGGPEGKSSSRSPGPHPRSWSSSRSPSKSRSRSAEKRPHSPSRSPSPKKPLSRDKDGEGR 539
Query: 247 RRRRGGEERRVRGR 260
R E R R R
Sbjct: 540 ARHSEAEATRARRR 553
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 57.4 bits (137), Expect = 2e-08
Identities = 101/341 (29%), Positives = 122/341 (35%), Gaps = 81/341 (23%)
Query: 27 GTDAPGPAVCSPTARAPPP---ILPAPQRPPTRAREWEGAAWAAGATGVGAALLALPGSR 83
GT +P A + + AP P PA + P R R G +G G A+P
Sbjct: 57 GTFSPESAAGTEVSGAPHPDSRTRPAARPPHPRTRS------PPGRSGSGTTFSAVPPRP 110
Query: 84 RLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAARAAPPRQRSL 143
+ R A+PGP PG AR S P P P AAAR AP R S
Sbjct: 111 SQHQSGSRLRPAAPGPRPGCSSARAS----PAP----------AAPQAAARTAPGRAAS- 155
Query: 144 ARCLPRSVGS-----CVRPS-VGPSLPRRHCRRHCRCHCRR--RPLPKPP-PLQPRLGSA 194
P S G RPS G P CRR CR RR RP +P PL+ R GS
Sbjct: 156 GGSGPGSRGQGSDQVGARPSRAGGQPPPLTCRR-CRAAPRRSARPFRRPGLPLKSRPGSG 214
Query: 195 SPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPA---GHGLPLPRSLSRGGEVV---GARR 248
+ R P + A SP+ P P + G V G RR
Sbjct: 215 TGARSCGTWGSGGGPGTA---------AASSPSADFSSDSPQPIIIFGGALRVRGCGGRR 265
Query: 249 RRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKR-----GGG------P 297
R G+ G + GC L SP AP R R++RK GGG P
Sbjct: 266 RSNGQ-----GTQPGCRLLSP-------APPR-------RRYRKPLTLSFGGGVSSPTHP 306
Query: 298 GVSPREGAQGEGVRGGVTPRARGSSTCLRPSPATWQGGAPY 338
V+PR R R T P P W+ P+
Sbjct: 307 VVAPRRHFPRSVPRFPAGFRTHSLGTA--PKPKCWKHSQPW 345
Score = 47.4 bits (111), Expect = 3e-05
Identities = 83/318 (26%), Positives = 107/318 (33%), Gaps = 45/318 (14%)
Query: 95 ASPGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAA--RAAPPRQRSLARCLPRSVG 152
+ PGP P G R G RR SA R ++ R R+ L R
Sbjct: 4 SGPGPGGSYPITFGCGARACGGRRANFSLSAAFRTCSSGTCRLTRSRKSRLERGTFSPES 63
Query: 153 SCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLG---SASPPRLAAPLAGSRAP 209
+ G P R R P + PP + G SA PPR + +GSR
Sbjct: 64 AAGTEVSGAPHPDSRTRPAAR---PPHPRTRSPPGRSGSGTTFSAVPPRPSQHQSGSRLR 120
Query: 210 SLSPFPRRCRRRAERSP---------------AGHGLPLPRSLSRGGEVVGARRRRGGEE 254
+P PR A SP A G P S +G + VGAR R G +
Sbjct: 121 PAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRAGGQ 180
Query: 255 ------RRVRG--RRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQ 306
RR R RR P +P + PG R+ W GGGPG +
Sbjct: 181 PPPLTCRRCRAAPRRSARPFRRPGLPL-KSRPGSGTGARSCGTWGS-GGGPGTAAASSPS 238
Query: 307 GEGVRGGVTP--------RARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEV 358
+ P R RG R + Q G R + A PR
Sbjct: 239 ADFSSDSPQPIIIFGGALRVRGCGGRRRSNGQGTQPGC--RLLSPAPPRRRYRKPLTLSF 296
Query: 359 PGGHTASNPTYEPLSSRR 376
GG S+PT+ ++ RR
Sbjct: 297 GGG--VSSPTHPVVAPRR 312
Score = 39.3 bits (90), Expect = 0.007
Identities = 58/214 (27%), Positives = 72/214 (33%), Gaps = 56/214 (26%)
Query: 2 ERGQRFTPHPRTPAPGCPE-------VAPQPEGTDAPGPAV---CSPTARA--------- 42
+ G R P P PGC APQ APG A P +R
Sbjct: 114 QSGSRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGAR 173
Query: 43 -------PPPIL-----PAPQRP---------PTRAREWEG-AAWAAGATGVGAALLALP 80
PPP+ AP+R P ++R G A + G G G P
Sbjct: 174 PSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGG----P 229
Query: 81 GSRRLGRVPLTFREASPGPA---PGAPRARGSCGREPGPRRRRAPSSAGKRPAAAARAAP 137
G+ F SP P GA R RG CG RR + G +P +
Sbjct: 230 GTAAASSPSADFSSDSPQPIIIFGGALRVRG-CG------GRRRSNGQGTQPGCRLLSPA 282
Query: 138 PRQRSLARCLPRSVGSCVRPSVGPSL-PRRHCRR 170
P +R + L S G V P + PRRH R
Sbjct: 283 PPRRRYRKPLTLSFGGGVSSPTHPVVAPRRHFPR 316
>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
sapiens]
Length = 384
Score = 57.4 bits (137), Expect = 2e-08
Identities = 101/341 (29%), Positives = 122/341 (35%), Gaps = 81/341 (23%)
Query: 27 GTDAPGPAVCSPTARAPPP---ILPAPQRPPTRAREWEGAAWAAGATGVGAALLALPGSR 83
GT +P A + + AP P PA + P R R G +G G A+P
Sbjct: 57 GTFSPESAAGTEVSGAPHPDSRTRPAARPPHPRTRS------PPGRSGSGTTFSAVPPRP 110
Query: 84 RLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAARAAPPRQRSL 143
+ R A+PGP PG AR S P P P AAAR AP R S
Sbjct: 111 SQHQSGSRLRPAAPGPRPGCSSARAS----PAP----------AAPQAAARTAPGRAAS- 155
Query: 144 ARCLPRSVGS-----CVRPS-VGPSLPRRHCRRHCRCHCRR--RPLPKPP-PLQPRLGSA 194
P S G RPS G P CRR CR RR RP +P PL+ R GS
Sbjct: 156 GGSGPGSRGQGSDQVGARPSRAGGQPPPLTCRR-CRAAPRRSARPFRRPGLPLKSRPGSG 214
Query: 195 SPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPA---GHGLPLPRSLSRGGEVV---GARR 248
+ R P + A SP+ P P + G V G RR
Sbjct: 215 TGARSCGTWGSGGGPGTA---------AASSPSADFSSDSPQPIIIFGGALRVRGCGGRR 265
Query: 249 RRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKR-----GGG------P 297
R G+ G + GC L SP AP R R++RK GGG P
Sbjct: 266 RSNGQ-----GTQPGCRLLSP-------APPR-------RRYRKPLTLSFGGGVSSPTHP 306
Query: 298 GVSPREGAQGEGVRGGVTPRARGSSTCLRPSPATWQGGAPY 338
V+PR R R T P P W+ P+
Sbjct: 307 VVAPRRHFPRSVPRFPAGFRTHSLGTA--PKPKCWKHSQPW 345
Score = 47.4 bits (111), Expect = 3e-05
Identities = 83/318 (26%), Positives = 107/318 (33%), Gaps = 45/318 (14%)
Query: 95 ASPGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAA--RAAPPRQRSLARCLPRSVG 152
+ PGP P G R G RR SA R ++ R R+ L R
Sbjct: 4 SGPGPGGSYPITFGCGARACGGRRANFSLSAAFRTCSSGTCRLTRSRKSRLERGTFSPES 63
Query: 153 SCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLG---SASPPRLAAPLAGSRAP 209
+ G P R R P + PP + G SA PPR + +GSR
Sbjct: 64 AAGTEVSGAPHPDSRTRPAAR---PPHPRTRSPPGRSGSGTTFSAVPPRPSQHQSGSRLR 120
Query: 210 SLSPFPRRCRRRAERSP---------------AGHGLPLPRSLSRGGEVVGARRRRGGEE 254
+P PR A SP A G P S +G + VGAR R G +
Sbjct: 121 PAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRAGGQ 180
Query: 255 ------RRVRG--RRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQ 306
RR R RR P +P + PG R+ W GGGPG +
Sbjct: 181 PPPLTCRRCRAAPRRSARPFRRPGLPL-KSRPGSGTGARSCGTWGS-GGGPGTAAASSPS 238
Query: 307 GEGVRGGVTP--------RARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEV 358
+ P R RG R + Q G R + A PR
Sbjct: 239 ADFSSDSPQPIIIFGGALRVRGCGGRRRSNGQGTQPGC--RLLSPAPPRRRYRKPLTLSF 296
Query: 359 PGGHTASNPTYEPLSSRR 376
GG S+PT+ ++ RR
Sbjct: 297 GGG--VSSPTHPVVAPRR 312
Score = 39.3 bits (90), Expect = 0.007
Identities = 58/214 (27%), Positives = 72/214 (33%), Gaps = 56/214 (26%)
Query: 2 ERGQRFTPHPRTPAPGCPE-------VAPQPEGTDAPGPAV---CSPTARA--------- 42
+ G R P P PGC APQ APG A P +R
Sbjct: 114 QSGSRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGAR 173
Query: 43 -------PPPIL-----PAPQRP---------PTRAREWEG-AAWAAGATGVGAALLALP 80
PPP+ AP+R P ++R G A + G G G P
Sbjct: 174 PSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGG----P 229
Query: 81 GSRRLGRVPLTFREASPGPA---PGAPRARGSCGREPGPRRRRAPSSAGKRPAAAARAAP 137
G+ F SP P GA R RG CG RR + G +P +
Sbjct: 230 GTAAASSPSADFSSDSPQPIIIFGGALRVRG-CG------GRRRSNGQGTQPGCRLLSPA 282
Query: 138 PRQRSLARCLPRSVGSCVRPSVGPSL-PRRHCRR 170
P +R + L S G V P + PRRH R
Sbjct: 283 PPRRRYRKPLTLSFGGGVSSPTHPVVAPRRHFPR 316
>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 57.4 bits (137), Expect = 2e-08
Identities = 101/341 (29%), Positives = 122/341 (35%), Gaps = 81/341 (23%)
Query: 27 GTDAPGPAVCSPTARAPPP---ILPAPQRPPTRAREWEGAAWAAGATGVGAALLALPGSR 83
GT +P A + + AP P PA + P R R G +G G A+P
Sbjct: 57 GTFSPESAAGTEVSGAPHPDSRTRPAARPPHPRTRS------PPGRSGSGTTFSAVPPRP 110
Query: 84 RLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAARAAPPRQRSL 143
+ R A+PGP PG AR S P P P AAAR AP R S
Sbjct: 111 SQHQSGSRLRPAAPGPRPGCSSARAS----PAP----------AAPQAAARTAPGRAAS- 155
Query: 144 ARCLPRSVGS-----CVRPS-VGPSLPRRHCRRHCRCHCRR--RPLPKPP-PLQPRLGSA 194
P S G RPS G P CRR CR RR RP +P PL+ R GS
Sbjct: 156 GGSGPGSRGQGSDQVGARPSRAGGQPPPLTCRR-CRAAPRRSARPFRRPGLPLKSRPGSG 214
Query: 195 SPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPA---GHGLPLPRSLSRGGEVV---GARR 248
+ R P + A SP+ P P + G V G RR
Sbjct: 215 TGARSCGTWGSGGGPGTA---------AASSPSADFSSDSPQPIIIFGGALRVRGCGGRR 265
Query: 249 RRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKR-----GGG------P 297
R G+ G + GC L SP AP R R++RK GGG P
Sbjct: 266 RSNGQ-----GTQPGCRLLSP-------APPR-------RRYRKPLTLSFGGGVSSPTHP 306
Query: 298 GVSPREGAQGEGVRGGVTPRARGSSTCLRPSPATWQGGAPY 338
V+PR R R T P P W+ P+
Sbjct: 307 VVAPRRHFPRSVPRFPAGFRTHSLGTA--PKPKCWKHSQPW 345
Score = 47.4 bits (111), Expect = 3e-05
Identities = 83/318 (26%), Positives = 107/318 (33%), Gaps = 45/318 (14%)
Query: 95 ASPGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAA--RAAPPRQRSLARCLPRSVG 152
+ PGP P G R G RR SA R ++ R R+ L R
Sbjct: 4 SGPGPGGSYPITFGCGARACGGRRANFSLSAAFRTCSSGTCRLTRSRKSRLERGTFSPES 63
Query: 153 SCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLG---SASPPRLAAPLAGSRAP 209
+ G P R R P + PP + G SA PPR + +GSR
Sbjct: 64 AAGTEVSGAPHPDSRTRPAAR---PPHPRTRSPPGRSGSGTTFSAVPPRPSQHQSGSRLR 120
Query: 210 SLSPFPRRCRRRAERSP---------------AGHGLPLPRSLSRGGEVVGARRRRGGEE 254
+P PR A SP A G P S +G + VGAR R G +
Sbjct: 121 PAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRAGGQ 180
Query: 255 ------RRVRG--RRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQ 306
RR R RR P +P + PG R+ W GGGPG +
Sbjct: 181 PPPLTCRRCRAAPRRSARPFRRPGLPL-KSRPGSGTGARSCGTWGS-GGGPGTAAASSPS 238
Query: 307 GEGVRGGVTP--------RARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEV 358
+ P R RG R + Q G R + A PR
Sbjct: 239 ADFSSDSPQPIIIFGGALRVRGCGGRRRSNGQGTQPGC--RLLSPAPPRRRYRKPLTLSF 296
Query: 359 PGGHTASNPTYEPLSSRR 376
GG S+PT+ ++ RR
Sbjct: 297 GGG--VSSPTHPVVAPRR 312
Score = 39.3 bits (90), Expect = 0.007
Identities = 58/214 (27%), Positives = 72/214 (33%), Gaps = 56/214 (26%)
Query: 2 ERGQRFTPHPRTPAPGCPE-------VAPQPEGTDAPGPAV---CSPTARA--------- 42
+ G R P P PGC APQ APG A P +R
Sbjct: 114 QSGSRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGAR 173
Query: 43 -------PPPIL-----PAPQRP---------PTRAREWEG-AAWAAGATGVGAALLALP 80
PPP+ AP+R P ++R G A + G G G P
Sbjct: 174 PSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGG----P 229
Query: 81 GSRRLGRVPLTFREASPGPA---PGAPRARGSCGREPGPRRRRAPSSAGKRPAAAARAAP 137
G+ F SP P GA R RG CG RR + G +P +
Sbjct: 230 GTAAASSPSADFSSDSPQPIIIFGGALRVRG-CG------GRRRSNGQGTQPGCRLLSPA 282
Query: 138 PRQRSLARCLPRSVGSCVRPSVGPSL-PRRHCRR 170
P +R + L S G V P + PRRH R
Sbjct: 283 PPRRRYRKPLTLSFGGGVSSPTHPVVAPRRHFPR 316
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 57.4 bits (137), Expect = 2e-08
Identities = 105/404 (25%), Positives = 134/404 (33%), Gaps = 94/404 (23%)
Query: 6 RFTPHPRTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPILPAPQRPPTRAREWEGAAW 65
R +P R+ + PEV +P P S + +P P PAP+ P R+R
Sbjct: 1590 RLSPR-RSRSGSSPEVKDKPRAA----PRAQSGSDSSPEPKAPAPRALPRRSRS------ 1638
Query: 66 AAGATGVGAALLALPGSRRLGRVPLTFREASPGPAP-GAPRARGSCGREPGPRRRRAPSS 124
GS GR GP+P G+ S P R R S
Sbjct: 1639 ---------------GSSSKGR----------GPSPEGSSSTESSPEHPPKSRTARRGSR 1673
Query: 125 AGKRPAAAARAAPPRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKP 184
+ P +R PPR+RS RS R + R RR +
Sbjct: 1674 SSPEPKTKSR-TPPRRRS-----SRSSPELTRKA-------RLSRRSRSASSSPETRSRT 1720
Query: 185 PPLQPRLGSASPPRLAAPLAGSRAPSLSPFPR---RCRRRAERSPAGHGLPLPRSLSRGG 241
PP R S S P A SR + PR RR SP GL RS SR
Sbjct: 1721 PPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRRE 1780
Query: 242 EVVGARRR-RGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVS 300
+ RRR R G + RRQ R +R R+R GG G
Sbjct: 1781 KTRTTRRRDRSGSSQSTSRRRQ-------------------RSRSRSRVTRRRRGGSGYH 1821
Query: 301 PREGAQGEGVRGGV--------TPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPS 352
R A+ E R TP + R SPA W+ R+ A P S
Sbjct: 1822 SRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWK-----RSRSRASPATHRRS 1876
Query: 353 AEAEEVPGGHTASNPTYEPLSSRR-------TKAPSEGRDSPSS 389
+ + + T P+S RR T+ S R SP S
Sbjct: 1877 RSRTPLISRRRSRSRT-SPVSRRRSRSRTSVTRRRSRSRASPVS 1919
Score = 50.8 bits (120), Expect = 2e-06
Identities = 84/346 (24%), Positives = 122/346 (35%), Gaps = 41/346 (11%)
Query: 93 REASPGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAARAAPPR---QRSLARCLPR 149
R S P G R+R R G R P G+ +++ R R +RS + P
Sbjct: 691 RSRSRTPRRGRSRSRSLVRR--GRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPE 748
Query: 150 SVGSCVRPSVGPSLPRRHCRRHCRCHCRRR-----PLPKP----PPLQPRLGSASP-PRL 199
S + SL + R RR P PK PP + R GS+ P +
Sbjct: 749 MKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKS 808
Query: 200 AAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRG 259
P SR+ S SP P++ + R P P+ S G+ E+ V
Sbjct: 809 RTPPRRSRSSS-SPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSITSPQANEQSVTP 867
Query: 260 RRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSP-REGAQGEGVRGGVTPRA 318
+R+ C SP P R ++ K P SP R + V+ ++PR
Sbjct: 868 QRRSCFESSPDPELKSRTPSRHSCSGSSPPRVKSSTPPRQSPSRSSSPQPKVKAIISPRQ 927
Query: 319 RGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEPLSSRRTK 378
R S PSP+ R PR S + V L R +
Sbjct: 928 RSHSGSSSPSPS--------RVTSRTTPRRSRSVSPCSNVE----------SRLLPRYSH 969
Query: 379 APSEGRDSPSSPATSTHYLDRESGLGSVNSHPSRSPYNWSPPSPSV 424
+ S D+ P T R+S GS++ +P +PP PS+
Sbjct: 970 SGSSSPDTKVKPETP----PRQSHSGSISPYPKVKAQ--TPPGPSL 1009
Score = 50.1 bits (118), Expect = 4e-06
Identities = 98/381 (25%), Positives = 143/381 (37%), Gaps = 46/381 (12%)
Query: 83 RRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRAPSSAGK-RPAAAARAAPPRQR 141
R R P R + P R+R S R G R R P+ G+ R AR R R
Sbjct: 614 RSRSRTPARRRSRTRSPVRRRSRSR-SPARRSGRSRSRTPARRGRSRSRTPARRGRSRSR 672
Query: 142 SLARCLPRSVG-SCVRPSVGPSLPRRHCRRHCRCHCRR-RPLPKPPPLQPRLGSASPPRL 199
+ AR RS + R S R R R RR R + P + R GS+S +
Sbjct: 673 TPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKN 732
Query: 200 AAPLAGSRAPS-LSPFPRRCR---RRAE-----RSPAGHGLPLPRSLS-------RGGEV 243
+ + R+ S SP ++ R RR+ RS A L L RSLS + +
Sbjct: 733 KSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQT 792
Query: 244 VGARRRRGGEERRVRGR---RQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVS 300
R R G + + + R R+ + SPP P R ++ + + G P
Sbjct: 793 PPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTP--- 849
Query: 301 PREGA--QGEGVRGGVTPRARGSSTCLRPSP-----------ATWQGGAPYRAIFAAGPR 347
PR+G+ + VTP+ R +C SP + G +P R + PR
Sbjct: 850 PRQGSITSPQANEQSVTPQRR---SCFESSPDPELKSRTPSRHSCSGSSPPRVKSSTPPR 906
Query: 348 LSAPSAEAEEVPGGHTASNPTYEPLSSRRTKAPSE--GRDSPSSPATSTHYLDRESGLGS 405
S PS + P +P S + +PS R +P + + + ES L
Sbjct: 907 QS-PSRSSSPQPKVKAIISPRQRSHSGSSSPSPSRVTSRTTPRRSRSVSPCSNVESRLLP 965
Query: 406 VNSHPSRSPYNWSPPSPSVPP 426
SH S + + P PP
Sbjct: 966 RYSHSGSSSPD-TKVKPETPP 985
Score = 43.5 bits (101), Expect = 4e-04
Identities = 81/306 (26%), Positives = 102/306 (33%), Gaps = 30/306 (9%)
Query: 95 ASPGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPA-AAARAAPPRQRSLARC---LPRS 150
+S GP P AP R G + A + + P + A+P R RS + LP+S
Sbjct: 357 SSTGPEPPAPTPL-LAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQS 415
Query: 151 VGS-CVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPP-RLAAPLAGSRA 208
S PS P+ RH P P P P R S+SP + + R
Sbjct: 416 SSSESSPPSPQPTKVSRHASSS-----PESPKPAPAPGSHREISSSPTSKNRSHGRAKRD 470
Query: 209 PSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGS 268
S S P R R RSPA RS SR G R R + RR R ++ S
Sbjct: 471 KSHSHTPSR-RMGRSRSPAT--AKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRS 527
Query: 269 PPIPA---GPAAPGRAGERRAARQWRKRGGGPGVSPREGAQGEGVRGGVTPRARGSSTCL 325
P P PG + R R+ R R G S G TP RG S
Sbjct: 528 PQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSR 587
Query: 326 RPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEPLSSRRTKAPSEGRD 385
P+ + P R P S RT++P R
Sbjct: 588 TPARRRSRSRTPTR------------RRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRS 635
Query: 386 SPSSPA 391
SPA
Sbjct: 636 RSRSPA 641
Score = 43.1 bits (100), Expect = 5e-04
Identities = 80/305 (26%), Positives = 112/305 (36%), Gaps = 41/305 (13%)
Query: 95 ASPGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAARAAPPRQRSLARCLPRSVGSC 154
A+ G + AR R P RRR+ S R + +R R RS +R R
Sbjct: 568 ATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPAR----- 622
Query: 155 VRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRLAAPLAGSRAPSLSPF 214
R S S RR R R + P + R S +P R + SR P+
Sbjct: 623 -RRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGR--SRSRTPA---- 675
Query: 215 PRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRV---RGR------RQGCA 265
RR R R+PA G R+ RG + RRG R RGR R+ +
Sbjct: 676 -RRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKS 734
Query: 266 LGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQGEGVRGGVTPRARGSSTCL 325
S ++P R ++R+ R SPR A+ R + GSS C
Sbjct: 735 RTSQRRSRSNSSPEMKKSRISSRRSRSLS-----SPRSKAKS---RLSLRRSLSGSSPCP 786
Query: 326 RPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEPLSSRRTKAPSEGRD 385
+ T P R+ + S P A++ P S + P +++K PS
Sbjct: 787 KQKSQT----PPRRSRSGS----SQPKAKSRTPP---RRSRSSSSPPPKQKSKTPSRQSH 835
Query: 386 SPSSP 390
S SSP
Sbjct: 836 SSSSP 840
Score = 42.4 bits (98), Expect = 8e-04
Identities = 51/216 (23%), Positives = 81/216 (37%), Gaps = 37/216 (17%)
Query: 16 PGCPEVAPQPEGTDAPGPAVCSPTARAPPPILPAPQRPPTRAREWEGAAWAAGATGVGAA 75
P PEVA + + P P R P P PA ++ + + ++ ++ ++ ++
Sbjct: 2569 PVQPEVALKRVPSPTPAPKEAVREGRPPEPT-PAKRKRRSSSSSSSSSSSSSSSSSSSSS 2627
Query: 76 LLALPGSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAARA 135
+ S + +SP PA +PGP+ P+S K P R+
Sbjct: 2628 SSSSSSSSSSSSSSSSSSSSSPSPA------------KPGPQALPKPASPKKPPPGERRS 2675
Query: 136 APPRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSAS 195
PR+ + RS+ S P RRRP P+P P + S+
Sbjct: 2676 RSPRKPIDSLRDSRSL------SYSPVE-------------RRRPSPQPSPRDQQSSSSE 2716
Query: 196 PPRLAAPLAGSRAPS-----LSPFPRRCRRRAERSP 226
SR+PS +P PR R R+ RSP
Sbjct: 2717 RGSRRGQRGDSRSPSHKRRRETPSPRPMRHRSSRSP 2752
Score = 41.2 bits (95), Expect = 0.002
Identities = 36/131 (27%), Positives = 45/131 (34%), Gaps = 22/131 (16%)
Query: 79 LPGSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAARAAPP 138
LP R R PL R S P R + S R P RRR+ S + + +A
Sbjct: 2037 LPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPAIRRRSASGSSSDRSRSATPPAT 2096
Query: 139 RQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPR 198
R S +R P ++ S R C RP P PL P
Sbjct: 2097 RNHSGSRTPPVALNS------------------SRMSCFSRPSMSPTPLD----RCRSPG 2134
Query: 199 LAAPLAGSRAP 209
+ PL SR P
Sbjct: 2135 MLEPLGSSRTP 2145
Score = 40.8 bits (94), Expect = 0.002
Identities = 96/373 (25%), Positives = 120/373 (32%), Gaps = 87/373 (23%)
Query: 85 LGRVPLT-FREASPGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAARAAPPRQRSL 143
L VP T RE S + +P + R P RR R+ SS G R + P + SL
Sbjct: 1407 LDAVPRTPSRERSSSAS--SPEMKDGLPRTPS-RRSRSGSSPGLRDGSGT----PSRHSL 1459
Query: 144 ARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRL---- 199
+ P +PR R C P P +PR S S P L
Sbjct: 1460 SGSSPGM----------KDIPRTPSRGRSECDSSPEPKALPQTPRPRSRSPSSPELNNKC 1509
Query: 200 -------------------AAPLAGSRA-----------PSLSPFPRRCRRRAERSPAGH 229
A G R+ PS SP R + S A
Sbjct: 1510 LTPQRERSGSESSVDQKTVARTPLGQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKT 1569
Query: 230 GLPLPRSLSRGGEV--------VGARRRRGGEERRVRGR-----RQGCALGSPPIPAGPA 276
PL R SR G + RR R G V+ + R S P P PA
Sbjct: 1570 RTPL-RQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPA 1628
Query: 277 APGRAGERRAARQWRKRGGGP---GVSPREGAQGEGVRGGVTPRARGSSTCLRPSPATWQ 333
RA RR+ +G GP G S E + + R SS P P T
Sbjct: 1629 P--RALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSS----PEPKTKS 1682
Query: 334 GGAPYRAIFAAGP------RLSAPSAEAEEVPGGHTASNPTYEPLSSRRTKAPSE----- 382
P R + P RLS S A P + + P + S + P+E
Sbjct: 1683 RTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSS 1742
Query: 383 -GRDSPSSPATST 394
R S SSP T T
Sbjct: 1743 RRRRSASSPRTKT 1755
Score = 39.7 bits (91), Expect = 0.005
Identities = 78/354 (22%), Positives = 122/354 (34%), Gaps = 47/354 (13%)
Query: 78 ALPGSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRAPSSAGK-------RPA 130
+L R + L+ R + G +P P+ + + PRR R+ SS K R +
Sbjct: 761 SLSSPRSKAKSRLSLRRSLSGSSP-CPKQKS----QTPPRRSRSGSSQPKAKSRTPPRRS 815
Query: 131 AAARAAPPRQRSLARCLPRSVGSCVRPSVGPSLPRRHC---------------RRHCRCH 175
++ + PP+Q+S S P V P R RR C
Sbjct: 816 RSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSITSPQANEQSVTPQRRSCFES 875
Query: 176 CRRRPLPKPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRA----ERSPAGHGL 231
L P + +SPPR+ + ++PS S P+ + +RS +G
Sbjct: 876 SPDPELKSRTPSRHSCSGSSPPRVKSSTPPRQSPSRSSSPQPKVKAIISPRQRSHSGSSS 935
Query: 232 PLPRSLSRGGEVVGARRRRG-----GEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRA 286
P P SR RR R E R+ R SP P P R +
Sbjct: 936 PSP---SRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTKVKPETPPRQSHSGS 992
Query: 287 ARQWRKRGG----GPGVS-PREGAQGEGVRGGVTPRARGS-STCLRPSPATWQGGAPY-- 338
+ K GP +S + E + + GS S C +T G + +
Sbjct: 993 ISPYPKVKAQTPPGPSLSGSKSPCPQEKSKDSLVQSCPGSLSLCAGVKSSTPPGESYFGV 1052
Query: 339 RAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEPLSSRRTKAPSEGRDSPSSPAT 392
++ G ++P ++ S+ L S+ +P GR SSP T
Sbjct: 1053 SSLQLKGQSQTSPDHRSDTSSPEVRQSHSESPSLQSKSQTSPKGGRSRSSSPVT 1106
Score = 37.7 bits (86), Expect = 0.020
Identities = 65/231 (28%), Positives = 86/231 (37%), Gaps = 29/231 (12%)
Query: 80 PGSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAARAAP-P 138
P R R S P R R P RRR ++ R + +RA+P
Sbjct: 1860 PWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVS 1919
Query: 139 RQRSLARCLP------RSVGSCVR---PSVGPSLPRRHCRRHCRCHCRRRPLPKPPPL-Q 188
R+RS +R P RS R S P + RR R RRR + P+ +
Sbjct: 1920 RRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITR 1979
Query: 189 PRLGSASPP-------RLAAPLAGSRAPS-LSPFPRRCRRRAERSPA------GHGLPLP 234
R S + P +P+ R+ S SP RR R R+ PA LP
Sbjct: 1980 RRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRR-RSRSRTPPAIRRRSRSRTPLLP 2038
Query: 235 RSLSRGGEVVGARRR-RGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGER 284
R SR + RRR R R RG+R SPP +A G + +R
Sbjct: 2039 RKRSRSRSPLAIRRRSRSRTPRTARGKRS--LTRSPPAIRRRSASGSSSDR 2087
Score = 36.6 bits (83), Expect = 0.045
Identities = 87/325 (26%), Positives = 111/325 (34%), Gaps = 49/325 (15%)
Query: 83 RRLGRVPLTFREASPGPAPGAPRARG-----------SCGREPGPRRRRAPS--SAGKRP 129
R R P T R+ S AP R S R P RRR+ S S R
Sbjct: 1839 RGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRR 1898
Query: 130 AAAARAAPPRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQP 189
+ +R + R+RS +R P V S P + RR R RR PP +
Sbjct: 1899 RSRSRTSVTRRRSRSRASP--VSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRR 1956
Query: 190 RLGSASPP-------RLAAPLAGSRAPS-LSPFPRRCRRRAERSPAGHGLPLPRSLSRGG 241
R S +PP +P+ R+ S SP RR R R+ SP + RS SR
Sbjct: 1957 RSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRR-RSRSRTSP----VTRRRSRSRTS 2011
Query: 242 EVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAP------GRAGERRAARQWRKRGG 295
V RR R +R R + P + +P R+ R AR R
Sbjct: 2012 PVT-RRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTR 2070
Query: 296 GPGVSPREGAQG---EGVRGGVTPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPS 352
P R A G + R P R S P A R + P +S
Sbjct: 2071 SPPAIRRRSASGSSSDRSRSATPPATRNHSGSRTPPVALNSS----RMSCFSRPSMSPTP 2126
Query: 353 AEAEEVPGGHTASNPTYEPLSSRRT 377
+ PG EPL S RT
Sbjct: 2127 LDRCRSPG-------MLEPLGSSRT 2144
Score = 34.3 bits (77), Expect = 0.22
Identities = 61/244 (25%), Positives = 90/244 (36%), Gaps = 21/244 (8%)
Query: 96 SPGPAPGAPRARGSCGREPGPRRRRAPSS---AGKRPAA--AARAAPPRQRSLARCLP-- 148
SP PA G + EPG + PSS A K+P++ + +++S R P
Sbjct: 295 SPSPASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRPSPSP 354
Query: 149 -RSVGSCVRPSVGPSLPRRH---CRRHCRCHCRRRPLPKP---PPLQPRLGSASPPRLAA 201
RS P+ P L RH + + P+ P P + R SP +L
Sbjct: 355 ERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQ 414
Query: 202 PLAGSRAPSLSPFPRRCRRRAERSP-AGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGR 260
+ +P SP P + R A SP + P P S ++ R G +R +
Sbjct: 415 SSSSESSPP-SPQPTKVSRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSH 473
Query: 261 RQ--GCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQGEGVRGGVTPRA 318
+G PA A GR+ R ++ R P AQ G +P+
Sbjct: 474 SHTPSRRMGRSRSPA-TAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWG--RSRSPQR 530
Query: 319 RGSS 322
RG S
Sbjct: 531 RGRS 534
Score = 32.7 bits (73), Expect = 0.64
Identities = 51/251 (20%), Positives = 86/251 (34%), Gaps = 49/251 (19%)
Query: 178 RRPLPKPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSL 237
++P P+PP P L + SR+P+ P ++ +++ +R
Sbjct: 161 KQPAPEPP---------KPYSLVRESSSSRSPT--PKQKKKKKKKDRG------------ 197
Query: 238 SRGGEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGP 297
R E RR R ++ + R + S +P +R++ + RKR
Sbjct: 198 -RRSESSSPRRERKKSSKKKKHRSE-----SESKKRKHRSPTPKSKRKSKDKKRKRSRST 251
Query: 298 GVSPRE-----GAQGEGVRGGVTPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPS 352
+P+ + T R+R S + G +P A G AP
Sbjct: 252 TPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPASGRRGEG-DAPF 310
Query: 353 AEAEEVPGGHTASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHYLDRESGLGSVNSHPSR 412
+E PG S++R +P PSSP +E + P R
Sbjct: 311 SE----PG----------TTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRPSPSPER 356
Query: 413 SPYNWSPPSPS 423
S PP+P+
Sbjct: 357 SSTGPEPPAPT 367
Score = 32.3 bits (72), Expect = 0.84
Identities = 64/295 (21%), Positives = 101/295 (34%), Gaps = 48/295 (16%)
Query: 149 RSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRLAA------P 202
+S+ S V +V P P R + LP+ P + R GS+ R +
Sbjct: 1400 QSISSPVLDAV-PRTPSRERSSSASSPEMKDGLPRTPSRRSRSGSSPGLRDGSGTPSRHS 1458
Query: 203 LAGSRAPSLSPFPR---RCRRRAERSPAGHGLP-LPRSLSRG-------GEVVGARRRRG 251
L+GS +P + PR R R + SP LP PR SR + + +R R
Sbjct: 1459 LSGS-SPGMKDIPRTPSRGRSECDSSPEPKALPQTPRPRSRSPSSPELNNKCLTPQRERS 1517
Query: 252 GEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQGEGVR 311
G E V + R R R G +Q V+
Sbjct: 1518 GSESSVDQKTVA---------------------RTPLGQRSRSGS--------SQELDVK 1548
Query: 312 GGVTPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEP 371
+P+ R S S A + R+ + P + + S + ++ +P
Sbjct: 1549 PSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKP 1608
Query: 372 LSSRRTKAPSEGRDSPSSPATSTHYLDRESGLGSVNSHPSRSPYNWSPPSPSVPP 426
++ R ++ S+ P +PA SG S PS + + SP PP
Sbjct: 1609 RAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPP 1663
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 57.0 bits (136), Expect = 3e-08
Identities = 119/464 (25%), Positives = 161/464 (34%), Gaps = 88/464 (18%)
Query: 4 GQRFTPHPRTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPIL--PAPQRPPTRAREWE 61
G RF + P PE P APGP +P + P P + PAP+ RA
Sbjct: 1037 GLRFPRNTERP----PETGPWR----APGPWEKTPESWGPAPTIGEPAPETSLERA---- 1084
Query: 62 GAAWAAGATGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRA 121
A A+ SR G E +PGP AP+ G+ EPG RR A
Sbjct: 1085 ------------PAPSAVVSSRNGG-------ETAPGPLGPAPK-NGTL--EPGTERR-A 1121
Query: 122 PSSAGKRPAAAARAAPPRQRSLARCLPRSVGSCVRPSVGPSL---PRRHCRRHCRCHCRR 178
P + G A RA + L VG+ P GP + + R
Sbjct: 1122 PETGG-----APRAPGAGRLDLGSGGRAPVGTGTAPGGGPGSGVDAKAGWVDNTRPQPPP 1176
Query: 179 RPLPKPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLS 238
PLP PP QPR +PPR + AP P R + + +G G P P+
Sbjct: 1177 PPLPPPPEAQPRRLEPAPPRARPEV----APEGEPGAPDSRAGGDTALSGDGDP-PKPER 1231
Query: 239 RGGEVVGARRRRG---GEERRVRGRRQGCALGSPPIP------AGPAAPGRAGERRAARQ 289
+G E+ G G +++ R +L PP+ GP P G A
Sbjct: 1232 KGPEMPRLFLDLGPPQGNSEQIKARLSRLSLALPPLTLTPFPGPGPRRPPWEGADAGAAG 1291
Query: 290 WRKRG-GGPGVSPREG------------AQGEGVRGGV--TPRARGSSTCLRPSPATWQG 334
G G PG + +G A G G RAR + + S A
Sbjct: 1292 GEAGGAGAPGPAEEDGEDEDEDEEEDEEAAAPGAAAGPRGPGRARAAPVPVVVSSADADA 1351
Query: 335 GAPYRAIFAAGPRLSAPSAEAE--------EVPGGHTASNPTYE-PLSSRRTKAPSEGRD 385
P R + + PR + ++E G T E P + +AP EG
Sbjct: 1352 ARPLRGLLKS-PRGADEPEDSELERKRKMVSFHGDVTVYLFDQETPTNELSVQAPPEGDT 1410
Query: 386 SPS---SPATSTHYLDRESGLGSVNSHPSRSPYNWSPPSPSVPP 426
PS +P T H G S N + W+ P +PP
Sbjct: 1411 DPSTPPAPPTPPHPATPGDGFPS-NDSGFGGSFEWAEDFPLLPP 1453
Score = 40.0 bits (92), Expect = 0.004
Identities = 119/474 (25%), Positives = 154/474 (32%), Gaps = 105/474 (22%)
Query: 16 PGCPEVAPQPEGTDA-PGPAVCSPTARAPPPILPAPQRPPTRAREWEGAAWAAGATGVGA 74
P P + PE D G A R PPP P P PP RA A+
Sbjct: 750 PMAPPASAPPEFLDPLMGAAAPQYPGRGPPPA-PPPPPPPPRAPA------DPAASPDPP 802
Query: 75 ALLALPGSRRLGRVPLTFREASPGPAPG----------APRAR---GSCGREPGPRRRRA 121
+ +A PGS +SPGP PG +P G E G R RA
Sbjct: 803 SAVASPGSGL----------SSPGPKPGDSGYETETPFSPEGAFPGGGAAEEEGVPRPRA 852
Query: 122 PSSAGKRPAAAARAAPPRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPL 181
P + P A PP L PR +P+ + R R L
Sbjct: 853 PP---EPPDPGAPRPPPDPGPLPLPGPRE-----KPTFVVQVSTEQLLMSLREDVTRNLL 904
Query: 182 PKPPPLQPRLGSASPPRLAAPLAGSR--APSLSPFPRRCRRRAERSPAGHGLPLPR-SLS 238
+ G PR A G+R P L+ P + G+G P SL
Sbjct: 905 GEKGATARETG----PRKAGRGPGNREKVPGLNRDP---------TVLGNGKQAPSLSLP 951
Query: 239 RGGEVV---GARRRRGGEERRVRGRRQGCALGSPP-----IPAGPAAPGRA-------GE 283
G V G +R G EE+ + ALGSP + G P R GE
Sbjct: 952 VNGVTVLENGDQRAPGIEEKAA----ENGALGSPEREEKVLENGELTPPRREEKALENGE 1007
Query: 284 RRAARQWRKRGGGPGVSPREGAQGEGVRGGV-----TPRARGSSTCLRPSP--ATWQGGA 336
R+ K G++P + GG+ T R + P P T +
Sbjct: 1008 LRSPEAGEKVLVNGGLTPPKSEDKVSENGGLRFPRNTERPPETGPWRAPGPWEKTPESWG 1067
Query: 337 PYRAIFAAGP-----RLSAPSAEAEEVPGGHTASNP--------TYEPLSSRRT------ 377
P I P R APSA GG TA P T EP + RR
Sbjct: 1068 PAPTIGEPAPETSLERAPAPSAVVSSRNGGETAPGPLGPAPKNGTLEPGTERRAPETGGA 1127
Query: 378 -KAPSEGRDSPSSPATSTHYLDRESGLGSVNSHPSRSPY----NWSPPSPSVPP 426
+AP GR S + G G + +++ + PP P +PP
Sbjct: 1128 PRAPGAGRLDLGSGGRAPVGTGTAPGGGPGSGVDAKAGWVDNTRPQPPPPPLPP 1181
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 56.6 bits (135), Expect = 4e-08
Identities = 109/429 (25%), Positives = 147/429 (34%), Gaps = 76/429 (17%)
Query: 37 SPTARAPPPILPAPQRPPTRAREWEG-AAWAAGATGVGAALLALP-------------GS 82
+P A A P P PQ P RA E + + A + G GA + L G
Sbjct: 420 TPAASATPTAQPLPQPPAPRAPEGDDFLSLHAESDGEGALQVDLGEPAPAPPAADSRWGG 479
Query: 83 RRLGRVPLTFREA-------SPGPAPGAPRARGSCGREPGPRRRR--------APSSAGK 127
L R LT R SP PAP A G R+ R R+ A SS+G
Sbjct: 480 LDLRRKILTQRRERYRQRSPSPAPAPAPAAAAGPPTRKKSRRERKRSGEAKEAASSSSGT 539
Query: 128 RPAAAARAAPPRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPL 187
+PA A A+P + R R GS H RRR +
Sbjct: 540 QPAPPAPASPWDSKK-HRSRDRKPGS-----------------HASSSARRRSRSRSRSR 581
Query: 188 QPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGAR 247
R S S R SR+ R RRR RS + S SR G
Sbjct: 582 STRRRSRSTDRRRGGSRRSRS-------REKRRRRRRSASPPPATSSSSSSRRERHRGKH 634
Query: 248 RRRGG-EERRVRGRRQG---CALGSPPIPAGPAAPGRAGERRAARQWRKRGG-GPGVSPR 302
R GG ++++ R R +G GS PA PA P R R+RG P +
Sbjct: 635 RDGGGSKKKKKRSRSRGEKRSGDGSEKAPA-PAPPPSGSTSCGDRDSRRRGAVPPSIQDL 693
Query: 303 EGAQGEGVRGGVTPRARGSSTCLRPSPATWQGGAPYRAIF-----AAGPRLSAPSAEAEE 357
++ +T S PSPA +P R + +G S++ +
Sbjct: 694 TDHDLFAIKRTITVGRLDKSDPRGPSPA--PASSPKREVLYDSEGLSGEERGGKSSQKDR 751
Query: 358 VPGGHTASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHYLDRESGLGSVNSHPSR--SPY 415
G +S+ + SRR RD DR+ S + P + +P
Sbjct: 752 RRSGAASSSSSSREKGSRRKALDGGDRDRDRD-------RDRDRDRSSKKARPPKESAPS 804
Query: 416 NWSPPSPSV 424
+ PP P V
Sbjct: 805 SGPPPKPPV 813
Score = 33.9 bits (76), Expect = 0.29
Identities = 89/375 (23%), Positives = 124/375 (33%), Gaps = 93/375 (24%)
Query: 97 PGPAPGAPRARGSCGREPGPRRR-----------RAPSSAGKRPAAAARAAPP------- 138
P PAPG P S + RRR R + + A A PP
Sbjct: 329 PTPAPGTPPQVDSTRADGAMRRRVFVVGTEAEACREGKVSVEVVTAGGAALPPPLLPPGD 388
Query: 139 ------------RQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPP- 185
+ LA L R G RP+ S +PLP+PP
Sbjct: 389 SEIEEGEIVQPEEEPRLALSLFRPGGRAARPTPAASATP-----------TAQPLPQPPA 437
Query: 186 --------------------PLQPRLGSASPPRLAAPLAGSRAPSL----SPFPRRCRRR 221
LQ LG +P A P A SR L +R R
Sbjct: 438 PRAPEGDDFLSLHAESDGEGALQVDLGEPAP---APPAADSRWGGLDLRRKILTQRRERY 494
Query: 222 AERSPAGHGLPLPRSLSRGGEVVGAR--RRRGGEERRVRGRRQGCALGSPPIPAGPAAPG 279
+RSP+ P P + + +R R+R GE + + G+ P P PA+P
Sbjct: 495 RQRSPSPAPAPAPAAAAGPPTRKKSRRERKRSGEAKEA----ASSSSGTQPAPPAPASPW 550
Query: 280 RAGERRAARQWRKRGGGPGVSPREGAQGEG------VRGGVTPRARGSSTCLRPSPATWQ 333
+ + R+ + RK G S R ++ R T R RG S R S + +
Sbjct: 551 DSKKHRS--RDRKPGSHASSSARRRSRSRSRSRSTRRRSRSTDRRRGGS---RRSRSREK 605
Query: 334 GGAPYRAIFAAGPRLSAPSAEAEEVPGGHT---ASNPTYEPLSSRRTKAPSEGRDSPSSP 390
R+ S+ S+ E G H S + SR K +G + +P
Sbjct: 606 RRRRRRSASPPPATSSSSSSRRERHRGKHRDGGGSKKKKKRSRSRGEKRSGDGSEKAPAP 665
Query: 391 AT----STHYLDRES 401
A ST DR+S
Sbjct: 666 APPPSGSTSCGDRDS 680
Score = 32.0 bits (71), Expect = 1.1
Identities = 69/305 (22%), Positives = 95/305 (31%), Gaps = 42/305 (13%)
Query: 105 RARGSCGREPGPRRRRAPSSAGKRPAAAARAAPPRQRSLARCLPRSV------GSCVRPS 158
R R ++ P + APSS G P + S + C R V +R
Sbjct: 786 RDRDRSSKKARPPKESAPSS-GPPPKPPVSSGSGSSSSSSSCSSRKVKLQSKVAVLIREG 844
Query: 159 VGPSLPRRHCR---------RHCRCHCRRRPLPKPPPLQPRLGSASPPRLAAPL------ 203
V + P + + R R P KP P + + P P
Sbjct: 845 VSSTTPAKDAASAGLGSIGVKFSRDRESRSPFLKPDERAPTEMAKAAPGSTKPKKTKVKA 904
Query: 204 -AGSRAPS-----LSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRV 257
AG++ P R + R+ G G + S+ A +G EE
Sbjct: 905 KAGAKKTKGTKGKTKPSKTRKKVRSGGGSGGSGGQVSLKKSKADSCSQAAGTKGAEETSW 964
Query: 258 RGRRQGCALGS-PPIPAGPAAPGRAGERRAARQWRKRGGGPGVS--PREGAQGEGVRGGV 314
G + + S PP A P P + + K P VS P E + GVRGG
Sbjct: 965 SGEERAAKVPSTPPPKAAPPPPALTPDSQTVDSSCKT---PEVSFLPEEATEEAGVRGGA 1021
Query: 315 TPRARGSSTCLRPSPATWQGGAPYRAI-FAAGPRLSAPSA-------EAEEVPGGHTASN 366
Q A A AA +APSA AE+ P +
Sbjct: 1022 EEEEEEEEEEEEEEEEEEQQPATTTATSTAAAAPSTAPSAGSTAGDSGAEDGPASRVSQL 1081
Query: 367 PTYEP 371
PT P
Sbjct: 1082 PTLPP 1086
Score = 29.6 bits (65), Expect = 5.5
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 14 PAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPILPAPQRPP 54
PAP P + +P P+ SP+ PPP PAP PP
Sbjct: 184 PAP--PPAPSSASSSPSPSPSSSSPSPPPPPP-PPAPPAPP 221
Score = 28.9 bits (63), Expect = 9.3
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 4/40 (10%)
Query: 14 PAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPILPAPQRP 53
PAP +P P +P + SP PPP PAP P
Sbjct: 188 PAPSSASSSPSP----SPSSSSPSPPPPPPPPAPPAPPAP 223
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 56.2 bits (134), Expect = 5e-08
Identities = 113/445 (25%), Positives = 154/445 (34%), Gaps = 83/445 (18%)
Query: 9 PHPRTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPILPAPQRPPTRAREWEGAAWAAG 68
P R PA G E AP + T +PGP V SP RA P P E
Sbjct: 90 PASRPPASGRGERAPPAKNT-SPGP-VSSP-GRASGTTRPGPLGQKGLRISAEETVARGK 146
Query: 69 ATGVGAALLALPGSRRLGRVPLTFREASPG-PAPGAPRARGSCGRE-----PGPRRRRAP 122
AT G+RR P +PG P+P R + G E P P R P
Sbjct: 147 ATEAPKRSALSAGARRDTSGP------TPGTPSPAMARRSRAAGTEVGLPRPAPSARPRP 200
Query: 123 SSAGKR-------------PAAAARAAPPRQRSLARCLPRSVGSCVRPSVGPSLPRRHCR 169
+ G R P+ AAR P L R RS+ S P P+ R
Sbjct: 201 PTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSAR 260
Query: 170 RHCRCHCRRRPLPKPPPLQP-RLGSASPPRL-AAPLAG--SRAPSLSPFPRRCRRRAERS 225
R PKP LQ R +PPR AAP G S +P +P P + ++
Sbjct: 261 GTPRAPAHPSQ-PKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQ-SQAP 318
Query: 226 PAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERR 285
P P SL+ C L +P +P P +P
Sbjct: 319 PTLPATPHSSSLT-------------------------CQLATP-LPLAPPSPS------ 346
Query: 286 AARQWRKRGGGPGVSPREGAQGEGVRGGVTPRARGSSTCLRPSPATWQGGAPYRAIFAAG 345
A + P P + G +P + + + L P + P +A
Sbjct: 347 APPSLQTLPSPPATPPSQATTSLG-----SPTLQATHSFLPSPPLSPLATPPPQA----P 397
Query: 346 PRLSAPSAEAEEVPGGHTASNPTYEPLSSRRTKAPSEGR----DSPSSPATSTHYLDRES 401
P L+ P +A P ++P PL++ +AP+ +P SP S S
Sbjct: 398 PALALPPLQAPPSP----PASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFS 453
Query: 402 GLGSVNSHPSRSPYNWSPPSPSVPP 426
S PS +P + +PPS + PP
Sbjct: 454 PPASPPVSPSATPPSQAPPSLAAPP 478
Score = 53.1 bits (126), Expect = 5e-07
Identities = 105/409 (25%), Positives = 148/409 (36%), Gaps = 84/409 (20%)
Query: 32 GPAVCSPTARAPPPILPAPQ---RPPTRAREWEGAAWAAGATGVGAALLALPGSRRLGRV 88
G A +P ARAP + P P RPP AAL L + +GR
Sbjct: 11 GAAARTPAARAPGLLTPRPPGSPRPPPPVTP--------------AALRVLGAAGAVGRK 56
Query: 89 PLTFREASPGPAP---GAPRARGSCGREPGPRRRRAPSSAG--KRPAAAARA--APPRQR 141
PL R G A APRA GP R SS RP A+ R APP +
Sbjct: 57 PLAERAGGIGGATIPESAPRA--------GPTRSAGTSSRNPASRPPASGRGERAPPAKN 108
Query: 142 SLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRR---RPLPKPPPLQPRLGSASPPR 198
+ P V S R S G + P ++ R R P + L + +
Sbjct: 109 TS----PGPVSSPGRAS-GTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRD 163
Query: 199 LAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVR 258
+ P G+ +P+++ RR+ + GLP P +R R G + V
Sbjct: 164 TSGPTPGTPSPAMA-------RRSRAAGTEVGLPRPAPSAR------PRPPTEGPRKSVS 210
Query: 259 GRRQGCALGSPPIPAGPAAPGRAGE-RRAARQWRKRGGGPGVSPREGAQGEGVRGGVTPR 317
+ + P PA P G +R A + P SP G RG TPR
Sbjct: 211 SASEHST--TEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARS--GPSARG--TPR 264
Query: 318 ARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEPLSSRRT 377
A + +P P Q P P+++ P +A G ++S PL++
Sbjct: 265 APAHPS--QPKPKGLQALRP--------PQVTPPRKDAAPALGPLSSS-----PLATPSP 309
Query: 378 KAPSEGRDSPSSPATSTHYLDRESGLGSVNSHPSRSPYNWSPPSPSVPP 426
A + + P+ PAT S + +P +PPSPS PP
Sbjct: 310 SAALQSQAPPTLPATPH---------SSSLTCQLATPLPLAPPSPSAPP 349
Score = 37.4 bits (85), Expect = 0.026
Identities = 99/425 (23%), Positives = 129/425 (30%), Gaps = 79/425 (18%)
Query: 6 RFTPHPRTPAPGC------PEVAP-QPEGTDAPGPAVCSPTARAPPPILPAPQRPPTRAR 58
R HP P P P+V P + + A GP SP A P Q PPT
Sbjct: 264 RAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPT--- 320
Query: 59 EWEGAAWAAGATGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRR 118
L A P S L T +P P+P AP + + P
Sbjct: 321 -----------------LPATPHSSSLTCQLATPLPLAP-PSPSAPPSLQTLPSPPATPP 362
Query: 119 RRAPSSAGK-----------RPAAAARAAPPRQRSLARCLPRSVGSCVRPSVGP----SL 163
+A +S G P + A PP Q A LP P+ P +
Sbjct: 363 SQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLAT 422
Query: 164 PRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAE 223
P H + P PPP P SPP + P++ S P P +
Sbjct: 423 PSPQAPNALAVHLLQAPF-SPPPSPPVQAPFSPP-ASPPVSPSATPPSQAPPSLAAPPLQ 480
Query: 224 RSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQG-CALGSPPIPAGPAAPGRAG 282
P+ P P S S + + Q AL +PP+ A P+ P
Sbjct: 481 VPPSPPASP-PMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPP---- 535
Query: 283 ERRAARQWRKRGGGPGVSPREGAQGEGVRGGVTPRARGSSTCLRP-------SPATWQGG 335
PG +P + + TP + P PA+
Sbjct: 536 -----------ASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQ 584
Query: 336 APYRA------IFAAGPRLSAPSAEAEEVPGGH----TASNPTYEPLSSRRTKAPSEGRD 385
AP R +GPRL+ A P T S P SS T P E R
Sbjct: 585 APRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRG 644
Query: 386 SPSSP 390
S P
Sbjct: 645 YDSGP 649
Score = 37.4 bits (85), Expect = 0.026
Identities = 98/393 (24%), Positives = 121/393 (30%), Gaps = 70/393 (17%)
Query: 11 PRTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPP----PILPAPQRPPTRAREWEGAAWA 66
P +P P P AP P +P ++APP P L P PP A
Sbjct: 439 PFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPP 498
Query: 67 AGATGVGAA---LLALPGSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRAPS 123
A AA LA P + + +A P P P G P +P
Sbjct: 499 PQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFP---GQAPFSPSASLPMSPL 555
Query: 124 SAGKRPAAAARAAPPRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPK 183
+ A AAP Q +P S P P+L RR P P
Sbjct: 556 ATPPPQAPPVLAAPLLQ------VPPS------PPASPTLQAP----------RRPPTPG 593
Query: 184 PPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEV 243
P S S PRL L AP P P R P S G ++
Sbjct: 594 PDT------SVSGPRLTLAL----APGPPPPPSRS---------------PSSTLSGPDL 628
Query: 244 VGARRRRGGEERRVRG---RRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVS 300
G +RG +G A SPP A AA A R G PG
Sbjct: 629 AGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAP 688
Query: 301 -PREGAQGEGVRGGV--------TPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAP 351
P A G G G+ A + L P P+ G A AG +P
Sbjct: 689 LPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSP 748
Query: 352 -SAEAEEVPGGHTASNPTYEPLSSRRTKAPSEG 383
A E+P G ++ LS A +EG
Sbjct: 749 KQARLGELPLGALQASVVQHLLSRTLLLAAAEG 781
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 55.8 bits (133), Expect = 7e-08
Identities = 64/244 (26%), Positives = 86/244 (35%), Gaps = 17/244 (6%)
Query: 9 PHPRTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPILPAPQRP-----PTRAREWEGA 63
P PR P+ P P + P P SP R PP+ P++P P G
Sbjct: 170 PPPRPDVGSKPDSIPPPVPS-TPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGT 228
Query: 64 AWAAGATGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRA--RGSCGRE----PGPR 117
A G+ + P S R P R P P P R S RE P P+
Sbjct: 229 ALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQ 288
Query: 118 RRRAPSSAGKRPAAAARAAPPRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHC- 176
+ P + RP+A+++A PP P S P LP+R+
Sbjct: 289 NNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPL 348
Query: 177 ----RRRPLPKPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLP 232
R PLP PP +P PP + PL S + R + P+ G+
Sbjct: 349 PSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVD 408
Query: 233 LPRS 236
PRS
Sbjct: 409 SPRS 412
Score = 38.5 bits (88), Expect = 0.012
Identities = 69/276 (25%), Positives = 94/276 (34%), Gaps = 50/276 (18%)
Query: 9 PHPRTPAPGCPEV------APQPEGTDAPGPAVCSPTA--RAPPPILPAPQRPPTRAREW 60
P P P P + P P+ P P+ P+A +APPP P P RP
Sbjct: 265 PPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPP-PPPSRP------- 316
Query: 61 EGAAWAAGATGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRR 120
G + + + RL + L+ ++P P P R+ G P P R
Sbjct: 317 -------GPPPLPPSSSGNDETPRLPQRNLSLSSSTP-PLPSPGRS----GPLPPPPSER 364
Query: 121 APSSAGKRPAAAARAAPP----RQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHC 176
P P + PP R S +R LP + P LP R R
Sbjct: 365 PPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPAT----------PQLPSRSGVDSPRSG- 413
Query: 177 RRRPLPKPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRS 236
P P PP +P G+ PP + + SP R P LP P
Sbjct: 414 ---PRPPLPPDRPSAGAPPPPPPSTSIRNGFQD--SPCEDEWESRFYFHPIS-DLPPPEP 467
Query: 237 LSRGGEVVGARRRRGGEERRVRGRRQGCALGSPPIP 272
+ + ++ R E R RR+ A PPIP
Sbjct: 468 YVQTTKSYPSKLAR-NESRSGSNRRERGAPPLPPIP 502
Score = 38.1 bits (87), Expect = 0.015
Identities = 103/412 (25%), Positives = 131/412 (31%), Gaps = 59/412 (14%)
Query: 43 PPPILPAPQRPPT--RAREWEGAAWAAGATGVGAALLALPGSRRLGR-------VPLTFR 93
PPP PAP PPT A + G A L + ++L + P+ +
Sbjct: 4 PPP--PAPPPPPTFALANTEKPTLNKTEQAGRNALLSDISKGKKLKKTVTNDRSAPILDK 61
Query: 94 EASPGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAA---RAAPPRQRSLARCLPRS 150
G G G G G S G P +A P+ RS A S
Sbjct: 62 PKGAGAGGGGGGFGGGGGFGGGGGGGGGGSFGGGGPPGLGGLFQAGMPKLRSTANRDNDS 121
Query: 151 VGSCVRPSVGPSLPRRHCRRHCR--CHCRRRPLPKP----PPLQPRLGSASPPRLAAPLA 204
GS RP + P R + R P+P P P +P+ PPR P
Sbjct: 122 GGS--RPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPR---PDV 176
Query: 205 GSRAPSLSPFPRRCRRRAERSPAGHGLPL----PRSLSRGGEVVGARRRRGGEERRVRGR 260
GS+ S+ P R + SP G P PR S G RG R
Sbjct: 177 GSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIR 236
Query: 261 RQGCALGSP--PIPAGPAAPGRAGERRAARQWRKRGGGPGVS----PREGAQGEGVRGGV 314
+ + SP P P P RA + + G P + P Q
Sbjct: 237 QSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPS 296
Query: 315 TPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEPLSS 374
TPR SS P P + G P P S+ + E +P + + LSS
Sbjct: 297 TPRPSASSQAPPPPPPPSRPGPP------PLPPSSSGNDETPRLPQRNLS-------LSS 343
Query: 375 RRTKAPSEGRDSPSSPATSTHYLDRESGLGSVNSHPSRSPYNWSPPSPSVPP 426
PS GR P P S P R P S P P PP
Sbjct: 344 STPPLPSPGRSGPLPPPPSER-----------PPPPVRDPPGRSGPLPPPPP 384
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 55.8 bits (133), Expect = 7e-08
Identities = 64/244 (26%), Positives = 86/244 (35%), Gaps = 17/244 (6%)
Query: 9 PHPRTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPILPAPQRP-----PTRAREWEGA 63
P PR P+ P P + P P SP R PP+ P++P P G
Sbjct: 170 PPPRPDVGSKPDSIPPPVPS-TPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGT 228
Query: 64 AWAAGATGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRA--RGSCGRE----PGPR 117
A G+ + P S R P R P P P R S RE P P+
Sbjct: 229 ALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQ 288
Query: 118 RRRAPSSAGKRPAAAARAAPPRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHC- 176
+ P + RP+A+++A PP P S P LP+R+
Sbjct: 289 NNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPL 348
Query: 177 ----RRRPLPKPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLP 232
R PLP PP +P PP + PL S + R + P+ G+
Sbjct: 349 PSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVD 408
Query: 233 LPRS 236
PRS
Sbjct: 409 SPRS 412
Score = 38.5 bits (88), Expect = 0.012
Identities = 69/276 (25%), Positives = 94/276 (34%), Gaps = 50/276 (18%)
Query: 9 PHPRTPAPGCPEV------APQPEGTDAPGPAVCSPTA--RAPPPILPAPQRPPTRAREW 60
P P P P + P P+ P P+ P+A +APPP P P RP
Sbjct: 265 PPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPP-PPPSRP------- 316
Query: 61 EGAAWAAGATGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRR 120
G + + + RL + L+ ++P P P R+ G P P R
Sbjct: 317 -------GPPPLPPSSSGNDETPRLPQRNLSLSSSTP-PLPSPGRS----GPLPPPPSER 364
Query: 121 APSSAGKRPAAAARAAPP----RQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHC 176
P P + PP R S +R LP + P LP R R
Sbjct: 365 PPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPAT----------PQLPSRSGVDSPRSG- 413
Query: 177 RRRPLPKPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRS 236
P P PP +P G+ PP + + SP R P LP P
Sbjct: 414 ---PRPPLPPDRPSAGAPPPPPPSTSIRNGFQD--SPCEDEWESRFYFHPIS-DLPPPEP 467
Query: 237 LSRGGEVVGARRRRGGEERRVRGRRQGCALGSPPIP 272
+ + ++ R E R RR+ A PPIP
Sbjct: 468 YVQTTKSYPSKLAR-NESRSGSNRRERGAPPLPPIP 502
Score = 38.1 bits (87), Expect = 0.015
Identities = 103/412 (25%), Positives = 131/412 (31%), Gaps = 59/412 (14%)
Query: 43 PPPILPAPQRPPT--RAREWEGAAWAAGATGVGAALLALPGSRRLGR-------VPLTFR 93
PPP PAP PPT A + G A L + ++L + P+ +
Sbjct: 4 PPP--PAPPPPPTFALANTEKPTLNKTEQAGRNALLSDISKGKKLKKTVTNDRSAPILDK 61
Query: 94 EASPGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAA---RAAPPRQRSLARCLPRS 150
G G G G G S G P +A P+ RS A S
Sbjct: 62 PKGAGAGGGGGGFGGGGGFGGGGGGGGGGSFGGGGPPGLGGLFQAGMPKLRSTANRDNDS 121
Query: 151 VGSCVRPSVGPSLPRRHCRRHCR--CHCRRRPLPKP----PPLQPRLGSASPPRLAAPLA 204
GS RP + P R + R P+P P P +P+ PPR P
Sbjct: 122 GGS--RPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPR---PDV 176
Query: 205 GSRAPSLSPFPRRCRRRAERSPAGHGLPL----PRSLSRGGEVVGARRRRGGEERRVRGR 260
GS+ S+ P R + SP G P PR S G RG R
Sbjct: 177 GSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIR 236
Query: 261 RQGCALGSP--PIPAGPAAPGRAGERRAARQWRKRGGGPGVS----PREGAQGEGVRGGV 314
+ + SP P P P RA + + G P + P Q
Sbjct: 237 QSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPS 296
Query: 315 TPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEPLSS 374
TPR SS P P + G P P S+ + E +P + + LSS
Sbjct: 297 TPRPSASSQAPPPPPPPSRPGPP------PLPPSSSGNDETPRLPQRNLS-------LSS 343
Query: 375 RRTKAPSEGRDSPSSPATSTHYLDRESGLGSVNSHPSRSPYNWSPPSPSVPP 426
PS GR P P S P R P S P P PP
Sbjct: 344 STPPLPSPGRSGPLPPPPSER-----------PPPPVRDPPGRSGPLPPPPP 384
>gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 55.1 bits (131), Expect = 1e-07
Identities = 80/273 (29%), Positives = 96/273 (35%), Gaps = 68/273 (24%)
Query: 3 RGQRFTPHPRTPAPGCPEV-APQPEGTDAPGPAVCS-PTARAPPPILPAP--------QR 52
RG+ T R+ G E A T AP P S P PP LPAP QR
Sbjct: 81 RGRAKTTRGRSQGAGATETSAGNSAATAAPHPTPASYPQGTISPPQLPAPRPKRFGGKQR 140
Query: 53 PPTRAREWEGAAWAAGATGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRARGSCGR 112
P R R WE A L P +LG+ P P P P R G
Sbjct: 141 PLWRIRGWETTV----------ARLPEPRVGKLGK--------GPPPRPAPPGTRCCPGA 182
Query: 113 EPGPRRRRAPSSAGKRPAAAARAAPPRQRSLAR--CLPRSVGSC---------------- 154
R A ++A A AAR P +R+ R CLP + +
Sbjct: 183 RAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPLPPTE 242
Query: 155 ------VRPSVGPSLPRRHCRR---HCRCHCRR-RPLPKPPPLQPRLGSASPPRLAAPLA 204
RP P RR +R CR HC R P PP L P + + A+ A
Sbjct: 243 FLSPRRTRPRKHPERTRRPAQRLESGCRGHCSRGAPALAPPKLSPPFPCLA--QSASRAA 300
Query: 205 GSRAPSLSPFPRRCRRRAERSPAGHG---LPLP 234
G+R +LS R R G G LPLP
Sbjct: 301 GARR-ALS------ASRGRRGLLGSGSLALPLP 326
Score = 35.0 bits (79), Expect = 0.13
Identities = 53/198 (26%), Positives = 70/198 (35%), Gaps = 36/198 (18%)
Query: 101 PGAPRARGSCGREPGPR-RRRAPSSAGKRPAAAARAAPPRQRSLARCLPRSVGSCVRPSV 159
P PR RG GP R RA ++ G+ A A + + S + ++
Sbjct: 63 PAPPRERGESSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPTPASYPQGTI 122
Query: 160 GPSLPRRHCRRHCRCHCRRRPLPK-----------PPPLQPRLGSASPPRLAAPLAGSRA 208
P P+ R R ++RPL + P P +LG PPR A P G+R
Sbjct: 123 SP--PQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPPPRPAPP--GTRC 178
Query: 209 PSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGS 268
P R + E + A GL P + R RR G R GC
Sbjct: 179 ---CPGARAAQLLREAAAAAQGLRAPAA------------RLPEPTRRAPG-RPGCL--- 219
Query: 269 PPIPAGPAAPGRAGERRA 286
P A AA RRA
Sbjct: 220 -PTAAAAAADALWRSRRA 236
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.134 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,548,306
Number of Sequences: 37866
Number of extensions: 2018479
Number of successful extensions: 24968
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 258
Number of HSP's successfully gapped in prelim test: 2110
Number of HSP's that attempted gapping in prelim test: 14391
Number of HSP's gapped (non-prelim): 9738
length of query: 426
length of database: 18,247,518
effective HSP length: 105
effective length of query: 321
effective length of database: 14,271,588
effective search space: 4581179748
effective search space used: 4581179748
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.