Guide to the Human Genome
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Name: COQ4 Sequence: fasta or formatted (265aa) NCBI GI: 166795285
Description:

coenzyme Q4 homolog

Referenced in:

Oxidative Phosphorylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         23           2
 C cysteine            1.1          3           1
 D aspartate           3.8         10           2
 E glutamate           6.0         16           2
 F phenylalanine       1.9          5           2
 G glycine             7.5         20           1
 H histidine           2.6          7           2
 I isoleucine          3.4          9           1
 K lysine              1.5          4           1
 L leucine            15.5         41           2
 M methionine          3.4          9           1
 N asparagine          1.9          5           1
 P proline             7.5         20           2
 Q glutamine           4.9         13           1
 R arginine           10.2         27           2
 S serine              4.5         12           1
 T threonine           4.9         13           2
 V valine              6.4         17           2
 W tryptophan          1.1          3           1
 Y tyrosine            3.0          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coenzyme Q4 homolog 
FAM120C               0.010   hypothetical protein LOC54954 
FRY                   0.010   furry homolog 
SUPT6H                0.008   suppressor of Ty 6 homolog 
NLRP1                 0.006   NLR family, pyrin domain containing 1 isoform 2 [Homo...
NLRP1                 0.006   NLR family, pyrin domain containing 1 isoform 4 [Hom...
NLRP1                 0.006   NLR family, pyrin domain containing 1 isoform 5 [Hom...
NLRP1                 0.006   NLR family, pyrin domain containing 1 isoform 3 [Hom...
NLRP1                 0.006   NLR family, pyrin domain containing 1 isoform 1 [Hom...
GP1BA                 0.006   platelet glycoprotein Ib alpha polypeptide precurso...
LOC100293795          0.006   PREDICTED: hypothetical protein 
LOC100287397          0.006   PREDICTED: hypothetical protein 
LOC100287397          0.006   PREDICTED: hypothetical protein XP_002343164 
GRIN3B                0.006   glutamate receptor, ionotropic, N-methyl-D-aspartate...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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