Guide to the Human Genome
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Name: AMAC1L2 Sequence: fasta or formatted (338aa) NCBI GI: 16876447
Description:

acyl-malonyl condensing enzyme

Referenced in:

Fatty Acid Synthesis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         29           2
 C cysteine            4.4         15           1
 D aspartate           1.5          5           1
 E glutamate           3.0         10           2
 F phenylalanine       2.7          9           1
 G glycine            11.8         40           3
 H histidine           2.4          8           1
 I isoleucine          4.1         14           3
 K lysine              1.2          4           1
 L leucine            18.3         62           3
 M methionine          1.2          4           1
 N asparagine          1.8          6           1
 P proline             6.8         23           2
 Q glutamine           2.7          9           1
 R arginine            3.0         10           1
 S serine              8.3         28           2
 T threonine           5.0         17           2
 V valine              8.9         30           3
 W tryptophan          1.5          5           1
 Y tyrosine            3.0         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-malonyl condensing enzyme 
AMAC1L1               0.923   PREDICTED: acyl-malonyl condensing enzyme 1-like 1 [...
AMAC1                 0.903   acyl-malonyl condensing enzyme 1 
AMAC1L1               0.903   PREDICTED: acyl-malonyl condensing enzyme 1-like 1 ...
AMAC1L3               0.902   acyl-malonyl condensing enzyme 1-like 3 
TMEM22                0.192   transmembrane protein 22 
TMEM22                0.192   transmembrane protein 22 
TMEM22                0.192   transmembrane protein 22 
ABHD14A               0.011   abhydrolase domain containing 14A 
TNFSF11               0.008   tumor necrosis factor ligand superfamily, member 11 i...
LOC147710             0.008   PREDICTED: hypothetical protein LOC147710 
LOC147710             0.008   PREDICTED: hypothetical protein LOC147710 
LOC147710             0.008   PREDICTED: hypothetical protein LOC147710 
RHBDD2                0.008   rhomboid domain containing 2 isoform a 
SLC35C1               0.008   GDP-fucose transporter 1 isoform a 
SLC35C1               0.008   GDP-fucose transporter 1 isoform b 
SLC35C1               0.008   GDP-fucose transporter 1 isoform b 
C7orf34               0.008   hypothetical protein LOC135927 
LOC100292594          0.006   PREDICTED: hypothetical protein 
LOC100290955          0.006   PREDICTED: hypothetical protein XP_002346424 
LOC100288670          0.006   PREDICTED: hypothetical protein XP_002342097 
OR2A14                0.006   olfactory receptor, family 2, subfamily A, member 14...
TMEM19                0.006   transmembrane protein 19 
TBXA2R                0.005   thromboxane A2 receptor 
MFSD8                 0.005   major facilitator superfamily domain containing 8 [H...
OR13G1                0.005   olfactory receptor, family 13, subfamily G, member 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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