Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PLAGL2 Sequence: fasta or formatted (496aa) NCBI GI: 4505859
Description:

pleiomorphic adenoma gene-like 2

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         39           5
 C cysteine            3.6         18           1
 D aspartate           3.4         17           1
 E glutamate           4.8         24           3
 F phenylalanine       3.4         17           2
 G glycine             6.2         31           2
 H histidine           5.4         27           1
 I isoleucine          1.0          5           1
 K lysine              6.2         31           2
 L leucine            11.5         57           2
 M methionine          3.0         15           1
 N asparagine          2.2         11           1
 P proline             9.5         47           2
 Q glutamine           5.2         26           1
 R arginine            4.6         23           2
 S serine              9.3         46           2
 T threonine           5.0         25           2
 V valine              4.4         22           2
 W tryptophan          0.4          2           1
 Y tyrosine            2.6         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pleiomorphic adenoma gene-like 2 
PLAG1                 0.472   pleiomorphic adenoma gene 1 isoform a 
PLAG1                 0.472   pleiomorphic adenoma gene 1 isoform a 
PLAG1                 0.424   pleiomorphic adenoma gene 1 isoform b 
PLAGL1                0.329   pleiomorphic adenoma gene-like 1 isoform 2 
PLAGL1                0.329   pleiomorphic adenoma gene-like 1 isoform 2 
PLAGL1                0.329   pleiomorphic adenoma gene-like 1 isoform 2 
PLAGL1                0.329   pleiomorphic adenoma gene-like 1 isoform 2 
PLAGL1                0.329   pleiomorphic adenoma gene-like 1 isoform 2 
PLAGL1                0.283   pleiomorphic adenoma gene-like 1 isoform 1 
PLAGL1                0.283   pleiomorphic adenoma gene-like 1 isoform 1 
PLAGL1                0.283   pleiomorphic adenoma gene-like 1 isoform 1 
ZNF577                0.104   zinc finger protein 577 isoform b 
ZNF577                0.104   zinc finger protein 577 isoform a 
ZNF768                0.103   zinc finger protein 768 
ZBTB17                0.099   zinc finger and BTB domain containing 17 
ZNF57                 0.099   zinc finger protein 57 
ZNF624                0.099   zinc finger protein 624 
ZNF778                0.099   zinc finger protein 778 
ZNF449                0.099   zinc finger protein 449 
ZNF99                 0.099   zinc finger protein 99 
ZNF436                0.099   zinc finger protein 436 
ZNF436                0.099   zinc finger protein 436 
ZNF568                0.098   zinc finger protein 568 
ZNF605                0.098   zinc finger protein 605 
ZNF559                0.098   zinc finger protein 559 
ZNF530                0.098   zinc finger protein 530 
ZNF93                 0.097   zinc finger protein 93 
ZNF468                0.097   zinc finger protein ZNF468 isoform 1 
ZNF468                0.097   zinc finger protein ZNF468 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press