Guide to the Human Genome
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Name: PLAG1 Sequence: fasta or formatted (500aa) NCBI GI: 167857796
Description:

pleiomorphic adenoma gene 1 isoform a

Referenced in:

Lacrimal and Salivary Glands
Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt mRNA [500aa] pleiomorphic adenoma gene 1 isoform a
alt prot [418aa] pleiomorphic adenoma gene 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         19           2
 C cysteine            3.2         16           1
 D aspartate           5.0         25           2
 E glutamate           4.8         24           2
 F phenylalanine       4.4         22           1
 G glycine             5.4         27           2
 H histidine           5.6         28           2
 I isoleucine          2.6         13           1
 K lysine              8.4         42           2
 L leucine            10.2         51           2
 M methionine          2.4         12           1
 N asparagine          3.4         17           1
 P proline             6.4         32           2
 Q glutamine           5.4         27           2
 R arginine            3.6         18           2
 S serine             11.8         59           4
 T threonine           6.8         34           2
 V valine              4.2         21           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.6         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pleiomorphic adenoma gene 1 isoform a 
PLAG1                 1.000   pleiomorphic adenoma gene 1 isoform a 
PLAG1                 0.830   pleiomorphic adenoma gene 1 isoform b 
PLAGL2                0.473   pleiomorphic adenoma gene-like 2 
PLAGL1                0.348   pleiomorphic adenoma gene-like 1 isoform 2 
PLAGL1                0.348   pleiomorphic adenoma gene-like 1 isoform 2 
PLAGL1                0.348   pleiomorphic adenoma gene-like 1 isoform 2 
PLAGL1                0.348   pleiomorphic adenoma gene-like 1 isoform 2 
PLAGL1                0.348   pleiomorphic adenoma gene-like 1 isoform 2 
PLAGL1                0.271   pleiomorphic adenoma gene-like 1 isoform 1 
PLAGL1                0.271   pleiomorphic adenoma gene-like 1 isoform 1 
PLAGL1                0.271   pleiomorphic adenoma gene-like 1 isoform 1 
ZNF845                0.126   zinc finger protein 845 
ZBTB17                0.119   zinc finger and BTB domain containing 17 
ZNF107                0.119   zinc finger protein 107 
ZNF107                0.119   zinc finger protein 107 
ZNF28                 0.119   zinc finger protein 28 
ZFP112                0.119   zinc finger protein 228 isoform 1 
ZFP112                0.119   zinc finger protein 228 isoform 2 
ZNF85                 0.118   zinc finger protein 85 
ZNF99                 0.118   zinc finger protein 99 
ZNF93                 0.118   zinc finger protein 93 
ZNF782                0.117   zinc finger protein 782 
ZNF492                0.117   zinc finger protein 492 
ZNF100                0.117   zinc finger protein 100 
ZNF347                0.117   zinc finger protein 347 
ZNF808                0.117   zinc finger protein 808 
ZNF333                0.116   zinc finger protein 333 
ZNF528                0.116   zinc finger protein 528 
ZNF582                0.116   zinc finger protein 582 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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